Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0001464

Physical Location & Seq

Genomic Coordinates Forward (+)

30943357 .. 30948479

Gene Structure 5123 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013396

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2703 bp

ATGACTCAGGCCGCCCACCACGGTGTCGTCACCAGAGGAATTGACCTCGACGACTCGGTCCAGATTGGAGTCGACCTCGACGATTGGCTGGTCCTAGTCCAGTACCACTTCACCGCCGATCATAGCAACGACCACAACGCCGAATTTGAAGTCGACGATTTCTCCGTCAACGATGACGGCGGTTCCACTTCCATGTCCTCCTCTGCTGCAGCGATTCGTCGAACACCTCGAGCTACAGGTCCACTGGTAGCATCCGGAAACTCGATCTTATCCCACTCCAAAGAGGTGACTGACCTTCCGCAACATCACCGAGCAGATGATCCCCGCCGGGATCCAATGCTATTTTGTATAATAAGCAAGGGTCTCTACAGCATGAAAAACTCAACCATGGCTGCAGTTTTTCTTTTTCTTCTTCTTCTTCAAGTTGCAGCTGCTCAACAAGGGAATATCAGCCTAGGTGCTTCTCTACGTCCCAATAAAAACTCACATTGGTTATCGAATTCGGGTCGGTTTGCCTTTGGCTTCTACGGGCAAGGAAATGACCTTGCTGTAGGCATTTGGTTCGAGAAAACCAATCCGAAAACAATCATCTGGACAGCCAATCATGATGGTGTTAAACAAGAGCCACTTCCTAATGATGTTCAATTGACTGTGAGTGACAAAGGAGTTGAGCTCATTTCAACAAACAAGAATGTCTTCCTCATACGAATTTCAGATTCTTCCCAGCCTGCTGTCAGGGCCTCCATGCTTGATTCAGGTAACTTTGTCTTCTACAATTCTGATTCAAACATCATTTGGCAGTCTTTTGATGTTCCAACAGATACCATTGTATCCGGGCAGCATCTGTTGGCTGGAACAAAGCTCATCTCCTCCATCTCGAACACGAATCACGCAAGTGGAAGGTTTCAAGTGTTCATGAACAGTGATGGCAACCTGGTTCAGTTTCCAATTGATCCGTTGAGATATGGGCCTCAATATTCTTATTGGAGCTCTGGGACATTCGGAGCTGGGAACAATGTGTCCCTTAATCTTCATCAAAATGGGGGGCTCTATCTTCTTAATTCCACTGGTTTCAAGATAAAAAGTTTTCCTCTTCAGAATGGCCTTTCTATGAATCGTGGCTATCGTCTCACGATTGATGCTGATGGAATACTCCGGTTGTACTCCTACAGTTTGGTTCTGAATGATTCCTGGTCAATTGAGTGGTCACCAGATGTTGATAAGTGTGCTCCTCTTGGCCTCTGTGGCCTAAATTTTTATTGTGTTCTTGTGGATCAGGAACCTTCTTGTGTATGTCTCCCCAGTTTCGCTTTCATCGACAAGGGCCAAAGATATCTAGGCTGCAAGAGAAACTTGAGTACGGTTGGTTGCAAAGGTGGGAACGAAACTTCATATTCTATTGTTGATGTGGATAACATAGATTGGGAAAACACTACATACTCTATTCTATCAATGAATAAGACTGCTTGTAGAGAGGACTGTTTGATGGATTGCAACTGTGAAGTTGCGATATTTAGGGACCAGCAGTGCAGAAAAGAAAAGCTTCCTCTAAGATTTGGAAGAACTCCCAAAGCTGGTGTGGTGACAACCTTTGTCAAAAAGGGTGCTACTGATGAGAGTTCCAGTACAAAGAGGGGGAGCAAGGGAAGAAAAATTGTTGGCAGAGTCATATTTATCAGCAACATTGCAACTTTAACTCTTTCACTTGTTATTATGGCACTTACTGGTGTTGTTATATATAGATATCGTGTTTGGGATTACCGAAAAGTTACAAATTCAGCTGGTGAAGGGTTAATTGAAGGTGTTACACTGCGGTCATATACATATTGTGAACTTGAAAAGGCAACTAAAGGCTTCACCAATCAAGTGGGTAAAGGAGCTTTTGGGACAGTTTTTAAAGGGGTGATTGGTGGGAGAGAAGTGGCAATCAAGCAACTAGAGACAGTGGTGGATGAAGGAGAGCGAGAGTTTCGTAATGAGATGAATGCAATTGGGAGAACTCATCACAAGAATCTAGTGAAATTGCTTGGCTACTGTCATGATGGAACAAATAGGCTTCTGGTTTATGAGTACATGACCAACGGCTCACTTGCGAATTTTCTTTTCAAATCTTATGGTGGAAGGCCAACTTGGGAGGAAAGAGTCAGTATAACCCTCAATGTAGCTCAAGGTATACAATATCTACATGAAGAGTGTGAGACACAAATCATTCATTGTGACATCAAACCAGAAAATATACTGATGACTGAGCAGAAATGTGCAAAGCTTGCTGATTTCGGATTAGCCAAGCTGTTGAAAGCTGACCAATCCAGGACATATACTGGCTTCAGAGGAACCAGAGGTTATGTTGCACCTGAGTGGCACAGGTTCATGTCGATAACAGTGAAAGCGGATGTGTACAGCTTCGGGATTGTATTGTTGGAAATCATATGCTGTCAAAGAGTTTCGACCATGGACATCCCCAAGGATCAAGCAACTCTTGAGAATTGGTTGTACCATTGTTTGGAGGCCAATGAACTGGATAAGCTAGTGAAGGACGATGATAAGATTGACACGAATAAACTACGGGAGATGGTTAAGCTTGGTCTTTGCTGCATCCAGGAGGAACCATCATTGCGCCCTTCAATGAAGAAGGTGGTACTAATGCTGGAAGGGATACTGGAGATACCATCCCCTCCAAATTCTTTCAGTTCCAGACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

901

Amino Acids

100.11

Weight (kDa)

6.61

Isoelectric Point (pI)

26.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	195 - 283	8.9e-12	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	620 - 881	1.8e-48	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	621 - 880	1.1e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001464)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g14250
malus_domestica	MD05G1020600.v1.1
prunus_persica	Prupe.8G024600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0276401 RchiOBHm_Chr6g0276411 RchiOBHm_Chr6g0276421 RchiOBHm_Chr6g0276441 RchiOBHm_Chr6g0276461 RchiOBHm_Chr6g0276511 RchiOBHm_Chr6g0276531 RchiOBHm_Chr6g0287831
rosa_laevigata	RLG00000013394 RLG00000013396
rosa_multiflora	Rmu_co8365989.1_g000001 Rmu_sc0003877.1_g000005 Rmu_sc0004126.1_g000003 Rmu_sc0004126.1_g000009 Rmu_sc0004126.1_g000010 Rmu_sc0004126.1_g000014 Rmu_sc0004126.1_g000016 Rmu_sc0004248.1_g000005 Rmu_sc0004248.1_g000009 Rmu_sc0004248.1_g000029 Rmu_sc0007724.1_g000004 Rmu_ssc0000059.1_g000026
rosa_roxburghii	Rroxscaffold_7G00180750 Rroxscaffold_7G00181160 Rroxscaffold_7G00192200 Rroxscaffold_7G00192230 Rroxscaffold_7G00192240
rosa_rugosa	Rorug06G0101300 Rorug06G0101500 Rorug06G0101600
rosa_samantha	Rh6AG212100 Rh6AG212200 Rh6AG301900 Rh6BG216400 Rh6BG216800 Rh6BG217000 Rh6BG217200 Rh6BG308000 Rh6CG218600 Rh6CG219000 Rh6CG219100 Rh6DG208400 Rh6DG208500 Rh6DG209100 Rh6DG300600
rosa_wichuraiana	Rw6G018510 Rw6G018530 Rw6G018540 Rw6G026080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	56
AccB7I	CCANNNNNTGG	1 cut(s)	2503
AccI	GTMKAC	3 cut(s)	72, 153, 2173
AccIII	TCCGGA	1 cut(s)	254
AciI	CCGC	7 cut(s)	12, 114, 180, 299, 325, 1813, 2390
AclWI	GGATC	6 cut(s)	314, 326, 339, 947, 1281, 2475
AcsI	RAATTY	7 cut(s)	143, 499, 708, 1252, 1774, 2095, 2680
AcuI	CTGAAG	2 cut(s)	1079, 2311
AfaI	GTAC	8 cut(s)	104, 1163, 1360, 1627, 2072, 2399, 2495, 2640
AfiI	CCNNNNNNNGG	2 cut(s)	1574, 2503
AjnI	CCWGG	4 cut(s)	933, 1190, 2309, 2598
AjuI	GAANNNNNNNTTGG	2 cut(s)	2113, 2145
AleI	CACNNNNGTG	3 cut(s)	21, 894, 2356
AloI	GAACNNNNNNTCC	2 cut(s)	1004, 1036
Alw21I	GWGCWC	3 cut(s)	675, 992, 1231
Alw26I	GTCTC	5 cut(s)	368, 1133, 1301, 1934, 2192
AlwI	GGATC	6 cut(s)	314, 326, 339, 947, 1281, 2475
AlwNI	CAGNNNCTG	1 cut(s)	844
Ama87I	CYCGRG	1 cut(s)	228
Aor13HI	TCCGGA	1 cut(s)	254
AoxI	GGCC	9 cut(s)	9, 738, 968, 1102, 1237, 1246, 1324, 2123, 2508
ApeKI	GCWGC	8 cut(s)	206, 209, 392, 428, 431, 838, 1341, 2592
ApoI	RAATTY	7 cut(s)	143, 499, 708, 1252, 1774, 2095, 2680
ArsI	GACNNNNNNTTYG	2 cut(s)	135, 167
Asp700I	GAANNNNTTC	2 cut(s)	695, 1542
AspA2I	CCTAGG	1 cut(s)	454
AspLEI	GCGC	1 cut(s)	2619
AspS9I	GGNCC	7 cut(s)	58, 91, 239, 738, 968, 1324, 1519
AsuC2I	CCSGG	2 cut(s)	329, 835
AsuHPI	GGTGA	9 cut(s)	22, 103, 298, 299, 1200, 1594, 1796, 1849, 1915
AvaI	CYCGRG	1 cut(s)	228
AvaII	GGWCC	4 cut(s)	58, 91, 239, 1519
AvrII	CCTAGG	1 cut(s)	454
BaeI	ACNNNNGTAYC	4 cut(s)	813, 813, 846, 846
BamHI	GGATCC	1 cut(s)	331
BanII	GRGCYC	3 cut(s)	675, 992, 1050
BbsI	GAAGAC	2 cut(s)	688, 760
Bbv12I	GWGCWC	3 cut(s)	675, 992, 1231
BbvI	GCAGC	8 cut(s)	193, 221, 379, 418, 440, 850, 1328, 2579
BccI	CCATC	9 cut(s)	602, 881, 920, 1139, 1480, 2036, 2566, 2617, 2677
BceAI	ACGGC	2 cut(s)	193, 2098
BcgI	CGANNNNNNTGC	2 cut(s)	544, 578
BciT130I	CCWGG	4 cut(s)	935, 1192, 2311, 2600
BciVI	GTATCC	2 cut(s)	841, 2649
BcnI	CCSGG	2 cut(s)	329, 835
BcoDI	GTCTC	5 cut(s)	368, 1133, 1301, 1934, 2192
BfaI	CTAG	6 cut(s)	95, 455, 1337, 1937, 2015, 2528
BfmI	CTRYAG	6 cut(s)	207, 234, 367, 393, 549, 1168
BfuI	GTATCC	2 cut(s)	841, 2649
BglI	GCCNNNNNGGC	1 cut(s)	1245
BisI	GCNGC	9 cut(s)	12, 207, 210, 393, 429, 432, 839, 1342, 2593
BlnI	CCTAGG	1 cut(s)	454
BlsI	GCNGC	9 cut(s)	13, 208, 211, 394, 430, 433, 840, 1343, 2594
Bme1390I	CCNGG	6 cut(s)	329, 835, 935, 1192, 2311, 2600
Bme18I	GGWCC	4 cut(s)	58, 91, 239, 1519
BmeT110I	CYCGRG	1 cut(s)	228
BmgT120I	GGNCC	7 cut(s)	58, 91, 239, 738, 968, 1324, 1519
BmiI	GGNNCC	6 cut(s)	184, 333, 1281, 1520, 2335, 2607
BmrFI	CCNGG	6 cut(s)	329, 835, 935, 1192, 2311, 2600
BmrI	ACTGGG	1 cut(s)	1296
BmsI	GCATC	4 cut(s)	260, 850, 1129, 2604
BmuI	ACTGGG	1 cut(s)	1296
BpiI	GAAGAC	2 cut(s)	688, 760
BplI	GAGNNNNNCTC	4 cut(s)	60, 92, 657, 689
BpmI	CTGGAG	1 cut(s)	2681
BpuEI	CTTGAG	3 cut(s)	1375, 2151, 2501
BpuMI	CCSGG	2 cut(s)	329, 835
BsaI	GGTCTC	1 cut(s)	368
BsaJI	CCNNGG	5 cut(s)	19, 387, 454, 2451, 2463
BsaWI	WCCGGW	2 cut(s)	254, 1155
BsaXI	ACNNNNNCTCC	2 cut(s)	146, 176
Bsc4I	CCNNNNNNNGG	2 cut(s)	1574, 2503
Bse1I	ACTGG	9 cut(s)	100, 249, 1072, 1302, 1623, 1729, 2326, 2523, 2664
Bse3DI	GCAATG	2 cut(s)	1683, 2612
BseAI	TCCGGA	1 cut(s)	254
BseBI	CCWGG	4 cut(s)	935, 1192, 2311, 2600
BseDI	CCNNGG	5 cut(s)	19, 387, 454, 2451, 2463
BseGI	GGATG	6 cut(s)	251, 1957, 2398, 2457, 2595, 2669
BseLI	CCNNNNNNNGG	2 cut(s)	1574, 2503
BseMI	GCAATG	2 cut(s)	1683, 2612
BseMII	CTCAG	3 cut(s)	20, 2238, 2346
BseNI	ACTGG	9 cut(s)	100, 249, 1072, 1302, 1623, 1729, 2326, 2523, 2664
BseRI	GAGGAG	3 cut(s)	190, 859, 1221
BseXI	GCAGC	8 cut(s)	193, 221, 379, 418, 440, 850, 1328, 2579
BseYI	CCCAGC	2 cut(s)	723, 1007
BsgI	GTGCAG	1 cut(s)	1549
BshFI	GGCC	9 cut(s)	11, 740, 970, 1104, 1239, 1248, 1326, 2125, 2510
BsiHKAI	GWGCWC	3 cut(s)	675, 992, 1231
BsiHKCI	CYCGRG	1 cut(s)	228
BsiSI	CCGG	4 cut(s)	255, 328, 834, 1156
BslFI	GGGAC	5 cut(s)	456, 1006, 1009, 1532, 1900
BslI	CCNNNNNNNGG	2 cut(s)	1574, 2503
BsmAI	GTCTC	5 cut(s)	368, 1133, 1301, 1934, 2192
BsmBI	CGTCTC	1 cut(s)	1133
BsmFI	GGGAC	5 cut(s)	456, 1006, 1009, 1532, 1900
BsmI	GAATGC	1 cut(s)	1990
BsnI	GGCC	9 cut(s)	11, 740, 970, 1104, 1239, 1248, 1326, 2125, 2510
Bso31I	GGTCTC	1 cut(s)	368
BsoBI	CYCGRG	1 cut(s)	228
Bsp1286I	GDGCHC	4 cut(s)	675, 992, 1050, 1231
Bsp13I	TCCGGA	1 cut(s)	254
Bsp1407I	TGTACA	1 cut(s)	2397
Bsp143I	GATC	7 cut(s)	118, 264, 319, 331, 952, 1273, 2467
Bsp19I	CCATGG	2 cut(s)	387, 2451
BspACI	CCGC	7 cut(s)	12, 114, 180, 299, 325, 1813, 2390
BspANI	GGCC	9 cut(s)	11, 740, 970, 1104, 1239, 1248, 1326, 2125, 2510
BspCNI	CTCAG	3 cut(s)	19, 2239, 2347
BspEI	TCCGGA	1 cut(s)	254
BspHI	TCATGA	3 cut(s)	604, 915, 2038
BspLI	GGNNCC	6 cut(s)	184, 333, 1281, 1520, 2335, 2607
BspMAI	CTGCAG	2 cut(s)	211, 397
BspPI	GGATC	6 cut(s)	314, 326, 339, 947, 1281, 2475
BspTNI	GGTCTC	1 cut(s)	368
BsrDI	GCAATG	2 cut(s)	1683, 2612
BsrGI	TGTACA	1 cut(s)	2397
BsrI	ACTGG	9 cut(s)	100, 249, 1072, 1302, 1623, 1729, 2326, 2523, 2664
BssECI	CCNNGG	5 cut(s)	19, 387, 454, 2451, 2463
BssMI	GATC	7 cut(s)	118, 264, 319, 331, 952, 1273, 2467
BssNAI	GTATAC	1 cut(s)	2174
BssT1I	CCWWGG	4 cut(s)	387, 454, 2451, 2463
Bst1107I	GTATAC	1 cut(s)	2174
Bst2UI	CCWGG	4 cut(s)	935, 1192, 2311, 2600
Bst6I	CTCTTC	2 cut(s)	1098, 2184
BstAPI	GCANNNNNTGC	1 cut(s)	2267
BstAUI	TGTACA	1 cut(s)	2397
BstC8I	GCNNGC	2 cut(s)	729, 2268
BstDEI	CTNAG	4 cut(s)	6, 1550, 2247, 2355
BstDSI	CCRYGG	3 cut(s)	19, 387, 2451
BstEII	GGTNACC	1 cut(s)	1206
BstF5I	GGATG	6 cut(s)	251, 1957, 2398, 2457, 2595, 2669
BstHHI	GCGC	1 cut(s)	2619
BstKTI	GATC	7 cut(s)	121, 267, 322, 334, 955, 1276, 2470
BstMAI	GTCTC	5 cut(s)	368, 1133, 1301, 1934, 2192
BstMBI	GATC	7 cut(s)	118, 264, 319, 331, 952, 1273, 2467
BstMWI	GCNNNNNNNGC	3 cut(s)	737, 1245, 2267
BstNI	CCWGG	4 cut(s)	935, 1192, 2311, 2600
BstPI	GGTNACC	1 cut(s)	1206
BstSCI	CCNGG	6 cut(s)	327, 833, 933, 1190, 2309, 2598
BstSFI	CTRYAG	6 cut(s)	207, 234, 367, 393, 549, 1168
BstV1I	GCAGC	8 cut(s)	193, 221, 379, 418, 440, 850, 1328, 2579
BstV2I	GAAGAC	2 cut(s)	688, 760
BstX2I	RGATCY	1 cut(s)	331
BstXI	CCANNNNNNTGG	2 cut(s)	1867, 2518
BstYI	RGATCY	1 cut(s)	331
BstZ17I	GTATAC	1 cut(s)	2174
BsuI	GTATCC	2 cut(s)	841, 2649
BsuRI	GGCC	9 cut(s)	11, 740, 970, 1104, 1239, 1248, 1326, 2125, 2510
BtgI	CCRYGG	3 cut(s)	19, 387, 2451
BtsCI	GGATG	6 cut(s)	251, 1957, 2398, 2457, 2595, 2669
BtsI	GCAGTG	2 cut(s)	1532, 1808
BtsIMutI	CAGTG	7 cut(s)	242, 928, 1065, 1532, 1808, 1950, 2388
Cac8I	GCNNGC	2 cut(s)	729, 2268
CaiI	CAGNNNCTG	1 cut(s)	844
CciI	TCATGA	3 cut(s)	604, 915, 2038
CfoI	GCGC	1 cut(s)	2619
Cfr13I	GGNCC	7 cut(s)	58, 91, 239, 738, 968, 1324, 1519
CsiI	ACCWGGT	1 cut(s)	933
Csp6I	GTAC	8 cut(s)	103, 1162, 1359, 1626, 2071, 2398, 2494, 2639
CviQI	GTAC	8 cut(s)	103, 1162, 1359, 1626, 2071, 2398, 2494, 2639
DdeI	CTNAG	4 cut(s)	6, 1550, 2247, 2355
DpnI	GATC	7 cut(s)	120, 266, 321, 333, 954, 1275, 2469
DpnII	GATC	7 cut(s)	118, 264, 319, 331, 952, 1273, 2467
DraI	TTTAAA	1 cut(s)	1897
DrdI	GACNNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	56
Eam1104I	CTCTTC	2 cut(s)	1098, 2184
EarI	CTCTTC	2 cut(s)	1098, 2184
Ecl136II	GAGCTC	2 cut(s)	673, 990
Eco130I	CCWWGG	4 cut(s)	387, 454, 2451, 2463
Eco24I	GRGCYC	3 cut(s)	675, 992, 1050
Eco31I	GGTCTC	1 cut(s)	368
Eco32I	GATATC	2 cut(s)	1334, 1745
Eco47I	GGWCC	4 cut(s)	58, 91, 239, 1519
Eco53kI	GAGCTC	2 cut(s)	673, 990
Eco57I	CTGAAG	2 cut(s)	1079, 2311
Eco88I	CYCGRG	1 cut(s)	228
Eco91I	GGTNACC	1 cut(s)	1206
EcoICRI	GAGCTC	2 cut(s)	673, 990
EcoO109I	RGGNCCY	1 cut(s)	738
EcoO65I	GGTNACC	1 cut(s)	1206
EcoRI	GAATTC	1 cut(s)	499
EcoRII	CCWGG	4 cut(s)	933, 1190, 2309, 2598
EcoRV	GATATC	2 cut(s)	1334, 1745
EcoT14I	CCWWGG	4 cut(s)	387, 454, 2451, 2463
EcoT38I	GRGCYC	3 cut(s)	675, 992, 1050
ErhI	CCWWGG	4 cut(s)	387, 454, 2451, 2463
Esp3I	CGTCTC	1 cut(s)	1133
FaqI	GGGAC	5 cut(s)	456, 1006, 1009, 1532, 1900
FauI	CCCGC	1 cut(s)	332
FauNDI	CATATG	1 cut(s)	2429
FblI	GTMKAC	3 cut(s)	72, 153, 2173
Fnu4HI	GCNGC	9 cut(s)	12, 207, 210, 393, 429, 432, 839, 1342, 2593
FokI	GGATG	6 cut(s)	238, 1964, 2405, 2444, 2582, 2656
FriOI	GRGCYC	3 cut(s)	675, 992, 1050
Fsp4HI	GCNGC	9 cut(s)	12, 207, 210, 393, 429, 432, 839, 1342, 2593
FspBI	CTAG	6 cut(s)	95, 455, 1337, 1937, 2015, 2528
GlaI	GCGC	1 cut(s)	2618
GluI	GCNGC	9 cut(s)	12, 207, 210, 393, 429, 432, 839, 1342, 2593
GsaI	CCCAGC	2 cut(s)	727, 1011
GsuI	CTGGAG	1 cut(s)	2681
HaeIII	GGCC	9 cut(s)	11, 740, 970, 1104, 1239, 1248, 1326, 2125, 2510
HapII	CCGG	4 cut(s)	255, 328, 834, 1156
HhaI	GCGC	1 cut(s)	2619
Hin6I	GCGC	1 cut(s)	2617
HinP1I	GCGC	1 cut(s)	2617
HincII	GTYRAC	3 cut(s)	73, 154, 169
HindII	GTYRAC	3 cut(s)	73, 154, 169
HindIII	AAGCTT	3 cut(s)	1541, 2264, 2579
HpaII	CCGG	4 cut(s)	255, 328, 834, 1156
HphI	GGTGA	9 cut(s)	22, 103, 298, 299, 1200, 1594, 1796, 1849, 1915
Hpy166II	GTNNAC	7 cut(s)	73, 154, 169, 242, 1832, 2174, 2398
Hpy188I	TCNGA	8 cut(s)	579, 715, 781, 1004, 1098, 1182, 2279, 2330
Hpy8I	GTNNAC	7 cut(s)	73, 154, 169, 242, 1832, 2174, 2398
Hpy99I	CGWCG	4 cut(s)	53, 83, 158, 222
HpyCH4IV	ACGT	1 cut(s)	469
HpyF10VI	GCNNNNNNNGC	3 cut(s)	737, 1245, 2267
HpyF3I	CTNAG	4 cut(s)	6, 1550, 2247, 2355
HpySE526I	ACGT	1 cut(s)	469
HspAI	GCGC	1 cut(s)	2617
Kpn2I	TCCGGA	1 cut(s)	254
Kzo9I	GATC	7 cut(s)	118, 264, 319, 331, 952, 1273, 2467
LmnI	GCTCC	5 cut(s)	987, 1004, 1234, 1638, 1877
Lsp1109I	GCAGC	8 cut(s)	193, 221, 379, 418, 440, 850, 1328, 2579
LweI	GCATC	4 cut(s)	260, 850, 1129, 2604
MabI	ACCWGGT	1 cut(s)	933
MaeI	CTAG	6 cut(s)	95, 455, 1337, 1937, 2015, 2528
MaeII	ACGT	1 cut(s)	469
MaeIII	GTNAC	9 cut(s)	28, 286, 656, 758, 1206, 1582, 1768, 1804, 2216
MalI	GATC	7 cut(s)	120, 266, 321, 333, 954, 1275, 2469
MboI	GATC	7 cut(s)	118, 264, 319, 331, 952, 1273, 2467
MfeI	CAATTG	4 cut(s)	644, 948, 1197, 1989
MflI	RGATCY	1 cut(s)	331
MhlI	GDGCHC	4 cut(s)	675, 992, 1050, 1231
MlyI	GAGTC	4 cut(s)	47, 78, 1674, 2151
MmeI	TCCRAC	2 cut(s)	839, 2400
MroI	TCCGGA	1 cut(s)	254
MroXI	GAANNNNTTC	2 cut(s)	695, 1542
MseI	TTAA	7 cut(s)	615, 1026, 1059, 1694, 1793, 1896, 2577
MslI	CAYNNNNRTG	6 cut(s)	21, 191, 609, 894, 1038, 2356
MspA1I	CMGCKG	2 cut(s)	431, 1781
MspI	CCGG	4 cut(s)	255, 328, 834, 1156
MspR9I	CCNGG	6 cut(s)	329, 835, 935, 1192, 2311, 2600
MunI	CAATTG	4 cut(s)	644, 948, 1197, 1989
Mva1269I	GAATGC	1 cut(s)	1990
MvaI	CCWGG	4 cut(s)	935, 1192, 2311, 2600
MwoI	GCNNNNNNNGC	3 cut(s)	737, 1245, 2267
NciI	CCSGG	2 cut(s)	329, 835
NcoI	CCATGG	2 cut(s)	387, 2451
NdeI	CATATG	1 cut(s)	2429
NdeII	GATC	7 cut(s)	118, 264, 319, 331, 952, 1273, 2467
NlaIV	GGNNCC	6 cut(s)	184, 333, 1281, 1520, 2335, 2607
NmuCI	GTSAC	6 cut(s)	28, 286, 656, 1206, 1582, 2216
OliI	CACNNNNGTG	3 cut(s)	21, 894, 2356
PaeR7I	CTCGAG	1 cut(s)	228
PagI	TCATGA	3 cut(s)	604, 915, 2038
PcsI	WCGNNNNNNNCGW	5 cut(s)	78, 162, 226, 1123, 1314
PctI	GAATGC	1 cut(s)	1990
PdmI	GAANNNNTTC	2 cut(s)	695, 1542
PfeI	GAWTC	8 cut(s)	214, 716, 752, 782, 886, 1114, 1187, 2011
PflFI	GACNNNGTC	1 cut(s)	56
PflMI	CCANNNNNTGG	1 cut(s)	2503
PfoI	TCCNGGA	2 cut(s)	2309, 2598
PkrI	GCNGC	9 cut(s)	13, 208, 211, 394, 430, 433, 840, 1343, 2594
PleI	GAGTC	4 cut(s)	47, 77, 1673, 2150
PpsI	GAGTC	4 cut(s)	47, 77, 1673, 2150
Psp124BI	GAGCTC	2 cut(s)	675, 992
Psp6I	CCWGG	4 cut(s)	933, 1190, 2309, 2598
PspEI	GGTNACC	1 cut(s)	1206
PspFI	CCCAGC	2 cut(s)	723, 1007
PspGI	CCWGG	4 cut(s)	933, 1190, 2309, 2598
PspN4I	GGNNCC	6 cut(s)	184, 333, 1281, 1520, 2335, 2607
PspPI	GGNCC	7 cut(s)	58, 91, 239, 738, 968, 1324, 1519
PspXI	VCTCGAGB	1 cut(s)	228
PstI	CTGCAG	2 cut(s)	211, 397
PstNI	CAGNNNCTG	1 cut(s)	844
PsuI	RGATCY	1 cut(s)	331
PsyI	GACNNNGTC	1 cut(s)	56
PvuII	CAGCTG	2 cut(s)	431, 1781
RsaI	GTAC	8 cut(s)	104, 1163, 1360, 1627, 2072, 2399, 2495, 2640
RsaNI	GTAC	8 cut(s)	103, 1162, 1359, 1626, 2071, 2398, 2494, 2639
RseI	CAYNNNNRTG	6 cut(s)	21, 191, 609, 894, 1038, 2356
SacI	GAGCTC	2 cut(s)	675, 992
SalI	GTCGAC	2 cut(s)	71, 152
SaqAI	TTAA	7 cut(s)	615, 1026, 1059, 1694, 1793, 1896, 2577
SatI	GCNGC	9 cut(s)	12, 207, 210, 393, 429, 432, 839, 1342, 2593
Sau3AI	GATC	7 cut(s)	118, 264, 319, 331, 952, 1273, 2467
Sau96I	GGNCC	7 cut(s)	58, 91, 239, 738, 968, 1324, 1519
SchI	GAGTC	4 cut(s)	47, 78, 1674, 2151
ScrFI	CCNGG	6 cut(s)	329, 835, 935, 1192, 2311, 2600
SduI	GDGCHC	4 cut(s)	675, 992, 1050, 1231
SexAI	ACCWGGT	1 cut(s)	933
SfaNI	GCATC	4 cut(s)	260, 850, 1129, 2604
SfcI	CTRYAG	6 cut(s)	207, 234, 367, 393, 549, 1168
SfiI	GGCCNNNNNGGCC	1 cut(s)	1245
Sfr274I	CTCGAG	1 cut(s)	228
SinI	GGWCC	4 cut(s)	58, 91, 239, 1519
SlaI	CTCGAG	1 cut(s)	228
SmiMI	CAYNNNNRTG	6 cut(s)	21, 191, 609, 894, 1038, 2356
SmlI	CTYRAG	4 cut(s)	228, 1354, 2166, 2480
SmoI	CTYRAG	4 cut(s)	228, 1354, 2166, 2480
SsiI	CCGC	7 cut(s)	12, 114, 180, 299, 325, 1813, 2390
SspI	AATATT	1 cut(s)	977
SspMI	CTAG	6 cut(s)	95, 455, 1337, 1937, 2015, 2528
SstI	GAGCTC	2 cut(s)	675, 992
StyD4I	CCNGG	6 cut(s)	327, 833, 933, 1190, 2309, 2598
StyI	CCWWGG	4 cut(s)	387, 454, 2451, 2463
TaiI	ACGT	1 cut(s)	472
TaqII	GACCGA	1 cut(s)	46
TatI	WGTACW	4 cut(s)	1161, 1625, 2070, 2397
TauI	GCSGC	1 cut(s)	14
TfiI	GAWTC	8 cut(s)	214, 716, 752, 782, 886, 1114, 1187, 2011
Tru1I	TTAA	7 cut(s)	615, 1026, 1059, 1694, 1793, 1896, 2577
Tru9I	TTAA	7 cut(s)	615, 1026, 1059, 1694, 1793, 1896, 2577
TscAI	CASTG	7 cut(s)	249, 928, 1072, 1532, 1815, 1950, 2388
TseFI	GTSAC	6 cut(s)	28, 286, 656, 1206, 1582, 2216
TseI	GCWGC	8 cut(s)	206, 209, 392, 428, 431, 838, 1341, 2592
Tsp45I	GTSAC	6 cut(s)	28, 286, 656, 1206, 1582, 2216
TspGWI	ACGGA	2 cut(s)	154, 945
TspRI	CASTG	7 cut(s)	249, 928, 1072, 1532, 1815, 1950, 2388
Tth111I	GACNNNGTC	1 cut(s)	56
Van91I	CCANNNNNTGG	1 cut(s)	2503
VpaK11BI	GGWCC	4 cut(s)	58, 91, 239, 1519
XapI	RAATTY	7 cut(s)	143, 499, 708, 1252, 1774, 2095, 2680
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1576
XhoI	CTCGAG	1 cut(s)	228
XmaJI	CCTAGG	1 cut(s)	454
XmiI	GTMKAC	3 cut(s)	72, 153, 2173
XmnI	GAANNNNTTC	2 cut(s)	695, 1542
XspI	CTAG	6 cut(s)	95, 455, 1337, 1937, 2015, 2528

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.