Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001464

Physical Location & Seq

Genomic Coordinates Forward (+)

33343240 .. 33345552

Gene Structure 2313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00192230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGCTGTAATTTTTTTTTTCCTTCATCTTCTTCTTCAAGTTGCAGCTGCTCAACAAGGAAATATCAGCCTAGGTGCTTCTCTATATCCCAATGACAACTCATATTGGTTATCGAATTCGGGTCAGTTTGCCTTTGGCTTCTACAGGCAAGGAAATGACCTCGCTGTAGGCATATGGTTTGAGAAAACCATTCCGAAAACAGTCATCTGGACAGCAAATCGTGATGCTGTTAAACAAGAGCCACTTCCTAATGATGTTCAATTGACTGTGAGGGACAGTGGAGTTGAGCTCATTTCAACAAGCAAGAATGCCTTCCTTATACTAATTTCAAATTCTTCCCAGCCTGCTGTCAGGGCCTCCATGCTTGATTCAGGTAACTTTGTGCTCTACAATTCTAATTCAAAGATCATTTGGCAGACTTTTGATGTTCCAACAGATACCATTGTATCCGGGCAGCGTCTGTTGGCTGGAACAAAGCTCATCTCCTCCATCTCGAACACGAATCACGCAAGTGGAAGGTTTCAAGTGATCATGCATAGTGATGGCAACCTGGTTCAGTATCCAATTGATCCGTTGAGATATGGTCCTCGATATTCTTATTGGAGCTCTGGGACATTAGGAGCTGGGAACAATGTGTCCCTTAATCTTGATCAAAATGAGGGGCTCCGTCTTCTTAATTCCACTGGTTTCAAGATAAAAAGTTTTCCTCTTCAGAATGGCCTTTCTATGAATCGTGGCTATCGTCTCACGATTGATGCTGATGGAATACTCCGGTTGTACTCCTACAGTTTGGTTCTGAATGATTCCTGGTCAATTGAGTGGTCACCAAATGTTGATAAGTGTGCTCCTCTTGGCCTCTGTGGCCTAAATTCTTATTGTGTTCTTGTGGATCAGGAACCTTCTTGTGTATGTCTCCCCAGTTTCGCTTTCATCGACAAGGGCCAAAGATATCTAGGTTGCAAGAGAAACTTGAGTACAGTTGGTTGCAAAGATGGGGAAACTTCATATTCTATTGTTGATGTGGATAACATAGATTGGGAAAACACTACATACTCTATTCTATCATTGAATAAGACTGGTTGTAGAGAGGACTGTTTGATGGATTTCAACTGCGAAGCTGCGATATTTAGGGACCAGCAGTGCAGAAAAGAAAAGCTCCCTCTAAGATTTGGAAGAACTCGCAAAGCTGGTGTGGTGACAACCTTTGTTAAAAAGGGTACTACTGATGAGAGTTCCAGTACAAAAAGGGGGAGCAGGGGAAGAAAAAATGTTGACAAAATCATATTTATCAGCAGCATTGCAACTTTAACTTTTTCACTTGTTATTATGGCAATTACTGGTGTTGTTATATATAGATATCGTGTTTGGAATTACCGAAAGCTTACAAATTCTGCTGGTGAAGGGTTGATTGAAGGTGTTACACTGCGGTCATATACATATTGTGAACTTGAAAAGGCAAGCAACGGCTTCACCAATCAAGTGGGTAAAGGAGCTTTTGGGACAGTTTTTAAAGGGGTGATTGGTGGGAGTGAAGTGGCAATCAAGCAACTAGAGACAGTGGTGGATGAAGGAGAGCGAGAGTTTCGTAATGAGATGAATGCAATTGGGAGAACTCATCACAAGAATCTAGTGAAATTGCTTGGCTACTGTCATGATGGAACAAACAGGCTTCTGGTTTATGAGTACATGACCAATGGCTCACTAGCGAAATTCTTTTTCAAATCTCATGGTGGAAGGCCAACTTGGGAGGAAAGAGTCAGCACAGCCCTCAATGTAGCTCAAGGTATACTATATCTACATGAAGAGTGTGAGACACAAATCATTCATTGTGACATCAAACCAGAAAATATACTGATGACTGAGCAGAAATGTGCAAAGCTTGCTGATTTCGGATTAGCCAAGTTGTTGAAAGCTGACCAATCCAGGACATATACTGGCTTCAGAGGAACCCGGGGTTATGTTGCACCTGAGTGGCACAGGAACATATCGATAACAGTGAAAGCAGACGTGTACAGCTTTGGGATTGTATTGTTGGAGATCATATGCTGTCAGAGAAGTTCGACCATGGACATACCTGAGGATCAATTAACTCTTGAGAATTGGATGTACCATTGTTTAGAGGCCAATGAACTGGATAAGCTAGTGAAGGATGATGATGAGATTGACACGAGTAAACTACGGGAGATGGTTAAGCTTGGTCTTTGCTGCATCCAGGAGGAGCCATCATTGCGCCCTTCGATGAAGAAGGTGGTACTAATGCTGGAAGGGATACTAGAGATACCATCCCCTCCAAATTATTTCAGTTCTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

770

Amino Acids

86.13

Weight (kDa)

7.42

Isoelectric Point (pI)

27.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	67 - 156	8.7e-13	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	491 - 752	2.2e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	492 - 751	2.8e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001464)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g14250
malus_domestica	MD05G1020600.v1.1
prunus_persica	Prupe.8G024600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0276401 RchiOBHm_Chr6g0276411 RchiOBHm_Chr6g0276421 RchiOBHm_Chr6g0276441 RchiOBHm_Chr6g0276461 RchiOBHm_Chr6g0276511 RchiOBHm_Chr6g0276531 RchiOBHm_Chr6g0287831
rosa_laevigata	RLG00000013394 RLG00000013396
rosa_multiflora	Rmu_co8365989.1_g000001 Rmu_sc0003877.1_g000005 Rmu_sc0004126.1_g000003 Rmu_sc0004126.1_g000009 Rmu_sc0004126.1_g000010 Rmu_sc0004126.1_g000014 Rmu_sc0004126.1_g000016 Rmu_sc0004248.1_g000005 Rmu_sc0004248.1_g000009 Rmu_sc0004248.1_g000029 Rmu_sc0007724.1_g000004 Rmu_ssc0000059.1_g000026
rosa_roxburghii	Rroxscaffold_7G00180750 Rroxscaffold_7G00181160 Rroxscaffold_7G00192200 Rroxscaffold_7G00192230 Rroxscaffold_7G00192240
rosa_rugosa	Rorug06G0101300 Rorug06G0101500 Rorug06G0101600
rosa_samantha	Rh6AG212100 Rh6AG212200 Rh6AG301900 Rh6BG216400 Rh6BG216800 Rh6BG217000 Rh6BG217200 Rh6BG308000 Rh6CG218600 Rh6CG219000 Rh6CG219100 Rh6DG208400 Rh6DG208500 Rh6DG209100 Rh6DG300600
rosa_wichuraiana	Rw6G018510 Rw6G018530 Rw6G018540 Rw6G026080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1786
AciI	CCGC	1 cut(s)	1426
AclWI	GGATC	3 cut(s)	563, 897, 2088
AcsI	RAATTY	5 cut(s)	115, 331, 868, 1387, 1709
AcuI	CTGAAG	2 cut(s)	695, 1924
AfaI	GTAC	8 cut(s)	779, 976, 1219, 1240, 1685, 2012, 2108, 2253
AflIII	ACRYGT	1 cut(s)	2007
AjiI	CACGTC	1 cut(s)	2008
AjnI	CCWGG	4 cut(s)	549, 806, 1922, 2211
AjuI	GAANNNNNNNTTGG	2 cut(s)	1726, 1758
AleI	CACNNNNGTG	2 cut(s)	510, 1969
AloI	GAACNNNNNNTCC	2 cut(s)	620, 652
Alw21I	GWGCWC	4 cut(s)	291, 387, 608, 847
Alw26I	GTCTC	4 cut(s)	749, 917, 1547, 1805
AlwI	GGATC	3 cut(s)	563, 897, 2088
AlwNI	CAGNNNCTG	1 cut(s)	460
Ama87I	CYCGRG	1 cut(s)	1950
AoxI	GGCC	7 cut(s)	354, 718, 853, 862, 940, 1736, 2121
ApeKI	GCWGC	6 cut(s)	44, 47, 454, 1118, 1293, 2205
ApoI	RAATTY	5 cut(s)	115, 331, 868, 1387, 1709
Asp700I	GAANNNNTTC	1 cut(s)	311
AspA2I	CCTAGG	1 cut(s)	70
AspLEI	GCGC	1 cut(s)	2232
AspS9I	GGNCC	4 cut(s)	354, 584, 940, 1132
AsuC2I	CCSGG	3 cut(s)	451, 1951, 1952
AsuHPI	GGTGA	5 cut(s)	816, 1207, 1409, 1462, 1528
AvaI	CYCGRG	1 cut(s)	1950
AvaII	GGWCC	2 cut(s)	584, 1132
AvrII	CCTAGG	1 cut(s)	70
AxyI	CCTNAGG	1 cut(s)	2076
BaeI	ACNNNNGTAYC	4 cut(s)	429, 429, 462, 462
BanII	GRGCYC	3 cut(s)	291, 608, 666
BauI	CACGAG	1 cut(s)	2167
BbsI	GAAGAC	1 cut(s)	662
Bbv12I	GWGCWC	4 cut(s)	291, 387, 608, 847
BbvI	GCAGC	6 cut(s)	34, 56, 466, 1105, 1305, 2192
BccI	CCATC	9 cut(s)	497, 536, 755, 986, 1093, 1649, 2179, 2230, 2290
BceAI	ACGGC	1 cut(s)	1480
BciT130I	CCWGG	4 cut(s)	551, 808, 1924, 2213
BciVI	GTATCC	3 cut(s)	457, 570, 2262
BclI	TGATCA	2 cut(s)	528, 649
BcnI	CCSGG	3 cut(s)	451, 1951, 1952
BcoDI	GTCTC	4 cut(s)	749, 917, 1547, 1805
BfaI	CTAG	8 cut(s)	71, 953, 1550, 1628, 1703, 2141, 2273, 2311
BfmI	CTRYAG	3 cut(s)	142, 165, 784
BfuI	GTATCC	3 cut(s)	457, 570, 2262
BglI	GCCNNNNNGGC	1 cut(s)	861
BisI	GCNGC	6 cut(s)	45, 48, 455, 1119, 1294, 2206
BlnI	CCTAGG	1 cut(s)	70
BlsI	GCNGC	6 cut(s)	46, 49, 456, 1120, 1295, 2207
Bme1390I	CCNGG	7 cut(s)	451, 551, 808, 1924, 1951, 1952, 2213
Bme18I	GGWCC	2 cut(s)	584, 1132
BmeT110I	CYCGRG	1 cut(s)	1950
BmgBI	CACGTC	1 cut(s)	2008
BmgT120I	GGNCC	4 cut(s)	354, 584, 940, 1132
BmiI	GGNNCC	5 cut(s)	665, 897, 1133, 1948, 2220
BmrFI	CCNGG	7 cut(s)	451, 551, 808, 1924, 1951, 1952, 2213
BmrI	ACTGGG	1 cut(s)	912
BmsI	GCATC	3 cut(s)	214, 745, 2217
BmuI	ACTGGG	1 cut(s)	912
BpiI	GAAGAC	1 cut(s)	662
BplI	GAGNNNNNCTC	2 cut(s)	273, 305
BpuEI	CTTGAG	3 cut(s)	991, 1764, 2114
BpuMI	CCSGG	3 cut(s)	451, 1951, 1952
Bsa29I	ATCGAT	1 cut(s)	1988
BsaJI	CCNNGG	4 cut(s)	70, 1950, 1951, 2064
BsaWI	WCCGGW	1 cut(s)	771
Bse1I	ACTGG	7 cut(s)	688, 918, 1081, 1236, 1342, 1939, 2136
Bse21I	CCTNAGG	1 cut(s)	2076
Bse3DI	GCAATG	2 cut(s)	1296, 2225
BseBI	CCWGG	4 cut(s)	551, 808, 1924, 2213
BseCI	ATCGAT	1 cut(s)	1988
BseDI	CCNNGG	4 cut(s)	70, 1950, 1951, 2064
BseGI	GGATG	5 cut(s)	1570, 2109, 2155, 2208, 2282
BseMI	GCAATG	2 cut(s)	1296, 2225
BseMII	CTCAG	3 cut(s)	1851, 1959, 2067
BseNI	ACTGG	7 cut(s)	688, 918, 1081, 1236, 1342, 1939, 2136
BseRI	GAGGAG	3 cut(s)	475, 837, 2231
BseXI	GCAGC	6 cut(s)	34, 56, 466, 1105, 1305, 2192
BseYI	CCCAGC	2 cut(s)	339, 623
BsgI	GTGCAG	1 cut(s)	1162
BshFI	GGCC	7 cut(s)	356, 720, 855, 864, 942, 1738, 2123
BshVI	ATCGAT	1 cut(s)	1988
BsiHKAI	GWGCWC	4 cut(s)	291, 387, 608, 847
BsiHKCI	CYCGRG	1 cut(s)	1950
BsiSI	CCGG	3 cut(s)	450, 772, 1951
BslFI	GGGAC	5 cut(s)	287, 622, 625, 1145, 1513
BsmAI	GTCTC	4 cut(s)	749, 917, 1547, 1805
BsmBI	CGTCTC	1 cut(s)	749
BsmFI	GGGAC	5 cut(s)	287, 622, 625, 1145, 1513
BsmI	GAATGC	2 cut(s)	313, 1603
BsnI	GGCC	7 cut(s)	356, 720, 855, 864, 942, 1738, 2123
BsoBI	CYCGRG	1 cut(s)	1950
Bsp1286I	GDGCHC	5 cut(s)	291, 387, 608, 666, 847
Bsp1407I	TGTACA	1 cut(s)	2010
Bsp143I	GATC	7 cut(s)	405, 528, 568, 649, 889, 2037, 2080
Bsp19I	CCATGG	1 cut(s)	2064
BspACI	CCGC	1 cut(s)	1426
BspANI	GGCC	7 cut(s)	356, 720, 855, 864, 942, 1738, 2123
BspCNI	CTCAG	3 cut(s)	1852, 1960, 2068
BspDI	ATCGAT	1 cut(s)	1988
BspHI	TCATGA	1 cut(s)	1651
BspLI	GGNNCC	5 cut(s)	665, 897, 1133, 1948, 2220
BspPI	GGATC	3 cut(s)	563, 897, 2088
BsrDI	GCAATG	2 cut(s)	1296, 2225
BsrGI	TGTACA	1 cut(s)	2010
BsrI	ACTGG	7 cut(s)	688, 918, 1081, 1236, 1342, 1939, 2136
BssECI	CCNNGG	4 cut(s)	70, 1950, 1951, 2064
BssMI	GATC	7 cut(s)	405, 528, 568, 649, 889, 2037, 2080
BssNAI	GTATAC	1 cut(s)	1787
BssSI	CACGAG	1 cut(s)	2167
BssT1I	CCWWGG	2 cut(s)	70, 2064
Bst1107I	GTATAC	1 cut(s)	1787
Bst2BI	CACGAG	1 cut(s)	2167
Bst2UI	CCWGG	4 cut(s)	551, 808, 1924, 2213
Bst6I	CTCTTC	2 cut(s)	714, 1797
BstAPI	GCANNNNNTGC	1 cut(s)	1880
BstAUI	TGTACA	1 cut(s)	2010
BstC8I	GCNNGC	3 cut(s)	345, 1459, 1881
BstDEI	CTNAG	4 cut(s)	1163, 1860, 1968, 2076
BstDSI	CCRYGG	1 cut(s)	2064
BstEII	GGTNACC	1 cut(s)	822
BstF5I	GGATG	5 cut(s)	1570, 2109, 2155, 2208, 2282
BstHHI	GCGC	1 cut(s)	2232
BstKTI	GATC	7 cut(s)	408, 531, 571, 652, 892, 2040, 2083
BstMAI	GTCTC	4 cut(s)	749, 917, 1547, 1805
BstMBI	GATC	7 cut(s)	405, 528, 568, 649, 889, 2037, 2080
BstMWI	GCNNNNNNNGC	4 cut(s)	353, 861, 1880, 2227
BstNI	CCWGG	4 cut(s)	551, 808, 1924, 2213
BstPI	GGTNACC	1 cut(s)	822
BstSCI	CCNGG	7 cut(s)	449, 549, 806, 1922, 1949, 1950, 2211
BstSFI	CTRYAG	3 cut(s)	142, 165, 784
BstV1I	GCAGC	6 cut(s)	34, 56, 466, 1105, 1305, 2192
BstV2I	GAAGAC	1 cut(s)	662
BstXI	CCANNNNNNTGG	2 cut(s)	1480, 2131
BstZ17I	GTATAC	1 cut(s)	1787
Bsu15I	ATCGAT	1 cut(s)	1988
Bsu36I	CCTNAGG	1 cut(s)	2076
BsuI	GTATCC	3 cut(s)	457, 570, 2262
BsuRI	GGCC	7 cut(s)	356, 720, 855, 864, 942, 1738, 2123
BsuTUI	ATCGAT	1 cut(s)	1988
BtgI	CCRYGG	1 cut(s)	2064
BtrI	CACGTC	1 cut(s)	2008
BtsCI	GGATG	5 cut(s)	1570, 2109, 2155, 2208, 2282
BtsI	GCAGTG	2 cut(s)	1145, 1421
BtsIMutI	CAGTG	6 cut(s)	283, 681, 1145, 1421, 1563, 2001
Cac8I	GCNNGC	3 cut(s)	345, 1459, 1881
CaiI	CAGNNNCTG	1 cut(s)	460
CciI	TCATGA	1 cut(s)	1651
CfoI	GCGC	1 cut(s)	2232
Cfr13I	GGNCC	4 cut(s)	354, 584, 940, 1132
Cfr9I	CCCGGG	1 cut(s)	1950
ClaI	ATCGAT	1 cut(s)	1988
CseI	GACGC	1 cut(s)	446
CsiI	ACCWGGT	1 cut(s)	549
Csp6I	GTAC	8 cut(s)	778, 975, 1218, 1239, 1684, 2011, 2107, 2252
CviAII	CATG	7 cut(s)	361, 532, 1652, 1687, 1727, 1799, 2065
CviQI	GTAC	8 cut(s)	778, 975, 1218, 1239, 1684, 2011, 2107, 2252
DdeI	CTNAG	4 cut(s)	1163, 1860, 1968, 2076
DpnI	GATC	7 cut(s)	407, 530, 570, 651, 891, 2039, 2082
DpnII	GATC	7 cut(s)	405, 528, 568, 649, 889, 2037, 2080
DraI	TTTAAA	1 cut(s)	1510
Eam1104I	CTCTTC	2 cut(s)	714, 1797
EarI	CTCTTC	2 cut(s)	714, 1797
Ecl136II	GAGCTC	2 cut(s)	289, 606
Eco130I	CCWWGG	2 cut(s)	70, 2064
Eco24I	GRGCYC	3 cut(s)	291, 608, 666
Eco32I	GATATC	2 cut(s)	950, 1358
Eco47I	GGWCC	2 cut(s)	584, 1132
Eco53kI	GAGCTC	2 cut(s)	289, 606
Eco57I	CTGAAG	2 cut(s)	695, 1924
Eco81I	CCTNAGG	1 cut(s)	2076
Eco88I	CYCGRG	1 cut(s)	1950
Eco91I	GGTNACC	1 cut(s)	822
EcoICRI	GAGCTC	2 cut(s)	289, 606
EcoO109I	RGGNCCY	1 cut(s)	354
EcoO65I	GGTNACC	1 cut(s)	822
EcoRI	GAATTC	1 cut(s)	115
EcoRII	CCWGG	4 cut(s)	549, 806, 1922, 2211
EcoRV	GATATC	2 cut(s)	950, 1358
EcoT14I	CCWWGG	2 cut(s)	70, 2064
EcoT22I	ATGCAT	1 cut(s)	537
EcoT38I	GRGCYC	3 cut(s)	291, 608, 666
ErhI	CCWWGG	2 cut(s)	70, 2064
Esp3I	CGTCTC	1 cut(s)	749
FaeI	CATG	7 cut(s)	364, 535, 1655, 1690, 1730, 1802, 2068
FalI	AAGNNNNNCTT	8 cut(s)	228, 260, 296, 328, 953, 985, 1726, 1758
FaqI	GGGAC	5 cut(s)	287, 622, 625, 1145, 1513
FatI	CATG	7 cut(s)	360, 531, 1651, 1686, 1726, 1798, 2064
FauNDI	CATATG	2 cut(s)	173, 2042
FbaI	TGATCA	2 cut(s)	528, 649
FblI	GTMKAC	1 cut(s)	1786
Fnu4HI	GCNGC	6 cut(s)	45, 48, 455, 1119, 1294, 2206
FokI	GGATG	5 cut(s)	1577, 2116, 2162, 2195, 2269
FriOI	GRGCYC	3 cut(s)	291, 608, 666
Fsp4HI	GCNGC	6 cut(s)	45, 48, 455, 1119, 1294, 2206
FspBI	CTAG	8 cut(s)	71, 953, 1550, 1628, 1703, 2141, 2273, 2311
GlaI	GCGC	1 cut(s)	2231
GluI	GCNGC	6 cut(s)	45, 48, 455, 1119, 1294, 2206
GsaI	CCCAGC	2 cut(s)	343, 627
HaeIII	GGCC	7 cut(s)	356, 720, 855, 864, 942, 1738, 2123
HapII	CCGG	3 cut(s)	450, 772, 1951
HgaI	GACGC	1 cut(s)	446
HhaI	GCGC	1 cut(s)	2232
Hin1II	CATG	7 cut(s)	364, 535, 1655, 1690, 1730, 1802, 2068
Hin6I	GCGC	1 cut(s)	2230
HinP1I	GCGC	1 cut(s)	2230
HincII	GTYRAC	1 cut(s)	1273
HindII	GTYRAC	1 cut(s)	1273
HindIII	AAGCTT	3 cut(s)	1379, 1877, 2192
HinfI	GANTC	6 cut(s)	368, 502, 730, 803, 1624, 1755
HpaII	CCGG	3 cut(s)	450, 772, 1951
HphI	GGTGA	5 cut(s)	816, 1207, 1409, 1462, 1528
Hpy166II	GTNNAC	5 cut(s)	1273, 1445, 1787, 2011, 2174
Hpy188I	TCNGA	6 cut(s)	195, 714, 798, 1892, 1943, 2052
Hpy188III	TCNNGA	9 cut(s)	208, 221, 493, 647, 691, 748, 893, 1652, 2093
Hpy8I	GTNNAC	5 cut(s)	1273, 1445, 1787, 2011, 2174
HpyCH4IV	ACGT	1 cut(s)	2007
HpyF10VI	GCNNNNNNNGC	4 cut(s)	353, 861, 1880, 2227
HpyF3I	CTNAG	4 cut(s)	1163, 1860, 1968, 2076
HpySE526I	ACGT	1 cut(s)	2007
Hsp92II	CATG	7 cut(s)	364, 535, 1655, 1690, 1730, 1802, 2068
HspAI	GCGC	1 cut(s)	2230
Ksp22I	TGATCA	2 cut(s)	528, 649
Kzo9I	GATC	7 cut(s)	405, 528, 568, 649, 889, 2037, 2080
LmnI	GCTCC	8 cut(s)	603, 620, 669, 850, 1161, 1251, 1490, 2218
Lsp1109I	GCAGC	6 cut(s)	34, 56, 466, 1105, 1305, 2192
LweI	GCATC	3 cut(s)	214, 745, 2217
MabI	ACCWGGT	1 cut(s)	549
MaeI	CTAG	8 cut(s)	71, 953, 1550, 1628, 1703, 2141, 2273, 2311
MaeII	ACGT	1 cut(s)	2007
MaeIII	GTNAC	5 cut(s)	374, 822, 1195, 1417, 1829
MalI	GATC	7 cut(s)	407, 530, 570, 651, 891, 2039, 2082
MboI	GATC	7 cut(s)	405, 528, 568, 649, 889, 2037, 2080
MfeI	CAATTG	4 cut(s)	260, 564, 813, 1602
MhlI	GDGCHC	5 cut(s)	291, 387, 608, 666, 847
MlyI	GAGTC	1 cut(s)	1764
MmeI	TCCRAC	2 cut(s)	455, 2013
Mph1103I	ATGCAT	1 cut(s)	537
MroXI	GAANNNNTTC	1 cut(s)	311
MseI	TTAA	8 cut(s)	231, 642, 675, 1209, 1307, 1509, 2087, 2190
MslI	CAYNNNNRTG	3 cut(s)	510, 540, 1969
MspA1I	CMGCKG	1 cut(s)	47
MspI	CCGG	3 cut(s)	450, 772, 1951
MspR9I	CCNGG	7 cut(s)	451, 551, 808, 1924, 1951, 1952, 2213
MunI	CAATTG	4 cut(s)	260, 564, 813, 1602
Mva1269I	GAATGC	2 cut(s)	313, 1603
MvaI	CCWGG	4 cut(s)	551, 808, 1924, 2213
MwoI	GCNNNNNNNGC	4 cut(s)	353, 861, 1880, 2227
NciI	CCSGG	3 cut(s)	451, 1951, 1952
NcoI	CCATGG	1 cut(s)	2064
NdeI	CATATG	2 cut(s)	173, 2042
NdeII	GATC	7 cut(s)	405, 528, 568, 649, 889, 2037, 2080
NlaIII	CATG	7 cut(s)	364, 535, 1655, 1690, 1730, 1802, 2068
NlaIV	GGNNCC	5 cut(s)	665, 897, 1133, 1948, 2220
NmuCI	GTSAC	3 cut(s)	822, 1195, 1829
NsiI	ATGCAT	1 cut(s)	537
OliI	CACNNNNGTG	2 cut(s)	510, 1969
PagI	TCATGA	1 cut(s)	1651
PcsI	WCGNNNNNNNCGW	2 cut(s)	739, 930
PctI	GAATGC	2 cut(s)	313, 1603
PdmI	GAANNNNTTC	1 cut(s)	311
PfeI	GAWTC	5 cut(s)	368, 502, 730, 803, 1624
PfoI	TCCNGGA	2 cut(s)	1922, 2211
PkrI	GCNGC	6 cut(s)	46, 49, 456, 1120, 1295, 2207
PleI	GAGTC	1 cut(s)	1763
PpsI	GAGTC	1 cut(s)	1763
Psp124BI	GAGCTC	2 cut(s)	291, 608
Psp6I	CCWGG	4 cut(s)	549, 806, 1922, 2211
PspEI	GGTNACC	1 cut(s)	822
PspFI	CCCAGC	2 cut(s)	339, 623
PspGI	CCWGG	4 cut(s)	549, 806, 1922, 2211
PspN4I	GGNNCC	5 cut(s)	665, 897, 1133, 1948, 2220
PspPI	GGNCC	4 cut(s)	354, 584, 940, 1132
PstNI	CAGNNNCTG	1 cut(s)	460
PvuII	CAGCTG	1 cut(s)	47
RsaI	GTAC	8 cut(s)	779, 976, 1219, 1240, 1685, 2012, 2108, 2253
RsaNI	GTAC	8 cut(s)	778, 975, 1218, 1239, 1684, 2011, 2107, 2252
RseI	CAYNNNNRTG	3 cut(s)	510, 540, 1969
SacI	GAGCTC	2 cut(s)	291, 608
SaqAI	TTAA	8 cut(s)	231, 642, 675, 1209, 1307, 1509, 2087, 2190
SatI	GCNGC	6 cut(s)	45, 48, 455, 1119, 1294, 2206
Sau3AI	GATC	7 cut(s)	405, 528, 568, 649, 889, 2037, 2080
Sau96I	GGNCC	4 cut(s)	354, 584, 940, 1132
SchI	GAGTC	1 cut(s)	1764
ScrFI	CCNGG	7 cut(s)	451, 551, 808, 1924, 1951, 1952, 2213
SduI	GDGCHC	5 cut(s)	291, 387, 608, 666, 847
SexAI	ACCWGGT	1 cut(s)	549
SfaNI	GCATC	3 cut(s)	214, 745, 2217
SfcI	CTRYAG	3 cut(s)	142, 165, 784
SfiI	GGCCNNNNNGGCC	1 cut(s)	861
SinI	GGWCC	2 cut(s)	584, 1132
SmaI	CCCGGG	1 cut(s)	1952
SmiMI	CAYNNNNRTG	3 cut(s)	510, 540, 1969
SmlI	CTYRAG	3 cut(s)	970, 1779, 2093
SmoI	CTYRAG	3 cut(s)	970, 1779, 2093
SsiI	CCGC	1 cut(s)	1426
SspMI	CTAG	8 cut(s)	71, 953, 1550, 1628, 1703, 2141, 2273, 2311
SstI	GAGCTC	2 cut(s)	291, 608
StyD4I	CCNGG	7 cut(s)	449, 549, 806, 1922, 1949, 1950, 2211
StyI	CCWWGG	2 cut(s)	70, 2064
TaiI	ACGT	1 cut(s)	2010
TaqI	TCGA	7 cut(s)	113, 494, 589, 933, 1988, 2060, 2237
TatI	WGTACW	5 cut(s)	777, 974, 1238, 1683, 2010
TfiI	GAWTC	5 cut(s)	368, 502, 730, 803, 1624
Tru1I	TTAA	8 cut(s)	231, 642, 675, 1209, 1307, 1509, 2087, 2190
Tru9I	TTAA	8 cut(s)	231, 642, 675, 1209, 1307, 1509, 2087, 2190
TscAI	CASTG	6 cut(s)	283, 688, 1145, 1428, 1563, 2001
TseFI	GTSAC	3 cut(s)	822, 1195, 1829
TseI	GCWGC	6 cut(s)	44, 47, 454, 1118, 1293, 2205
Tsp45I	GTSAC	3 cut(s)	822, 1195, 1829
TspGWI	ACGGA	2 cut(s)	561, 656
TspMI	CCCGGG	1 cut(s)	1950
TspRI	CASTG	6 cut(s)	283, 688, 1145, 1428, 1563, 2001
VpaK11BI	GGWCC	2 cut(s)	584, 1132
XapI	RAATTY	5 cut(s)	115, 331, 868, 1387, 1709
XmaI	CCCGGG	1 cut(s)	1950
XmaJI	CCTAGG	1 cut(s)	70
XmiI	GTMKAC	1 cut(s)	1786
XmnI	GAANNNNTTC	1 cut(s)	311
XspI	CTAG	8 cut(s)	71, 953, 1550, 1628, 1703, 2141, 2273, 2311
Zsp2I	ATGCAT	1 cut(s)	537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.