Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000740

Physical Location & Seq

Genomic Coordinates Reverse (-)

88137768 .. 88143613

Gene Structure 5846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGCCTCCAATGCACTCTCTCTCCTCCCCTCCTGCTGCCGCTCCCCGTCCATTTTCCGACATGAACCGACGTCGTCTTCACCATTACTATCCACAAGGTCCAAGCTGGCTAGGACCACCAGATTGGCCATTTCCACAGACCAAACTCCAGTCTTCACGACGTCAACGGCAACTGCTTTGTCAGAGTCAGACAAGACCAAGACCAAGACCGAGGAAGAGCACTTGGCTCTGGAGGACGACGTTGGTGATGATCAAGCATCGGAAGAGCGTGCGAGCTTAAACCAGTTCTTTGAGCAAGCCAAGGGTCTTCTCAGATCGGACGACCAGTACGGGCAGTACGGCACTGGAACACCTCGCTGGTTCTCGCCTTTAGACTGCGGGAGCGGGACCCCCTCCAACCATGATTCCCCGCTCCTTCTCTTTTTGCCCGGAATTGATGGCACCGGACTTGGCCTTGTAAGGCATCATCAGAAACTTGGAAAGATTTTTGAGGTCTCGTGCTTGCATATCCCTCCTAAGGATCGAACACCGTTTACAGACTTAGTGAAGCTGGTTGGGAGAACAATTCGTTCAGAGCATGATGCCTCACCCGATCGTCCCATATATCTTGTTGGAGAATCTCTTGGAGCATGCCTTGCACTCTCTGTGGCAGCCCTTAACCCGGATATCGACCTTGAGCTTATTTTAGCAAATCCAGCAACATCCTTCAGCAAGTCACCACTTCAAGCTGTATTACCTTTACTGCAGTTCATGCCTGACTCTCCCAATCTTAGCCTTCCTCATATACTGAGTACAATTACAGGTGCAATGGTGGCTAGTCTGGAGAAGGGAGTTGGAGGACTTCCACTGCCACAGACAGTTGGAAAGCTATCACGGGATATTATTGAACCATCAATATCTAACCTTTCTGTTCTTGCTGATATCTTACCCAGAGAAACACTTCTCTGGAAGCTACAAATGATCAGTACAGCTTCTACATATGCCAATTCACGCCTCCATGCTGTAAAAGCTCATACCGTGATAGTATCCAGTGGAAGAGATCCATTGCTACCTAGTCAAGAGGAAGGTCAAAGACTCAAAAGCCTGCTTGCAACTTGTCAGGTCCGTACGTTTGAAGACTGCGGCCATTTCCTCTTCTTGGAAGATGCTTTTGATTTGCTTACTGTCATCAAGAATGTTGGTATCTATCGTCGTTCAAAAGAACGAGACTTTGTTTCAGATTACATACCACCATCACCTTCCGAAGTTAAAGGCATAATGGAAAAAAACAGATTGGTTAACATAATCATGAGCCCAGTGATGCTCTCAACTTTAGCAGACGGAAAGATGGTGAGGGGCTTTGCCGGGATTCCTACAGAGGGTCCTGTATTGTATGTTGGTTATCACATGTTACTGGGATTTGAAATAGTTCCCTTGGTGACTCAACTGTTCGAACAAAAAAACGTCCATCTGCGAGGGATAGCACATCCAATGATGTTTCTCAAAACGAAAAATGGAAGTTTACCTGAGTTAACATTATACGATGATTTCAGACTTATGGGCGCTGTTCCTGTCTCGGGAAAAAACTTTTTCAAACTTCTCTCTACAAAGTCTCATGTCCTACTCTATCCAGGTGGAGTGCGTGAGGCTCTTCACCGGAAGGGGGAAGCATATAAGTTGTTCTGGCCGGAACGGTCAGAATTTGTGAGGATGGCAGCTAGATTTGGAGCCAAAATCGTACCTTTTGGTGCTGTTGGAGAAGATGATATTGGTGATCTACTTCTCGATTATGAAGACCAGATGAAAATTCCTTTCCTTAGGAAATCTATAGAGGACTTAACGGCTGAAGCTGCAAAAGTGAGGTCCACCGTTGATGGGGAGATTGGAAACCAAGCTATGCACCTTCCAGGAATTGTACCGAAATTTCCTGGCCGGTTTTATTATAAATTTGGGAAACCAATTGAAACAGCAGGGAGGAAGCAGGAATTACGAGACAAGGAGAAAGCTCATGAACTATATTTGGAAGTAAAATCGGAGGTTGAGAAGTCCCTTGCTTATTTGCAGAAAAAAAGAGAAAGTGATCCTTACAGAAACCTCGCGGCTCGGTTACAATACCAGGCCATACACGGGTTTGCGTCTGAAGTTCCTTCATTTGACCTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DAGAT Hydrolase_4

Protein Analysis

714

Amino Acids

78.9

Weight (kDa)

6.57

Isoelectric Point (pI)

46.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Abhydrolase_6	PF12697	172 - 385	2.5e-08	Alpha/beta hydrolase family
Abhydrolase_1	PF00561	181 - 382	1e-08	alpha/beta hydrolase fold
Hydrolase_4	PF12146	188 - 381	2.1e-07	Serine aminopeptidase, S33
DAGAT	PF03982	507 - 585	5.6e-09	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02030 AT3G02030 AT3G26820 AT3G26820 AT3G26840 AT5G41120 AT5G41120 AT5G41120 AT5G41130 AT5G41130 AT5G41130
fragaria_vesca	FvH4_3g35400 FvH4_3g39220 FvH4_3g39220 FvH4_3g39270 FvH4_3g39280 FvH4_3g39280 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060
malus_domestica	MD09G1005800.v1.1 MD17G1009900.v1.1
prunus_persica	Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1
pyrus_communis	pycom111g00420
rosa_chinensis	RchiOBHm_Chr2g0176241 RchiOBHm_Chr5g0070671 RchiOBHm_Chr5g0070681 RchiOBHm_Chr5g0070691
rosa_laevigata	RLG00000022394 RLG00000036149 RLG00000036150 RLG00000036152
rosa_multiflora	Rmu_co8466433.1_g000001 Rmu_sc0000249.1_g000001 Rmu_sc0000405.1_g000016 Rmu_sc0005197.1_g000009 Rmu_sc0005197.1_g000015 Rmu_sc0036323.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010480 Rroxscaffold_1G00010530 Rroxscaffold_1G00010550 Rroxscaffold_1G00010560 Rroxscaffold_2G00076650 Rroxscaffold_5G00357250
rosa_rugosa	Rorug02G0592200 Rorug02G0592300 Rorug05G0407500 Rorug05G0407800
rosa_samantha	Rh2AG670700 Rh2BG682200 Rh2CG645000 Rh2DG695800 Rh5AG463200 Rh5AG463300 Rh5AG463400 Rh5BG481200 Rh5CG505400 Rh5CG505500 Rh5DG493300 Rh5DG493600 Rh5DG493700
rosa_wichuraiana	Rw2G055020 Rw5G043110 Rw5G043120 Rw5G043130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1923
AatII	GACGTC	2 cut(s)	74, 164
AccB1I	GGYRCC	1 cut(s)	440
AccBSI	CCGCTC	3 cut(s)	42, 384, 412
AccII	CGCG	1 cut(s)	2078
AciI	CCGC	6 cut(s)	40, 378, 384, 410, 1122, 2078
AclWI	GGATC	3 cut(s)	528, 1034, 2054
AcoI	YGGCCR	4 cut(s)	126, 1123, 1664, 1909
AcsI	RAATTY	4 cut(s)	1679, 1785, 1901, 1925
AcuI	CTGAAG	3 cut(s)	691, 1845, 2139
AcyI	GRCGYC	2 cut(s)	71, 161
AfaI	GTAC	7 cut(s)	329, 338, 793, 967, 1108, 1719, 1896
AfiI	CCNNNNNNNGG	8 cut(s)	517, 661, 1138, 1358, 1556, 1642, 1854, 2106
AflIII	ACRYGT	1 cut(s)	1386
AgsI	TTSAA	7 cut(s)	725, 887, 1115, 1197, 1403, 1573, 1943
AjnI	CCWGG	4 cut(s)	1609, 1885, 1906, 2094
AjuI	GAANNNNNNNTTGG	2 cut(s)	1731, 1763
Alw21I	GWGCWC	1 cut(s)	222
Alw26I	GTCTC	5 cut(s)	499, 1200, 1558, 1596, 1965
AlwI	GGATC	3 cut(s)	528, 1034, 2054
Ama87I	CYCGRG	1 cut(s)	1555
AoxI	GGCC	7 cut(s)	3, 126, 451, 1123, 1664, 1909, 2097
ApeKI	GCWGC	4 cut(s)	36, 650, 1694, 1829
ApoI	RAATTY	4 cut(s)	1679, 1785, 1901, 1925
ArsI	GACNNNNNNTTYG	2 cut(s)	1826, 1858
Asp700I	GAANNNNTTC	2 cut(s)	939, 1407
AspLEI	GCGC	1 cut(s)	1544
AspS9I	GGNCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
AsuC2I	CCSGG	3 cut(s)	429, 662, 1345
AsuHPI	GGTGA	9 cut(s)	72, 257, 579, 708, 1227, 1342, 1429, 1625, 1763
AsuII	TTCGAA	1 cut(s)	1431
AvaI	CYCGRG	1 cut(s)	1555
AvaII	GGWCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
AxyI	CCTNAGG	2 cut(s)	516, 1796
BalI	TGGCCA	1 cut(s)	128
BanI	GGYRCC	1 cut(s)	440
BanII	GRGCYC	1 cut(s)	1295
BauI	CACGAG	1 cut(s)	496
BbsI	GAAGAC	5 cut(s)	69, 145, 299, 1122, 1779
Bbv12I	GWGCWC	1 cut(s)	222
BbvI	GCAGC	4 cut(s)	23, 662, 1706, 1816
BccI	CCATC	7 cut(s)	431, 898, 1240, 1321, 1455, 1684, 1847
BceAI	ACGGC	3 cut(s)	183, 355, 1836
BciT130I	CCWGG	4 cut(s)	1611, 1887, 1908, 2096
BciVI	GTATCC	1 cut(s)	1036
BclI	TGATCA	2 cut(s)	250, 960
BcnI	CCSGG	3 cut(s)	429, 662, 1345
BcoDI	GTCTC	5 cut(s)	499, 1200, 1558, 1596, 1965
BfaI	CTAG	4 cut(s)	111, 816, 1053, 1698
BfmI	CTRYAG	3 cut(s)	743, 1353, 1806
BfoI	RGCGCY	1 cut(s)	1545
BfuI	GTATCC	1 cut(s)	1036
BisI	GCNGC	7 cut(s)	37, 40, 651, 1123, 1695, 1830, 2079
BlsI	GCNGC	7 cut(s)	38, 41, 652, 1124, 1696, 1831, 2080
Bme1390I	CCNGG	7 cut(s)	429, 662, 1345, 1611, 1887, 1908, 2096
Bme18I	GGWCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
BmeT110I	CYCGRG	1 cut(s)	1555
BmgT120I	GGNCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
BmiI	GGNNCC	5 cut(s)	388, 389, 442, 1362, 1708
BmrFI	CCNGG	7 cut(s)	429, 662, 1345, 1611, 1887, 1908, 2096
BmrI	ACTGGG	2 cut(s)	1289, 1403
BmsI	GCATC	5 cut(s)	266, 472, 571, 1135, 1290
BmuI	ACTGGG	2 cut(s)	1289, 1403
BpiI	GAAGAC	5 cut(s)	69, 145, 299, 1122, 1779
BpmI	CTGGAG	3 cut(s)	132, 251, 842
Bpu14I	TTCGAA	1 cut(s)	1431
BpuEI	CTTGAG	1 cut(s)	695
BpuMI	CCSGG	3 cut(s)	429, 662, 1345
BsaHI	GRCGYC	2 cut(s)	71, 161
BsaI	GGTCTC	1 cut(s)	499
BsaJI	CCNNGG	3 cut(s)	210, 300, 1413
BsaWI	WCCGGW	2 cut(s)	443, 1635
BsaXI	ACNNNNNCTCC	2 cut(s)	6, 36
Bsc4I	CCNNNNNNNGG	8 cut(s)	517, 661, 1138, 1358, 1556, 1642, 1854, 2106
Bse118I	RCCGGY	1 cut(s)	1911
Bse1I	ACTGG	7 cut(s)	149, 283, 325, 349, 1029, 1295, 1398
Bse21I	CCTNAGG	2 cut(s)	516, 1796
Bse3DI	GCAATG	2 cut(s)	813, 1043
BseBI	CCWGG	4 cut(s)	1611, 1887, 1908, 2096
BseDI	CCNNGG	3 cut(s)	210, 300, 1413
BseGI	GGATG	3 cut(s)	701, 1465, 1695
BseLI	CCNNNNNNNGG	8 cut(s)	517, 661, 1138, 1358, 1556, 1642, 1854, 2106
BseMI	GCAATG	2 cut(s)	813, 1043
BseMII	CTCAG	3 cut(s)	325, 779, 1497
BseNI	ACTGG	7 cut(s)	149, 283, 325, 349, 1029, 1295, 1398
BseRI	GAGGAG	1 cut(s)	14
BseXI	GCAGC	4 cut(s)	23, 662, 1706, 1816
Bsh1236I	CGCG	1 cut(s)	2078
Bsh1285I	CGRYCG	1 cut(s)	595
BshFI	GGCC	7 cut(s)	5, 128, 453, 1125, 1666, 1911, 2099
BshNI	GGYRCC	1 cut(s)	440
BsiEI	CGRYCG	1 cut(s)	595
BsiHKAI	GWGCWC	1 cut(s)	222
BsiHKCI	CYCGRG	1 cut(s)	1555
BsiSI	CCGG	7 cut(s)	429, 444, 662, 1344, 1636, 1667, 1912
BsiWI	CGTACG	1 cut(s)	1106
BslFI	GGGAC	3 cut(s)	400, 582, 2011
BslI	CCNNNNNNNGG	8 cut(s)	517, 661, 1138, 1358, 1556, 1642, 1854, 2106
BsmAI	GTCTC	5 cut(s)	499, 1200, 1558, 1596, 1965
BsmFI	GGGAC	3 cut(s)	400, 582, 2011
BsnI	GGCC	7 cut(s)	5, 128, 453, 1125, 1666, 1911, 2099
Bso31I	GGTCTC	1 cut(s)	499
BsoBI	CYCGRG	1 cut(s)	1555
Bsp119I	TTCGAA	1 cut(s)	1431
Bsp1286I	GDGCHC	2 cut(s)	222, 1295
Bsp143I	GATC	8 cut(s)	250, 314, 520, 592, 960, 1039, 1753, 2059
BspACI	CCGC	6 cut(s)	40, 378, 384, 410, 1122, 2078
BspANI	GGCC	7 cut(s)	5, 128, 453, 1125, 1666, 1911, 2099
BspCNI	CTCAG	3 cut(s)	324, 780, 1498
BspFNI	CGCG	1 cut(s)	2078
BspHI	TCATGA	2 cut(s)	1287, 1987
BspLI	GGNNCC	5 cut(s)	388, 389, 442, 1362, 1708
BspMAI	CTGCAG	1 cut(s)	747
BspPI	GGATC	3 cut(s)	528, 1034, 2054
BspQI	GCTCTTC	3 cut(s)	210, 258, 1635
BspT104I	TTCGAA	1 cut(s)	1431
BspT107I	GGYRCC	1 cut(s)	440
BspTNI	GGTCTC	1 cut(s)	499
BsrBI	CCGCTC	3 cut(s)	42, 384, 412
BsrDI	GCAATG	2 cut(s)	813, 1043
BsrFI	RCCGGY	1 cut(s)	1911
BsrI	ACTGG	7 cut(s)	149, 283, 325, 349, 1029, 1295, 1398
BssAI	RCCGGY	1 cut(s)	1911
BssECI	CCNNGG	3 cut(s)	210, 300, 1413
BssMI	GATC	8 cut(s)	250, 314, 520, 592, 960, 1039, 1753, 2059
BssNI	GRCGYC	2 cut(s)	71, 161
BssSI	CACGAG	1 cut(s)	496
BssT1I	CCWWGG	2 cut(s)	300, 1413
Bst2BI	CACGAG	1 cut(s)	496
Bst2UI	CCWGG	4 cut(s)	1611, 1887, 1908, 2096
Bst4CI	ACNGT	7 cut(s)	531, 859, 1018, 1165, 1428, 1674, 1849
Bst6I	CTCTTC	5 cut(s)	210, 258, 1030, 1139, 1635
BstACI	GRCGYC	2 cut(s)	71, 161
BstAPI	GCANNNNNTGC	2 cut(s)	635, 751
BstBI	TTCGAA	1 cut(s)	1431
BstC8I	GCNNGC	8 cut(s)	108, 270, 274, 297, 503, 631, 1085, 1089
BstDEI	CTNAG	7 cut(s)	311, 516, 541, 770, 788, 1506, 1796
BstF5I	GGATG	3 cut(s)	701, 1465, 1695
BstFNI	CGCG	1 cut(s)	2078
BstH2I	RGCGCY	1 cut(s)	1545
BstHHI	GCGC	1 cut(s)	1544
BstKTI	GATC	8 cut(s)	253, 317, 523, 595, 963, 1042, 1756, 2062
BstMAI	GTCTC	5 cut(s)	499, 1200, 1558, 1596, 1965
BstMBI	GATC	8 cut(s)	250, 314, 520, 592, 960, 1039, 1753, 2059
BstMCI	CGRYCG	1 cut(s)	595
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 635, 695, 751, 812, 1007, 1829
BstNI	CCWGG	4 cut(s)	1611, 1887, 1908, 2096
BstNSI	RCATGY	2 cut(s)	633, 1390
BstSCI	CCNGG	7 cut(s)	427, 660, 1343, 1609, 1885, 1906, 2094
BstSFI	CTRYAG	3 cut(s)	743, 1353, 1806
BstUI	CGCG	1 cut(s)	2078
BstV1I	GCAGC	4 cut(s)	23, 662, 1706, 1816
BstV2I	GAAGAC	5 cut(s)	69, 145, 299, 1122, 1779
BstX2I	RGATCY	1 cut(s)	1039
BstXI	CCANNNNNNTGG	1 cut(s)	124
BstYI	RGATCY	1 cut(s)	1039
Bsu36I	CCTNAGG	2 cut(s)	516, 1796
BsuI	GTATCC	1 cut(s)	1036
BsuRI	GGCC	7 cut(s)	5, 128, 453, 1125, 1666, 1911, 2099
BtsCI	GGATG	3 cut(s)	701, 1465, 1695
BtsI	GCAGTG	1 cut(s)	845
BtsIMutI	CAGTG	4 cut(s)	342, 845, 1036, 1302
Cac8I	GCNNGC	8 cut(s)	108, 270, 274, 297, 503, 631, 1085, 1089
CciI	TCATGA	2 cut(s)	1287, 1987
CfoI	GCGC	1 cut(s)	1544
Cfr10I	RCCGGY	1 cut(s)	1911
Cfr13I	GGNCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
CseI	GACGC	1 cut(s)	2103
Csp6I	GTAC	7 cut(s)	328, 337, 792, 966, 1107, 1718, 1895
CviQI	GTAC	7 cut(s)	328, 337, 792, 966, 1107, 1718, 1895
DdeI	CTNAG	7 cut(s)	311, 516, 541, 770, 788, 1506, 1796
DpnI	GATC	8 cut(s)	252, 316, 522, 594, 962, 1041, 1755, 2061
DpnII	GATC	8 cut(s)	250, 314, 520, 592, 960, 1039, 1753, 2059
EaeI	YGGCCR	4 cut(s)	126, 1123, 1664, 1909
Eam1104I	CTCTTC	5 cut(s)	210, 258, 1030, 1139, 1635
EarI	CTCTTC	5 cut(s)	210, 258, 1030, 1139, 1635
Eco130I	CCWWGG	2 cut(s)	300, 1413
Eco24I	GRGCYC	1 cut(s)	1295
Eco31I	GGTCTC	1 cut(s)	499
Eco32I	GATATC	2 cut(s)	667, 922
Eco47I	GGWCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
Eco57I	CTGAAG	3 cut(s)	691, 1845, 2139
Eco81I	CCTNAGG	2 cut(s)	516, 1796
Eco88I	CYCGRG	1 cut(s)	1555
EcoO109I	RGGNCCY	2 cut(s)	387, 1361
EcoRII	CCWGG	4 cut(s)	1609, 1885, 1906, 2094
EcoRV	GATATC	2 cut(s)	667, 922
EcoT14I	CCWWGG	2 cut(s)	300, 1413
EcoT38I	GRGCYC	1 cut(s)	1295
ErhI	CCWWGG	2 cut(s)	300, 1413
FalI	AAGNNNNNCTT	2 cut(s)	2047, 2079
FaqI	GGGAC	3 cut(s)	400, 582, 2011
FauI	CCCGC	3 cut(s)	371, 377, 417
FauNDI	CATATG	1 cut(s)	979
FbaI	TGATCA	2 cut(s)	250, 960
Fnu4HI	GCNGC	7 cut(s)	37, 40, 651, 1123, 1695, 1830, 2079
FokI	GGATG	3 cut(s)	688, 1452, 1702
FriOI	GRGCYC	1 cut(s)	1295
Fsp4HI	GCNGC	7 cut(s)	37, 40, 651, 1123, 1695, 1830, 2079
FspBI	CTAG	4 cut(s)	111, 816, 1053, 1698
GlaI	GCGC	1 cut(s)	1543
GluI	GCNGC	7 cut(s)	37, 40, 651, 1123, 1695, 1830, 2079
GsuI	CTGGAG	3 cut(s)	132, 251, 842
HaeII	RGCGCY	1 cut(s)	1545
HaeIII	GGCC	7 cut(s)	5, 128, 453, 1125, 1666, 1911, 2099
HapII	CCGG	7 cut(s)	429, 444, 662, 1344, 1636, 1667, 1912
HgaI	GACGC	1 cut(s)	2103
HhaI	GCGC	1 cut(s)	1544
Hin1I	GRCGYC	2 cut(s)	71, 161
Hin6I	GCGC	1 cut(s)	1542
HinP1I	GCGC	1 cut(s)	1542
HincII	GTYRAC	3 cut(s)	165, 1279, 1512
HindII	GTYRAC	3 cut(s)	165, 1279, 1512
HinfI	GANTC	7 cut(s)	185, 404, 617, 758, 1074, 1348, 1420
HpaI	GTTAAC	2 cut(s)	1279, 1512
HpaII	CCGG	7 cut(s)	429, 444, 662, 1344, 1636, 1667, 1912
HphI	GGTGA	9 cut(s)	72, 257, 579, 708, 1227, 1342, 1429, 1625, 1763
Hpy166II	GTNNAC	6 cut(s)	165, 534, 1279, 1502, 1512, 1845
Hpy8I	GTNNAC	6 cut(s)	165, 534, 1279, 1502, 1512, 1845
Hpy99I	CGWCG	5 cut(s)	73, 76, 163, 242, 1194
HpyAV	CCTTC	9 cut(s)	425, 715, 785, 820, 1058, 1248, 1633, 1892, 2136
HpyCH4III	ACNGT	7 cut(s)	531, 859, 1018, 1165, 1428, 1674, 1849
HpyCH4IV	ACGT	5 cut(s)	71, 161, 240, 1109, 1443
HpyCH4V	TGCA	9 cut(s)	14, 505, 638, 745, 806, 1091, 1832, 1879, 2041
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 635, 695, 751, 812, 1007, 1829
HpyF3I	CTNAG	7 cut(s)	311, 516, 541, 770, 788, 1506, 1796
HpySE526I	ACGT	5 cut(s)	71, 161, 240, 1109, 1443
Hsp92I	GRCGYC	2 cut(s)	71, 161
HspAI	GCGC	1 cut(s)	1542
KflI	GGGWCCC	1 cut(s)	387
Ksp22I	TGATCA	2 cut(s)	250, 960
KspAI	GTTAAC	2 cut(s)	1279, 1512
Kzo9I	GATC	8 cut(s)	250, 314, 520, 592, 960, 1039, 1753, 2059
LguI	GCTCTTC	3 cut(s)	210, 258, 1635
LmnI	GCTCC	5 cut(s)	47, 381, 417, 626, 1706
Lsp1109I	GCAGC	4 cut(s)	23, 662, 1706, 1816
LweI	GCATC	5 cut(s)	266, 472, 571, 1135, 1290
MaeI	CTAG	4 cut(s)	111, 816, 1053, 1698
MaeII	ACGT	5 cut(s)	71, 161, 240, 1109, 1443
MaeIII	GTNAC	4 cut(s)	714, 1389, 1417, 2085
MalI	GATC	8 cut(s)	252, 316, 522, 594, 962, 1041, 1755, 2061
MbiI	CCGCTC	3 cut(s)	42, 384, 412
MboI	GATC	8 cut(s)	250, 314, 520, 592, 960, 1039, 1753, 2059
MfeI	CAATTG	1 cut(s)	1938
MflI	RGATCY	1 cut(s)	1039
MhlI	GDGCHC	2 cut(s)	222, 1295
MlsI	TGGCCA	1 cut(s)	128
MluNI	TGGCCA	1 cut(s)	128
MlyI	GAGTC	4 cut(s)	194, 752, 1068, 1414
MmeI	TCCRAC	6 cut(s)	82, 420, 592, 814, 841, 1714
Mox20I	TGGCCA	1 cut(s)	128
MroXI	GAANNNNTTC	2 cut(s)	939, 1407
MscI	TGGCCA	1 cut(s)	128
MseI	TTAA	7 cut(s)	278, 657, 1248, 1278, 1511, 1817, 2143
MslI	CAYNNNNRTG	1 cut(s)	1286
Msp20I	TGGCCA	1 cut(s)	128
MspI	CCGG	7 cut(s)	429, 444, 662, 1344, 1636, 1667, 1912
MspR9I	CCNGG	7 cut(s)	429, 662, 1345, 1611, 1887, 1908, 2096
MunI	CAATTG	1 cut(s)	1938
MvaI	CCWGG	4 cut(s)	1611, 1887, 1908, 2096
MvnI	CGCG	1 cut(s)	2078
MwoI	GCNNNNNNNGC	7 cut(s)	11, 635, 695, 751, 812, 1007, 1829
NciI	CCSGG	3 cut(s)	429, 662, 1345
NdeI	CATATG	1 cut(s)	979
NdeII	GATC	8 cut(s)	250, 314, 520, 592, 960, 1039, 1753, 2059
NlaIV	GGNNCC	5 cut(s)	388, 389, 442, 1362, 1708
NmuCI	GTSAC	2 cut(s)	714, 1417
NspI	RCATGY	2 cut(s)	633, 1390
NspV	TTCGAA	1 cut(s)	1431
PaeI	GCATGC	1 cut(s)	633
PagI	TCATGA	2 cut(s)	1287, 1987
PciI	ACATGT	1 cut(s)	1386
PciSI	GCTCTTC	3 cut(s)	210, 258, 1635
PdmI	GAANNNNTTC	2 cut(s)	939, 1407
PfeI	GAWTC	3 cut(s)	404, 617, 1348
Pfl23II	CGTACG	1 cut(s)	1106
PflFI	GACNNNGTC	1 cut(s)	73
PfoI	TCCNGGA	1 cut(s)	1885
PkrI	GCNGC	7 cut(s)	38, 41, 652, 1124, 1696, 1831, 2080
Ple19I	CGATCG	1 cut(s)	595
PleI	GAGTC	4 cut(s)	193, 752, 1068, 1414
PpsI	GAGTC	4 cut(s)	193, 752, 1068, 1414
PpuMI	RGGWCCY	2 cut(s)	387, 1361
PscI	ACATGT	1 cut(s)	1386
PsiI	TTATAA	1 cut(s)	1923
Psp5II	RGGWCCY	2 cut(s)	387, 1361
Psp6I	CCWGG	4 cut(s)	1609, 1885, 1906, 2094
PspGI	CCWGG	4 cut(s)	1609, 1885, 1906, 2094
PspLI	CGTACG	1 cut(s)	1106
PspN4I	GGNNCC	5 cut(s)	388, 389, 442, 1362, 1708
PspPI	GGNCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
PspPPI	RGGWCCY	2 cut(s)	387, 1361
PsrI	GAACNNNNNNTAC	2 cut(s)	517, 549
PstI	CTGCAG	1 cut(s)	747
PsuI	RGATCY	1 cut(s)	1039
PsyI	GACNNNGTC	1 cut(s)	73
PvuI	CGATCG	1 cut(s)	595
RsaI	GTAC	7 cut(s)	329, 338, 793, 967, 1108, 1719, 1896
RsaNI	GTAC	7 cut(s)	328, 337, 792, 966, 1107, 1718, 1895
RseI	CAYNNNNRTG	1 cut(s)	1286
SapI	GCTCTTC	3 cut(s)	210, 258, 1635
SaqAI	TTAA	7 cut(s)	278, 657, 1248, 1278, 1511, 1817, 2143
SatI	GCNGC	7 cut(s)	37, 40, 651, 1123, 1695, 1830, 2079
Sau3AI	GATC	8 cut(s)	250, 314, 520, 592, 960, 1039, 1753, 2059
Sau96I	GGNCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
SchI	GAGTC	4 cut(s)	194, 752, 1068, 1414
ScrFI	CCNGG	7 cut(s)	429, 662, 1345, 1611, 1887, 1908, 2096
SduI	GDGCHC	2 cut(s)	222, 1295
SfaNI	GCATC	5 cut(s)	266, 472, 571, 1135, 1290
SfcI	CTRYAG	3 cut(s)	743, 1353, 1806
SfuI	TTCGAA	1 cut(s)	1431
SinI	GGWCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
SmiMI	CAYNNNNRTG	1 cut(s)	1286
SmlI	CTYRAG	1 cut(s)	674
SmoI	CTYRAG	1 cut(s)	674
SphI	GCATGC	1 cut(s)	633
SsiI	CCGC	6 cut(s)	40, 378, 384, 410, 1122, 2078
SspMI	CTAG	4 cut(s)	111, 816, 1053, 1698
StyD4I	CCNGG	7 cut(s)	427, 660, 1343, 1609, 1885, 1906, 2094
StyI	CCWWGG	2 cut(s)	300, 1413
TaaI	ACNGT	7 cut(s)	531, 859, 1018, 1165, 1428, 1674, 1849
TaiI	ACGT	5 cut(s)	74, 164, 243, 1112, 1446
TaqI	TCGA	4 cut(s)	523, 669, 1431, 1764
TaqII	GACCGA	1 cut(s)	224
TatI	WGTACW	2 cut(s)	791, 965
TauI	GCSGC	3 cut(s)	42, 1125, 2081
TfiI	GAWTC	3 cut(s)	404, 617, 1348
Tru1I	TTAA	7 cut(s)	278, 657, 1248, 1278, 1511, 1817, 2143
Tru9I	TTAA	7 cut(s)	278, 657, 1248, 1278, 1511, 1817, 2143
TscAI	CASTG	4 cut(s)	349, 852, 1036, 1302
TseFI	GTSAC	2 cut(s)	714, 1417
TseI	GCWGC	4 cut(s)	36, 650, 1694, 1829
Tsp45I	GTSAC	2 cut(s)	714, 1417
TspDTI	ATGAA	6 cut(s)	78, 739, 1785, 1796, 2004, 2118
TspGWI	ACGGA	2 cut(s)	1094, 1335
TspRI	CASTG	4 cut(s)	349, 852, 1036, 1302
Tth111I	GACNNNGTC	1 cut(s)	73
VpaK11BI	GGWCC	6 cut(s)	99, 114, 387, 1102, 1361, 1842
XapI	RAATTY	4 cut(s)	1679, 1785, 1901, 1925
XceI	RCATGY	2 cut(s)	633, 1390
XmnI	GAANNNNTTC	2 cut(s)	939, 1407
XspI	CTAG	4 cut(s)	111, 816, 1053, 1698
ZraI	GACGTC	2 cut(s)	72, 162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.