No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1115000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0330401 RchiOBHm_Chr2g0102551 RchiOBHm_Chr2g0117801 RchiOBHm_Chr4g0389801 RchiOBHm_Chr5g0034931 RchiOBHm_Chr7g0225541 |
| rosa_laevigata | RLG00000010557 RLG00000010558 RLG00000014391 |
| rosa_multiflora | Rmu_co8427689.1_g000001 Rmu_sc0000039.1_g000004 Rmu_sc0000258.1_g000038 Rmu_sc0000706.1_g000005 Rmu_sc0009984.1_g000006 Rmu_sc0017370.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00028750 Rroxscaffold_1G00028760 Rroxscaffold_6G00396980 Rroxscaffold_7G00210170 |
| rosa_rugosa | Rorug02G0238300 Rorug02G0347500 Rorug05G0221100 Rorug07G0270200 |
| rosa_samantha | Rh1DG111200 Rh3BG298700 Rh3CG233300 Rh4AG022100 Rh4AG059200 Rh4AG116300 Rh4CG252100 Rh4CG252200 Rh4DG118500 Rh5DG477900 Rh6AG019300 Rh6BG057600 Rh6BG074100 Rh6BG215700 Rh6BG237700 Rh6CG386400 |
| rosa_wichuraiana | Rw1G015170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 111 |
| AgsI | TTSAA | 2 cut(s) | 241, 248 |
| AluBI | AGCT | 1 cut(s) | 7 |
| AluI | AGCT | 1 cut(s) | 7 |
| ApoI | RAATTY | 1 cut(s) | 111 |
| AsuHPI | GGTGA | 1 cut(s) | 308 |
| BbsI | GAAGAC | 1 cut(s) | 317 |
| BfaI | CTAG | 1 cut(s) | 337 |
| BpiI | GAAGAC | 1 cut(s) | 317 |
| Bpu10I | CCTNAGC | 1 cut(s) | 8 |
| BpuEI | CTTGAG | 2 cut(s) | 5, 14 |
| BsaJI | CCNNGG | 1 cut(s) | 319 |
| BseDI | CCNNGG | 1 cut(s) | 319 |
| BseGI | GGATG | 1 cut(s) | 19 |
| BseMII | CTCAG | 2 cut(s) | 22, 186 |
| Bsp143I | GATC | 2 cut(s) | 16, 36 |
| BspCNI | CTCAG | 2 cut(s) | 21, 187 |
| BssECI | CCNNGG | 1 cut(s) | 319 |
| BssMI | GATC | 2 cut(s) | 16, 36 |
| Bst4CI | ACNGT | 1 cut(s) | 320 |
| BstDEI | CTNAG | 2 cut(s) | 8, 195 |
| BstDSI | CCRYGG | 1 cut(s) | 319 |
| BstF5I | GGATG | 1 cut(s) | 19 |
| BstKTI | GATC | 2 cut(s) | 19, 39 |
| BstMBI | GATC | 2 cut(s) | 16, 36 |
| BstNSI | RCATGY | 4 cut(s) | 191, 222, 229, 236 |
| BstV2I | GAAGAC | 1 cut(s) | 317 |
| BtgI | CCRYGG | 1 cut(s) | 319 |
| BtsCI | GGATG | 1 cut(s) | 19 |
| CviAII | CATG | 6 cut(s) | 152, 188, 219, 226, 233, 309 |
| CviJI | RGCY | 2 cut(s) | 7, 28 |
| CviKI_1 | RGCY | 2 cut(s) | 7, 28 |
| DdeI | CTNAG | 2 cut(s) | 8, 195 |
| DpnI | GATC | 2 cut(s) | 18, 38 |
| DpnII | GATC | 2 cut(s) | 16, 36 |
| DraI | TTTAAA | 2 cut(s) | 106, 120 |
| FaeI | CATG | 6 cut(s) | 155, 191, 222, 229, 236, 312 |
| FaiI | YATR | 7 cut(s) | 153, 189, 212, 220, 227, 234, 310 |
| FatI | CATG | 6 cut(s) | 151, 187, 218, 225, 232, 308 |
| FokI | GGATG | 1 cut(s) | 26 |
| FspBI | CTAG | 1 cut(s) | 337 |
| Hin1II | CATG | 6 cut(s) | 155, 191, 222, 229, 236, 312 |
| HinfI | GANTC | 4 cut(s) | 83, 206, 256, 313 |
| HphI | GGTGA | 1 cut(s) | 308 |
| Hpy188I | TCNGA | 1 cut(s) | 172 |
| Hpy188III | TCNNGA | 2 cut(s) | 22, 31 |
| HpyCH4III | ACNGT | 1 cut(s) | 320 |
| HpyF3I | CTNAG | 2 cut(s) | 8, 195 |
| Hsp92II | CATG | 6 cut(s) | 155, 191, 222, 229, 236, 312 |
| Kzo9I | GATC | 2 cut(s) | 16, 36 |
| LpnPI | CCDG | 3 cut(s) | 72, 145, 254 |
| MaeI | CTAG | 1 cut(s) | 337 |
| MalI | GATC | 2 cut(s) | 18, 38 |
| MboI | GATC | 2 cut(s) | 16, 36 |
| MboII | GAAGA | 2 cut(s) | 46, 317 |
| MfeI | CAATTG | 1 cut(s) | 66 |
| MluCI | AATT | 3 cut(s) | 66, 111, 122 |
| MlyI | GAGTC | 1 cut(s) | 265 |
| MnlI | CCTC | 2 cut(s) | 18, 139 |
| MseI | TTAA | 2 cut(s) | 105, 119 |
| MunI | CAATTG | 1 cut(s) | 66 |
| NdeII | GATC | 2 cut(s) | 16, 36 |
| NlaIII | CATG | 6 cut(s) | 155, 191, 222, 229, 236, 312 |
| NspI | RCATGY | 4 cut(s) | 191, 222, 229, 236 |
| PfeI | GAWTC | 3 cut(s) | 83, 206, 313 |
| PleI | GAGTC | 1 cut(s) | 264 |
| PpsI | GAGTC | 1 cut(s) | 264 |
| SaqAI | TTAA | 2 cut(s) | 105, 119 |
| Sau3AI | GATC | 2 cut(s) | 16, 36 |
| SchI | GAGTC | 1 cut(s) | 265 |
| SetI | ASST | 2 cut(s) | 9, 131 |
| SmlI | CTYRAG | 2 cut(s) | 20, 29 |
| SmoI | CTYRAG | 2 cut(s) | 20, 29 |
| Sse9I | AATT | 3 cut(s) | 66, 111, 122 |
| SspMI | CTAG | 1 cut(s) | 337 |
| TaaI | ACNGT | 1 cut(s) | 320 |
| TaqI | TCGA | 1 cut(s) | 328 |
| TasI | AATT | 3 cut(s) | 66, 111, 122 |
| TfiI | GAWTC | 3 cut(s) | 83, 206, 313 |
| Tru1I | TTAA | 2 cut(s) | 105, 119 |
| Tru9I | TTAA | 2 cut(s) | 105, 119 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XapI | RAATTY | 1 cut(s) | 111 |
| XceI | RCATGY | 4 cut(s) | 191, 222, 229, 236 |
| XspI | CTAG | 1 cut(s) | 337 |