Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001464

Physical Location & Seq

Genomic Coordinates Reverse (-)

38475633 .. 38477969

Gene Structure 2337 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24801

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGCTGCAACTTTTCTTTTCCTTCTTCTTCTTCTTCAAGTTGCAGCTGCTCAACAAGGGAATATCAGCCTAGGTGCTTCTCTATATCCCAATAACAACTCATATTGGTTATCGAATTCGGGTCAGTTTGCCTTTGGCTTCTACGGGCAAGGAAATGACCTAGCTGTAGGCATCTGGTTTGAGAAAACCAATCCGAAAACAGTCATCTGGACAGCAAATCGTGATGCTGTTAAACAAGAGCCGCTTCCTAATGATGTTCAATTGACTGTGAGGGACAGTGGAGTTGATCGAGCTCAGTTCAACCAGCAAGAATGCCTTCCTTATACCAATTTCAAATTCTTCCCAGCTTGCTGTCGATCAGGGCCTCCATGCTTGATTCAGACTTTTGATATTCCAACAGATACCATTGTATCCGGGCAGCGTCTGTTGGCTGGAACAAAGCTCATCTCCTCCATATCAAAGACGAATCACGCAAGTGGAAGATTTAAAGTGGTCATGCAAAGAGATGGCAACTTGGTTCAATATCCAAATATTGATCAATTTACATTGAGTTCTGATGAATATTCTTATTGGAACCCGGGGACATTCAGTGCTGGGAACAATGTGTCCCTCAATCTTGATCAAAATGGGGGGCTCTATCTTCTTAATTCCACTGGTTTAAAGATAAGAAGTTTTCCACTTAAGAATGGCCTTTCTATGTATCGTAGCTATCGCCTGACGATTGATGCTGATGGAATACTCCGGTTGTACTCCTACAGTTTGGTTAAGAATAATTCTTGGTCAATTGAGTGGTCACCAACTGATGGTAAATGTGCTCCTATTGGCCTTTGTGGCCTAAATTCTTACTGTGTTCTTGTGGATCAGGAATCTTCTTGTGTATGTCTCCCTGGTTTCGTTTTCATCGACGAGGGCCAAAAATATTTAGGCTGCAAGAGAAACTTGAGTACAATTGGTTGCAAAGGTGAGAATGAAACTTCATATTCTATTGTTGATGTCAATAACATAAATTGGGAAAGCACTCCATACTCTGTTCTATCATTGGATAAGACTGCTTGTAAAGAGGACTGTTTGATGGATTGTAACTGTGAAGCTGCGATATTTACGGACCAGCAGTGCAGAAAACAAAAGCTCCCTCTAAGATTTGGAAGAACTCCCCAACGCGCTGTGGTGACAACCTTTGTCAAAAAGGGTACTACTGATGAGAGTTCAGGTGTAAAATGGTTGAGCAAGGAAAGAAAAAATGTTGACAGTGTCAAATTTATCAGCAGCATTGCAACTTTAACTTTTTCACTAGTTATTATGGCAATTACAGGTGTTGTTATATATAGATATCGTGTTTGGGATTACCGAAAGGTTACAAATTCTGCTGGTGAAGGGTTAATTGAAGGTGTTACACTGCGGTCATATACATATTGTGAACTTGAAAAGGCAACCAAAGGCTTCACCAATCAAGTGGGAAAAGGAGCTTTTGGGACAGTTTTTAAAGGGGTGATTGGTGGGAGAGAAGTGGCAATCAAGCAACTAGAGACAGTGGTGGATGAAGGGGAGCGAGAGTTTCGTAATGAGATGAATGCAATTGGGAGAACTCACCACAAGAATCTAGTGAAATTGCTTGGCTACTGTCATGATGGAACAAACAAGCTTCTGGTTTACGAGCCAACTTGGGAAGAAAGAGTCAGTACAGCCCTCAATGTAGCTCAAGGTATACTATATCTACATGAAGAGTGTGAGACACAGATCATTCATTGTGACATCAAACCAAAAAATATACTGATGACTGAGCAGAAATGTGCAAAGCTTGCTGATTTCGGATTAGCCAAGCTGTTGAAAGCTGACCAATCCAGGACATATACTGGCTTCAGAGGAACCAGGGGTTATGTTGCACCTGAGTGGCACAGGAACATGTCGATAACAGTGAAAGCGGACGTGTACAGCTTCGGGATTGTATTGTTGGAGATCATATGCTGTCAAAGAGGTTCCACCATGGACATACCTGAGGATCTATTAACTCTTGAGAATTGGATGTACCATTGTTTGGAGGCCAATGAACTGGATAAGCTAGTGAAGGATGATGATGAGATTGACACGAGCAAACTACGGGAGATGGTTAAGCTTGGTCTTTGCTGCATCCAAGAGGAACCATCATTACGCCCTTTGATGACGAAGGTGGTACTAATGCTGGAAGGGATACTAGAGATACCATCCCCTCCAAATTCTTTTAGTTCCAGACATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

745

Amino Acids

83.38

Weight (kDa)

6.55

Isoelectric Point (pI)

29.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
S_locus_glycop	PF00954	234 - 299	3.1e-06	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	482 - 725	1.6e-34	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	483 - 723	2.1e-36	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001464)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g14250
malus_domestica	MD05G1020600.v1.1
prunus_persica	Prupe.8G024600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0276401 RchiOBHm_Chr6g0276411 RchiOBHm_Chr6g0276421 RchiOBHm_Chr6g0276441 RchiOBHm_Chr6g0276461 RchiOBHm_Chr6g0276511 RchiOBHm_Chr6g0276531 RchiOBHm_Chr6g0287831
rosa_laevigata	RLG00000013394 RLG00000013396
rosa_multiflora	Rmu_co8365989.1_g000001 Rmu_sc0003877.1_g000005 Rmu_sc0004126.1_g000003 Rmu_sc0004126.1_g000009 Rmu_sc0004126.1_g000010 Rmu_sc0004126.1_g000014 Rmu_sc0004126.1_g000016 Rmu_sc0004248.1_g000005 Rmu_sc0004248.1_g000009 Rmu_sc0004248.1_g000029 Rmu_sc0007724.1_g000004 Rmu_ssc0000059.1_g000026
rosa_roxburghii	Rroxscaffold_7G00180750 Rroxscaffold_7G00181160 Rroxscaffold_7G00192200 Rroxscaffold_7G00192230 Rroxscaffold_7G00192240
rosa_rugosa	Rorug06G0101300 Rorug06G0101500 Rorug06G0101600
rosa_samantha	Rh6AG212100 Rh6AG212200 Rh6AG301900 Rh6BG216400 Rh6BG216800 Rh6BG217000 Rh6BG217200 Rh6BG308000 Rh6CG218600 Rh6CG219000 Rh6CG219100 Rh6DG208400 Rh6DG208500 Rh6DG209100 Rh6DG300600
rosa_wichuraiana	Rw6G018510 Rw6G018530 Rw6G018540 Rw6G026080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	803, 2035
AccI	GTMKAC	1 cut(s)	1705
AccII	CGCG	1 cut(s)	1161
AciI	CCGC	3 cut(s)	242, 1399, 1922
AclWI	GGATC	2 cut(s)	867, 2007
AcsI	RAATTY	6 cut(s)	115, 335, 838, 1256, 1360, 2212
AcuI	CTGAAG	1 cut(s)	1843
AfaI	GTAC	7 cut(s)	749, 946, 1192, 1681, 1931, 2027, 2172
AfiI	CCNNNNNNNGG	2 cut(s)	803, 2035
AflII	CTTAAG	1 cut(s)	680
AflIII	ACRYGT	2 cut(s)	1902, 1926
AgsI	TTSAA	8 cut(s)	38, 260, 301, 334, 521, 1385, 1424, 1828
AhlI	ACTAGT	1 cut(s)	1291
AjiI	CACGTC	1 cut(s)	1927
AjnI	CCWGG	3 cut(s)	886, 1841, 1868
AjuI	GAANNNNNNNTTGG	2 cut(s)	320, 352
AleI	CACNNNNGTG	2 cut(s)	474, 1888
AloI	GAACNNNNNNTCC	2 cut(s)	590, 622
Alw21I	GWGCWC	2 cut(s)	295, 817
Alw26I	GTCTC	3 cut(s)	887, 1520, 1724
AlwI	GGATC	2 cut(s)	867, 2007
AlwNI	CAGNNNCTG	1 cut(s)	424
Ama87I	CYCGRG	1 cut(s)	577
AoxI	GGCC	6 cut(s)	362, 688, 823, 832, 910, 2040
ApeKI	GCWGC	8 cut(s)	5, 44, 47, 418, 927, 1091, 1266, 2124
ApoI	RAATTY	6 cut(s)	115, 335, 838, 1256, 1360, 2212
Asp700I	GAANNNNTTC	1 cut(s)	315
AspA2I	CCTAGG	1 cut(s)	70
AspLEI	GCGC	1 cut(s)	1163
AspS9I	GGNCC	3 cut(s)	362, 910, 1105
AsuC2I	CCSGG	3 cut(s)	415, 578, 579
AsuHPI	GGTGA	7 cut(s)	786, 974, 1180, 1382, 1435, 1501, 1580
AvaI	CYCGRG	1 cut(s)	577
AvaII	GGWCC	1 cut(s)	1105
AvrII	CCTAGG	1 cut(s)	70
AxyI	CCTNAGG	1 cut(s)	1995
BaeI	ACNNNNGTAYC	4 cut(s)	393, 393, 426, 426
BanII	GRGCYC	2 cut(s)	295, 636
BauI	CACGAG	1 cut(s)	2086
Bbv12I	GWGCWC	2 cut(s)	295, 817
BbvI	GCAGC	7 cut(s)	34, 56, 430, 914, 1078, 1278, 2111
BccI	CCATC	8 cut(s)	500, 725, 797, 1066, 1622, 2098, 2149, 2209
BciT130I	CCWGG	3 cut(s)	888, 1843, 1870
BciVI	GTATCC	2 cut(s)	421, 2181
BclI	TGATCA	2 cut(s)	535, 619
BcnI	CCSGG	3 cut(s)	415, 578, 579
BcoDI	GTCTC	3 cut(s)	887, 1520, 1724
BcuI	ACTAGT	1 cut(s)	1291
BfaI	CTAG	7 cut(s)	71, 161, 1292, 1523, 1601, 2060, 2192
BfmI	CTRYAG	2 cut(s)	165, 754
BfrI	CTTAAG	1 cut(s)	680
BfuI	GTATCC	2 cut(s)	421, 2181
BglI	GCCNNNNNGGC	1 cut(s)	831
BisI	GCNGC	9 cut(s)	6, 45, 48, 242, 419, 928, 1092, 1267, 2125
BlnI	CCTAGG	1 cut(s)	70
BlsI	GCNGC	9 cut(s)	7, 46, 49, 243, 420, 929, 1093, 1268, 2126
Bme1390I	CCNGG	6 cut(s)	415, 578, 579, 888, 1843, 1870
Bme18I	GGWCC	1 cut(s)	1105
BmeT110I	CYCGRG	1 cut(s)	577
BmgBI	CACGTC	1 cut(s)	1927
BmgT120I	GGNCC	3 cut(s)	362, 910, 1105
BmiI	GGNNCC	4 cut(s)	575, 1867, 1978, 2139
BmrFI	CCNGG	6 cut(s)	415, 578, 579, 888, 1843, 1870
BmsI	GCATC	4 cut(s)	180, 214, 715, 2136
BpuEI	CTTGAG	3 cut(s)	961, 1683, 2033
BpuMI	CCSGG	3 cut(s)	415, 578, 579
BsaJI	CCNNGG	6 cut(s)	70, 577, 578, 886, 1869, 1983
BsaWI	WCCGGW	1 cut(s)	741
BsaXI	ACNNNNNCTCC	4 cut(s)	1113, 1143, 1538, 1568
Bsc4I	CCNNNNNNNGG	2 cut(s)	803, 2035
Bse1I	ACTGG	3 cut(s)	658, 1858, 2055
Bse21I	CCTNAGG	1 cut(s)	1995
Bse3DI	GCAATG	1 cut(s)	1269
BseBI	CCWGG	3 cut(s)	888, 1843, 1870
BseDI	CCNNGG	6 cut(s)	70, 577, 578, 886, 1869, 1983
BseGI	GGATG	5 cut(s)	1543, 2028, 2074, 2127, 2201
BseLI	CCNNNNNNNGG	2 cut(s)	803, 2035
BseMI	GCAATG	1 cut(s)	1269
BseMII	CTCAG	4 cut(s)	308, 1770, 1878, 1986
BseNI	ACTGG	3 cut(s)	658, 1858, 2055
BseRI	GAGGAG	1 cut(s)	439
BseXI	GCAGC	7 cut(s)	34, 56, 430, 914, 1078, 1278, 2111
BseYI	CCCAGC	2 cut(s)	343, 593
BsgI	GTGCAG	1 cut(s)	1135
Bsh1236I	CGCG	1 cut(s)	1161
BshFI	GGCC	6 cut(s)	364, 690, 825, 834, 912, 2042
BsiHKAI	GWGCWC	2 cut(s)	295, 817
BsiHKCI	CYCGRG	1 cut(s)	577
BsiSI	CCGG	3 cut(s)	414, 578, 742
BslFI	GGGAC	4 cut(s)	287, 592, 595, 1486
BslI	CCNNNNNNNGG	2 cut(s)	803, 2035
BsmAI	GTCTC	3 cut(s)	887, 1520, 1724
BsmFI	GGGAC	4 cut(s)	287, 592, 595, 1486
BsmI	GAATGC	2 cut(s)	317, 1576
BsnI	GGCC	6 cut(s)	364, 690, 825, 834, 912, 2042
BsoBI	CYCGRG	1 cut(s)	577
Bsp1286I	GDGCHC	3 cut(s)	295, 636, 817
Bsp1407I	TGTACA	1 cut(s)	1929
Bsp143I	GATC	8 cut(s)	286, 356, 535, 619, 859, 1737, 1956, 1999
Bsp19I	CCATGG	1 cut(s)	1983
BspACI	CCGC	3 cut(s)	242, 1399, 1922
BspANI	GGCC	6 cut(s)	364, 690, 825, 834, 912, 2042
BspCNI	CTCAG	4 cut(s)	307, 1771, 1879, 1987
BspFNI	CGCG	1 cut(s)	1161
BspHI	TCATGA	1 cut(s)	1624
BspLI	GGNNCC	4 cut(s)	575, 1867, 1978, 2139
BspPI	GGATC	2 cut(s)	867, 2007
BspTI	CTTAAG	1 cut(s)	680
BsrDI	GCAATG	1 cut(s)	1269
BsrGI	TGTACA	1 cut(s)	1929
BsrI	ACTGG	3 cut(s)	658, 1858, 2055
BssECI	CCNNGG	6 cut(s)	70, 577, 578, 886, 1869, 1983
BssMI	GATC	8 cut(s)	286, 356, 535, 619, 859, 1737, 1956, 1999
BssNAI	GTATAC	1 cut(s)	1706
BssSI	CACGAG	1 cut(s)	2086
BssT1I	CCWWGG	2 cut(s)	70, 1983
Bst1107I	GTATAC	1 cut(s)	1706
Bst2BI	CACGAG	1 cut(s)	2086
Bst2UI	CCWGG	3 cut(s)	888, 1843, 1870
Bst6I	CTCTTC	1 cut(s)	1716
BstAFI	CTTAAG	1 cut(s)	680
BstAPI	GCANNNNNTGC	1 cut(s)	1799
BstAUI	TGTACA	1 cut(s)	1929
BstC8I	GCNNGC	2 cut(s)	349, 1800
BstDEI	CTNAG	5 cut(s)	294, 1136, 1779, 1887, 1995
BstDSI	CCRYGG	1 cut(s)	1983
BstEII	GGTNACC	1 cut(s)	792
BstF5I	GGATG	5 cut(s)	1543, 2028, 2074, 2127, 2201
BstFNI	CGCG	1 cut(s)	1161
BstHHI	GCGC	1 cut(s)	1163
BstKTI	GATC	8 cut(s)	289, 359, 538, 622, 862, 1740, 1959, 2002
BstMAI	GTCTC	3 cut(s)	887, 1520, 1724
BstMBI	GATC	8 cut(s)	286, 356, 535, 619, 859, 1737, 1956, 1999
BstMWI	GCNNNNNNNGC	2 cut(s)	831, 1799
BstNI	CCWGG	3 cut(s)	888, 1843, 1870
BstNSI	RCATGY	1 cut(s)	1906
BstPI	GGTNACC	1 cut(s)	792
BstSCI	CCNGG	6 cut(s)	413, 576, 577, 886, 1841, 1868
BstSFI	CTRYAG	2 cut(s)	165, 754
BstUI	CGCG	1 cut(s)	1161
BstV1I	GCAGC	7 cut(s)	34, 56, 430, 914, 1078, 1278, 2111
BstX2I	RGATCY	1 cut(s)	1999
BstXI	CCANNNNNNTGG	2 cut(s)	1453, 2050
BstYI	RGATCY	1 cut(s)	1999
BstZ17I	GTATAC	1 cut(s)	1706
Bsu36I	CCTNAGG	1 cut(s)	1995
BsuI	GTATCC	2 cut(s)	421, 2181
BsuRI	GGCC	6 cut(s)	364, 690, 825, 834, 912, 2042
BtgI	CCRYGG	1 cut(s)	1983
BtrI	CACGTC	1 cut(s)	1927
BtsCI	GGATG	5 cut(s)	1543, 2028, 2074, 2127, 2201
BtsI	GCAGTG	2 cut(s)	1118, 1394
BtsIMutI	CAGTG	8 cut(s)	283, 595, 651, 1118, 1255, 1394, 1536, 1920
Cac8I	GCNNGC	2 cut(s)	349, 1800
CaiI	CAGNNNCTG	1 cut(s)	424
CciI	TCATGA	1 cut(s)	1624
CfoI	GCGC	1 cut(s)	1163
Cfr13I	GGNCC	3 cut(s)	362, 910, 1105
Cfr9I	CCCGGG	1 cut(s)	577
CseI	GACGC	1 cut(s)	410
Csp6I	GTAC	7 cut(s)	748, 945, 1191, 1680, 1930, 2026, 2171
CviAII	CATG	7 cut(s)	369, 496, 1625, 1718, 1903, 1984, 2231
CviQI	GTAC	7 cut(s)	748, 945, 1191, 1680, 1930, 2026, 2171
DdeI	CTNAG	5 cut(s)	294, 1136, 1779, 1887, 1995
DpnI	GATC	8 cut(s)	288, 358, 537, 621, 861, 1739, 1958, 2001
DpnII	GATC	8 cut(s)	286, 356, 535, 619, 859, 1737, 1956, 1999
DraI	TTTAAA	3 cut(s)	487, 660, 1483
Eam1104I	CTCTTC	1 cut(s)	1716
EarI	CTCTTC	1 cut(s)	1716
Ecl136II	GAGCTC	1 cut(s)	293
Eco130I	CCWWGG	2 cut(s)	70, 1983
Eco24I	GRGCYC	2 cut(s)	295, 636
Eco32I	GATATC	1 cut(s)	1331
Eco47I	GGWCC	1 cut(s)	1105
Eco53kI	GAGCTC	1 cut(s)	293
Eco57I	CTGAAG	1 cut(s)	1843
Eco81I	CCTNAGG	1 cut(s)	1995
Eco88I	CYCGRG	1 cut(s)	577
Eco91I	GGTNACC	1 cut(s)	792
EcoICRI	GAGCTC	1 cut(s)	293
EcoO109I	RGGNCCY	1 cut(s)	362
EcoO65I	GGTNACC	1 cut(s)	792
EcoRI	GAATTC	1 cut(s)	115
EcoRII	CCWGG	3 cut(s)	886, 1841, 1868
EcoRV	GATATC	1 cut(s)	1331
EcoT14I	CCWWGG	2 cut(s)	70, 1983
EcoT38I	GRGCYC	2 cut(s)	295, 636
ErhI	CCWWGG	2 cut(s)	70, 1983
FaeI	CATG	7 cut(s)	372, 499, 1628, 1721, 1906, 1987, 2234
FalI	AAGNNNNNCTT	6 cut(s)	228, 260, 300, 332, 923, 955
FaqI	GGGAC	4 cut(s)	287, 592, 595, 1486
FatI	CATG	7 cut(s)	368, 495, 1624, 1717, 1902, 1983, 2230
FauNDI	CATATG	1 cut(s)	1961
FbaI	TGATCA	2 cut(s)	535, 619
FblI	GTMKAC	1 cut(s)	1705
Fnu4HI	GCNGC	9 cut(s)	6, 45, 48, 242, 419, 928, 1092, 1267, 2125
FokI	GGATG	5 cut(s)	1550, 2035, 2081, 2114, 2188
FriOI	GRGCYC	2 cut(s)	295, 636
Fsp4HI	GCNGC	9 cut(s)	6, 45, 48, 242, 419, 928, 1092, 1267, 2125
FspBI	CTAG	7 cut(s)	71, 161, 1292, 1523, 1601, 2060, 2192
GlaI	GCGC	1 cut(s)	1162
GluI	GCNGC	9 cut(s)	6, 45, 48, 242, 419, 928, 1092, 1267, 2125
GsaI	CCCAGC	2 cut(s)	347, 597
HaeIII	GGCC	6 cut(s)	364, 690, 825, 834, 912, 2042
HapII	CCGG	3 cut(s)	414, 578, 742
HgaI	GACGC	1 cut(s)	410
HhaI	GCGC	1 cut(s)	1163
Hin1II	CATG	7 cut(s)	372, 499, 1628, 1721, 1906, 1987, 2234
Hin6I	GCGC	1 cut(s)	1161
HinP1I	GCGC	1 cut(s)	1161
HincII	GTYRAC	1 cut(s)	1246
HindII	GTYRAC	1 cut(s)	1246
HindIII	AAGCTT	3 cut(s)	1640, 1796, 2111
HinfI	GANTC	5 cut(s)	376, 466, 866, 1597, 1674
HpaII	CCGG	3 cut(s)	414, 578, 742
HphI	GGTGA	7 cut(s)	786, 974, 1180, 1382, 1435, 1501, 1580
Hpy166II	GTNNAC	5 cut(s)	1246, 1418, 1651, 1706, 1930
Hpy188I	TCNGA	5 cut(s)	195, 381, 556, 1811, 1862
Hpy188III	TCNNGA	8 cut(s)	208, 221, 617, 863, 1625, 1939, 2012, 2226
Hpy8I	GTNNAC	5 cut(s)	1246, 1418, 1651, 1706, 1930
Hpy99I	CGWCG	1 cut(s)	908
HpyAV	CCTTC	8 cut(s)	32, 326, 1367, 1379, 1535, 2059, 2158, 2177
HpyCH4IV	ACGT	1 cut(s)	1926
HpyF10VI	GCNNNNNNNGC	2 cut(s)	831, 1799
HpyF3I	CTNAG	5 cut(s)	294, 1136, 1779, 1887, 1995
HpySE526I	ACGT	1 cut(s)	1926
Hsp92II	CATG	7 cut(s)	372, 499, 1628, 1721, 1906, 1987, 2234
HspAI	GCGC	1 cut(s)	1161
Ksp22I	TGATCA	2 cut(s)	535, 619
Kzo9I	GATC	8 cut(s)	286, 356, 535, 619, 859, 1737, 1956, 1999
LmnI	GCTCC	4 cut(s)	820, 1134, 1463, 1546
Lsp1109I	GCAGC	7 cut(s)	34, 56, 430, 914, 1078, 1278, 2111
LweI	GCATC	4 cut(s)	180, 214, 715, 2136
MaeI	CTAG	7 cut(s)	71, 161, 1292, 1523, 1601, 2060, 2192
MaeII	ACGT	1 cut(s)	1926
MaeIII	GTNAC	6 cut(s)	792, 1079, 1168, 1354, 1390, 1748
MalI	GATC	8 cut(s)	288, 358, 537, 621, 861, 1739, 1958, 2001
MboI	GATC	8 cut(s)	286, 356, 535, 619, 859, 1737, 1956, 1999
MfeI	CAATTG	4 cut(s)	260, 783, 948, 1575
MflI	RGATCY	1 cut(s)	1999
MhlI	GDGCHC	3 cut(s)	295, 636, 817
MlyI	GAGTC	1 cut(s)	1683
MmeI	TCCRAC	2 cut(s)	419, 1932
MroXI	GAANNNNTTC	1 cut(s)	315
MslI	CAYNNNNRTG	2 cut(s)	474, 1888
MspA1I	CMGCKG	1 cut(s)	47
MspCI	CTTAAG	1 cut(s)	680
MspI	CCGG	3 cut(s)	414, 578, 742
MspR9I	CCNGG	6 cut(s)	415, 578, 579, 888, 1843, 1870
MunI	CAATTG	4 cut(s)	260, 783, 948, 1575
Mva1269I	GAATGC	2 cut(s)	317, 1576
MvaI	CCWGG	3 cut(s)	888, 1843, 1870
MvnI	CGCG	1 cut(s)	1161
MwoI	GCNNNNNNNGC	2 cut(s)	831, 1799
NciI	CCSGG	3 cut(s)	415, 578, 579
NcoI	CCATGG	1 cut(s)	1983
NdeI	CATATG	1 cut(s)	1961
NdeII	GATC	8 cut(s)	286, 356, 535, 619, 859, 1737, 1956, 1999
NlaIII	CATG	7 cut(s)	372, 499, 1628, 1721, 1906, 1987, 2234
NlaIV	GGNNCC	4 cut(s)	575, 1867, 1978, 2139
NmuCI	GTSAC	3 cut(s)	792, 1168, 1748
NspI	RCATGY	1 cut(s)	1906
OliI	CACNNNNGTG	2 cut(s)	474, 1888
PagI	TCATGA	1 cut(s)	1624
PciI	ACATGT	1 cut(s)	1902
PcsI	WCGNNNNNNNCGW	1 cut(s)	900
PctI	GAATGC	2 cut(s)	317, 1576
PdmI	GAANNNNTTC	1 cut(s)	315
PfeI	GAWTC	4 cut(s)	376, 466, 866, 1597
PflFI	GACNNNGTC	1 cut(s)	1250
PflMI	CCANNNNNTGG	2 cut(s)	803, 2035
PfoI	TCCNGGA	1 cut(s)	1841
PkrI	GCNGC	9 cut(s)	7, 46, 49, 243, 420, 929, 1093, 1268, 2126
PleI	GAGTC	1 cut(s)	1682
PpsI	GAGTC	1 cut(s)	1682
PscI	ACATGT	1 cut(s)	1902
Psp124BI	GAGCTC	1 cut(s)	295
Psp6I	CCWGG	3 cut(s)	886, 1841, 1868
PspEI	GGTNACC	1 cut(s)	792
PspFI	CCCAGC	2 cut(s)	343, 593
PspGI	CCWGG	3 cut(s)	886, 1841, 1868
PspN4I	GGNNCC	4 cut(s)	575, 1867, 1978, 2139
PspPI	GGNCC	3 cut(s)	362, 910, 1105
PsrI	GAACNNNNNNTAC	2 cut(s)	2130, 2162
PstNI	CAGNNNCTG	1 cut(s)	424
PsuI	RGATCY	1 cut(s)	1999
PsyI	GACNNNGTC	1 cut(s)	1250
PvuII	CAGCTG	1 cut(s)	47
RsaI	GTAC	7 cut(s)	749, 946, 1192, 1681, 1931, 2027, 2172
RsaNI	GTAC	7 cut(s)	748, 945, 1191, 1680, 1930, 2026, 2171
RseI	CAYNNNNRTG	2 cut(s)	474, 1888
SacI	GAGCTC	1 cut(s)	295
SatI	GCNGC	9 cut(s)	6, 45, 48, 242, 419, 928, 1092, 1267, 2125
Sau3AI	GATC	8 cut(s)	286, 356, 535, 619, 859, 1737, 1956, 1999
Sau96I	GGNCC	3 cut(s)	362, 910, 1105
SchI	GAGTC	1 cut(s)	1683
ScrFI	CCNGG	6 cut(s)	415, 578, 579, 888, 1843, 1870
SduI	GDGCHC	3 cut(s)	295, 636, 817
SfaNI	GCATC	4 cut(s)	180, 214, 715, 2136
SfcI	CTRYAG	2 cut(s)	165, 754
SfiI	GGCCNNNNNGGCC	1 cut(s)	831
SinI	GGWCC	1 cut(s)	1105
SmaI	CCCGGG	1 cut(s)	579
SmiMI	CAYNNNNRTG	2 cut(s)	474, 1888
SmlI	CTYRAG	4 cut(s)	680, 940, 1698, 2012
SmoI	CTYRAG	4 cut(s)	680, 940, 1698, 2012
SpeI	ACTAGT	1 cut(s)	1291
SsiI	CCGC	3 cut(s)	242, 1399, 1922
SspI	AATATT	3 cut(s)	532, 563, 920
SspMI	CTAG	7 cut(s)	71, 161, 1292, 1523, 1601, 2060, 2192
SstI	GAGCTC	1 cut(s)	295
StyD4I	CCNGG	6 cut(s)	413, 576, 577, 886, 1841, 1868
StyI	CCWWGG	2 cut(s)	70, 1983
TaiI	ACGT	1 cut(s)	1929
TaqI	TCGA	5 cut(s)	113, 289, 355, 903, 1907
TatI	WGTACW	4 cut(s)	747, 944, 1679, 1929
TauI	GCSGC	1 cut(s)	244
TfiI	GAWTC	4 cut(s)	376, 466, 866, 1597
TscAI	CASTG	8 cut(s)	283, 595, 658, 1118, 1255, 1401, 1536, 1920
TseFI	GTSAC	3 cut(s)	792, 1168, 1748
TseI	GCWGC	8 cut(s)	5, 44, 47, 418, 927, 1091, 1266, 2124
Tsp45I	GTSAC	3 cut(s)	792, 1168, 1748
TspDTI	ATGAA	9 cut(s)	573, 889, 966, 984, 1554, 1583, 1733, 1734, 2061
TspGWI	ACGGA	1 cut(s)	1118
TspMI	CCCGGG	1 cut(s)	577
TspRI	CASTG	8 cut(s)	283, 595, 658, 1118, 1255, 1401, 1536, 1920
Tth111I	GACNNNGTC	1 cut(s)	1250
Van91I	CCANNNNNTGG	2 cut(s)	803, 2035
Vha464I	CTTAAG	1 cut(s)	680
VpaK11BI	GGWCC	1 cut(s)	1105
XapI	RAATTY	6 cut(s)	115, 335, 838, 1256, 1360, 2212
XceI	RCATGY	1 cut(s)	1906
XmaI	CCCGGG	1 cut(s)	577
XmaJI	CCTAGG	1 cut(s)	70
XmiI	GTMKAC	1 cut(s)	1705
XmnI	GAANNNNTTC	1 cut(s)	315
XspI	CTAG	7 cut(s)	71, 161, 1292, 1523, 1601, 2060, 2192

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.