RchiOBHm_Chr5g0075631

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
81416965 .. 81417248
284 bp
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UTR
Exon/CDS
Intron
PRQ35034

Sequence Viewer

Length: 177 bp
ATGAGGCTTAAATGTGATGGAATTGCTTGCAGCATGGCTACTGATGGGAAGGATATTGTTCCATTGCCGACAGCTCCAGTTGAACCAGACCCATCAGTGCCAATTGGGCCAACAGCTCCAACATCTGCTCATCCTCACAGAGCATTGTTTAGCCTCCGTCGCTTGATTTGTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

58

Amino Acids

6.19

Weight (kDa)

7.76

Isoelectric Point (pI)

52.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 83
AluBI AGCT 2 cut(s) 74, 116
AluI AGCT 2 cut(s) 74, 116
AoxI GGCC 1 cut(s) 107
ApeKI GCWGC 1 cut(s) 30
AspS9I GGNCC 1 cut(s) 107
BbvI GCAGC 1 cut(s) 42
BccI CCATC 3 cut(s) 11, 38, 100
BglI GCCNNNNNGGC 1 cut(s) 106
BisI GCNGC 1 cut(s) 31
BlsI GCNGC 1 cut(s) 32
BmgT120I GGNCC 1 cut(s) 107
BpmI CTGGAG 1 cut(s) 60
Bse1I ACTGG 1 cut(s) 77
Bse3DI GCAATG 1 cut(s) 62
BseGI GGATG 1 cut(s) 130
BseMI GCAATG 1 cut(s) 62
BseNI ACTGG 1 cut(s) 77
BseXI GCAGC 1 cut(s) 42
BshFI GGCC 1 cut(s) 109
BsnI GGCC 1 cut(s) 109
BspANI GGCC 1 cut(s) 109
BsrDI GCAATG 1 cut(s) 62
BsrI ACTGG 1 cut(s) 77
BstC8I GCNNGC 1 cut(s) 28
BstF5I GGATG 1 cut(s) 130
BstMWI GCNNNNNNNGC 2 cut(s) 106, 159
BstV1I GCAGC 1 cut(s) 42
BsuRI GGCC 1 cut(s) 109
BtsCI GGATG 1 cut(s) 130
BtsIMutI CAGTG 1 cut(s) 102
Cac8I GCNNGC 1 cut(s) 28
Cfr13I GGNCC 1 cut(s) 107
CviAII CATG 1 cut(s) 34
CviJI RGCY 6 cut(s) 7, 38, 74, 109, 116, 153
CviKI_1 RGCY 6 cut(s) 7, 38, 74, 109, 116, 153
FaeI CATG 1 cut(s) 37
FaiI YATR 1 cut(s) 35
FatI CATG 1 cut(s) 33
Fnu4HI GCNGC 1 cut(s) 31
FokI GGATG 1 cut(s) 117
Fsp4HI GCNGC 1 cut(s) 31
GluI GCNGC 1 cut(s) 31
GsuI CTGGAG 1 cut(s) 60
HaeIII GGCC 1 cut(s) 109
Hin1II CATG 1 cut(s) 37
Hpy99I CGWCG 1 cut(s) 162
HpyAV CCTTC 1 cut(s) 43
HpyCH4V TGCA 1 cut(s) 30
HpyF10VI GCNNNNNNNGC 2 cut(s) 106, 159
Hsp92II CATG 1 cut(s) 37
LmnI GCTCC 2 cut(s) 79, 121
LpnPI CCDG 2 cut(s) 90, 99
Lsp1109I GCAGC 1 cut(s) 42
MfeI CAATTG 1 cut(s) 102
MluCI AATT 2 cut(s) 21, 102
MmeI TCCRAC 1 cut(s) 143
MnlI CCTC 2 cut(s) 144, 164
MseI TTAA 1 cut(s) 9
MunI CAATTG 1 cut(s) 102
MwoI GCNNNNNNNGC 2 cut(s) 106, 159
NlaIII CATG 1 cut(s) 37
PkrI GCNGC 1 cut(s) 32
PspPI GGNCC 1 cut(s) 107
SaqAI TTAA 1 cut(s) 9
SatI GCNGC 1 cut(s) 31
Sau96I GGNCC 1 cut(s) 107
SetI ASST 2 cut(s) 76, 118
SgeI CNNG 4 cut(s) 39, 46, 89, 98
Sse9I AATT 2 cut(s) 21, 102
TasI AATT 2 cut(s) 21, 102
Tru1I TTAA 1 cut(s) 9
Tru9I TTAA 1 cut(s) 9
TscAI CASTG 1 cut(s) 102
TseI GCWGC 1 cut(s) 30
TspGWI ACGGA 1 cut(s) 146
TspRI CASTG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.