DJ-1/PfpI family
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom16g10710 |
| rosa_chinensis | RchiOBHm_Chr1g0352931 RchiOBHm_Chr1g0379931 RchiOBHm_Chr2g0127521 RchiOBHm_Chr5g0077921 RchiOBHm_Chr6g0254011 RchiOBHm_Chr7g0224991 |
| rosa_laevigata | RLG00000010747 RLG00000036727 |
| rosa_multiflora | Rmu_co8264081.1_g000001 Rmu_co8475729.1_g000001 Rmu_sc0000512.1_g000010 Rmu_sc0002563.1_g000056 Rmu_sc0003651.1_g000010 Rmu_sc0008382.1_g000016 Rmu_sc0011010.1_g000011 Rmu_sc0014844.1_g000012 Rmu_sc0017063.1_g000001 Rmu_sc0019512.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00012710 Rroxscaffold_7G00161280 |
| rosa_rugosa | Rorug01G0236000 Rorug02G0221700 |
| rosa_samantha | Rh1BG320400 Rh1CG044300 Rh1CG334400 Rh1DG351000 Rh2AG096900 Rh2AG182700 Rh2BG335100 Rh2CG313300 Rh2CG351300 Rh2DG352700 Rh2DG390400 Rh3BG073400 Rh4CG209000 Rh5AG316800 Rh5AG511900 Rh6BG273400 Rh6BG434200 Rh6DG468100 |
| rosa_wichuraiana | Rw2G026410 Rw4G021840 Rw6G023490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 51 |
| AluBI | AGCT | 1 cut(s) | 176 |
| AluI | AGCT | 1 cut(s) | 176 |
| Alw26I | GTCTC | 1 cut(s) | 82 |
| AsuHPI | GGTGA | 2 cut(s) | 25, 40 |
| BceAI | ACGGC | 1 cut(s) | 134 |
| BcoDI | GTCTC | 1 cut(s) | 82 |
| BmiI | GGNNCC | 2 cut(s) | 108, 169 |
| BsaI | GGTCTC | 1 cut(s) | 82 |
| BseMII | CTCAG | 1 cut(s) | 35 |
| BsmAI | GTCTC | 1 cut(s) | 82 |
| Bso31I | GGTCTC | 1 cut(s) | 82 |
| Bsp143I | GATC | 1 cut(s) | 144 |
| BspACI | CCGC | 1 cut(s) | 51 |
| BspCNI | CTCAG | 1 cut(s) | 34 |
| BspLI | GGNNCC | 2 cut(s) | 108, 169 |
| BspTNI | GGTCTC | 1 cut(s) | 82 |
| BssMI | GATC | 1 cut(s) | 144 |
| BstDEI | CTNAG | 1 cut(s) | 21 |
| BstKTI | GATC | 1 cut(s) | 147 |
| BstMAI | GTCTC | 1 cut(s) | 82 |
| BstMBI | GATC | 1 cut(s) | 144 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 146 |
| BtsI | GCAGTG | 1 cut(s) | 147 |
| BtsIMutI | CAGTG | 2 cut(s) | 29, 147 |
| CviJI | RGCY | 4 cut(s) | 130, 170, 176, 191 |
| CviKI_1 | RGCY | 4 cut(s) | 130, 170, 176, 191 |
| DdeI | CTNAG | 1 cut(s) | 21 |
| DpnI | GATC | 1 cut(s) | 146 |
| DpnII | GATC | 1 cut(s) | 144 |
| Eco31I | GGTCTC | 1 cut(s) | 82 |
| FaiI | YATR | 1 cut(s) | 125 |
| HinfI | GANTC | 3 cut(s) | 5, 11, 19 |
| HphI | GGTGA | 2 cut(s) | 25, 40 |
| Hpy166II | GTNNAC | 1 cut(s) | 33 |
| Hpy188I | TCNGA | 3 cut(s) | 10, 87, 111 |
| Hpy8I | GTNNAC | 1 cut(s) | 33 |
| Hpy99I | CGWCG | 1 cut(s) | 155 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 146 |
| HpyF3I | CTNAG | 1 cut(s) | 21 |
| Kzo9I | GATC | 1 cut(s) | 144 |
| LmnI | GCTCC | 1 cut(s) | 167 |
| LpnPI | CCDG | 3 cut(s) | 80, 89, 184 |
| MalI | GATC | 1 cut(s) | 146 |
| MboI | GATC | 1 cut(s) | 144 |
| MlyI | GAGTC | 2 cut(s) | 5, 13 |
| MnlI | CCTC | 5 cut(s) | 56, 64, 84, 102, 130 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 146 |
| NdeII | GATC | 1 cut(s) | 144 |
| NlaIV | GGNNCC | 2 cut(s) | 108, 169 |
| PleI | GAGTC | 2 cut(s) | 5, 13 |
| PpsI | GAGTC | 2 cut(s) | 5, 13 |
| PspN4I | GGNNCC | 2 cut(s) | 108, 169 |
| Sau3AI | GATC | 1 cut(s) | 144 |
| SchI | GAGTC | 2 cut(s) | 5, 13 |
| SetI | ASST | 3 cut(s) | 76, 94, 178 |
| SgeI | CNNG | 6 cut(s) | 25, 79, 99, 116, 176, 183 |
| SsiI | CCGC | 1 cut(s) | 51 |
| TaqI | TCGA | 1 cut(s) | 153 |
| TscAI | CASTG | 2 cut(s) | 29, 147 |
| TspGWI | ACGGA | 2 cut(s) | 88, 180 |
| TspRI | CASTG | 2 cut(s) | 29, 147 |