Rh2BG456800

Protein of unknown function (DUF1639)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
64676467 .. 64676649
183 bp
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UTR
Exon/CDS
Intron
Rh2BG456800.1

Sequence Viewer

Length: 183 bp
ATGGTTATTGATGTGGCAGCAAAGGAGGAGAAGGACGCTGAGGTTTCGGAGGAGGGGGGATCGTCGCAGCCGGTGAGGCTATGGAATCTGAGGAAGAGGAAGGCTCCAATTGGCGGTGGTGGTGGCAAGGGGTTGAAAATTGAGGAGAGAAAGGTGAATTACTTGGACCTTCCCCAAGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

60

Amino Acids

6.55

Weight (kDa)

8.04

Isoelectric Point (pI)

75.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 114
AclWI GGATC 1 cut(s) 67
AfiI CCNNNNNNNGG 1 cut(s) 113
AgsI TTSAA 1 cut(s) 136
AlwI GGATC 1 cut(s) 67
ApeKI GCWGC 2 cut(s) 17, 67
AspS9I GGNCC 1 cut(s) 166
AsuHPI GGTGA 2 cut(s) 85, 166
AvaII GGWCC 1 cut(s) 166
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 2 cut(s) 29, 79
BglI GCCNNNNNGGC 1 cut(s) 76
BisI GCNGC 2 cut(s) 18, 68
BlsI GCNGC 2 cut(s) 19, 69
Bme18I GGWCC 1 cut(s) 166
BmgT120I GGNCC 1 cut(s) 166
BmiI GGNNCC 1 cut(s) 105
BplI GAGNNNNNCTC 2 cut(s) 88, 120
Bpu10I CCTNAGC 1 cut(s) 39
Bsc4I CCNNNNNNNGG 1 cut(s) 113
Bse118I RCCGGY 1 cut(s) 70
BseLI CCNNNNNNNGG 1 cut(s) 113
BseMII CTCAG 2 cut(s) 30, 80
BseRI GAGGAG 3 cut(s) 41, 65, 158
BseXI GCAGC 2 cut(s) 29, 79
BsiSI CCGG 1 cut(s) 71
BslI CCNNNNNNNGG 1 cut(s) 113
Bsp143I GATC 1 cut(s) 59
BspACI CCGC 1 cut(s) 114
BspCNI CTCAG 2 cut(s) 31, 81
BspLI GGNNCC 1 cut(s) 105
BspPI GGATC 1 cut(s) 67
BsrFI RCCGGY 1 cut(s) 70
BssAI RCCGGY 1 cut(s) 70
BssMI GATC 1 cut(s) 59
Bst6I CTCTTC 1 cut(s) 89
BstDEI CTNAG 2 cut(s) 39, 89
BstKTI GATC 1 cut(s) 62
BstMBI GATC 1 cut(s) 59
BstMWI GCNNNNNNNGC 1 cut(s) 76
BstV1I GCAGC 2 cut(s) 29, 79
Cfr10I RCCGGY 1 cut(s) 70
Cfr13I GGNCC 1 cut(s) 166
CseI GACGC 1 cut(s) 44
CviJI RGCY 3 cut(s) 70, 79, 104
CviKI_1 RGCY 3 cut(s) 70, 79, 104
DdeI CTNAG 2 cut(s) 39, 89
DpnI GATC 1 cut(s) 61
DpnII GATC 1 cut(s) 59
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
Eco47I GGWCC 1 cut(s) 166
FaiI YATR 2 cut(s) 82, 181
Fnu4HI GCNGC 2 cut(s) 18, 68
Fsp4HI GCNGC 2 cut(s) 18, 68
GluI GCNGC 2 cut(s) 18, 68
HapII CCGG 1 cut(s) 71
HgaI GACGC 1 cut(s) 44
HinfI GANTC 1 cut(s) 85
HpaII CCGG 1 cut(s) 71
HphI GGTGA 2 cut(s) 85, 166
Hpy188I TCNGA 2 cut(s) 49, 90
Hpy99I CGWCG 1 cut(s) 67
HpyAV CCTTC 3 cut(s) 25, 94, 179
HpyF10VI GCNNNNNNNGC 1 cut(s) 76
HpyF3I CTNAG 2 cut(s) 39, 89
Kzo9I GATC 1 cut(s) 59
LmnI GCTCC 1 cut(s) 109
LpnPI CCDG 1 cut(s) 84
Lsp1109I GCAGC 2 cut(s) 29, 79
MalI GATC 1 cut(s) 61
MboI GATC 1 cut(s) 59
MboII GAAGA 1 cut(s) 106
MfeI CAATTG 1 cut(s) 108
MluCI AATT 3 cut(s) 108, 138, 157
MnlI CCTC 8 cut(s) 19, 34, 43, 46, 69, 84, 90, 136
MspI CCGG 1 cut(s) 71
MunI CAATTG 1 cut(s) 108
MwoI GCNNNNNNNGC 1 cut(s) 76
NdeII GATC 1 cut(s) 59
NlaIV GGNNCC 1 cut(s) 105
PfeI GAWTC 1 cut(s) 85
PkrI GCNGC 2 cut(s) 19, 69
PspN4I GGNNCC 1 cut(s) 105
PspPI GGNCC 1 cut(s) 166
SatI GCNGC 2 cut(s) 18, 68
Sau3AI GATC 1 cut(s) 59
Sau96I GGNCC 1 cut(s) 166
SetI ASST 3 cut(s) 45, 156, 171
SgeI CNNG 3 cut(s) 83, 139, 175
SinI GGWCC 1 cut(s) 166
Sse9I AATT 3 cut(s) 108, 138, 157
SsiI CCGC 1 cut(s) 114
TasI AATT 3 cut(s) 108, 138, 157
TfiI GAWTC 1 cut(s) 85
TseI GCWGC 2 cut(s) 17, 67
VpaK11BI GGWCC 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.