pycom15g21080

Ankyrin repeat domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0001558
Physical Location & Seq
Reverse (-)
15094778 .. 15097625
2848 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g21080.7

Sequence Viewer

Length: 735 bp
ATGGCGGATTCTCCACGCAAAAAGTATTCACGATCCCCTTCTCCATGGAGAGCGCAGTCCAGGTCCAGGTCTAGGTCTTGGTCTAGGCCGAGGCAGAGGTCAAGATCATTGTCTAGGCCACCAAGGCAGAGGTCTCGCTCTAGAAGTCGCGGCAGATCAAGGTCCAGAAGTCCTGGCAGGGCTGCTGCTATAAATCCTGGAAATACACTGTATGTGACCGGCCTATCTACAAGGGTCTCAGAGAAGGATGTTGAAAGGCACTTTTCAAAGGAGGGAAAGGTAGCTTCATGCTTTCTTGTTATGGAGCCTCGGACTCGGATTTCTCGTGGTTTTGCCTTCATTACGATGGACTCAGTTGAAGATGCTGAACGGTGCATTAAAAATCTCAATCAGTCAGTTCTGGAAGGTCGATACATAACTGTTGAGAGGTCCCGGAGGAAGCGACCAAGAACGCCAACACCTGGGCATTATCTTGGGTTGAAAAATACTAGAGACTATGGCTACCGAGGTGATCGTGATCGAGATCGTGAACGTGATAGTGATCGTGGTAGGTACCGCGGGGGCTCAGGTCGTGATGACTATGGATATAGGAGGTCTCCAAGGCGCTCACCCTATAGAGGTGGCCGTGATTATTCTCCAAGGGGCGGTTCACCTTATGGCGGAAGATCAAGAAGAGAGAGGTCTTATTCTCCCTATGGAAGCCCGGAAAGAAAGTATGCTCGTGGCTCTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
Ank_2 Ank_4 Ank_5 RRM_1

Protein Analysis

245

Amino Acids

28.35

Weight (kDa)

11.55

Isoelectric Point (pI)

87.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 552
AccB1I GGYRCC 1 cut(s) 552
AccB7I CCANNNNNTGG 1 cut(s) 461
AccII CGCG 2 cut(s) 150, 558
AciI CCGC 6 cut(s) 5, 150, 556, 558, 645, 660
AclWI GGATC 1 cut(s) 27
AcoI YGGCCR 1 cut(s) 622
AfaI GTAC 1 cut(s) 554
AfiI CCNNNNNNNGG 6 cut(s) 66, 72, 461, 617, 644, 659
AgsI TTSAA 4 cut(s) 254, 267, 359, 481
AjnI CCWGG 5 cut(s) 59, 65, 172, 196, 460
AjuI GAANNNNNNNTTGG 2 cut(s) 631, 663
AluBI AGCT 1 cut(s) 284
AluI AGCT 1 cut(s) 284
Alw26I GTCTC 4 cut(s) 138, 241, 486, 600
AlwI GGATC 1 cut(s) 27
AoxI GGCC 4 cut(s) 86, 116, 220, 622
ApeKI GCWGC 2 cut(s) 182, 185
Asp718I GGTACC 1 cut(s) 552
AspLEI GCGC 2 cut(s) 55, 606
AspS9I GGNCC 3 cut(s) 63, 162, 429
AsuC2I CCSGG 2 cut(s) 433, 704
AsuHPI GGTGA 3 cut(s) 521, 600, 642
AvaII GGWCC 3 cut(s) 63, 162, 429
BanI GGYRCC 1 cut(s) 552
BanII GRGCYC 1 cut(s) 566
BauI CACGAG 2 cut(s) 324, 720
BbvI GCAGC 2 cut(s) 169, 172
BccI CCATC 1 cut(s) 340
BceAI ACGGC 1 cut(s) 609
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 5 cut(s) 61, 67, 174, 198, 462
BcnI CCSGG 2 cut(s) 433, 704
BcoDI GTCTC 4 cut(s) 138, 241, 486, 600
BfaI CTAG 6 cut(s) 72, 84, 114, 141, 489, 729
BfmI CTRYAG 1 cut(s) 613
BfoI RGCGCY 1 cut(s) 607
BglI GCCNNNNNGGC 1 cut(s) 124
BisI GCNGC 3 cut(s) 151, 183, 186
BlsI GCNGC 3 cut(s) 152, 184, 187
Bme1390I CCNGG 7 cut(s) 61, 67, 174, 198, 433, 462, 704
Bme18I GGWCC 3 cut(s) 63, 162, 429
BmgT120I GGNCC 3 cut(s) 63, 162, 429
BmiI GGNNCC 3 cut(s) 306, 431, 554
BmrFI CCNGG 7 cut(s) 61, 67, 174, 198, 433, 462, 704
BmsI GCATC 1 cut(s) 352
Bpu10I CCTNAGC 1 cut(s) 565
BpuMI CCSGG 2 cut(s) 433, 704
BsaBI GATNNNNATC 3 cut(s) 516, 522, 540
BsaI GGTCTC 3 cut(s) 138, 241, 600
BsaJI CCNNGG 9 cut(s) 44, 89, 122, 308, 461, 505, 556, 599, 638
Bsc4I CCNNNNNNNGG 6 cut(s) 66, 72, 461, 617, 644, 659
Bse118I RCCGGY 1 cut(s) 218
Bse8I GATNNNNATC 3 cut(s) 516, 522, 540
BseBI CCWGG 5 cut(s) 61, 67, 174, 198, 462
BseDI CCNNGG 9 cut(s) 44, 89, 122, 308, 461, 505, 556, 599, 638
BseGI GGATG 1 cut(s) 253
BseJI GATNNNNATC 3 cut(s) 516, 522, 540
BseLI CCNNNNNNNGG 6 cut(s) 66, 72, 461, 617, 644, 659
BseMII CTCAG 3 cut(s) 252, 366, 579
BseXI GCAGC 2 cut(s) 169, 172
Bsh1236I CGCG 2 cut(s) 150, 558
BshFI GGCC 4 cut(s) 88, 118, 222, 624
BshNI GGYRCC 1 cut(s) 552
BsiSI CCGG 3 cut(s) 219, 433, 704
BslFI GGGAC 1 cut(s) 415
BslI CCNNNNNNNGG 6 cut(s) 66, 72, 461, 617, 644, 659
BsmAI GTCTC 4 cut(s) 138, 241, 486, 600
BsmFI GGGAC 1 cut(s) 415
BsnI GGCC 4 cut(s) 88, 118, 222, 624
Bso31I GGTCTC 3 cut(s) 138, 241, 600
Bsp1286I GDGCHC 1 cut(s) 566
Bsp143I GATC 8 cut(s) 32, 104, 155, 511, 517, 523, 541, 665
Bsp19I CCATGG 1 cut(s) 44
BspACI CCGC 6 cut(s) 5, 150, 556, 558, 645, 660
BspANI GGCC 4 cut(s) 88, 118, 222, 624
BspCNI CTCAG 3 cut(s) 251, 365, 578
BspFNI CGCG 2 cut(s) 150, 558
BspLI GGNNCC 3 cut(s) 306, 431, 554
BspPI GGATC 1 cut(s) 27
BspT107I GGYRCC 1 cut(s) 552
BspTNI GGTCTC 3 cut(s) 138, 241, 600
BsrFI RCCGGY 1 cut(s) 218
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 9 cut(s) 44, 89, 122, 308, 461, 505, 556, 599, 638
BssMI GATC 8 cut(s) 32, 104, 155, 511, 517, 523, 541, 665
BssSI CACGAG 2 cut(s) 324, 720
BssT1I CCWWGG 4 cut(s) 44, 122, 599, 638
Bst2BI CACGAG 2 cut(s) 324, 720
Bst2UI CCWGG 5 cut(s) 61, 67, 174, 198, 462
Bst4CI ACNGT 3 cut(s) 210, 372, 421
Bst6I CTCTTC 1 cut(s) 667
BstDEI CTNAG 3 cut(s) 238, 352, 565
BstDSI CCRYGG 2 cut(s) 44, 556
BstF5I GGATG 1 cut(s) 253
BstFNI CGCG 2 cut(s) 150, 558
BstH2I RGCGCY 1 cut(s) 607
BstHHI GCGC 2 cut(s) 55, 606
BstKTI GATC 8 cut(s) 35, 107, 158, 514, 520, 526, 544, 668
BstMAI GTCTC 4 cut(s) 138, 241, 486, 600
BstMBI GATC 8 cut(s) 32, 104, 155, 511, 517, 523, 541, 665
BstMWI GCNNNNNNNGC 1 cut(s) 124
BstNI CCWGG 5 cut(s) 61, 67, 174, 198, 462
BstSCI CCNGG 7 cut(s) 59, 65, 172, 196, 431, 460, 702
BstSFI CTRYAG 1 cut(s) 613
BstUI CGCG 2 cut(s) 150, 558
BstV1I GCAGC 2 cut(s) 169, 172
BsuRI GGCC 4 cut(s) 88, 118, 222, 624
BtgI CCRYGG 2 cut(s) 44, 556
BtsCI GGATG 1 cut(s) 253
BtsIMutI CAGTG 1 cut(s) 206
CfoI GCGC 2 cut(s) 55, 606
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 3 cut(s) 63, 162, 429
Cfr42I CCGCGG 1 cut(s) 559
Csp6I GTAC 1 cut(s) 553
CviAII CATG 2 cut(s) 45, 288
CviQI GTAC 1 cut(s) 553
DdeI CTNAG 3 cut(s) 238, 352, 565
DpnI GATC 8 cut(s) 34, 106, 157, 513, 519, 525, 543, 667
DpnII GATC 8 cut(s) 32, 104, 155, 511, 517, 523, 541, 665
EaeI YGGCCR 1 cut(s) 622
Eam1104I CTCTTC 1 cut(s) 667
EarI CTCTTC 1 cut(s) 667
EciI GGCGGA 2 cut(s) 20, 675
Eco130I CCWWGG 4 cut(s) 44, 122, 599, 638
Eco24I GRGCYC 1 cut(s) 566
Eco31I GGTCTC 3 cut(s) 138, 241, 600
Eco47I GGWCC 3 cut(s) 63, 162, 429
EcoO109I RGGNCCY 1 cut(s) 429
EcoRII CCWGG 5 cut(s) 59, 65, 172, 196, 460
EcoT14I CCWWGG 4 cut(s) 44, 122, 599, 638
EcoT38I GRGCYC 1 cut(s) 566
ErhI CCWWGG 4 cut(s) 44, 122, 599, 638
FaeI CATG 2 cut(s) 48, 291
FaqI GGGAC 1 cut(s) 415
FatI CATG 2 cut(s) 44, 287
FauI CCCGC 1 cut(s) 551
Fnu4HI GCNGC 3 cut(s) 151, 183, 186
FokI GGATG 1 cut(s) 260
FriOI GRGCYC 1 cut(s) 566
Fsp4HI GCNGC 3 cut(s) 151, 183, 186
FspBI CTAG 6 cut(s) 72, 84, 114, 141, 489, 729
GlaI GCGC 2 cut(s) 54, 605
GluI GCNGC 3 cut(s) 151, 183, 186
HaeII RGCGCY 1 cut(s) 607
HaeIII GGCC 4 cut(s) 88, 118, 222, 624
HapII CCGG 3 cut(s) 219, 433, 704
HhaI GCGC 2 cut(s) 55, 606
Hin1II CATG 2 cut(s) 48, 291
Hin6I GCGC 2 cut(s) 53, 604
HinP1I GCGC 2 cut(s) 53, 604
HinfI GANTC 3 cut(s) 8, 313, 350
HpaII CCGG 3 cut(s) 219, 433, 704
HphI GGTGA 3 cut(s) 521, 600, 642
Hpy166II GTNNAC 2 cut(s) 530, 650
Hpy188I TCNGA 3 cut(s) 241, 312, 318
Hpy8I GTNNAC 2 cut(s) 530, 650
HpyAV CCTTC 4 cut(s) 48, 238, 346, 398
HpyCH4III ACNGT 3 cut(s) 210, 372, 421
HpyCH4IV ACGT 1 cut(s) 532
HpyCH4V TGCA 1 cut(s) 375
HpyF10VI GCNNNNNNNGC 1 cut(s) 124
HpyF3I CTNAG 3 cut(s) 238, 352, 565
HpySE526I ACGT 1 cut(s) 532
Hsp92II CATG 2 cut(s) 48, 291
HspAI GCGC 2 cut(s) 53, 604
KpnI GGTACC 1 cut(s) 556
KspI CCGCGG 1 cut(s) 559
Kzo9I GATC 8 cut(s) 32, 104, 155, 511, 517, 523, 541, 665
LmnI GCTCC 1 cut(s) 304
Lsp1109I GCAGC 2 cut(s) 169, 172
LweI GCATC 1 cut(s) 352
MaeI CTAG 6 cut(s) 72, 84, 114, 141, 489, 729
MaeII ACGT 1 cut(s) 532
MaeIII GTNAC 1 cut(s) 214
MalI GATC 8 cut(s) 34, 106, 157, 513, 519, 525, 543, 667
MboI GATC 8 cut(s) 32, 104, 155, 511, 517, 523, 541, 665
MboII GAAGA 3 cut(s) 371, 675, 684
MhlI GDGCHC 1 cut(s) 566
MlyI GAGTC 2 cut(s) 307, 344
MseI TTAA 1 cut(s) 378
MslI CAYNNNNRTG 1 cut(s) 344
MspA1I CMGCKG 1 cut(s) 558
MspI CCGG 3 cut(s) 219, 433, 704
MspR9I CCNGG 7 cut(s) 61, 67, 174, 198, 433, 462, 704
MvaI CCWGG 5 cut(s) 61, 67, 174, 198, 462
MvnI CGCG 2 cut(s) 150, 558
MwoI GCNNNNNNNGC 1 cut(s) 124
NciI CCSGG 2 cut(s) 433, 704
NcoI CCATGG 1 cut(s) 44
NdeII GATC 8 cut(s) 32, 104, 155, 511, 517, 523, 541, 665
NlaIII CATG 2 cut(s) 48, 291
NlaIV GGNNCC 3 cut(s) 306, 431, 554
NmeAIII GCCGAG 1 cut(s) 114
NmuCI GTSAC 1 cut(s) 214
PcsI WCGNNNNNNNCGW 1 cut(s) 322
PfeI GAWTC 1 cut(s) 8
PflMI CCANNNNNTGG 1 cut(s) 461
PfoI TCCNGGA 2 cut(s) 196, 431
PkrI GCNGC 3 cut(s) 152, 184, 187
PleI GAGTC 2 cut(s) 307, 344
PpsI GAGTC 2 cut(s) 307, 344
PpuMI RGGWCCY 1 cut(s) 429
Psp5II RGGWCCY 1 cut(s) 429
Psp6I CCWGG 5 cut(s) 59, 65, 172, 196, 460
PspGI CCWGG 5 cut(s) 59, 65, 172, 196, 460
PspN4I GGNNCC 3 cut(s) 306, 431, 554
PspPI GGNCC 3 cut(s) 63, 162, 429
PspPPI RGGWCCY 1 cut(s) 429
RsaI GTAC 1 cut(s) 554
RsaNI GTAC 1 cut(s) 553
RseI CAYNNNNRTG 1 cut(s) 344
SacII CCGCGG 1 cut(s) 559
SaqAI TTAA 1 cut(s) 378
SatI GCNGC 3 cut(s) 151, 183, 186
Sau3AI GATC 8 cut(s) 32, 104, 155, 511, 517, 523, 541, 665
Sau96I GGNCC 3 cut(s) 63, 162, 429
SchI GAGTC 2 cut(s) 307, 344
ScrFI CCNGG 7 cut(s) 61, 67, 174, 198, 433, 462, 704
SduI GDGCHC 1 cut(s) 566
SfaNI GCATC 1 cut(s) 352
SfcI CTRYAG 1 cut(s) 613
Sfr303I CCGCGG 1 cut(s) 559
SgrBI CCGCGG 1 cut(s) 559
SinI GGWCC 3 cut(s) 63, 162, 429
SmiMI CAYNNNNRTG 1 cut(s) 344
SsiI CCGC 6 cut(s) 5, 150, 556, 558, 645, 660
SspMI CTAG 6 cut(s) 72, 84, 114, 141, 489, 729
StyD4I CCNGG 7 cut(s) 59, 65, 172, 196, 431, 460, 702
StyI CCWWGG 4 cut(s) 44, 122, 599, 638
TaaI ACNGT 3 cut(s) 210, 372, 421
TaiI ACGT 1 cut(s) 535
TaqI TCGA 2 cut(s) 409, 520
TauI GCSGC 1 cut(s) 153
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 1 cut(s) 378
Tru9I TTAA 1 cut(s) 378
TscAI CASTG 1 cut(s) 213
TseFI GTSAC 1 cut(s) 214
TseI GCWGC 2 cut(s) 182, 185
Tsp45I GTSAC 1 cut(s) 214
TspDTI ATGAA 2 cut(s) 276, 328
TspRI CASTG 1 cut(s) 213
Van91I CCANNNNNTGG 1 cut(s) 461
VpaK11BI GGWCC 3 cut(s) 63, 162, 429
XbaI TCTAGA 2 cut(s) 140, 728
XspI CTAG 6 cut(s) 72, 84, 114, 141, 489, 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.