Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 306 |
| AatII | GACGTC | 1 cut(s) | 1434 |
| Acc36I | ACCTGC | 2 cut(s) | 55, 306 |
| AccB1I | GGYRCC | 1 cut(s) | 1456 |
| AccII | CGCG | 4 cut(s) | 489, 777, 1318, 1332 |
| AccIII | TCCGGA | 1 cut(s) | 74 |
| AciI | CCGC | 1 cut(s) | 268 |
| AclWI | GGATC | 4 cut(s) | 904, 963, 1576, 1589 |
| AcsI | RAATTY | 3 cut(s) | 154, 644, 788 |
| AcuI | CTGAAG | 1 cut(s) | 1188 |
| AcyI | GRCGYC | 1 cut(s) | 1431 |
| AfaI | GTAC | 5 cut(s) | 45, 1022, 1209, 1614, 1699 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 102, 564, 565, 595 |
| AgsI | TTSAA | 7 cut(s) | 159, 836, 943, 1110, 1236, 1496, 1758 |
| AjnI | CCWGG | 2 cut(s) | 353, 808 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1618, 1650 |
| AleI | CACNNNNGTG | 1 cut(s) | 300 |
| Alw21I | GWGCWC | 1 cut(s) | 1060 |
| Alw26I | GTCTC | 4 cut(s) | 76, 1226, 1352, 1479 |
| AlwI | GGATC | 4 cut(s) | 904, 963, 1576, 1589 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 47, 1592 |
| Ama87I | CYCGRG | 1 cut(s) | 1053 |
| Aor13HI | TCCGGA | 1 cut(s) | 74 |
| AoxI | GGCC | 1 cut(s) | 1191 |
| ApeKI | GCWGC | 7 cut(s) | 446, 827, 1268, 1325, 1349, 1534, 1592 |
| ApoI | RAATTY | 3 cut(s) | 154, 644, 788 |
| AspA2I | CCTAGG | 1 cut(s) | 589 |
| AspLEI | GCGC | 2 cut(s) | 489, 1318 |
| AspS9I | GGNCC | 3 cut(s) | 230, 1192, 1501 |
| AsuC2I | CCSGG | 2 cut(s) | 949, 1174 |
| AsuHPI | GGTGA | 6 cut(s) | 287, 343, 562, 682, 892, 950 |
| AsuII | TTCGAA | 4 cut(s) | 198, 1046, 1080, 1152 |
| AvaI | CYCGRG | 1 cut(s) | 1053 |
| AvaII | GGWCC | 2 cut(s) | 230, 1501 |
| AvrII | CCTAGG | 1 cut(s) | 589 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 44, 77 |
| BamHI | GGATCC | 1 cut(s) | 1581 |
| BanI | GGYRCC | 1 cut(s) | 1456 |
| BanII | GRGCYC | 2 cut(s) | 934, 1060 |
| BbsI | GAAGAC | 2 cut(s) | 695, 931 |
| Bbv12I | GWGCWC | 1 cut(s) | 1060 |
| BbvI | GCAGC | 7 cut(s) | 458, 814, 1255, 1312, 1361, 1546, 1579 |
| BccI | CCATC | 4 cut(s) | 280, 499, 589, 745 |
| BciT130I | CCWGG | 2 cut(s) | 355, 810 |
| BciVI | GTATCC | 1 cut(s) | 1638 |
| BcnI | CCSGG | 2 cut(s) | 949, 1174 |
| BcoDI | GTCTC | 4 cut(s) | 76, 1226, 1352, 1479 |
| BfaI | CTAG | 6 cut(s) | 537, 590, 1292, 1346, 1484, 1518 |
| BfmI | CTRYAG | 1 cut(s) | 1269 |
| BfuAI | ACCTGC | 2 cut(s) | 55, 306 |
| BfuI | GTATCC | 1 cut(s) | 1638 |
| BisI | GCNGC | 7 cut(s) | 447, 828, 1269, 1326, 1350, 1535, 1593 |
| BlnI | CCTAGG | 1 cut(s) | 589 |
| BlsI | GCNGC | 7 cut(s) | 448, 829, 1270, 1327, 1351, 1536, 1594 |
| BmcAI | AGTACT | 1 cut(s) | 1209 |
| Bme1390I | CCNGG | 4 cut(s) | 355, 810, 949, 1174 |
| Bme18I | GGWCC | 2 cut(s) | 230, 1501 |
| BmeT110I | CYCGRG | 1 cut(s) | 1053 |
| BmgT120I | GGNCC | 3 cut(s) | 230, 1192, 1501 |
| BmiI | GGNNCC | 5 cut(s) | 232, 1297, 1458, 1502, 1583 |
| BmrFI | CCNGG | 4 cut(s) | 355, 810, 949, 1174 |
| BmrI | ACTGGG | 2 cut(s) | 1536, 1580 |
| BmsI | GCATC | 1 cut(s) | 357 |
| BmuI | ACTGGG | 2 cut(s) | 1536, 1580 |
| BpiI | GAAGAC | 2 cut(s) | 695, 931 |
| BpmI | CTGGAG | 2 cut(s) | 301, 1208 |
| Bpu14I | TTCGAA | 4 cut(s) | 198, 1046, 1080, 1152 |
| BpuEI | CTTGAG | 1 cut(s) | 1157 |
| BpuMI | CCSGG | 2 cut(s) | 949, 1174 |
| BsaAI | YACGTR | 1 cut(s) | 1552 |
| BsaHI | GRCGYC | 1 cut(s) | 1431 |
| BsaI | GGTCTC | 1 cut(s) | 1352 |
| BsaJI | CCNNGG | 7 cut(s) | 96, 234, 589, 961, 1452, 1558, 1683 |
| BsaWI | WCCGGW | 1 cut(s) | 74 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1042, 1072 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 102, 564, 565, 595 |
| Bse118I | RCCGGY | 4 cut(s) | 344, 572, 1298, 1392 |
| Bse1I | ACTGG | 4 cut(s) | 998, 1362, 1531, 1586 |
| Bse3DI | GCAATG | 3 cut(s) | 36, 222, 327 |
| BseAI | TCCGGA | 1 cut(s) | 74 |
| BseBI | CCWGG | 2 cut(s) | 355, 810 |
| BseDI | CCNNGG | 7 cut(s) | 96, 234, 589, 961, 1452, 1558, 1683 |
| BseGI | GGATG | 2 cut(s) | 261, 600 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 102, 564, 565, 595 |
| BseMI | GCAATG | 3 cut(s) | 36, 222, 327 |
| BseNI | ACTGG | 4 cut(s) | 998, 1362, 1531, 1586 |
| BseRI | GAGGAG | 2 cut(s) | 313, 981 |
| BseXI | GCAGC | 7 cut(s) | 458, 814, 1255, 1312, 1361, 1546, 1579 |
| BsgI | GTGCAG | 2 cut(s) | 1104, 1578 |
| Bsh1236I | CGCG | 4 cut(s) | 489, 777, 1318, 1332 |
| BshFI | GGCC | 1 cut(s) | 1193 |
| BshNI | GGYRCC | 1 cut(s) | 1456 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1060 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1053 |
| BsiSI | CCGG | 8 cut(s) | 75, 345, 573, 948, 1173, 1190, 1299, 1393 |
| BslFI | GGGAC | 1 cut(s) | 1644 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 102, 564, 565, 595 |
| BsmAI | GTCTC | 4 cut(s) | 76, 1226, 1352, 1479 |
| BsmFI | GGGAC | 1 cut(s) | 1644 |
| BsnI | GGCC | 1 cut(s) | 1193 |
| Bso31I | GGTCTC | 1 cut(s) | 1352 |
| BsoBI | CYCGRG | 1 cut(s) | 1053 |
| Bsp119I | TTCGAA | 4 cut(s) | 198, 1046, 1080, 1152 |
| Bsp1286I | GDGCHC | 2 cut(s) | 934, 1060 |
| Bsp13I | TCCGGA | 1 cut(s) | 74 |
| Bsp1407I | TGTACA | 1 cut(s) | 1020 |
| Bsp143I | GATC | 3 cut(s) | 909, 955, 1581 |
| Bsp19I | CCATGG | 3 cut(s) | 96, 234, 1452 |
| Bsp68I | TCGCGA | 1 cut(s) | 777 |
| BspACI | CCGC | 1 cut(s) | 268 |
| BspANI | GGCC | 1 cut(s) | 1193 |
| BspEI | TCCGGA | 1 cut(s) | 74 |
| BspFNI | CGCG | 4 cut(s) | 489, 777, 1318, 1332 |
| BspLI | GGNNCC | 5 cut(s) | 232, 1297, 1458, 1502, 1583 |
| BspMAI | CTGCAG | 1 cut(s) | 1273 |
| BspMI | ACCTGC | 2 cut(s) | 55, 306 |
| BspPI | GGATC | 4 cut(s) | 904, 963, 1576, 1589 |
| BspT104I | TTCGAA | 4 cut(s) | 198, 1046, 1080, 1152 |
| BspT107I | GGYRCC | 1 cut(s) | 1456 |
| BspTNI | GGTCTC | 1 cut(s) | 1352 |
| BsrDI | GCAATG | 3 cut(s) | 36, 222, 327 |
| BsrFI | RCCGGY | 4 cut(s) | 344, 572, 1298, 1392 |
| BsrGI | TGTACA | 1 cut(s) | 1020 |
| BsrI | ACTGG | 4 cut(s) | 998, 1362, 1531, 1586 |
| BssAI | RCCGGY | 4 cut(s) | 344, 572, 1298, 1392 |
| BssECI | CCNNGG | 7 cut(s) | 96, 234, 589, 961, 1452, 1558, 1683 |
| BssMI | GATC | 3 cut(s) | 909, 955, 1581 |
| BssNI | GRCGYC | 1 cut(s) | 1431 |
| BssT1I | CCWWGG | 7 cut(s) | 96, 234, 589, 961, 1452, 1558, 1683 |
| Bst2UI | CCWGG | 2 cut(s) | 355, 810 |
| Bst4CI | ACNGT | 3 cut(s) | 128, 1212, 1672 |
| Bst6I | CTCTTC | 1 cut(s) | 203 |
| BstACI | GRCGYC | 1 cut(s) | 1431 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 47 |
| BstAUI | TGTACA | 1 cut(s) | 1020 |
| BstBAI | YACGTR | 1 cut(s) | 1552 |
| BstBI | TTCGAA | 4 cut(s) | 198, 1046, 1080, 1152 |
| BstC8I | GCNNGC | 9 cut(s) | 34, 110, 346, 524, 528, 1330, 1390, 1394, 1716 |
| BstDEI | CTNAG | 2 cut(s) | 694, 1068 |
| BstDSI | CCRYGG | 3 cut(s) | 96, 234, 1452 |
| BstEII | GGTNACC | 3 cut(s) | 293, 568, 1301 |
| BstF5I | GGATG | 2 cut(s) | 261, 600 |
| BstFNI | CGCG | 4 cut(s) | 489, 777, 1318, 1332 |
| BstHHI | GCGC | 2 cut(s) | 489, 1318 |
| BstKTI | GATC | 3 cut(s) | 912, 958, 1584 |
| BstMAI | GTCTC | 4 cut(s) | 76, 1226, 1352, 1479 |
| BstMBI | GATC | 3 cut(s) | 909, 955, 1581 |
| BstNI | CCWGG | 2 cut(s) | 355, 810 |
| BstPI | GGTNACC | 3 cut(s) | 293, 568, 1301 |
| BstSCI | CCNGG | 4 cut(s) | 353, 808, 947, 1172 |
| BstSFI | CTRYAG | 1 cut(s) | 1269 |
| BstSNI | TACGTA | 1 cut(s) | 1552 |
| BstUI | CGCG | 4 cut(s) | 489, 777, 1318, 1332 |
| BstV1I | GCAGC | 7 cut(s) | 458, 814, 1255, 1312, 1361, 1546, 1579 |
| BstV2I | GAAGAC | 2 cut(s) | 695, 931 |
| BstX2I | RGATCY | 1 cut(s) | 1581 |
| BstYI | RGATCY | 1 cut(s) | 1581 |
| BsuI | GTATCC | 1 cut(s) | 1638 |
| BsuRI | GGCC | 1 cut(s) | 1193 |
| BtgI | CCRYGG | 3 cut(s) | 96, 234, 1452 |
| BtsCI | GGATG | 2 cut(s) | 261, 600 |
| BtsI | GCAGTG | 2 cut(s) | 672, 1344 |
| BtsIMutI | CAGTG | 3 cut(s) | 285, 672, 1344 |
| BtuMI | TCGCGA | 1 cut(s) | 777 |
| BveI | ACCTGC | 2 cut(s) | 55, 306 |
| Cac8I | GCNNGC | 9 cut(s) | 34, 110, 346, 524, 528, 1330, 1390, 1394, 1716 |
| CaiI | CAGNNNCTG | 2 cut(s) | 47, 1592 |
| CfoI | GCGC | 2 cut(s) | 489, 1318 |
| Cfr10I | RCCGGY | 4 cut(s) | 344, 572, 1298, 1392 |
| Cfr13I | GGNCC | 3 cut(s) | 230, 1192, 1501 |
| CseI | GACGC | 1 cut(s) | 1321 |
| CsiI | ACCWGGT | 2 cut(s) | 353, 808 |
| Csp6I | GTAC | 5 cut(s) | 44, 1021, 1208, 1613, 1698 |
| CviQI | GTAC | 5 cut(s) | 44, 1021, 1208, 1613, 1698 |
| DdeI | CTNAG | 2 cut(s) | 694, 1068 |
| DpnI | GATC | 3 cut(s) | 911, 957, 1583 |
| DpnII | GATC | 3 cut(s) | 909, 955, 1581 |
| Eam1104I | CTCTTC | 1 cut(s) | 203 |
| EarI | CTCTTC | 1 cut(s) | 203 |
| Ecl136II | GAGCTC | 1 cut(s) | 1058 |
| Eco105I | TACGTA | 1 cut(s) | 1552 |
| Eco130I | CCWWGG | 7 cut(s) | 96, 234, 589, 961, 1452, 1558, 1683 |
| Eco24I | GRGCYC | 2 cut(s) | 934, 1060 |
| Eco31I | GGTCTC | 1 cut(s) | 1352 |
| Eco47I | GGWCC | 2 cut(s) | 230, 1501 |
| Eco53kI | GAGCTC | 1 cut(s) | 1058 |
| Eco57I | CTGAAG | 1 cut(s) | 1188 |
| Eco88I | CYCGRG | 1 cut(s) | 1053 |
| Eco91I | GGTNACC | 3 cut(s) | 293, 568, 1301 |
| EcoICRI | GAGCTC | 1 cut(s) | 1058 |
| EcoO109I | RGGNCCY | 2 cut(s) | 230, 1501 |
| EcoO65I | GGTNACC | 3 cut(s) | 293, 568, 1301 |
| EcoRII | CCWGG | 2 cut(s) | 353, 808 |
| EcoT14I | CCWWGG | 7 cut(s) | 96, 234, 589, 961, 1452, 1558, 1683 |
| EcoT38I | GRGCYC | 2 cut(s) | 934, 1060 |
| ErhI | CCWWGG | 7 cut(s) | 96, 234, 589, 961, 1452, 1558, 1683 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 645, 677, 1488, 1520 |
| FaqI | GGGAC | 1 cut(s) | 1644 |
| FauNDI | CATATG | 1 cut(s) | 1255 |
| Fnu4HI | GCNGC | 7 cut(s) | 447, 828, 1269, 1326, 1350, 1535, 1593 |
| FokI | GGATG | 2 cut(s) | 248, 607 |
| FriOI | GRGCYC | 2 cut(s) | 934, 1060 |
| Fsp4HI | GCNGC | 7 cut(s) | 447, 828, 1269, 1326, 1350, 1535, 1593 |
| FspBI | CTAG | 6 cut(s) | 537, 590, 1292, 1346, 1484, 1518 |
| GlaI | GCGC | 2 cut(s) | 488, 1317 |
| GluI | GCNGC | 7 cut(s) | 447, 828, 1269, 1326, 1350, 1535, 1593 |
| GsuI | CTGGAG | 2 cut(s) | 301, 1208 |
| HaeIII | GGCC | 1 cut(s) | 1193 |
| HapII | CCGG | 8 cut(s) | 75, 345, 573, 948, 1173, 1190, 1299, 1393 |
| HgaI | GACGC | 1 cut(s) | 1321 |
| HhaI | GCGC | 2 cut(s) | 489, 1318 |
| Hin1I | GRCGYC | 1 cut(s) | 1431 |
| Hin6I | GCGC | 2 cut(s) | 487, 1316 |
| HinP1I | GCGC | 2 cut(s) | 487, 1316 |
| HincII | GTYRAC | 1 cut(s) | 515 |
| HindII | GTYRAC | 1 cut(s) | 515 |
| HinfI | GANTC | 2 cut(s) | 19, 1086 |
| HpaII | CCGG | 8 cut(s) | 75, 345, 573, 948, 1173, 1190, 1299, 1393 |
| HphI | GGTGA | 6 cut(s) | 287, 343, 562, 682, 892, 950 |
| Hpy166II | GTNNAC | 6 cut(s) | 305, 466, 515, 623, 1555, 1615 |
| Hpy188I | TCNGA | 4 cut(s) | 66, 121, 180, 1091 |
| Hpy188III | TCNNGA | 6 cut(s) | 16, 75, 776, 907, 1225, 1484 |
| Hpy8I | GTNNAC | 6 cut(s) | 305, 466, 515, 623, 1555, 1615 |
| Hpy99I | CGWCG | 3 cut(s) | 1337, 1436, 1439 |
| HpyCH4III | ACNGT | 3 cut(s) | 128, 1212, 1672 |
| HpyCH4IV | ACGT | 2 cut(s) | 1431, 1551 |
| HpyF3I | CTNAG | 2 cut(s) | 694, 1068 |
| HpySE526I | ACGT | 2 cut(s) | 1431, 1551 |
| Hsp92I | GRCGYC | 1 cut(s) | 1431 |
| HspAI | GCGC | 2 cut(s) | 487, 1316 |
| Kpn2I | TCCGGA | 1 cut(s) | 74 |
| KroI | GCCGGC | 2 cut(s) | 344, 1392 |
| KroNI | GCCGGC | 2 cut(s) | 346, 1394 |
| Kzo9I | GATC | 3 cut(s) | 909, 955, 1581 |
| LmnI | GCTCC | 7 cut(s) | 105, 326, 635, 968, 1063, 1295, 1562 |
| Lsp1109I | GCAGC | 7 cut(s) | 458, 814, 1255, 1312, 1361, 1546, 1579 |
| LweI | GCATC | 1 cut(s) | 357 |
| MabI | ACCWGGT | 2 cut(s) | 353, 808 |
| MaeI | CTAG | 6 cut(s) | 537, 590, 1292, 1346, 1484, 1518 |
| MaeII | ACGT | 2 cut(s) | 1431, 1551 |
| MaeIII | GTNAC | 9 cut(s) | 280, 293, 397, 437, 568, 738, 898, 1301, 1687 |
| MalI | GATC | 3 cut(s) | 911, 957, 1583 |
| MboI | GATC | 3 cut(s) | 909, 955, 1581 |
| MboII | GAAGA | 8 cut(s) | 156, 212, 220, 402, 653, 695, 931, 1759 |
| MfeI | CAATTG | 1 cut(s) | 1758 |
| MflI | RGATCY | 1 cut(s) | 1581 |
| MhlI | GDGCHC | 2 cut(s) | 934, 1060 |
| MmeI | TCCRAC | 1 cut(s) | 637 |
| MroI | TCCGGA | 1 cut(s) | 74 |
| MroNI | GCCGGC | 2 cut(s) | 344, 1392 |
| MseI | TTAA | 1 cut(s) | 648 |
| MslI | CAYNNNNRTG | 4 cut(s) | 95, 278, 300, 1451 |
| MspI | CCGG | 8 cut(s) | 75, 345, 573, 948, 1173, 1190, 1299, 1393 |
| MspR9I | CCNGG | 4 cut(s) | 355, 810, 949, 1174 |
| MunI | CAATTG | 1 cut(s) | 1758 |
| MvaI | CCWGG | 2 cut(s) | 355, 810 |
| MvnI | CGCG | 4 cut(s) | 489, 777, 1318, 1332 |
| NaeI | GCCGGC | 2 cut(s) | 346, 1394 |
| NciI | CCSGG | 2 cut(s) | 949, 1174 |
| NcoI | CCATGG | 3 cut(s) | 96, 234, 1452 |
| NdeI | CATATG | 1 cut(s) | 1255 |
| NdeII | GATC | 3 cut(s) | 909, 955, 1581 |
| NgoMIV | GCCGGC | 2 cut(s) | 344, 1392 |
| NlaIV | GGNNCC | 5 cut(s) | 232, 1297, 1458, 1502, 1583 |
| NmuCI | GTSAC | 4 cut(s) | 280, 293, 568, 898 |
| NruI | TCGCGA | 1 cut(s) | 777 |
| NspV | TTCGAA | 4 cut(s) | 198, 1046, 1080, 1152 |
| OliI | CACNNNNGTG | 1 cut(s) | 300 |
| PaqCI | CACCTGC | 1 cut(s) | 306 |
| PdiI | GCCGGC | 2 cut(s) | 346, 1394 |
| PfeI | GAWTC | 2 cut(s) | 19, 1086 |
| PflFI | GACNNNGTC | 1 cut(s) | 1433 |
| PkrI | GCNGC | 7 cut(s) | 448, 829, 1270, 1327, 1351, 1536, 1594 |
| Ppu21I | YACGTR | 1 cut(s) | 1552 |
| PpuMI | RGGWCCY | 2 cut(s) | 230, 1501 |
| Psp124BI | GAGCTC | 1 cut(s) | 1060 |
| Psp5II | RGGWCCY | 2 cut(s) | 230, 1501 |
| Psp6I | CCWGG | 2 cut(s) | 353, 808 |
| PspEI | GGTNACC | 3 cut(s) | 293, 568, 1301 |
| PspGI | CCWGG | 2 cut(s) | 353, 808 |
| PspN4I | GGNNCC | 5 cut(s) | 232, 1297, 1458, 1502, 1583 |
| PspPI | GGNCC | 3 cut(s) | 230, 1192, 1501 |
| PspPPI | RGGWCCY | 2 cut(s) | 230, 1501 |
| PstI | CTGCAG | 1 cut(s) | 1273 |
| PstNI | CAGNNNCTG | 2 cut(s) | 47, 1592 |
| PsuI | RGATCY | 1 cut(s) | 1581 |
| PsyI | GACNNNGTC | 1 cut(s) | 1433 |
| RruI | TCGCGA | 1 cut(s) | 777 |
| RsaI | GTAC | 5 cut(s) | 45, 1022, 1209, 1614, 1699 |
| RsaNI | GTAC | 5 cut(s) | 44, 1021, 1208, 1613, 1698 |
| RseI | CAYNNNNRTG | 4 cut(s) | 95, 278, 300, 1451 |
| SacI | GAGCTC | 1 cut(s) | 1060 |
| SaqAI | TTAA | 1 cut(s) | 648 |
| SatI | GCNGC | 7 cut(s) | 447, 828, 1269, 1326, 1350, 1535, 1593 |
| Sau3AI | GATC | 3 cut(s) | 909, 955, 1581 |
| Sau96I | GGNCC | 3 cut(s) | 230, 1192, 1501 |
| ScaI | AGTACT | 1 cut(s) | 1209 |
| ScrFI | CCNGG | 4 cut(s) | 355, 810, 949, 1174 |
| SduI | GDGCHC | 2 cut(s) | 934, 1060 |
| SexAI | ACCWGGT | 2 cut(s) | 353, 808 |
| SfaNI | GCATC | 1 cut(s) | 357 |
| SfcI | CTRYAG | 1 cut(s) | 1269 |
| SfuI | TTCGAA | 4 cut(s) | 198, 1046, 1080, 1152 |
| SinI | GGWCC | 2 cut(s) | 230, 1501 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 95, 278, 300, 1451 |
| SmlI | CTYRAG | 1 cut(s) | 1136 |
| SmoI | CTYRAG | 1 cut(s) | 1136 |
| SnaBI | TACGTA | 1 cut(s) | 1552 |
| SsiI | CCGC | 1 cut(s) | 268 |
| SspMI | CTAG | 6 cut(s) | 537, 590, 1292, 1346, 1484, 1518 |
| SstI | GAGCTC | 1 cut(s) | 1060 |
| StyD4I | CCNGG | 4 cut(s) | 353, 808, 947, 1172 |
| StyI | CCWWGG | 7 cut(s) | 96, 234, 589, 961, 1452, 1558, 1683 |
| TaaI | ACNGT | 3 cut(s) | 128, 1212, 1672 |
| TaiI | ACGT | 2 cut(s) | 1434, 1554 |
| TaqI | TCGA | 8 cut(s) | 198, 378, 497, 1046, 1080, 1152, 1197, 1437 |
| TatI | WGTACW | 2 cut(s) | 1020, 1207 |
| TfiI | GAWTC | 2 cut(s) | 19, 1086 |
| Tru1I | TTAA | 1 cut(s) | 648 |
| Tru9I | TTAA | 1 cut(s) | 648 |
| TscAI | CASTG | 3 cut(s) | 285, 679, 1344 |
| TseFI | GTSAC | 4 cut(s) | 280, 293, 568, 898 |
| TseI | GCWGC | 7 cut(s) | 446, 827, 1268, 1325, 1349, 1534, 1592 |
| Tsp45I | GTSAC | 4 cut(s) | 280, 293, 568, 898 |
| TspDTI | ATGAA | 6 cut(s) | 250, 262, 653, 718, 1040, 1302 |
| TspRI | CASTG | 3 cut(s) | 285, 679, 1344 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1433 |
| VpaK11BI | GGWCC | 2 cut(s) | 230, 1501 |
| XapI | RAATTY | 3 cut(s) | 154, 644, 788 |
| XbaI | TCTAGA | 1 cut(s) | 1483 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 241 |
| XmaJI | CCTAGG | 1 cut(s) | 589 |
| XspI | CTAG | 6 cut(s) | 537, 590, 1292, 1346, 1484, 1518 |
| ZraI | GACGTC | 1 cut(s) | 1432 |
| ZrmI | AGTACT | 1 cut(s) | 1209 |