Rh6BG094300

4,5-DOPA dioxygenase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
14877411 .. 14879150
1740 bp
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UTR
Exon/CDS
Intron
Rh6BG094300.1

Sequence Viewer

Length: 237 bp
ATGAGTAAACAATCAAAAATTCATGGATTTTTCAAAAGGAAGAATGCCCAATCTGATGCTAGTACTTCAGTGCCTCCACCATTGCCCAACTCCGGTACTGAAGCATCAACACCTGCTCCCGAAAATCCTCATCCTCTCAAAGACGGGAGCTATCACTTCGATATGGGGAAGGCGCTGGCGCCGTTGAGGGAGGAGGGTGTTCTTATTGTGGGGTCGGGAGCGCGACGCATAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

78

Amino Acids

8.32

Weight (kDa)

9.6

Isoelectric Point (pI)

61.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 121
Acc36I ACCTGC 1 cut(s) 121
AccB1I GGYRCC 1 cut(s) 178
AccII CGCG 1 cut(s) 223
AcsI RAATTY 1 cut(s) 18
AcuI CTGAAG 2 cut(s) 51, 120
AcyI GRCGYC 1 cut(s) 179
AfaI GTAC 2 cut(s) 64, 97
AfiI CCNNNNNNNGG 1 cut(s) 92
AgsI TTSAA 1 cut(s) 34
AluBI AGCT 1 cut(s) 150
AluI AGCT 1 cut(s) 150
ApoI RAATTY 1 cut(s) 18
AspLEI GCGC 3 cut(s) 175, 181, 223
BanI GGYRCC 1 cut(s) 178
BceAI ACGGC 1 cut(s) 166
BfaI CTAG 1 cut(s) 60
BfoI RGCGCY 2 cut(s) 176, 182
BfuAI ACCTGC 1 cut(s) 121
BmcAI AGTACT 1 cut(s) 64
BmiI GGNNCC 1 cut(s) 180
BmsI GCATC 2 cut(s) 46, 113
BsaHI GRCGYC 1 cut(s) 179
BsaWI WCCGGW 1 cut(s) 92
BsaXI ACNNNNNCTCC 2 cut(s) 100, 130
Bsc4I CCNNNNNNNGG 1 cut(s) 92
Bse3DI GCAATG 1 cut(s) 80
BseGI GGATG 1 cut(s) 130
BseLI CCNNNNNNNGG 1 cut(s) 92
BseMI GCAATG 1 cut(s) 80
BseRI GAGGAG 1 cut(s) 206
Bsh1236I CGCG 1 cut(s) 223
BshNI GGYRCC 1 cut(s) 178
BsiSI CCGG 1 cut(s) 93
BslI CCNNNNNNNGG 1 cut(s) 92
BsmI GAATGC 1 cut(s) 49
BspFNI CGCG 1 cut(s) 223
BspLI GGNNCC 1 cut(s) 180
BspMI ACCTGC 1 cut(s) 121
BspT107I GGYRCC 1 cut(s) 178
BsrDI GCAATG 1 cut(s) 80
BssNI GRCGYC 1 cut(s) 179
BstACI GRCGYC 1 cut(s) 179
BstC8I GCNNGC 1 cut(s) 177
BstF5I GGATG 1 cut(s) 130
BstFNI CGCG 1 cut(s) 223
BstH2I RGCGCY 2 cut(s) 176, 182
BstHHI GCGC 3 cut(s) 175, 181, 223
BstUI CGCG 1 cut(s) 223
BtsCI GGATG 1 cut(s) 130
BtsIMutI CAGTG 1 cut(s) 75
BveI ACCTGC 1 cut(s) 121
Cac8I GCNNGC 1 cut(s) 177
CfoI GCGC 3 cut(s) 175, 181, 223
Csp6I GTAC 2 cut(s) 63, 96
CviAII CATG 1 cut(s) 23
CviJI RGCY 1 cut(s) 150
CviKI_1 RGCY 1 cut(s) 150
CviQI GTAC 2 cut(s) 63, 96
DinI GGCGCC 1 cut(s) 180
Eco57I CTGAAG 2 cut(s) 51, 120
EgeI GGCGCC 1 cut(s) 180
EheI GGCGCC 1 cut(s) 180
FaeI CATG 1 cut(s) 26
FaiI YATR 3 cut(s) 24, 164, 230
FatI CATG 1 cut(s) 22
FokI GGATG 1 cut(s) 117
FspBI CTAG 1 cut(s) 60
GlaI GCGC 3 cut(s) 174, 180, 222
HaeII RGCGCY 2 cut(s) 176, 182
HapII CCGG 1 cut(s) 93
HhaI GCGC 3 cut(s) 175, 181, 223
Hin1I GRCGYC 1 cut(s) 179
Hin1II CATG 1 cut(s) 26
Hin6I GCGC 3 cut(s) 173, 179, 221
HinP1I GCGC 3 cut(s) 173, 179, 221
HpaII CCGG 1 cut(s) 93
Hpy166II GTNNAC 1 cut(s) 8
Hpy188I TCNGA 1 cut(s) 55
Hpy188III TCNNGA 2 cut(s) 119, 216
Hpy8I GTNNAC 1 cut(s) 8
Hpy99I CGWCG 1 cut(s) 228
HpyAV CCTTC 1 cut(s) 163
Hsp92I GRCGYC 1 cut(s) 179
Hsp92II CATG 1 cut(s) 26
HspAI GCGC 3 cut(s) 173, 179, 221
KasI GGCGCC 1 cut(s) 178
LmnI GCTCC 3 cut(s) 121, 147, 218
LpnPI CCDG 3 cut(s) 106, 126, 161
LweI GCATC 2 cut(s) 46, 113
MaeI CTAG 1 cut(s) 60
MboII GAAGA 1 cut(s) 52
MluCI AATT 1 cut(s) 18
Mly113I GGCGCC 1 cut(s) 179
MnlI CCTC 6 cut(s) 84, 138, 144, 180, 184, 187
MspI CCGG 1 cut(s) 93
Mva1269I GAATGC 1 cut(s) 49
MvnI CGCG 1 cut(s) 223
NarI GGCGCC 1 cut(s) 179
NlaIII CATG 1 cut(s) 26
NlaIV GGNNCC 1 cut(s) 180
PaqCI CACCTGC 1 cut(s) 121
PctI GAATGC 1 cut(s) 49
PluTI GGCGCC 1 cut(s) 182
PspN4I GGNNCC 1 cut(s) 180
RsaI GTAC 2 cut(s) 64, 97
RsaNI GTAC 2 cut(s) 63, 96
ScaI AGTACT 1 cut(s) 64
SetI ASST 2 cut(s) 115, 152
SfaNI GCATC 2 cut(s) 46, 113
SfoI GGCGCC 1 cut(s) 180
SgeI CNNG 8 cut(s) 35, 72, 105, 125, 131, 157, 188, 228
Sse9I AATT 1 cut(s) 18
SspDI GGCGCC 1 cut(s) 178
SspMI CTAG 1 cut(s) 60
TaqI TCGA 1 cut(s) 159
TasI AATT 1 cut(s) 18
TatI WGTACW 1 cut(s) 62
TscAI CASTG 1 cut(s) 75
TspDTI ATGAA 1 cut(s) 11
TspRI CASTG 1 cut(s) 75
XapI RAATTY 1 cut(s) 18
XspI CTAG 1 cut(s) 60
ZrmI AGTACT 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.