Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002552

Physical Location & Seq

Genomic Coordinates Forward (+)

22744712 .. 22746530

Gene Structure 1819 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0221100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGGATTGAAACACCAAACTTGCAAAAGCTCTTCATCTTCTAACTTCATGCCTATTAGATTCTCAACCATTCTCACTTTGATTCTACTCTTTACTTCCTTTTTCCTCTTCCTTTCATCACTCAAGAACACCCAAGAACCATTTTTTGGGGGTGATGAGAACACTCAATTCAATGGTGATCTTAGAGATGCTAAATTCCCATGGAACAAACTCTGTTTCGGTCCTTCTTTCGAAAAGCTCAAGCTAGCCGTCTTCTCCAAAACATGGCCAGTTGGTGCAGACGCGGGTGGTATGGAGCGCCATGCTTCCACATTGTACCAAGCACTTGCTACAAAGGGTCATGAGATTCATGTCTTCACTGTGCCTTCAGATAGGAGGCCTCATTGGGACATACATGAAGGTAACCTTCATGTTTATTTTGCAGCTAATGATCATGGCTCTGTTAATTGTTCTCTAGCGTTTGAAATTTTCAATAAAGTTAACTCGGATGGGGCATTCGATTATGTGCACACCGAGAGTGTTTCGTTGCCTTATTGGCGTGCGAAGATGCTGCCTAATGTGGCTGTCACTTGGCATGGGATATGGTACGAAATAATGCATTCCAAGTTACTGCAACAACTCCTCACCGACCCAAATGGGGATATGCTAGAGCCCATGACAGAGCTTCAAGAAGCAATGCCAAGGCTCGTTGAGGAGATTCGGTTCTTTAAGAGCTATACGCAGCATATATGCATAAGCAATAGTGCTGGTGAGGTTCTGGTCAACATCTATCAGATCCCACAGAGAAATGTGCATGTCATACTTAATGGCGTTGATGAGACAGAATTTGTGCCAGACCAAGAAGCAGGTGCAAGGTTCCGACAAAAACACGGTGTGCCTGCCAATGTGAGCCTTGTGATGGGAGTGGCAGGGCGGCTGGTTAGGGACAAAGGGCATCCACTTCTTTACAAAGCCTTTTCTTCAATTGTGAAACGCAACCCCGGCGTGTTTTTGCTTGTGGCAGGGTCAGGTCCTTGGAGAAGAAGGTATGCTGAATTAGGCCCAAATGTGAAGGTTCTAGGAGCATTGGAGCCATTGGAGCTGTCTAAGTTTTACAATGCTCTTGATCTGTTTGTGAACCCCACATTGAGGCCCCAAGGGCTTGATCTAACATTGATTGAAGCAATGCAAAGTGGGAAGACAGTTCTAACTCCAAACTATCCAAGCATTGTTGGGACAGTGGTGGTGGGTGAAGAATTTGGATACACTTTTTCACCCAATGTCAAGTCTTTTGTTGAGGCTTTGGAGTCGGCCATAAAAGATGGGTCTAATGTGCTGAAGAAGAAAGGGGTGGCTTGCAAAAATTATGTGCATTCGATGTTCACTGCAACTAAGATGGCATCGGCTTATGAGCGGTTCTTTCTGTGCATGAAGAACCCAAAATACTGTCAGTACCCTCTTTCCACTGATTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009987 GO:0010467 GO:0015935 GO:0016020 GO:0019538 GO:0022613 GO:0022626 GO:0022627 GO:0030054 GO:0030312 GO:0031090 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0042254 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0070013 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0098588 GO:0098805 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_S13

Protein Analysis

484

Amino Acids

54.32

Weight (kDa)

8.28

Isoelectric Point (pI)

37.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_4	PF13439	96 - 273	2.6e-16	Glycosyltransferase Family 4
Glyco_trans_4_4	PF13579	96 - 270	2.4e-07	Glycosyl transferase 4-like domain
Glycos_transf_1	PF00534	298 - 435	5.3e-19	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	299 - 434	2.7e-18	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002552)

Species	Orthologous Gene IDs
malus_domestica	MD14G1115000.v1.1
rosa_chinensis	RchiOBHm_Chr1g0330401 RchiOBHm_Chr2g0102551 RchiOBHm_Chr2g0117801 RchiOBHm_Chr4g0389801 RchiOBHm_Chr5g0034931 RchiOBHm_Chr7g0225541
rosa_laevigata	RLG00000010557 RLG00000010558 RLG00000014391
rosa_multiflora	Rmu_co8427689.1_g000001 Rmu_sc0000039.1_g000004 Rmu_sc0000258.1_g000038 Rmu_sc0000706.1_g000005 Rmu_sc0009984.1_g000006 Rmu_sc0017370.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028750 Rroxscaffold_1G00028760 Rroxscaffold_6G00396980 Rroxscaffold_7G00210170
rosa_rugosa	Rorug02G0238300 Rorug02G0347500 Rorug05G0221100 Rorug07G0270200
rosa_samantha	Rh1DG111200 Rh3BG298700 Rh3CG233300 Rh4AG022100 Rh4AG059200 Rh4AG116300 Rh4CG252100 Rh4CG252200 Rh4DG118500 Rh5DG477900 Rh6AG019300 Rh6BG057600 Rh6BG074100 Rh6BG215700 Rh6BG237700 Rh6CG386400
rosa_wichuraiana	Rw1G015170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	836
Acc36I	ACCTGC	1 cut(s)	836
AccB7I	CCANNNNNTGG	2 cut(s)	146, 264
AccBSI	CCGCTC	1 cut(s)	1393
AccII	CGCG	1 cut(s)	284
AciI	CCGC	3 cut(s)	284, 913, 1393
AclWI	GGATC	1 cut(s)	769
AcoI	YGGCCR	2 cut(s)	266, 1290
AcsI	RAATTY	4 cut(s)	194, 465, 824, 1235
AcuI	CTGAAG	2 cut(s)	351, 1337
AdeI	CACNNNGTG	1 cut(s)	874
AfaI	GTAC	3 cut(s)	317, 587, 1433
AfiI	CCNNNNNNNGG	5 cut(s)	146, 264, 637, 898, 1128
AgsI	TTSAA	7 cut(s)	10, 172, 464, 472, 668, 963, 1160
AjuI	GAANNNNNNNTTGG	2 cut(s)	129, 161
AloI	GAACNNNNNNTCC	2 cut(s)	686, 718
AluBI	AGCT	7 cut(s)	30, 238, 244, 425, 664, 714, 1081
AluI	AGCT	7 cut(s)	30, 238, 244, 425, 664, 714, 1081
Alw21I	GWGCWC	1 cut(s)	510
Alw26I	GTCTC	1 cut(s)	812
Alw44I	GTGCAC	1 cut(s)	506
AlwI	GGATC	1 cut(s)	769
AoxI	GGCC	5 cut(s)	266, 377, 1039, 1130, 1290
ApaLI	GTGCAC	1 cut(s)	506
ApeKI	GCWGC	3 cut(s)	422, 550, 721
ApoI	RAATTY	4 cut(s)	194, 465, 824, 1235
AspLEI	GCGC	1 cut(s)	300
AspS9I	GGNCC	4 cut(s)	221, 1010, 1040, 1131
AsuC2I	CCSGG	1 cut(s)	981
AsuHPI	GGTGA	6 cut(s)	164, 188, 616, 761, 1241, 1245
AsuII	TTCGAA	1 cut(s)	231
AsuNHI	GCTAGC	1 cut(s)	244
AvaII	GGWCC	2 cut(s)	221, 1010
BaeGI	GKGCMC	1 cut(s)	510
BalI	TGGCCA	1 cut(s)	268
BanII	GRGCYC	1 cut(s)	654
BbsI	GAAGAC	3 cut(s)	244, 346, 1184
Bbv12I	GWGCWC	1 cut(s)	510
BbvI	GCAGC	3 cut(s)	434, 537, 733
BccI	CCATC	4 cut(s)	482, 892, 1295, 1369
BceAI	ACGGC	1 cut(s)	233
BcgI	CGANNNNNNTGC	2 cut(s)	532, 566
BciVI	GTATCC	1 cut(s)	1235
BclI	TGATCA	1 cut(s)	430
BcnI	CCSGG	1 cut(s)	981
BcoDI	GTCTC	1 cut(s)	812
BfaI	CTAG	4 cut(s)	245, 455, 647, 1058
BfoI	RGCGCY	1 cut(s)	301
BfuAI	ACCTGC	1 cut(s)	836
BfuI	GTATCC	1 cut(s)	1235
BglI	GCCNNNNNGGC	2 cut(s)	535, 1138
BisI	GCNGC	4 cut(s)	423, 551, 722, 914
BlsI	GCNGC	4 cut(s)	424, 552, 723, 915
Bme1390I	CCNGG	1 cut(s)	981
Bme18I	GGWCC	2 cut(s)	221, 1010
BmgT120I	GGNCC	4 cut(s)	221, 1010, 1040, 1131
BmiI	GGNNCC	3 cut(s)	857, 1071, 1133
BmrFI	CCNGG	1 cut(s)	981
BmsI	GCATC	4 cut(s)	178, 537, 943, 1388
BmtI	GCTAGC	1 cut(s)	248
BpiI	GAAGAC	3 cut(s)	244, 346, 1184
Bpu14I	TTCGAA	1 cut(s)	231
BpuEI	CTTGAG	2 cut(s)	107, 224
BpuMI	CCSGG	1 cut(s)	981
BsaJI	CCNNGG	5 cut(s)	200, 680, 979, 1013, 1135
BsaXI	ACNNNNNCTCC	2 cut(s)	686, 716
Bsc4I	CCNNNNNNNGG	5 cut(s)	146, 264, 637, 898, 1128
Bse1I	ACTGG	1 cut(s)	269
Bse3DI	GCAATG	2 cut(s)	681, 1170
BseDI	CCNNGG	5 cut(s)	200, 680, 979, 1013, 1135
BseGI	GGATG	2 cut(s)	493, 934
BseLI	CCNNNNNNNGG	5 cut(s)	146, 264, 637, 898, 1128
BseMI	GCAATG	2 cut(s)	681, 1170
BseNI	ACTGG	1 cut(s)	269
BseRI	GAGGAG	2 cut(s)	611, 707
BseSI	GKGCMC	1 cut(s)	510
BseXI	GCAGC	3 cut(s)	434, 537, 733
BsgI	GTGCAG	1 cut(s)	297
Bsh1236I	CGCG	1 cut(s)	284
BshFI	GGCC	5 cut(s)	268, 379, 1041, 1132, 1292
BsiHKAI	GWGCWC	1 cut(s)	510
BsiSI	CCGG	1 cut(s)	981
BslFI	GGGAC	3 cut(s)	401, 938, 1228
BslI	CCNNNNNNNGG	5 cut(s)	146, 264, 637, 898, 1128
BsmAI	GTCTC	1 cut(s)	812
BsmFI	GGGAC	3 cut(s)	401, 938, 1228
BsmI	GAATGC	3 cut(s)	494, 598, 1351
BsnI	GGCC	5 cut(s)	268, 379, 1041, 1132, 1292
Bsp119I	TTCGAA	1 cut(s)	231
Bsp1286I	GDGCHC	2 cut(s)	510, 654
Bsp143I	GATC	5 cut(s)	178, 430, 774, 1105, 1144
Bsp19I	CCATGG	1 cut(s)	200
BspACI	CCGC	3 cut(s)	284, 913, 1393
BspANI	GGCC	5 cut(s)	268, 379, 1041, 1132, 1292
BspFNI	CGCG	1 cut(s)	284
BspHI	TCATGA	1 cut(s)	340
BspLI	GGNNCC	3 cut(s)	857, 1071, 1133
BspMI	ACCTGC	1 cut(s)	836
BspOI	GCTAGC	1 cut(s)	248
BspPI	GGATC	1 cut(s)	769
BspQI	GCTCTTC	1 cut(s)	37
BspT104I	TTCGAA	1 cut(s)	231
BsrBI	CCGCTC	1 cut(s)	1393
BsrDI	GCAATG	2 cut(s)	681, 1170
BsrI	ACTGG	1 cut(s)	269
BssECI	CCNNGG	5 cut(s)	200, 680, 979, 1013, 1135
BssMI	GATC	5 cut(s)	178, 430, 774, 1105, 1144
BssT1I	CCWWGG	4 cut(s)	200, 680, 1013, 1135
Bst4CI	ACNGT	5 cut(s)	361, 872, 1183, 1219, 1427
Bst6I	CTCTTC	2 cut(s)	37, 113
BstBI	TTCGAA	1 cut(s)	231
BstC8I	GCNNGC	4 cut(s)	246, 540, 879, 1336
BstDEI	CTNAG	3 cut(s)	182, 1086, 1371
BstDSI	CCRYGG	1 cut(s)	200
BstEII	GGTNACC	1 cut(s)	401
BstF5I	GGATG	2 cut(s)	493, 934
BstFNI	CGCG	1 cut(s)	284
BstH2I	RGCGCY	1 cut(s)	301
BstHHI	GCGC	1 cut(s)	300
BstKTI	GATC	5 cut(s)	181, 433, 777, 1108, 1147
BstMAI	GTCTC	1 cut(s)	812
BstMBI	GATC	5 cut(s)	178, 430, 774, 1105, 1144
BstMWI	GCNNNNNNNGC	4 cut(s)	535, 981, 1078, 1138
BstNSI	RCATGY	1 cut(s)	797
BstPI	GGTNACC	1 cut(s)	401
BstSCI	CCNGG	1 cut(s)	979
BstSLI	GKGCMC	1 cut(s)	510
BstUI	CGCG	1 cut(s)	284
BstV1I	GCAGC	3 cut(s)	434, 537, 733
BstV2I	GAAGAC	3 cut(s)	244, 346, 1184
BstX2I	RGATCY	1 cut(s)	774
BstYI	RGATCY	1 cut(s)	774
BsuI	GTATCC	1 cut(s)	1235
BsuRI	GGCC	5 cut(s)	268, 379, 1041, 1132, 1292
BtgI	CCRYGG	1 cut(s)	200
BtsCI	GGATG	2 cut(s)	493, 934
BtsI	GCAGTG	1 cut(s)	1362
BtsIMutI	CAGTG	4 cut(s)	357, 1224, 1362, 1443
BveI	ACCTGC	1 cut(s)	836
Cac8I	GCNNGC	4 cut(s)	246, 540, 879, 1336
CciI	TCATGA	1 cut(s)	340
CfoI	GCGC	1 cut(s)	300
Cfr13I	GGNCC	4 cut(s)	221, 1010, 1040, 1131
CseI	GACGC	1 cut(s)	290
Csp6I	GTAC	3 cut(s)	316, 586, 1432
CviQI	GTAC	3 cut(s)	316, 586, 1432
DdeI	CTNAG	3 cut(s)	182, 1086, 1371
DpnI	GATC	5 cut(s)	180, 432, 776, 1107, 1146
DpnII	GATC	5 cut(s)	178, 430, 774, 1105, 1144
DraIII	CACNNNGTG	1 cut(s)	874
EaeI	YGGCCR	2 cut(s)	266, 1290
Eam1104I	CTCTTC	2 cut(s)	37, 113
EarI	CTCTTC	2 cut(s)	37, 113
Eco130I	CCWWGG	4 cut(s)	200, 680, 1013, 1135
Eco147I	AGGCCT	1 cut(s)	379
Eco24I	GRGCYC	1 cut(s)	654
Eco47I	GGWCC	2 cut(s)	221, 1010
Eco57I	CTGAAG	2 cut(s)	351, 1337
Eco91I	GGTNACC	1 cut(s)	401
EcoO109I	RGGNCCY	2 cut(s)	1010, 1131
EcoO65I	GGTNACC	1 cut(s)	401
EcoT14I	CCWWGG	4 cut(s)	200, 680, 1013, 1135
EcoT22I	ATGCAT	2 cut(s)	600, 734
EcoT38I	GRGCYC	1 cut(s)	654
ErhI	CCWWGG	4 cut(s)	200, 680, 1013, 1135
FalI	AAGNNNNNCTT	2 cut(s)	390, 422
FaqI	GGGAC	3 cut(s)	401, 938, 1228
FauI	CCCGC	1 cut(s)	277
FbaI	TGATCA	1 cut(s)	430
Fnu4HI	GCNGC	4 cut(s)	423, 551, 722, 914
FokI	GGATG	2 cut(s)	500, 921
FriOI	GRGCYC	1 cut(s)	654
Fsp4HI	GCNGC	4 cut(s)	423, 551, 722, 914
FspBI	CTAG	4 cut(s)	245, 455, 647, 1058
GlaI	GCGC	1 cut(s)	299
GluI	GCNGC	4 cut(s)	423, 551, 722, 914
HaeII	RGCGCY	1 cut(s)	301
HaeIII	GGCC	5 cut(s)	268, 379, 1041, 1132, 1292
HapII	CCGG	1 cut(s)	981
HgaI	GACGC	1 cut(s)	290
HhaI	GCGC	1 cut(s)	300
Hin6I	GCGC	1 cut(s)	298
HinP1I	GCGC	1 cut(s)	298
HincII	GTYRAC	2 cut(s)	481, 763
HindII	GTYRAC	2 cut(s)	481, 763
HinfI	GANTC	5 cut(s)	60, 82, 346, 697, 1286
HpaI	GTTAAC	1 cut(s)	481
HpaII	CCGG	1 cut(s)	981
HphI	GGTGA	6 cut(s)	164, 188, 616, 761, 1241, 1245
Hpy166II	GTNNAC	5 cut(s)	481, 508, 763, 1117, 1362
Hpy188I	TCNGA	4 cut(s)	370, 487, 774, 860
Hpy188III	TCNNGA	4 cut(s)	124, 341, 668, 1103
Hpy8I	GTNNAC	5 cut(s)	481, 508, 763, 1117, 1362
HpyAV	CCTTC	6 cut(s)	234, 375, 392, 416, 1017, 1045
HpyCH4III	ACNGT	5 cut(s)	361, 872, 1183, 1219, 1427
HpyF10VI	GCNNNNNNNGC	4 cut(s)	535, 981, 1078, 1138
HpyF3I	CTNAG	3 cut(s)	182, 1086, 1371
HspAI	GCGC	1 cut(s)	298
Ksp22I	TGATCA	1 cut(s)	430
KspAI	GTTAAC	1 cut(s)	481
Kzo9I	GATC	5 cut(s)	178, 430, 774, 1105, 1144
LguI	GCTCTTC	1 cut(s)	37
LmnI	GCTCC	4 cut(s)	295, 1061, 1069, 1078
Lsp1109I	GCAGC	3 cut(s)	434, 537, 733
LweI	GCATC	4 cut(s)	178, 537, 943, 1388
MaeI	CTAG	4 cut(s)	245, 455, 647, 1058
MaeIII	GTNAC	3 cut(s)	401, 565, 606
MalI	GATC	5 cut(s)	180, 432, 776, 1107, 1146
MbiI	CCGCTC	1 cut(s)	1393
MboI	GATC	5 cut(s)	178, 430, 774, 1105, 1144
MfeI	CAATTG	1 cut(s)	963
MflI	RGATCY	1 cut(s)	774
MhlI	GDGCHC	2 cut(s)	510, 654
MlsI	TGGCCA	1 cut(s)	268
MluCI	AATT	9 cut(s)	167, 194, 445, 465, 824, 963, 1034, 1235, 1342
MluNI	TGGCCA	1 cut(s)	268
MlyI	GAGTC	1 cut(s)	1295
MmeI	TCCRAC	1 cut(s)	883
MnlI	CCTC	9 cut(s)	116, 369, 390, 632, 685, 745, 1122, 1270, 1446
Mox20I	TGGCCA	1 cut(s)	268
Mph1103I	ATGCAT	2 cut(s)	600, 734
MscI	TGGCCA	1 cut(s)	268
MseI	TTAA	4 cut(s)	444, 480, 708, 804
Msp20I	TGGCCA	1 cut(s)	268
MspI	CCGG	1 cut(s)	981
MspR9I	CCNGG	1 cut(s)	981
MunI	CAATTG	1 cut(s)	963
Mva1269I	GAATGC	3 cut(s)	494, 598, 1351
MvnI	CGCG	1 cut(s)	284
MwoI	GCNNNNNNNGC	4 cut(s)	535, 981, 1078, 1138
NciI	CCSGG	1 cut(s)	981
NcoI	CCATGG	1 cut(s)	200
NdeII	GATC	5 cut(s)	178, 430, 774, 1105, 1144
NheI	GCTAGC	1 cut(s)	244
NlaIV	GGNNCC	3 cut(s)	857, 1071, 1133
NmuCI	GTSAC	1 cut(s)	565
NsiI	ATGCAT	2 cut(s)	600, 734
NspI	RCATGY	1 cut(s)	797
NspV	TTCGAA	1 cut(s)	231
PagI	TCATGA	1 cut(s)	340
PaqCI	CACCTGC	1 cut(s)	836
PceI	AGGCCT	1 cut(s)	379
PciSI	GCTCTTC	1 cut(s)	37
PctI	GAATGC	3 cut(s)	494, 598, 1351
PfeI	GAWTC	4 cut(s)	60, 82, 346, 697
PflMI	CCANNNNNTGG	2 cut(s)	146, 264
PkrI	GCNGC	4 cut(s)	424, 552, 723, 915
PleI	GAGTC	1 cut(s)	1294
PpsI	GAGTC	1 cut(s)	1294
PpuMI	RGGWCCY	1 cut(s)	1010
Psp5II	RGGWCCY	1 cut(s)	1010
PspEI	GGTNACC	1 cut(s)	401
PspN4I	GGNNCC	3 cut(s)	857, 1071, 1133
PspPI	GGNCC	4 cut(s)	221, 1010, 1040, 1131
PspPPI	RGGWCCY	1 cut(s)	1010
PsrI	GAACNNNNNNTAC	2 cut(s)	1406, 1438
PsuI	RGATCY	1 cut(s)	774
RsaI	GTAC	3 cut(s)	317, 587, 1433
RsaNI	GTAC	3 cut(s)	316, 586, 1432
SapI	GCTCTTC	1 cut(s)	37
SaqAI	TTAA	4 cut(s)	444, 480, 708, 804
SatI	GCNGC	4 cut(s)	423, 551, 722, 914
Sau3AI	GATC	5 cut(s)	178, 430, 774, 1105, 1144
Sau96I	GGNCC	4 cut(s)	221, 1010, 1040, 1131
SchI	GAGTC	1 cut(s)	1295
ScrFI	CCNGG	1 cut(s)	981
SduI	GDGCHC	2 cut(s)	510, 654
SfaNI	GCATC	4 cut(s)	178, 537, 943, 1388
SfuI	TTCGAA	1 cut(s)	231
SinI	GGWCC	2 cut(s)	221, 1010
SmlI	CTYRAG	2 cut(s)	122, 239
SmoI	CTYRAG	2 cut(s)	122, 239
Sse9I	AATT	9 cut(s)	167, 194, 445, 465, 824, 963, 1034, 1235, 1342
SseBI	AGGCCT	1 cut(s)	379
SsiI	CCGC	3 cut(s)	284, 913, 1393
SspMI	CTAG	4 cut(s)	245, 455, 647, 1058
StuI	AGGCCT	1 cut(s)	379
StyD4I	CCNGG	1 cut(s)	979
StyI	CCWWGG	4 cut(s)	200, 680, 1013, 1135
TaaI	ACNGT	5 cut(s)	361, 872, 1183, 1219, 1427
TaqI	TCGA	3 cut(s)	231, 498, 1355
TaqII	GACCGA	1 cut(s)	209
TasI	AATT	9 cut(s)	167, 194, 445, 465, 824, 963, 1034, 1235, 1342
TauI	GCSGC	1 cut(s)	916
TfiI	GAWTC	4 cut(s)	60, 82, 346, 697
Tru1I	TTAA	4 cut(s)	444, 480, 708, 804
Tru9I	TTAA	4 cut(s)	444, 480, 708, 804
TscAI	CASTG	4 cut(s)	364, 1224, 1369, 1450
TseFI	GTSAC	1 cut(s)	565
TseI	GCWGC	3 cut(s)	422, 550, 721
Tsp45I	GTSAC	1 cut(s)	565
TspDTI	ATGAA	7 cut(s)	24, 37, 105, 338, 398, 411, 1424
TspRI	CASTG	4 cut(s)	364, 1224, 1369, 1450
Van91I	CCANNNNNTGG	2 cut(s)	146, 264
VneI	GTGCAC	1 cut(s)	506
VpaK11BI	GGWCC	2 cut(s)	221, 1010
XapI	RAATTY	4 cut(s)	194, 465, 824, 1235
XceI	RCATGY	1 cut(s)	797
XspI	CTAG	4 cut(s)	245, 455, 647, 1058
Zsp2I	ATGCAT	2 cut(s)	600, 734

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.