Rmu_sc0003010.1_g000001

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003010.1
Physical Location & Seq
Reverse (-)
1 .. 555
555 bp
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UTR
Exon/CDS
Intron
Rmu_sc0003010.1_g000001.1.cds

Sequence Viewer

Length: 286 bp
atgtccgatgtctgggcacactttgagaagtttgatagggcaattacagaagttgtggatggaaagaagcaggaagttggacgtgaagtaagagcaaagtgcaggtattgtgaaactgaccttgctggagattcttcttttagtggcactagcactttaagaaggcacattgagattgtatgcaaaaaatacccgggtagggctgatatagaggggcagcaggttttaactagtgatgggatggcttcccgtactctagtgtctagaacttggactgaagatgcat

Protein Analysis

95

Amino Acids

10.71

Weight (kDa)

6.1

Isoelectric Point (pI)

49.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 93, 211
AfaI GTAC 1 cut(s) 253
AfiI CCNNNNNNNGG 2 cut(s) 12, 199
AhlI ACTAGT 1 cut(s) 230
AjiI CACGTC 1 cut(s) 83
Ama87I CYCGRG 1 cut(s) 193
ApeKI GCWGC 1 cut(s) 217
AsuC2I CCSGG 2 cut(s) 194, 195
AvaI CYCGRG 1 cut(s) 193
BaeGI GKGCMC 1 cut(s) 19
BbvI GCAGC 1 cut(s) 229
BccI CCATC 3 cut(s) 53, 230, 235
BcnI CCSGG 2 cut(s) 194, 195
BcuI ACTAGT 1 cut(s) 230
BfaI CTAG 4 cut(s) 150, 231, 257, 264
BfuAI ACCTGC 2 cut(s) 93, 211
BisI GCNGC 1 cut(s) 218
BlsI GCNGC 1 cut(s) 219
Bme1390I CCNGG 2 cut(s) 194, 195
BmeT110I CYCGRG 1 cut(s) 193
BmgBI CACGTC 1 cut(s) 83
BmrFI CCNGG 2 cut(s) 194, 195
BmsI GCATC 1 cut(s) 271
BpmI CTGGAG 1 cut(s) 147
BpuMI CCSGG 2 cut(s) 194, 195
BsaJI CCNNGG 1 cut(s) 193
Bsc4I CCNNNNNNNGG 2 cut(s) 12, 199
BseDI CCNNGG 1 cut(s) 193
BseGI GGATG 2 cut(s) 64, 246
BseLI CCNNNNNNNGG 2 cut(s) 12, 199
BseSI GKGCMC 1 cut(s) 19
BseXI GCAGC 1 cut(s) 229
BsgI GTGCAG 1 cut(s) 121
BsiHKCI CYCGRG 1 cut(s) 193
BsiSI CCGG 1 cut(s) 194
BslI CCNNNNNNNGG 2 cut(s) 12, 199
BsoBI CYCGRG 1 cut(s) 193
Bsp1286I GDGCHC 1 cut(s) 19
BspMI ACCTGC 2 cut(s) 93, 211
BssECI CCNNGG 1 cut(s) 193
BstF5I GGATG 2 cut(s) 64, 246
BstSCI CCNGG 2 cut(s) 192, 193
BstSLI GKGCMC 1 cut(s) 19
BstV1I GCAGC 1 cut(s) 229
BtrI CACGTC 1 cut(s) 83
BtsCI GGATG 2 cut(s) 64, 246
BveI ACCTGC 2 cut(s) 93, 211
Cfr9I CCCGGG 1 cut(s) 193
Csp6I GTAC 1 cut(s) 252
CviJI RGCY 2 cut(s) 203, 245
CviKI_1 RGCY 2 cut(s) 203, 245
CviQI GTAC 1 cut(s) 252
Eco88I CYCGRG 1 cut(s) 193
EcoT22I ATGCAT 1 cut(s) 286
FaiI YATR 2 cut(s) 181, 209
Fnu4HI GCNGC 1 cut(s) 218
FokI GGATG 2 cut(s) 71, 253
Fsp4HI GCNGC 1 cut(s) 218
FspBI CTAG 4 cut(s) 150, 231, 257, 264
GluI GCNGC 1 cut(s) 218
GsuI CTGGAG 1 cut(s) 147
HapII CCGG 1 cut(s) 194
HinfI GANTC 1 cut(s) 131
HpaII CCGG 1 cut(s) 194
Hpy188I TCNGA 1 cut(s) 7
Hpy188III TCNNGA 1 cut(s) 264
HpyAV CCTTC 1 cut(s) 156
HpyCH4IV ACGT 1 cut(s) 82
HpyCH4V TGCA 3 cut(s) 102, 183, 284
HpySE526I ACGT 1 cut(s) 82
LpnPI CCDG 5 cut(s) 56, 88, 111, 206, 207
Lsp1109I GCAGC 1 cut(s) 229
LweI GCATC 1 cut(s) 271
MaeI CTAG 4 cut(s) 150, 231, 257, 264
MaeII ACGT 1 cut(s) 82
MboII GAAGA 1 cut(s) 126
MhlI GDGCHC 1 cut(s) 19
MluCI AATT 1 cut(s) 42
MmeI TCCRAC 1 cut(s) 58
MnlI CCTC 1 cut(s) 205
Mph1103I ATGCAT 1 cut(s) 286
MseI TTAA 2 cut(s) 158, 227
MspI CCGG 1 cut(s) 194
MspR9I CCNGG 2 cut(s) 194, 195
NciI CCSGG 2 cut(s) 194, 195
NsiI ATGCAT 1 cut(s) 286
PfeI GAWTC 1 cut(s) 131
PkrI GCNGC 1 cut(s) 219
RsaI GTAC 1 cut(s) 253
RsaNI GTAC 1 cut(s) 252
SaqAI TTAA 2 cut(s) 158, 227
SatI GCNGC 1 cut(s) 218
ScrFI CCNGG 2 cut(s) 194, 195
SduI GDGCHC 1 cut(s) 19
SetI ASST 4 cut(s) 85, 107, 123, 225
SfaNI GCATC 1 cut(s) 271
SmaI CCCGGG 1 cut(s) 195
SpeI ACTAGT 1 cut(s) 230
Sse9I AATT 1 cut(s) 42
SspMI CTAG 4 cut(s) 150, 231, 257, 264
StyD4I CCNGG 2 cut(s) 192, 193
TaiI ACGT 1 cut(s) 85
TasI AATT 1 cut(s) 42
TfiI GAWTC 1 cut(s) 131
Tru1I TTAA 2 cut(s) 158, 227
Tru9I TTAA 2 cut(s) 158, 227
TseI GCWGC 1 cut(s) 217
TspMI CCCGGG 1 cut(s) 193
XbaI TCTAGA 1 cut(s) 263
XmaI CCCGGG 1 cut(s) 193
XspI CTAG 4 cut(s) 150, 231, 257, 264
Zsp2I ATGCAT 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.