RchiOBHm_Chr1g0379931

salt tolerance-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
65775624 .. 65778270
2647 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 237 bp
ATGAACAGAGTCGCCCTCCAAGATAATCAAGAAACCAAGACTAAAGCGATGAAGGAGATAGAGTGCCCCAGATCCACTTTCTCTCTCCTCCTCGCTCTCAAACTAGGGTCAATTGAAGTGATACAAAAGACGAAGGTGTTCGTAACGGCGGAGGCGAACGTGCTGTGCTGTTTCGATGATGCGGCGTTGTGTTGGGCCAGTGACAAGAAGGTCCACGACGCTATGTTCATCAGATAG

Protein Analysis

78

Amino Acids

8.78

Weight (kDa)

7.65

Isoelectric Point (pI)

42.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
AciI CCGC 2 cut(s) 149, 182
AclWI GGATC 1 cut(s) 66
AgsI TTSAA 1 cut(s) 116
AlwI GGATC 1 cut(s) 66
AoxI GGCC 1 cut(s) 195
Asp700I GAANNNNTTC 1 cut(s) 137
AspS9I GGNCC 2 cut(s) 195, 211
AvaII GGWCC 1 cut(s) 211
BaeGI GKGCMC 1 cut(s) 68
BceAI ACGGC 1 cut(s) 162
BfaI CTAG 1 cut(s) 104
BisI GCNGC 1 cut(s) 183
BlsI GCNGC 1 cut(s) 184
Bme18I GGWCC 1 cut(s) 211
BmgT120I GGNCC 2 cut(s) 195, 211
BmsI GCATC 1 cut(s) 169
BplI GAGNNNNNCTC 1 cut(s) 32
BsaXI ACNNNNNCTCC 2 cut(s) 47, 77
Bse1I ACTGG 1 cut(s) 198
BseNI ACTGG 1 cut(s) 198
BseRI GAGGAG 2 cut(s) 77, 80
BseSI GKGCMC 1 cut(s) 68
BshFI GGCC 1 cut(s) 197
BsnI GGCC 1 cut(s) 197
Bsp1286I GDGCHC 1 cut(s) 68
Bsp143I GATC 1 cut(s) 71
BspACI CCGC 2 cut(s) 149, 182
BspANI GGCC 1 cut(s) 197
BspPI GGATC 1 cut(s) 66
BsrI ACTGG 1 cut(s) 198
BssMI GATC 1 cut(s) 71
BstKTI GATC 1 cut(s) 74
BstMBI GATC 1 cut(s) 71
BstSLI GKGCMC 1 cut(s) 68
BstX2I RGATCY 1 cut(s) 71
BstYI RGATCY 1 cut(s) 71
BsuRI GGCC 1 cut(s) 197
BtgZI GCGATG 1 cut(s) 62
BtsIMutI CAGTG 1 cut(s) 205
Cfr13I GGNCC 2 cut(s) 195, 211
CseI GACGC 1 cut(s) 227
CviJI RGCY 1 cut(s) 197
CviKI_1 RGCY 1 cut(s) 197
DpnI GATC 1 cut(s) 73
DpnII GATC 1 cut(s) 71
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EciI GGCGGA 1 cut(s) 164
Eco47I GGWCC 1 cut(s) 211
FaiI YATR 1 cut(s) 224
Fnu4HI GCNGC 1 cut(s) 183
Fsp4HI GCNGC 1 cut(s) 183
FspBI CTAG 1 cut(s) 104
GluI GCNGC 1 cut(s) 183
HaeIII GGCC 1 cut(s) 197
HgaI GACGC 1 cut(s) 227
HinfI GANTC 1 cut(s) 9
Hpy166II GTNNAC 1 cut(s) 214
Hpy188I TCNGA 1 cut(s) 233
Hpy188III TCNNGA 1 cut(s) 29
Hpy8I GTNNAC 1 cut(s) 214
Hpy99I CGWCG 1 cut(s) 221
HpyAV CCTTC 3 cut(s) 46, 127, 202
HpyCH4IV ACGT 1 cut(s) 159
HpySE526I ACGT 1 cut(s) 159
Kzo9I GATC 1 cut(s) 71
LpnPI CCDG 2 cut(s) 82, 211
LweI GCATC 1 cut(s) 169
MaeI CTAG 1 cut(s) 104
MaeII ACGT 1 cut(s) 159
MaeIII GTNAC 2 cut(s) 142, 200
MalI GATC 1 cut(s) 73
MboI GATC 1 cut(s) 71
MfeI CAATTG 1 cut(s) 111
MflI RGATCY 1 cut(s) 71
MhlI GDGCHC 1 cut(s) 68
MluCI AATT 1 cut(s) 111
MlyI GAGTC 1 cut(s) 18
MnlI CCTC 4 cut(s) 26, 98, 101, 145
MroXI GAANNNNTTC 1 cut(s) 137
MunI CAATTG 1 cut(s) 111
NdeII GATC 1 cut(s) 71
NmuCI GTSAC 1 cut(s) 200
PcsI WCGNNNNNNNCGW 1 cut(s) 152
PdmI GAANNNNTTC 1 cut(s) 137
PkrI GCNGC 1 cut(s) 184
PleI GAGTC 1 cut(s) 17
PpsI GAGTC 1 cut(s) 17
PspPI GGNCC 2 cut(s) 195, 211
PsuI RGATCY 1 cut(s) 71
SatI GCNGC 1 cut(s) 183
Sau3AI GATC 1 cut(s) 71
Sau96I GGNCC 2 cut(s) 195, 211
SchI GAGTC 1 cut(s) 18
SduI GDGCHC 1 cut(s) 68
SetI ASST 3 cut(s) 138, 162, 213
SfaNI GCATC 1 cut(s) 169
SinI GGWCC 1 cut(s) 211
Sse9I AATT 1 cut(s) 111
SsiI CCGC 2 cut(s) 149, 182
SspMI CTAG 1 cut(s) 104
TaiI ACGT 1 cut(s) 162
TaqI TCGA 1 cut(s) 174
TasI AATT 1 cut(s) 111
TauI GCSGC 1 cut(s) 185
TscAI CASTG 1 cut(s) 205
TseFI GTSAC 1 cut(s) 200
Tsp45I GTSAC 1 cut(s) 200
TspDTI ATGAA 3 cut(s) 17, 65, 217
TspRI CASTG 1 cut(s) 205
VpaK11BI GGWCC 1 cut(s) 211
XmnI GAANNNNTTC 1 cut(s) 137
XspI CTAG 1 cut(s) 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.