Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001464

Physical Location & Seq

Genomic Coordinates Reverse (-)

38458587 .. 38460923

Gene Structure 2337 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24799

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGGCTGCAATTTTTCTTTTTCTTCTTCTTGTTCTTCTTCTTCAAATTGCAGCTGCACAACAAGGGAATATCAGCCTAGGTGCTTCTCTATATCCCAATAACAACTCATATTGGTTGTCGAATTCGGGTCATTTTGCTTTTGGCTTCTACAGGCAAGGAAATGACCTTGCTGTAGGCATCTGGTTCGAGAAAACCAATCCGAAAACAATCATCTGGACTGCAAATGGTGATGCTGTTAAACAAGAGCCACTTCCTAATGATGTTCAATTGACTGTGAGGGATAGTGGAGTTGAACTCAATTCAACCAGCAAGAATGTCATCCTTATACCAATTCCAAATTCTTCCCAGCCTGCTGTCAGGGCCTCCATGTTTGATTCAGGTAACTTTGTCCTCTACAATTCTGATTCAAACATCATTTGGCAGACTTTTGATGTTCCAACAGATACCATTGTATCCGGGCAGCGTCTGTTGGCTGGAACAAAGCTCATCTCCTCCGTCTCGAACACGAATCACTCAAGTGGAAGGTTTCAACTGATCATGCAGACAGATGGCAACCTGGTTCAGTATCCAATTGGTCCATTGACAGTGAGTGCTGATCAATATGCCTATTGGAACACTGAGACAGCCACAGCAGGGAACAATGTGTCCCTCCATCTTGATCAAAATGAGGGGCTCTATCTTCTTAATTCCACCGGTTTCAAGATAAAAAGTTTATTTTCTCTTCAGAAAGGCCTTTCTATGTATCGTAGCTATCGTCTGACGATTGATTGTGATGGAATACTCCGGTTGTACTCCTATAGTTTGGGTCAGAATGATTCCTGGTCAATTGAGTGGTCACCACCAAATATTGATAGGTGTGCTCCTCCTGGACTCTGTGGCCTAAATTCTTATTGTGTTATTGGGAAACCGGAACCTTCTTGTGTATGTCTCCCTGGTTTCGTTTTCATCGACGAGGGCCAAAGATATTTAGGCTGCAAGAGAAACTTGAGTACAGCTGGTTGCAAAGGTGAGAATGAAACTTCATATTCTATTGTTGATGTCGATAACATAAATTGGGAAAGCACTCCATACTCTATTCTATCATTGGATAAGACTGCTTGTAAAGAGGACTGTTTGATGGATTGTGACTGTGAAGCTGCGATATTTAGGGACCAGCAGTGCAGAAAACAAAAGCTCCCTCTAAGATTTGGAAGAACTCGCCCAACCAACATGGCGGTGACAACCTTTGTCAAAAAGGAAACTACTGATGAGAGTTCCATTACAAAAAGGGGGAGCAAGGGAAGAAAAAATGTCGACAGAGTCATATTTATTAGCATCATTGCAACTTTAACTTTTTCACTTATTATTATGGCAATTACTGGTGTTGTTATATATAGATATCGTGTTTGGGATTACCGAAAGGTTACAAATCCAGCTGGTGAAGAGTTAATTGAAGGTGTTACACTGCGGTCATATACATACTGTGAACTTGAAAAGGCAACCAAAGGATTCACCAATCAAGTGGGAAAAGGAGCTTTTGGGACAGTTTTTAAAGGGGTGATTGGTGGGAGAGAAGTGGCAATCAAGCAACTAGAGACAGTGGTGGATGAAGGAGAGCGAGAGTTTCGTAATGAGATGAATGCAATTGGGAGAACTCATCACAAGAATCTAGTGAAATTGCTTGGCTACTGTCATGATGGAACAAATAGGCTTCTGGTTTATGAGTACATGACCAACGGCTCACTTGCGAAATACTTTTTCAATTCTTATGGTGGAAGGCCAACTTGGGAGGAAAGAGTCAGTGTAGCCCTCAATGTAGCTCAAGGTATACTATATCTACATGAAGAGTGTGAGACACAAATCATTCATTGTGACATCAAACCAGAAAATATACTGATGACTGAGCAGAAATGTGCAAAGCTTGCTGATTTTGGATTAGCCAAGCTGTTGAAAGCCGACCAATCAAGGACATCTACTGGCTTCAGAGGAACCAGGGGTTACGTTGCACCTGAGTGGCACAGGAACATGTCAATAACAGTGAAAGTGGACGTGTACAGCTTCGGGATTGTATTGTTGGAGATCATATGCTGTCAGAGAGGTTCGACCATGGACATACCTGAGGATCTATTAACTCTTGAGAATTGGATGTACCATTGTTTGGAGGCCAATGAACTGGATAAGCTAGTGAAGGATGATGATGAGATTGACACAAGTAAACTACGGGAGATGGTTAAGCTTGGTCTTTGCTGCATCCAGGAGGAGCCATCATTGCGCCCTTCGATGAAGAAGGTGGTACTAATGCTGGAAGGGATTCTGGAGATACCATCACCTCCAAATTCTTTCAGTTCCAGACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

778

Amino Acids

87.05

Weight (kDa)

6.09

Isoelectric Point (pI)

30.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	69 - 158	2.2e-10	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	498 - 759	4.3e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	499 - 758	4.4e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001464)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g14250
malus_domestica	MD05G1020600.v1.1
prunus_persica	Prupe.8G024600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0276401 RchiOBHm_Chr6g0276411 RchiOBHm_Chr6g0276421 RchiOBHm_Chr6g0276441 RchiOBHm_Chr6g0276461 RchiOBHm_Chr6g0276511 RchiOBHm_Chr6g0276531 RchiOBHm_Chr6g0287831
rosa_laevigata	RLG00000013394 RLG00000013396
rosa_multiflora	Rmu_co8365989.1_g000001 Rmu_sc0003877.1_g000005 Rmu_sc0004126.1_g000003 Rmu_sc0004126.1_g000009 Rmu_sc0004126.1_g000010 Rmu_sc0004126.1_g000014 Rmu_sc0004126.1_g000016 Rmu_sc0004248.1_g000005 Rmu_sc0004248.1_g000009 Rmu_sc0004248.1_g000029 Rmu_sc0007724.1_g000004 Rmu_ssc0000059.1_g000026
rosa_roxburghii	Rroxscaffold_7G00180750 Rroxscaffold_7G00181160 Rroxscaffold_7G00192200 Rroxscaffold_7G00192230 Rroxscaffold_7G00192240
rosa_rugosa	Rorug06G0101300 Rorug06G0101500 Rorug06G0101600
rosa_samantha	Rh6AG212100 Rh6AG212200 Rh6AG301900 Rh6BG216400 Rh6BG216800 Rh6BG217000 Rh6BG217200 Rh6BG308000 Rh6CG218600 Rh6CG219000 Rh6CG219100 Rh6DG208400 Rh6DG208500 Rh6DG209100 Rh6DG300600
rosa_wichuraiana	Rw6G018510 Rw6G018530 Rw6G018540 Rw6G026080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2137
AccI	GTMKAC	2 cut(s)	1293, 1807
AciI	CCGC	2 cut(s)	1214, 1447
AclWI	GGATC	1 cut(s)	2109
AcsI	RAATTY	4 cut(s)	121, 337, 883, 2314
AcuI	CTGAAG	2 cut(s)	707, 1945
AfaI	GTAC	6 cut(s)	791, 991, 1706, 2033, 2129, 2274
AfiI	CCNNNNNNNGG	2 cut(s)	633, 2137
AflIII	ACRYGT	2 cut(s)	2004, 2028
AgeI	ACCGGT	1 cut(s)	692
AjiI	CACGTC	1 cut(s)	2029
AjnI	CCWGG	6 cut(s)	555, 818, 865, 931, 1970, 2232
AjuI	GAANNNNNNNTTGG	4 cut(s)	322, 354, 1747, 1779
AleI	CACNNNNGTG	2 cut(s)	516, 1990
AloI	GAACNNNNNNTCC	2 cut(s)	629, 661
Alw21I	GWGCWC	1 cut(s)	862
Alw26I	GTCTC	5 cut(s)	502, 614, 932, 1568, 1826
AlwI	GGATC	1 cut(s)	2109
AlwNI	CAGNNNCTG	1 cut(s)	466
AoxI	GGCC	6 cut(s)	360, 730, 877, 955, 1757, 2142
ApeKI	GCWGC	7 cut(s)	5, 50, 53, 460, 972, 1136, 2226
ApoI	RAATTY	4 cut(s)	121, 337, 883, 2314
AsiGI	ACCGGT	1 cut(s)	692
Asp700I	GAANNNNTTC	1 cut(s)	2289
AspA2I	CCTAGG	1 cut(s)	76
AspLEI	GCGC	1 cut(s)	2253
AspS9I	GGNCC	4 cut(s)	360, 575, 955, 1150
AsuC2I	CCSGG	1 cut(s)	457
AsuHPI	GGTGA	8 cut(s)	239, 828, 1019, 1228, 1430, 1483, 1549, 2298
AvaII	GGWCC	2 cut(s)	575, 1150
AvrII	CCTAGG	1 cut(s)	76
AxyI	CCTNAGG	1 cut(s)	2097
BaeI	ACNNNNGTAYC	4 cut(s)	435, 435, 468, 468
BanII	GRGCYC	1 cut(s)	675
Bbv12I	GWGCWC	1 cut(s)	862
BbvI	GCAGC	6 cut(s)	40, 62, 472, 959, 1123, 2213
BccI	CCATC	8 cut(s)	542, 660, 767, 1111, 1670, 2200, 2251, 2311
BceAI	ACGGC	1 cut(s)	1732
BcgI	CGANNNNNNTGC	2 cut(s)	166, 200
BciT130I	CCWGG	6 cut(s)	557, 820, 867, 933, 1972, 2234
BciVI	GTATCC	2 cut(s)	463, 576
BclI	TGATCA	3 cut(s)	534, 595, 658
BcnI	CCSGG	1 cut(s)	457
BcoDI	GTCTC	5 cut(s)	502, 614, 932, 1568, 1826
BfaI	CTAG	4 cut(s)	77, 1571, 1649, 2162
BfmI	CTRYAG	3 cut(s)	148, 171, 796
BfuI	GTATCC	2 cut(s)	463, 576
BisI	GCNGC	7 cut(s)	6, 51, 54, 461, 973, 1137, 2227
BlnI	CCTAGG	1 cut(s)	76
BlsI	GCNGC	7 cut(s)	7, 52, 55, 462, 974, 1138, 2228
Bme1390I	CCNGG	7 cut(s)	457, 557, 820, 867, 933, 1972, 2234
Bme18I	GGWCC	2 cut(s)	575, 1150
BmgBI	CACGTC	1 cut(s)	2029
BmgT120I	GGNCC	4 cut(s)	360, 575, 955, 1150
BmiI	GGNNCC	4 cut(s)	912, 1151, 1969, 2241
BmrFI	CCNGG	7 cut(s)	457, 557, 820, 867, 933, 1972, 2234
BmsI	GCATC	4 cut(s)	186, 220, 1323, 2238
BplI	GAGNNNNNCTC	2 cut(s)	279, 311
BpmI	CTGGAG	1 cut(s)	2315
BpuEI	CTTGAG	4 cut(s)	499, 1006, 1785, 2135
BpuMI	CCSGG	1 cut(s)	457
BsaJI	CCNNGG	4 cut(s)	76, 931, 1971, 2085
BsaWI	WCCGGW	3 cut(s)	692, 783, 907
BsaXI	ACNNNNNCTCC	2 cut(s)	1158, 1188
Bsc4I	CCNNNNNNNGG	2 cut(s)	633, 2137
Bse118I	RCCGGY	1 cut(s)	692
Bse1I	ACTGG	3 cut(s)	1363, 1960, 2157
Bse21I	CCTNAGG	1 cut(s)	2097
Bse3DI	GCAATG	2 cut(s)	1317, 2246
BseBI	CCWGG	6 cut(s)	557, 820, 867, 933, 1972, 2234
BseDI	CCNNGG	4 cut(s)	76, 931, 1971, 2085
BseGI	GGATG	5 cut(s)	318, 1591, 2130, 2176, 2229
BseLI	CCNNNNNNNGG	2 cut(s)	633, 2137
BseMI	GCAATG	2 cut(s)	1317, 2246
BseMII	CTCAG	4 cut(s)	609, 1872, 1980, 2088
BseNI	ACTGG	3 cut(s)	1363, 1960, 2157
BseRI	GAGGAG	3 cut(s)	481, 852, 2252
BseXI	GCAGC	6 cut(s)	40, 62, 472, 959, 1123, 2213
BseYI	CCCAGC	1 cut(s)	345
BsgI	GTGCAG	2 cut(s)	39, 1180
BshFI	GGCC	6 cut(s)	362, 732, 879, 957, 1759, 2144
BshTI	ACCGGT	1 cut(s)	692
BsiHKAI	GWGCWC	1 cut(s)	862
BsiSI	CCGG	4 cut(s)	456, 693, 784, 908
BslFI	GGGAC	3 cut(s)	631, 1163, 1534
BslI	CCNNNNNNNGG	2 cut(s)	633, 2137
BsmAI	GTCTC	5 cut(s)	502, 614, 932, 1568, 1826
BsmBI	CGTCTC	1 cut(s)	502
BsmFI	GGGAC	3 cut(s)	631, 1163, 1534
BsmI	GAATGC	1 cut(s)	1624
BsnI	GGCC	6 cut(s)	362, 732, 879, 957, 1759, 2144
Bsp1286I	GDGCHC	2 cut(s)	675, 862
Bsp1407I	TGTACA	1 cut(s)	2031
Bsp143I	GATC	5 cut(s)	534, 595, 658, 2058, 2101
Bsp19I	CCATGG	1 cut(s)	2085
BspACI	CCGC	2 cut(s)	1214, 1447
BspANI	GGCC	6 cut(s)	362, 732, 879, 957, 1759, 2144
BspCNI	CTCAG	4 cut(s)	610, 1873, 1981, 2089
BspHI	TCATGA	1 cut(s)	1672
BspLI	GGNNCC	4 cut(s)	912, 1151, 1969, 2241
BspPI	GGATC	1 cut(s)	2109
BsrDI	GCAATG	2 cut(s)	1317, 2246
BsrFI	RCCGGY	1 cut(s)	692
BsrGI	TGTACA	1 cut(s)	2031
BsrI	ACTGG	3 cut(s)	1363, 1960, 2157
BssAI	RCCGGY	1 cut(s)	692
BssECI	CCNNGG	4 cut(s)	76, 931, 1971, 2085
BssMI	GATC	5 cut(s)	534, 595, 658, 2058, 2101
BssNAI	GTATAC	1 cut(s)	1808
BssT1I	CCWWGG	2 cut(s)	76, 2085
Bst1107I	GTATAC	1 cut(s)	1808
Bst2UI	CCWGG	6 cut(s)	557, 820, 867, 933, 1972, 2234
Bst4CI	ACNGT	9 cut(s)	274, 586, 1112, 1130, 1463, 1525, 1579, 1670, 2017
Bst6I	CTCTTC	3 cut(s)	726, 1416, 1818
BstAPI	GCANNNNNTGC	1 cut(s)	1901
BstAUI	TGTACA	1 cut(s)	2031
BstC8I	GCNNGC	2 cut(s)	351, 1902
BstDEI	CTNAG	5 cut(s)	618, 1181, 1881, 1989, 2097
BstDSI	CCRYGG	1 cut(s)	2085
BstEII	GGTNACC	1 cut(s)	834
BstF5I	GGATG	5 cut(s)	318, 1591, 2130, 2176, 2229
BstHHI	GCGC	1 cut(s)	2253
BstKTI	GATC	5 cut(s)	537, 598, 661, 2061, 2104
BstMAI	GTCTC	5 cut(s)	502, 614, 932, 1568, 1826
BstMBI	GATC	5 cut(s)	534, 595, 658, 2058, 2101
BstMWI	GCNNNNNNNGC	3 cut(s)	359, 1901, 2248
BstNI	CCWGG	6 cut(s)	557, 820, 867, 933, 1972, 2234
BstNSI	RCATGY	1 cut(s)	2008
BstPI	GGTNACC	1 cut(s)	834
BstSCI	CCNGG	7 cut(s)	455, 555, 818, 865, 931, 1970, 2232
BstSFI	CTRYAG	3 cut(s)	148, 171, 796
BstV1I	GCAGC	6 cut(s)	40, 62, 472, 959, 1123, 2213
BstX2I	RGATCY	1 cut(s)	2101
BstXI	CCANNNNNNTGG	2 cut(s)	1501, 2152
BstYI	RGATCY	1 cut(s)	2101
BstZ17I	GTATAC	1 cut(s)	1808
Bsu36I	CCTNAGG	1 cut(s)	2097
BsuI	GTATCC	2 cut(s)	463, 576
BsuRI	GGCC	6 cut(s)	362, 732, 879, 957, 1759, 2144
BtgI	CCRYGG	1 cut(s)	2085
BtrI	CACGTC	1 cut(s)	2029
BtsCI	GGATG	5 cut(s)	318, 1591, 2130, 2176, 2229
BtsI	GCAGTG	2 cut(s)	1163, 1442
BtsIMutI	CAGTG	7 cut(s)	591, 615, 1163, 1442, 1584, 1786, 2022
Cac8I	GCNNGC	2 cut(s)	351, 1902
CaiI	CAGNNNCTG	1 cut(s)	466
CciI	TCATGA	1 cut(s)	1672
CfoI	GCGC	1 cut(s)	2253
Cfr10I	RCCGGY	1 cut(s)	692
Cfr13I	GGNCC	4 cut(s)	360, 575, 955, 1150
CseI	GACGC	1 cut(s)	452
CsiI	ACCWGGT	1 cut(s)	555
Csp6I	GTAC	6 cut(s)	790, 990, 1705, 2032, 2128, 2273
CspAI	ACCGGT	1 cut(s)	692
CviAII	CATG	8 cut(s)	367, 538, 1210, 1673, 1708, 1820, 2005, 2086
CviQI	GTAC	6 cut(s)	790, 990, 1705, 2032, 2128, 2273
DdeI	CTNAG	5 cut(s)	618, 1181, 1881, 1989, 2097
DpnI	GATC	5 cut(s)	536, 597, 660, 2060, 2103
DpnII	GATC	5 cut(s)	534, 595, 658, 2058, 2101
DraI	TTTAAA	1 cut(s)	1531
Eam1104I	CTCTTC	3 cut(s)	726, 1416, 1818
EarI	CTCTTC	3 cut(s)	726, 1416, 1818
Eco130I	CCWWGG	2 cut(s)	76, 2085
Eco147I	AGGCCT	1 cut(s)	732
Eco24I	GRGCYC	1 cut(s)	675
Eco32I	GATATC	1 cut(s)	1379
Eco47I	GGWCC	2 cut(s)	575, 1150
Eco57I	CTGAAG	2 cut(s)	707, 1945
Eco81I	CCTNAGG	1 cut(s)	2097
Eco91I	GGTNACC	1 cut(s)	834
EcoO109I	RGGNCCY	1 cut(s)	360
EcoO65I	GGTNACC	1 cut(s)	834
EcoRI	GAATTC	1 cut(s)	121
EcoRII	CCWGG	6 cut(s)	555, 818, 865, 931, 1970, 2232
EcoRV	GATATC	1 cut(s)	1379
EcoT14I	CCWWGG	2 cut(s)	76, 2085
EcoT38I	GRGCYC	1 cut(s)	675
ErhI	CCWWGG	2 cut(s)	76, 2085
Esp3I	CGTCTC	1 cut(s)	502
FaeI	CATG	8 cut(s)	370, 541, 1213, 1676, 1711, 1823, 2008, 2089
FalI	AAGNNNNNCTT	6 cut(s)	234, 266, 968, 1000, 1747, 1779
FaqI	GGGAC	3 cut(s)	631, 1163, 1534
FatI	CATG	8 cut(s)	366, 537, 1209, 1672, 1707, 1819, 2004, 2085
FauNDI	CATATG	1 cut(s)	2063
FbaI	TGATCA	3 cut(s)	534, 595, 658
FblI	GTMKAC	2 cut(s)	1293, 1807
Fnu4HI	GCNGC	7 cut(s)	6, 51, 54, 461, 973, 1137, 2227
FokI	GGATG	5 cut(s)	305, 1598, 2137, 2183, 2216
FriOI	GRGCYC	1 cut(s)	675
Fsp4HI	GCNGC	7 cut(s)	6, 51, 54, 461, 973, 1137, 2227
FspBI	CTAG	4 cut(s)	77, 1571, 1649, 2162
GlaI	GCGC	1 cut(s)	2252
GluI	GCNGC	7 cut(s)	6, 51, 54, 461, 973, 1137, 2227
GsaI	CCCAGC	1 cut(s)	349
GsuI	CTGGAG	1 cut(s)	2315
HaeIII	GGCC	6 cut(s)	362, 732, 879, 957, 1759, 2144
HapII	CCGG	4 cut(s)	456, 693, 784, 908
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	1 cut(s)	2253
Hin1II	CATG	8 cut(s)	370, 541, 1213, 1676, 1711, 1823, 2008, 2089
Hin6I	GCGC	1 cut(s)	2251
HinP1I	GCGC	1 cut(s)	2251
HincII	GTYRAC	1 cut(s)	1294
HindII	GTYRAC	1 cut(s)	1294
HindIII	AAGCTT	2 cut(s)	1898, 2213
HpaII	CCGG	4 cut(s)	456, 693, 784, 908
HphI	GGTGA	8 cut(s)	239, 828, 1019, 1228, 1430, 1483, 1549, 2298
Hpy166II	GTNNAC	6 cut(s)	1294, 1466, 1808, 2026, 2032, 2195
Hpy188I	TCNGA	7 cut(s)	201, 403, 726, 759, 810, 1964, 2073
Hpy8I	GTNNAC	6 cut(s)	1294, 1466, 1808, 2026, 2032, 2195
Hpy99I	CGWCG	1 cut(s)	953
HpyAV	CCTTC	9 cut(s)	516, 924, 1427, 1583, 1749, 2161, 2260, 2265, 2279
HpyCH4III	ACNGT	9 cut(s)	274, 586, 1112, 1130, 1463, 1525, 1579, 1670, 2017
HpyCH4IV	ACGT	2 cut(s)	1980, 2028
HpyF10VI	GCNNNNNNNGC	3 cut(s)	359, 1901, 2248
HpyF3I	CTNAG	5 cut(s)	618, 1181, 1881, 1989, 2097
HpySE526I	ACGT	2 cut(s)	1980, 2028
Hsp92II	CATG	8 cut(s)	370, 541, 1213, 1676, 1711, 1823, 2008, 2089
HspAI	GCGC	1 cut(s)	2251
Ksp22I	TGATCA	3 cut(s)	534, 595, 658
Kzo9I	GATC	5 cut(s)	534, 595, 658, 2058, 2101
LmnI	GCTCC	5 cut(s)	865, 1179, 1272, 1511, 2239
Lsp1109I	GCAGC	6 cut(s)	40, 62, 472, 959, 1123, 2213
LweI	GCATC	4 cut(s)	186, 220, 1323, 2238
MabI	ACCWGGT	1 cut(s)	555
MaeI	CTAG	4 cut(s)	77, 1571, 1649, 2162
MaeII	ACGT	2 cut(s)	1980, 2028
MaeIII	GTNAC	8 cut(s)	380, 834, 1124, 1216, 1402, 1438, 1850, 1976
MalI	GATC	5 cut(s)	536, 597, 660, 2060, 2103
MboI	GATC	5 cut(s)	534, 595, 658, 2058, 2101
MfeI	CAATTG	4 cut(s)	266, 570, 825, 1623
MflI	RGATCY	1 cut(s)	2101
MhlI	GDGCHC	2 cut(s)	675, 862
MlyI	GAGTC	3 cut(s)	864, 1308, 1785
MmeI	TCCRAC	2 cut(s)	461, 2034
MroXI	GAANNNNTTC	1 cut(s)	2289
MseI	TTAA	7 cut(s)	237, 684, 1328, 1427, 1530, 2108, 2211
MslI	CAYNNNNRTG	3 cut(s)	516, 1214, 1990
MspA1I	CMGCKG	3 cut(s)	53, 995, 1415
MspI	CCGG	4 cut(s)	456, 693, 784, 908
MspR9I	CCNGG	7 cut(s)	457, 557, 820, 867, 933, 1972, 2234
MunI	CAATTG	4 cut(s)	266, 570, 825, 1623
Mva1269I	GAATGC	1 cut(s)	1624
MvaI	CCWGG	6 cut(s)	557, 820, 867, 933, 1972, 2234
MwoI	GCNNNNNNNGC	3 cut(s)	359, 1901, 2248
NciI	CCSGG	1 cut(s)	457
NcoI	CCATGG	1 cut(s)	2085
NdeI	CATATG	1 cut(s)	2063
NdeII	GATC	5 cut(s)	534, 595, 658, 2058, 2101
NlaIII	CATG	8 cut(s)	370, 541, 1213, 1676, 1711, 1823, 2008, 2089
NlaIV	GGNNCC	4 cut(s)	912, 1151, 1969, 2241
NmuCI	GTSAC	4 cut(s)	834, 1124, 1216, 1850
NspI	RCATGY	1 cut(s)	2008
OliI	CACNNNNGTG	2 cut(s)	516, 1990
PagI	TCATGA	1 cut(s)	1672
PceI	AGGCCT	1 cut(s)	732
PciI	ACATGT	1 cut(s)	2004
PcsI	WCGNNNNNNNCGW	2 cut(s)	751, 945
PctI	GAATGC	1 cut(s)	1624
PdmI	GAANNNNTTC	1 cut(s)	2289
PfeI	GAWTC	7 cut(s)	374, 404, 508, 815, 1488, 1645, 2290
PflFI	GACNNNGTC	1 cut(s)	1298
PflMI	CCANNNNNTGG	1 cut(s)	2137
PfoI	TCCNGGA	2 cut(s)	865, 2232
PinAI	ACCGGT	1 cut(s)	692
PkrI	GCNGC	7 cut(s)	7, 52, 55, 462, 974, 1138, 2228
PleI	GAGTC	3 cut(s)	864, 1307, 1784
PpsI	GAGTC	3 cut(s)	864, 1307, 1784
PscI	ACATGT	1 cut(s)	2004
Psp6I	CCWGG	6 cut(s)	555, 818, 865, 931, 1970, 2232
PspEI	GGTNACC	1 cut(s)	834
PspFI	CCCAGC	1 cut(s)	345
PspGI	CCWGG	6 cut(s)	555, 818, 865, 931, 1970, 2232
PspN4I	GGNNCC	4 cut(s)	912, 1151, 1969, 2241
PspPI	GGNCC	4 cut(s)	360, 575, 955, 1150
PstNI	CAGNNNCTG	1 cut(s)	466
PsuI	RGATCY	1 cut(s)	2101
PsyI	GACNNNGTC	1 cut(s)	1298
PvuII	CAGCTG	3 cut(s)	53, 995, 1415
RsaI	GTAC	6 cut(s)	791, 991, 1706, 2033, 2129, 2274
RsaNI	GTAC	6 cut(s)	790, 990, 1705, 2032, 2128, 2273
RseI	CAYNNNNRTG	3 cut(s)	516, 1214, 1990
SalI	GTCGAC	1 cut(s)	1292
SaqAI	TTAA	7 cut(s)	237, 684, 1328, 1427, 1530, 2108, 2211
SatI	GCNGC	7 cut(s)	6, 51, 54, 461, 973, 1137, 2227
Sau3AI	GATC	5 cut(s)	534, 595, 658, 2058, 2101
Sau96I	GGNCC	4 cut(s)	360, 575, 955, 1150
SchI	GAGTC	3 cut(s)	864, 1308, 1785
ScrFI	CCNGG	7 cut(s)	457, 557, 820, 867, 933, 1972, 2234
SduI	GDGCHC	2 cut(s)	675, 862
SexAI	ACCWGGT	1 cut(s)	555
SfaNI	GCATC	4 cut(s)	186, 220, 1323, 2238
SfcI	CTRYAG	3 cut(s)	148, 171, 796
SinI	GGWCC	2 cut(s)	575, 1150
SmiMI	CAYNNNNRTG	3 cut(s)	516, 1214, 1990
SmlI	CTYRAG	4 cut(s)	514, 985, 1800, 2114
SmoI	CTYRAG	4 cut(s)	514, 985, 1800, 2114
SseBI	AGGCCT	1 cut(s)	732
SsiI	CCGC	2 cut(s)	1214, 1447
SspI	AATATT	1 cut(s)	847
SspMI	CTAG	4 cut(s)	77, 1571, 1649, 2162
StuI	AGGCCT	1 cut(s)	732
StyD4I	CCNGG	7 cut(s)	455, 555, 818, 865, 931, 1970, 2232
StyI	CCWWGG	2 cut(s)	76, 2085
TaaI	ACNGT	9 cut(s)	274, 586, 1112, 1130, 1463, 1525, 1579, 1670, 2017
TaiI	ACGT	2 cut(s)	1983, 2031
TaqI	TCGA	8 cut(s)	119, 186, 500, 948, 1041, 1293, 2081, 2258
TatI	WGTACW	4 cut(s)	789, 989, 1704, 2031
TfiI	GAWTC	7 cut(s)	374, 404, 508, 815, 1488, 1645, 2290
Tru1I	TTAA	7 cut(s)	237, 684, 1328, 1427, 1530, 2108, 2211
Tru9I	TTAA	7 cut(s)	237, 684, 1328, 1427, 1530, 2108, 2211
TscAI	CASTG	7 cut(s)	591, 622, 1163, 1449, 1584, 1786, 2022
TseFI	GTSAC	4 cut(s)	834, 1124, 1216, 1850
TseI	GCWGC	7 cut(s)	5, 50, 53, 460, 972, 1136, 2226
Tsp45I	GTSAC	4 cut(s)	834, 1124, 1216, 1850
TspDTI	ATGAA	9 cut(s)	934, 1011, 1029, 1602, 1631, 1835, 1836, 2163, 2276
TspGWI	ACGGA	1 cut(s)	484
TspRI	CASTG	7 cut(s)	591, 622, 1163, 1449, 1584, 1786, 2022
Tth111I	GACNNNGTC	1 cut(s)	1298
Van91I	CCANNNNNTGG	1 cut(s)	2137
VpaK11BI	GGWCC	2 cut(s)	575, 1150
XapI	RAATTY	4 cut(s)	121, 337, 883, 2314
XceI	RCATGY	1 cut(s)	2008
XmaJI	CCTAGG	1 cut(s)	76
XmiI	GTMKAC	2 cut(s)	1293, 1807
XmnI	GAANNNNTTC	1 cut(s)	2289
XspI	CTAG	4 cut(s)	77, 1571, 1649, 2162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.