Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001464

Physical Location & Seq

Genomic Coordinates Forward (+)

49476794 .. 49479133

Gene Structure 2340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G026080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGAAAAACTCAAACATGGCTGCAATTTTTCTTTTACTTCTTCTTCTTCTTCAAGTTGCAGCTGCTCAACAAGGGAATATCAGCCTAGGTGCTTCTCTATATCCCAATAACAACTCATATTGGTTATCGAATTCAAGTCAGTTTGCCTTTGGCTTCTACAGGCAAGGAAATGACCTTGCTGTAGGCATCTGGTTCGAGAAAACCAATCCGAAAACAATCATCTGGACAGCAAATCGTGATGCTGTTAAACAAGAGCCACTTCCTAATGATGTTCAATTGACTGTGAGTGACAAAGGAGTGGAGCTCATTTCAACAAACAAGAATGCCTTCCTTATACCAATTTCAAATTCTTCGCAGCCTGCTGTCAGGGCCTCCATGCTTGATTCAGGTAACTTTGTCCTCTACAATTCTGATTCAAACATCATTTGGCAGACTTTCGATGTTCCAACAGATACCATTGTATCCGGGCAGCGTCTGTTGGCTGGAACAAAGCTCATCTCCTCCTTCTCAAACACGAATCATGCAAGTGGAAGGTTTCAAGTGATCATGCAGGGAGATGGCAACCTGGTTCAGTATCCAATTGGTCCATTTACATTGAGTTCTAATCAATATTCTTATTGGAACACTGGGACATTCACAGCTGGGAGCAATGTGTCCCTCAATCTTGATCAAAATGAGGGGCTCTATCTTCTTGACTCCACCGGTTTCAAGATAAAAAGTTTGTTTTCTCTTCAGAAAGACCTTTCTATGTATCGCAGCTATCGTCTGACGATTGATGCTGATGGAATACTCCGGTTGTACTCCTACAGTTTGGTTAAGAATGATTCCTGGTCAATTGATTGGTCACCAACTGATAGTAAGTGTGCTCCTATTGGCCTTTGTGGCCTAAATTCTTATTGTGTTCTTGTGGATCCGGAACCTTCCTGTGTATGTCTCCCTGGTTTCGTTTTCATCGACGAAGGCCAAAGATATTTAGGCTGCAAGAGGAACTTGAGTACAGTTGGTTGCAAAGGTGAGAATGAAACTTCATATTCTATTGTTGATGTGGATAACATAGATTGGGAAAACACTCCATACTCTATTCTATCATTGGATAAGACTGCTTGTAAAGAGGACTGTTTGATGGATTGTAATTGTGAAGTTGCGATATTTATGGACCAGCAGTGTAGAAAACAAAAGCTCCCTCTACGATTTGGAAGAACTCCCCAAAGCGATGTGGTGACAACCTTTGTCAAAAAGGGTACTACTGATGAGAGTTCAGGTACAAAAAGGGTGAGCAAGGGAAGAAAAAATATTAACACAATCATATTTATCAGCAGCACTGCAACTTTAACTTTTTCACTCGTTATTATGGCAATTACTGGTGTTGTTATATATAGATATCGTGTTTGGGATTACCGAAAGGTTACTAATTCAGCTGGTGAAGGGTTAATTGAAGGTGTTACGCTGCGGTCATATACATATTGTGAACTTGAAAAGGCAACCAAAGGCTTCACCAATCAAGTGGGAAAAGGAGCTTTTGGGACAGTTTTTAAAGGGGTGATTGGTGGGAGAGAAGTGGCAATCAAGCAACTAGAGACAGTGGTGGATGAAGGAGAGCGAGAGTTTTGTAATGAGATGAATGCAATTGGGAGAACTCATCACAAGAATCTAGTGAAATTGCTTGGCTACTGTCATGATGGAACAAATAGGCTTCTGGTTTATGAGTACATGACCAACGGCTCACTTGCGGATTTCTTTTTCAAATCTTATAGTGGAAGGCCAGCTTGGGAGGAAAGAGTCAGCACAGCCCTCAATGTAGCTCAAGGTATACTATATCTACATGAAGAGTGTGATACACAAATCATTCACTGTGACATCAAACCAGAAAATATACTGATGACCGAGCAGAAATGTGCAAAGCTTGCTGATTTCGGATTAGCCAAGCTGTTGAAAGCTGACCAATCCAGGACATATACTGGCTTCAGAGGAACCAGGGGTTATGTTGCCCCTGAGTGGCACAGGAACATGTCGATAACAGTGAAAGCAGACGTGTACAGCTTCGGGATTGTATTGTTGGAGATCATATGCTGTCAAAGAGGTTCGACTATGGACATACCTGAGGATCAATTAACTATTGAAAATTGGATGTACCATTGTTTGGAGGCCAATGAACTGGATAAGCTAGTGAAGGATGATGATGACATTGACATGAGTAAACTACGGGAGATGGTTAAGCTTGGTCTTTGCTGCATCCAGGAGGAGCCATCATTGCGCCCTTCGATGAAGAAGGTGGTACTAATGCTGGAAGATAGTCCAGAGATACCATCCCCTCCAAATTCTTTCAGTTCCAGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

779

Amino Acids

87.0

Weight (kDa)

5.62

Isoelectric Point (pI)

31.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	72 - 160	6.3e-13	D-mannose binding lectin
S_locus_glycop	PF00954	242 - 316	5.6e-07	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	499 - 760	6.7e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	500 - 759	5.3e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001464)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g14250
malus_domestica	MD05G1020600.v1.1
prunus_persica	Prupe.8G024600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0276401 RchiOBHm_Chr6g0276411 RchiOBHm_Chr6g0276421 RchiOBHm_Chr6g0276441 RchiOBHm_Chr6g0276461 RchiOBHm_Chr6g0276511 RchiOBHm_Chr6g0276531 RchiOBHm_Chr6g0287831
rosa_laevigata	RLG00000013394 RLG00000013396
rosa_multiflora	Rmu_co8365989.1_g000001 Rmu_sc0003877.1_g000005 Rmu_sc0004126.1_g000003 Rmu_sc0004126.1_g000009 Rmu_sc0004126.1_g000010 Rmu_sc0004126.1_g000014 Rmu_sc0004126.1_g000016 Rmu_sc0004248.1_g000005 Rmu_sc0004248.1_g000009 Rmu_sc0004248.1_g000029 Rmu_sc0007724.1_g000004 Rmu_ssc0000059.1_g000026
rosa_roxburghii	Rroxscaffold_7G00180750 Rroxscaffold_7G00181160 Rroxscaffold_7G00192200 Rroxscaffold_7G00192230 Rroxscaffold_7G00192240
rosa_rugosa	Rorug06G0101300 Rorug06G0101500 Rorug06G0101600
rosa_samantha	Rh6AG212100 Rh6AG212200 Rh6AG301900 Rh6BG216400 Rh6BG216800 Rh6BG217000 Rh6BG217200 Rh6BG308000 Rh6CG218600 Rh6CG219000 Rh6CG219100 Rh6DG208400 Rh6DG208500 Rh6DG209100 Rh6DG300600
rosa_wichuraiana	Rw6G018510 Rw6G018530 Rw6G018540 Rw6G026080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2140
AccI	GTMKAC	1 cut(s)	1810
AccIII	TCCGGA	1 cut(s)	913
AciI	CCGC	2 cut(s)	1450, 1730
AclWI	GGATC	3 cut(s)	905, 918, 2112
AcsI	RAATTY	4 cut(s)	130, 346, 889, 2317
AcuI	CTGAAG	2 cut(s)	716, 1948
AfaI	GTAC	8 cut(s)	800, 997, 1243, 1264, 1709, 2036, 2132, 2277
AfiI	CCNNNNNNNGG	2 cut(s)	1995, 2140
AflIII	ACRYGT	2 cut(s)	2007, 2031
AgeI	ACCGGT	1 cut(s)	701
AjiI	CACGTC	1 cut(s)	2032
AjnI	CCWGG	6 cut(s)	564, 827, 937, 1946, 1973, 2235
AjuI	GAANNNNNNNTTGG	4 cut(s)	331, 363, 1750, 1782
Alw21I	GWGCWC	2 cut(s)	306, 868
Alw26I	GTCTC	2 cut(s)	938, 1571
AlwI	GGATC	3 cut(s)	905, 918, 2112
AlwNI	CAGNNNCTG	1 cut(s)	475
Aor13HI	TCCGGA	1 cut(s)	913
AoxI	GGCC	6 cut(s)	369, 874, 883, 961, 1760, 2145
ApoI	RAATTY	4 cut(s)	130, 346, 889, 2317
AsiGI	ACCGGT	1 cut(s)	701
Asp700I	GAANNNNTTC	1 cut(s)	326
AspA2I	CCTAGG	1 cut(s)	85
AspLEI	GCGC	1 cut(s)	2256
AspS9I	GGNCC	3 cut(s)	369, 584, 1156
AsuC2I	CCSGG	1 cut(s)	466
AsuHPI	GGTGA	7 cut(s)	837, 1025, 1231, 1285, 1433, 1486, 1552
AvaII	GGWCC	2 cut(s)	584, 1156
AvrII	CCTAGG	1 cut(s)	85
AxyI	CCTNAGG	1 cut(s)	2100
BaeI	ACNNNNGTAYC	4 cut(s)	444, 444, 477, 477
BamHI	GGATCC	1 cut(s)	910
BanII	GRGCYC	2 cut(s)	306, 684
Bbv12I	GWGCWC	2 cut(s)	306, 868
BccI	CCATC	7 cut(s)	551, 776, 1117, 1673, 2203, 2254, 2314
BceAI	ACGGC	1 cut(s)	1735
BcgI	CGANNNNNNTGC	2 cut(s)	175, 209
BciT130I	CCWGG	6 cut(s)	566, 829, 939, 1948, 1975, 2237
BciVI	GTATCC	2 cut(s)	472, 585
BclI	TGATCA	2 cut(s)	543, 667
BcnI	CCSGG	1 cut(s)	466
BcoDI	GTCTC	2 cut(s)	938, 1571
BfaI	CTAG	4 cut(s)	86, 1574, 1652, 2165
BfmI	CTRYAG	3 cut(s)	157, 180, 805
BfuI	GTATCC	2 cut(s)	472, 585
BglI	GCCNNNNNGGC	1 cut(s)	882
BlnI	CCTAGG	1 cut(s)	85
Bme1390I	CCNGG	7 cut(s)	466, 566, 829, 939, 1948, 1975, 2237
Bme18I	GGWCC	2 cut(s)	584, 1156
BmgBI	CACGTC	1 cut(s)	2032
BmgT120I	GGNCC	3 cut(s)	369, 584, 1156
BmiI	GGNNCC	4 cut(s)	912, 918, 1972, 2244
BmrFI	CCNGG	7 cut(s)	466, 566, 829, 939, 1948, 1975, 2237
BmrI	ACTGGG	1 cut(s)	636
BmsI	GCATC	4 cut(s)	195, 229, 766, 2241
BmuI	ACTGGG	1 cut(s)	636
BplI	GAGNNNNNCTC	2 cut(s)	288, 320
BpuEI	CTTGAG	2 cut(s)	1012, 1788
BpuMI	CCSGG	1 cut(s)	466
BsaJI	CCNNGG	3 cut(s)	85, 937, 1974
BsaWI	WCCGGW	3 cut(s)	701, 792, 913
BsaXI	ACNNNNNCTCC	2 cut(s)	1164, 1194
Bsc4I	CCNNNNNNNGG	2 cut(s)	1995, 2140
Bse118I	RCCGGY	1 cut(s)	701
Bse1I	ACTGG	5 cut(s)	631, 1366, 1963, 2160, 2331
Bse21I	CCTNAGG	1 cut(s)	2100
Bse3DI	GCAATG	2 cut(s)	655, 2249
BseAI	TCCGGA	1 cut(s)	913
BseBI	CCWGG	6 cut(s)	566, 829, 939, 1948, 1975, 2237
BseDI	CCNNGG	3 cut(s)	85, 937, 1974
BseGI	GGATG	5 cut(s)	1594, 2133, 2179, 2232, 2306
BseLI	CCNNNNNNNGG	2 cut(s)	1995, 2140
BseMI	GCAATG	2 cut(s)	655, 2249
BseMII	CTCAG	2 cut(s)	1983, 2091
BseNI	ACTGG	5 cut(s)	631, 1366, 1963, 2160, 2331
BseRI	GAGGAG	2 cut(s)	490, 2255
BseYI	CCCAGC	1 cut(s)	641
BshFI	GGCC	6 cut(s)	371, 876, 885, 963, 1762, 2147
BshTI	ACCGGT	1 cut(s)	701
BsiHKAI	GWGCWC	2 cut(s)	306, 868
BsiSI	CCGG	4 cut(s)	465, 702, 793, 914
BslFI	GGGAC	3 cut(s)	640, 643, 1537
BslI	CCNNNNNNNGG	2 cut(s)	1995, 2140
BsmAI	GTCTC	2 cut(s)	938, 1571
BsmFI	GGGAC	3 cut(s)	640, 643, 1537
BsmI	GAATGC	2 cut(s)	328, 1627
BsnI	GGCC	6 cut(s)	371, 876, 885, 963, 1762, 2147
Bsp1286I	GDGCHC	3 cut(s)	306, 684, 868
Bsp13I	TCCGGA	1 cut(s)	913
Bsp1407I	TGTACA	1 cut(s)	2034
Bsp143I	GATC	5 cut(s)	543, 667, 910, 2061, 2104
BspACI	CCGC	2 cut(s)	1450, 1730
BspANI	GGCC	6 cut(s)	371, 876, 885, 963, 1762, 2147
BspCNI	CTCAG	2 cut(s)	1984, 2092
BspEI	TCCGGA	1 cut(s)	913
BspHI	TCATGA	1 cut(s)	1675
BspLI	GGNNCC	4 cut(s)	912, 918, 1972, 2244
BspPI	GGATC	3 cut(s)	905, 918, 2112
BsrDI	GCAATG	2 cut(s)	655, 2249
BsrFI	RCCGGY	1 cut(s)	701
BsrGI	TGTACA	1 cut(s)	2034
BsrI	ACTGG	5 cut(s)	631, 1366, 1963, 2160, 2331
BssAI	RCCGGY	1 cut(s)	701
BssECI	CCNNGG	3 cut(s)	85, 937, 1974
BssMI	GATC	5 cut(s)	543, 667, 910, 2061, 2104
BssNAI	GTATAC	1 cut(s)	1811
BssT1I	CCWWGG	1 cut(s)	85
Bst1107I	GTATAC	1 cut(s)	1811
Bst2UI	CCWGG	6 cut(s)	566, 829, 939, 1948, 1975, 2237
Bst4CI	ACNGT	9 cut(s)	283, 809, 1000, 1118, 1528, 1582, 1673, 1853, 2020
Bst6I	CTCTTC	2 cut(s)	735, 1821
BstAPI	GCANNNNNTGC	1 cut(s)	1904
BstAUI	TGTACA	1 cut(s)	2034
BstC8I	GCNNGC	3 cut(s)	360, 1764, 1905
BstDEI	CTNAG	2 cut(s)	1992, 2100
BstEII	GGTNACC	1 cut(s)	843
BstF5I	GGATG	5 cut(s)	1594, 2133, 2179, 2232, 2306
BstHHI	GCGC	1 cut(s)	2256
BstKTI	GATC	5 cut(s)	546, 670, 913, 2064, 2107
BstMAI	GTCTC	2 cut(s)	938, 1571
BstMBI	GATC	5 cut(s)	543, 667, 910, 2061, 2104
BstMWI	GCNNNNNNNGC	4 cut(s)	368, 882, 1904, 2251
BstNI	CCWGG	6 cut(s)	566, 829, 939, 1948, 1975, 2237
BstNSI	RCATGY	1 cut(s)	2011
BstPI	GGTNACC	1 cut(s)	843
BstSCI	CCNGG	7 cut(s)	464, 564, 827, 937, 1946, 1973, 2235
BstSFI	CTRYAG	3 cut(s)	157, 180, 805
BstX2I	RGATCY	1 cut(s)	910
BstXI	CCANNNNNNTGG	2 cut(s)	1504, 2155
BstYI	RGATCY	1 cut(s)	910
BstZ17I	GTATAC	1 cut(s)	1811
Bsu36I	CCTNAGG	1 cut(s)	2100
BsuI	GTATCC	2 cut(s)	472, 585
BsuRI	GGCC	6 cut(s)	371, 876, 885, 963, 1762, 2147
BtgZI	GCGATG	1 cut(s)	1227
BtrI	CACGTC	1 cut(s)	2032
BtsCI	GGATG	5 cut(s)	1594, 2133, 2179, 2232, 2306
BtsI	GCAGTG	2 cut(s)	1169, 1320
BtsIMutI	CAGTG	6 cut(s)	624, 1169, 1320, 1587, 1849, 2025
Cac8I	GCNNGC	3 cut(s)	360, 1764, 1905
CaiI	CAGNNNCTG	1 cut(s)	475
CciI	TCATGA	1 cut(s)	1675
CfoI	GCGC	1 cut(s)	2256
Cfr10I	RCCGGY	1 cut(s)	701
Cfr13I	GGNCC	3 cut(s)	369, 584, 1156
CseI	GACGC	1 cut(s)	461
CsiI	ACCWGGT	1 cut(s)	564
Csp6I	GTAC	8 cut(s)	799, 996, 1242, 1263, 1708, 2035, 2131, 2276
CspAI	ACCGGT	1 cut(s)	701
CviAII	CATG	9 cut(s)	16, 376, 521, 547, 1676, 1711, 1823, 2008, 2191
CviQI	GTAC	8 cut(s)	799, 996, 1242, 1263, 1708, 2035, 2131, 2276
DdeI	CTNAG	2 cut(s)	1992, 2100
DpnI	GATC	5 cut(s)	545, 669, 912, 2063, 2106
DpnII	GATC	5 cut(s)	543, 667, 910, 2061, 2104
DraI	TTTAAA	1 cut(s)	1534
Eam1104I	CTCTTC	2 cut(s)	735, 1821
EarI	CTCTTC	2 cut(s)	735, 1821
Ecl136II	GAGCTC	1 cut(s)	304
Eco130I	CCWWGG	1 cut(s)	85
Eco24I	GRGCYC	2 cut(s)	306, 684
Eco32I	GATATC	1 cut(s)	1382
Eco47I	GGWCC	2 cut(s)	584, 1156
Eco53kI	GAGCTC	1 cut(s)	304
Eco57I	CTGAAG	2 cut(s)	716, 1948
Eco81I	CCTNAGG	1 cut(s)	2100
Eco91I	GGTNACC	1 cut(s)	843
EcoICRI	GAGCTC	1 cut(s)	304
EcoO109I	RGGNCCY	1 cut(s)	369
EcoO65I	GGTNACC	1 cut(s)	843
EcoRI	GAATTC	1 cut(s)	130
EcoRII	CCWGG	6 cut(s)	564, 827, 937, 1946, 1973, 2235
EcoRV	GATATC	1 cut(s)	1382
EcoT14I	CCWWGG	1 cut(s)	85
EcoT38I	GRGCYC	2 cut(s)	306, 684
ErhI	CCWWGG	1 cut(s)	85
FaeI	CATG	9 cut(s)	19, 379, 524, 550, 1679, 1714, 1826, 2011, 2194
FalI	AAGNNNNNCTT	8 cut(s)	243, 275, 311, 343, 974, 1006, 1750, 1782
FaqI	GGGAC	3 cut(s)	640, 643, 1537
FatI	CATG	9 cut(s)	15, 375, 520, 546, 1675, 1710, 1822, 2007, 2190
FauNDI	CATATG	1 cut(s)	2066
FbaI	TGATCA	2 cut(s)	543, 667
FblI	GTMKAC	1 cut(s)	1810
FokI	GGATG	5 cut(s)	1601, 2140, 2186, 2219, 2293
FriOI	GRGCYC	2 cut(s)	306, 684
FspBI	CTAG	4 cut(s)	86, 1574, 1652, 2165
GlaI	GCGC	1 cut(s)	2255
GsaI	CCCAGC	1 cut(s)	645
HaeIII	GGCC	6 cut(s)	371, 876, 885, 963, 1762, 2147
HapII	CCGG	4 cut(s)	465, 702, 793, 914
HgaI	GACGC	1 cut(s)	461
HhaI	GCGC	1 cut(s)	2256
Hin1II	CATG	9 cut(s)	19, 379, 524, 550, 1679, 1714, 1826, 2011, 2194
Hin6I	GCGC	1 cut(s)	2254
HinP1I	GCGC	1 cut(s)	2254
HindIII	AAGCTT	2 cut(s)	1901, 2216
HinfI	GANTC	7 cut(s)	383, 413, 517, 695, 824, 1648, 1779
HpaII	CCGG	4 cut(s)	465, 702, 793, 914
HphI	GGTGA	7 cut(s)	837, 1025, 1231, 1285, 1433, 1486, 1552
Hpy166II	GTNNAC	4 cut(s)	1469, 1811, 2035, 2198
Hpy188I	TCNGA	6 cut(s)	210, 412, 735, 768, 1916, 1967
Hpy8I	GTNNAC	4 cut(s)	1469, 1811, 2035, 2198
Hpy99I	CGWCG	1 cut(s)	959
HpyCH4III	ACNGT	9 cut(s)	283, 809, 1000, 1118, 1528, 1582, 1673, 1853, 2020
HpyCH4IV	ACGT	1 cut(s)	2031
HpyF10VI	GCNNNNNNNGC	4 cut(s)	368, 882, 1904, 2251
HpyF3I	CTNAG	2 cut(s)	1992, 2100
HpySE526I	ACGT	1 cut(s)	2031
Hsp92II	CATG	9 cut(s)	19, 379, 524, 550, 1679, 1714, 1826, 2011, 2194
HspAI	GCGC	1 cut(s)	2254
Kpn2I	TCCGGA	1 cut(s)	913
Ksp22I	TGATCA	2 cut(s)	543, 667
Kzo9I	GATC	5 cut(s)	543, 667, 910, 2061, 2104
LmnI	GCTCC	6 cut(s)	301, 645, 871, 1185, 1514, 2242
LweI	GCATC	4 cut(s)	195, 229, 766, 2241
MabI	ACCWGGT	1 cut(s)	564
MaeI	CTAG	4 cut(s)	86, 1574, 1652, 2165
MaeII	ACGT	1 cut(s)	2031
MaeIII	GTNAC	7 cut(s)	287, 389, 843, 1219, 1405, 1441, 1853
MalI	GATC	5 cut(s)	545, 669, 912, 2063, 2106
MboI	GATC	5 cut(s)	543, 667, 910, 2061, 2104
MfeI	CAATTG	4 cut(s)	275, 579, 834, 1626
MflI	RGATCY	1 cut(s)	910
MhlI	GDGCHC	3 cut(s)	306, 684, 868
MlyI	GAGTC	2 cut(s)	689, 1788
MmeI	TCCRAC	2 cut(s)	470, 2037
MroI	TCCGGA	1 cut(s)	913
MroXI	GAANNNNTTC	1 cut(s)	326
MseI	TTAA	8 cut(s)	246, 816, 1296, 1331, 1430, 1533, 2111, 2214
MslI	CAYNNNNRTG	2 cut(s)	525, 2189
MspA1I	CMGCKG	3 cut(s)	62, 641, 1418
MspI	CCGG	4 cut(s)	465, 702, 793, 914
MspR9I	CCNGG	7 cut(s)	466, 566, 829, 939, 1948, 1975, 2237
MunI	CAATTG	4 cut(s)	275, 579, 834, 1626
Mva1269I	GAATGC	2 cut(s)	328, 1627
MvaI	CCWGG	6 cut(s)	566, 829, 939, 1948, 1975, 2237
MwoI	GCNNNNNNNGC	4 cut(s)	368, 882, 1904, 2251
NciI	CCSGG	1 cut(s)	466
NdeI	CATATG	1 cut(s)	2066
NdeII	GATC	5 cut(s)	543, 667, 910, 2061, 2104
NlaIII	CATG	9 cut(s)	19, 379, 524, 550, 1679, 1714, 1826, 2011, 2194
NlaIV	GGNNCC	4 cut(s)	912, 918, 1972, 2244
NmuCI	GTSAC	4 cut(s)	287, 843, 1219, 1853
NspI	RCATGY	1 cut(s)	2011
PagI	TCATGA	1 cut(s)	1675
PciI	ACATGT	1 cut(s)	2007
PcsI	WCGNNNNNNNCGW	2 cut(s)	760, 951
PctI	GAATGC	2 cut(s)	328, 1627
PdmI	GAANNNNTTC	1 cut(s)	326
PfeI	GAWTC	5 cut(s)	383, 413, 517, 824, 1648
PflMI	CCANNNNNTGG	1 cut(s)	2140
PfoI	TCCNGGA	2 cut(s)	1946, 2235
PinAI	ACCGGT	1 cut(s)	701
PleI	GAGTC	2 cut(s)	689, 1787
PpsI	GAGTC	2 cut(s)	689, 1787
PscI	ACATGT	1 cut(s)	2007
Psp124BI	GAGCTC	1 cut(s)	306
Psp6I	CCWGG	6 cut(s)	564, 827, 937, 1946, 1973, 2235
PspEI	GGTNACC	1 cut(s)	843
PspFI	CCCAGC	1 cut(s)	641
PspGI	CCWGG	6 cut(s)	564, 827, 937, 1946, 1973, 2235
PspN4I	GGNNCC	4 cut(s)	912, 918, 1972, 2244
PspPI	GGNCC	3 cut(s)	369, 584, 1156
PstNI	CAGNNNCTG	1 cut(s)	475
PsuI	RGATCY	1 cut(s)	910
PvuII	CAGCTG	3 cut(s)	62, 641, 1418
RsaI	GTAC	8 cut(s)	800, 997, 1243, 1264, 1709, 2036, 2132, 2277
RsaNI	GTAC	8 cut(s)	799, 996, 1242, 1263, 1708, 2035, 2131, 2276
RseI	CAYNNNNRTG	2 cut(s)	525, 2189
SacI	GAGCTC	1 cut(s)	306
SaqAI	TTAA	8 cut(s)	246, 816, 1296, 1331, 1430, 1533, 2111, 2214
Sau3AI	GATC	5 cut(s)	543, 667, 910, 2061, 2104
Sau96I	GGNCC	3 cut(s)	369, 584, 1156
SchI	GAGTC	2 cut(s)	689, 1788
ScrFI	CCNGG	7 cut(s)	466, 566, 829, 939, 1948, 1975, 2237
SduI	GDGCHC	3 cut(s)	306, 684, 868
SexAI	ACCWGGT	1 cut(s)	564
SfaNI	GCATC	4 cut(s)	195, 229, 766, 2241
SfcI	CTRYAG	3 cut(s)	157, 180, 805
SfiI	GGCCNNNNNGGCC	1 cut(s)	882
SinI	GGWCC	2 cut(s)	584, 1156
SmiMI	CAYNNNNRTG	2 cut(s)	525, 2189
SmlI	CTYRAG	2 cut(s)	991, 1803
SmoI	CTYRAG	2 cut(s)	991, 1803
SsiI	CCGC	2 cut(s)	1450, 1730
SspI	AATATT	2 cut(s)	611, 1294
SspMI	CTAG	4 cut(s)	86, 1574, 1652, 2165
SstI	GAGCTC	1 cut(s)	306
StyD4I	CCNGG	7 cut(s)	464, 564, 827, 937, 1946, 1973, 2235
StyI	CCWWGG	1 cut(s)	85
TaaI	ACNGT	9 cut(s)	283, 809, 1000, 1118, 1528, 1582, 1673, 1853, 2020
TaiI	ACGT	1 cut(s)	2034
TaqI	TCGA	7 cut(s)	128, 195, 438, 954, 2012, 2084, 2261
TaqII	GACCGA	1 cut(s)	1898
TatI	WGTACW	4 cut(s)	798, 995, 1707, 2034
TfiI	GAWTC	5 cut(s)	383, 413, 517, 824, 1648
Tru1I	TTAA	8 cut(s)	246, 816, 1296, 1331, 1430, 1533, 2111, 2214
Tru9I	TTAA	8 cut(s)	246, 816, 1296, 1331, 1430, 1533, 2111, 2214
TscAI	CASTG	6 cut(s)	631, 1169, 1327, 1587, 1856, 2025
TseFI	GTSAC	4 cut(s)	287, 843, 1219, 1853
Tsp45I	GTSAC	4 cut(s)	287, 843, 1219, 1853
TspDTI	ATGAA	9 cut(s)	17, 940, 1017, 1035, 1605, 1634, 1839, 2166, 2279
TspRI	CASTG	6 cut(s)	631, 1169, 1327, 1587, 1856, 2025
Van91I	CCANNNNNTGG	1 cut(s)	2140
VpaK11BI	GGWCC	2 cut(s)	584, 1156
XapI	RAATTY	4 cut(s)	130, 346, 889, 2317
XceI	RCATGY	1 cut(s)	2011
XmaJI	CCTAGG	1 cut(s)	85
XmiI	GTMKAC	1 cut(s)	1810
XmnI	GAANNNNTTC	1 cut(s)	326
XspI	CTAG	4 cut(s)	86, 1574, 1652, 2165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.