Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0001464

Physical Location & Seq

Genomic Coordinates Forward (+)

30903443 .. 30905770

Gene Structure 2328 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013394

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGCTGCAGTTTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCAAGTTGCAGCTGCTCAACAAGGGAATATCAGCCTAGGTGCTTCTCTACGTCCCAATAACAACTCACATTGGTTATCGAATTCGGGTCGGTTTGCCTTTGGCTTCTACGGGCAAGGAAATGACCTTGCTGTAGGCATTTGGTTCGAGAAAACCAATCCGAAAACAATCATCTGGACAGCCAATCATGATGGTGTTAAACAAGAGCCACTTCCTAATGATGTTCAATTGACTGTGAGTGACAAAGGAGTTGAGCTCATTTCAACAAACAAGAATGTCTTCCTCATACGAATTTCAGATTCTTCCCAGCCTGCTGTCAGGGCCTCCATGCTTGATTCAGGTAACTTTGTCTTCTACAATTCTGATTCAAACATCATTTGGCAGTCTTTTGATGTTCCAACAGATACCATTGTATCCGGGCAGCATCTGTTGGCTGGAACAAAGCTCATCTCCTCCATCTCGAACACGAATCACGCAAGTGGAAGGTTTCAAGTGTTCATCCAGAGTGATGGCAACCTGGTTCAGTTTCCAATTGATCCGTTGAGATATGGTCCTCGATATTCTTATTGGAGCTCTGGGACATTCGGAGCTGGGAACAATGTGTCCCTTAATCTTGATCAAAATGGGGGGCTCTATCTTCTTAATTCCACTGGTTTCAAGATAAAAAGTTTTCCTCTTCAGAATGACCTTTCTATGAATCGTGGCTATCGTCTCACGATTGATGCTGATGGAATACTCCGGTTGTACTCCTACAGTTTGGTTCTGAATGATTCCTGGTCAATTGAGTGGTCACCAGATGTTGATAAGTGTGCTCCTCTTGGCCTCTGTGGCCTAAATTCTTATTGTGTTCTTGTGGATCAGGAACCTTCTTGTGTATGTCTCCCCAGTTTCGATTTCATCGACAAGGGCCAAAGATATCTAGGCTGCAAGAGAAACTTGAGTACAGTTGGTTGCAAAGGTGGGAACGAAACTTCGTATTCTATTGTTGATGTGGATAACATAGATTGGGAAAACACTACATACTCTATTCTATCATTGAATAAGACTGCTTGTAGAGAGGACTGTTTGATGGATTGCAACTGTGAAGCTGCGATATTTAGGGACCAGCAGTGCAGAAAAGAAAAGCTCCCTCTAAGATTTGGAAGAACTCCCAAAGCTGGTGTGGTGACAACCTTTGTCAAAAAGGGTGCTACTAATGAGAGTTCCAGTACAAAAAGGGGGAGCAAGGGAAGAAAAAATGTTGACAGAGTCATATTTATCAGCAGCATTGCAACTTTAACTTTTTCATTTGTTATTATGGCGATTACTGGTGTTGTTATATATAGATATCGTGTTTGGAATTACCGAAAGCTTACAAATTCTGCTGGTGAACGGTTGATTGAAGGTGTTACACTACGGTCATATACATATTGTGAACTTGAAAAGGCAACCAACGGCTTCACCAATCAAGTGGGTAAAGGAGCTTTTGGGACAGTTTTTAAAGGGGTGATTGGTGGGAAAGAAGTGGCAATCAAGCAACTAGAGACAGTGGTGGATGAAGGAGAGCGAGAGTTTCGTAATGAGATGAATGCAATTGGGAGAACTCATCACAAGAATCTAGTGAAATTGCTTGGCTACTGTCATGATGGAACAAACAGGCTTCTGGTTTATGAGTACATGACCAACGGCTCACTAGCAAAATTCTTTTTCAAATCTCATGGTGGAAGGCCAACTTGGGAGGAAAGAGTCAGCACAGCCCTCAATGTAGCTCAAGGTATACTATATCTACATGAAGAGTGTGAGACACAAATCATTCATTGTGACATCAAACCAGAAAATATACTGATGACTGAGCAGAAATGTGCAAAGCTTGCTGATTTCGGATTAGCCAAGCTGTTGAAAGCTGACCAATCCAGGACATATACTGGCTTCAGAGGAACCAGGGGTTATGTTGCACCTGAGTGGCATAGGAACTTATCAATAACAGTGAAAGCGGATGTGTACAGCTTCGGGATTGTATTGTTGGAGATCATATGCTGTCAGAGAAGTTCGACCATGGACATACCTGAGGATCAATTAACTCTTGAGAATTGGATGAACCATTGTTTGGAGGCCAATGAACTGGATAAGCTAGTGAAGGATGAAGATGAGATTGACACGAGTAAACTACGGGAGATGGTTAAGCTTGGTCTTTGCTGCATCCAGGAGGAGCCATCATTGCGCCCTTCGATGAAGAAGGTGGTACTAATGCTGGAAGGGATACTAGAGATACCATCCCCTCCAAATTTTTTCAGTTCTAGACATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

776

Amino Acids

86.61

Weight (kDa)

6.89

Isoelectric Point (pI)

27.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	69 - 157	7e-12	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	494 - 755	6.3e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	495 - 754	4.6e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001464)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g14250
malus_domestica	MD05G1020600.v1.1
prunus_persica	Prupe.8G024600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0276401 RchiOBHm_Chr6g0276411 RchiOBHm_Chr6g0276421 RchiOBHm_Chr6g0276441 RchiOBHm_Chr6g0276461 RchiOBHm_Chr6g0276511 RchiOBHm_Chr6g0276531 RchiOBHm_Chr6g0287831
rosa_laevigata	RLG00000013394 RLG00000013396
rosa_multiflora	Rmu_co8365989.1_g000001 Rmu_sc0003877.1_g000005 Rmu_sc0004126.1_g000003 Rmu_sc0004126.1_g000009 Rmu_sc0004126.1_g000010 Rmu_sc0004126.1_g000014 Rmu_sc0004126.1_g000016 Rmu_sc0004248.1_g000005 Rmu_sc0004248.1_g000009 Rmu_sc0004248.1_g000029 Rmu_sc0007724.1_g000004 Rmu_ssc0000059.1_g000026
rosa_roxburghii	Rroxscaffold_7G00180750 Rroxscaffold_7G00181160 Rroxscaffold_7G00192200 Rroxscaffold_7G00192230 Rroxscaffold_7G00192240
rosa_rugosa	Rorug06G0101300 Rorug06G0101500 Rorug06G0101600
rosa_samantha	Rh6AG212100 Rh6AG212200 Rh6AG301900 Rh6BG216400 Rh6BG216800 Rh6BG217000 Rh6BG217200 Rh6BG308000 Rh6CG218600 Rh6CG219000 Rh6CG219100 Rh6DG208400 Rh6DG208500 Rh6DG209100 Rh6DG300600
rosa_wichuraiana	Rw6G018510 Rw6G018530 Rw6G018540 Rw6G026080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2125
AccI	GTMKAC	1 cut(s)	1795
AciI	CCGC	1 cut(s)	2012
AclWI	GGATC	3 cut(s)	569, 903, 2097
AcsI	RAATTY	6 cut(s)	121, 330, 874, 1396, 1718, 2302
AcuI	CTGAAG	2 cut(s)	701, 1933
AfaI	GTAC	6 cut(s)	785, 982, 1249, 1694, 2021, 2262
AfiI	CCNNNNNNNGG	2 cut(s)	1196, 2125
AjnI	CCWGG	5 cut(s)	555, 812, 1931, 1958, 2220
AjuI	GAANNNNNNNTTGG	4 cut(s)	1735, 1767, 2108, 2140
AleI	CACNNNNGTG	2 cut(s)	516, 1978
AloI	GAACNNNNNNTCC	2 cut(s)	626, 658
Alw21I	GWGCWC	3 cut(s)	297, 614, 853
Alw26I	GTCTC	4 cut(s)	755, 923, 1556, 1814
AlwI	GGATC	3 cut(s)	569, 903, 2097
AlwNI	CAGNNNCTG	1 cut(s)	466
AoxI	GGCC	6 cut(s)	360, 859, 868, 946, 1745, 2130
ApeKI	GCWGC	8 cut(s)	5, 50, 53, 460, 963, 1127, 1302, 2214
ApoI	RAATTY	6 cut(s)	121, 330, 874, 1396, 1718, 2302
Asp700I	GAANNNNTTC	1 cut(s)	317
AspA2I	CCTAGG	1 cut(s)	76
AspLEI	GCGC	1 cut(s)	2241
AspS9I	GGNCC	4 cut(s)	360, 590, 946, 1141
AsuC2I	CCSGG	1 cut(s)	457
AsuHPI	GGTGA	5 cut(s)	822, 1216, 1418, 1471, 1537
AvaII	GGWCC	2 cut(s)	590, 1141
AvrII	CCTAGG	1 cut(s)	76
AxyI	CCTNAGG	1 cut(s)	2085
BaeI	ACNNNNGTAYC	4 cut(s)	435, 435, 468, 468
BanII	GRGCYC	3 cut(s)	297, 614, 672
BauI	CACGAG	1 cut(s)	2176
BbsI	GAAGAC	2 cut(s)	310, 382
Bbv12I	GWGCWC	3 cut(s)	297, 614, 853
BbvI	GCAGC	7 cut(s)	40, 62, 472, 950, 1114, 1314, 2201
BccI	CCATC	9 cut(s)	224, 503, 542, 761, 1102, 1658, 2188, 2239, 2299
BceAI	ACGGC	2 cut(s)	1489, 1720
BcgI	CGANNNNNNTGC	2 cut(s)	166, 200
BciT130I	CCWGG	5 cut(s)	557, 814, 1933, 1960, 2222
BciVI	GTATCC	2 cut(s)	463, 2271
BclI	TGATCA	1 cut(s)	655
BcnI	CCSGG	1 cut(s)	457
BcoDI	GTCTC	4 cut(s)	755, 923, 1556, 1814
BfaI	CTAG	8 cut(s)	77, 959, 1559, 1637, 1712, 2150, 2282, 2316
BfmI	CTRYAG	3 cut(s)	6, 171, 790
BfuI	GTATCC	2 cut(s)	463, 2271
BglI	GCCNNNNNGGC	1 cut(s)	867
BisI	GCNGC	8 cut(s)	6, 51, 54, 461, 964, 1128, 1303, 2215
BlnI	CCTAGG	1 cut(s)	76
BlsI	GCNGC	8 cut(s)	7, 52, 55, 462, 965, 1129, 1304, 2216
Bme1390I	CCNGG	6 cut(s)	457, 557, 814, 1933, 1960, 2222
Bme18I	GGWCC	2 cut(s)	590, 1141
BmgT120I	GGNCC	4 cut(s)	360, 590, 946, 1141
BmiI	GGNNCC	4 cut(s)	903, 1142, 1957, 2229
BmrFI	CCNGG	6 cut(s)	457, 557, 814, 1933, 1960, 2222
BmrI	ACTGGG	1 cut(s)	918
BmsI	GCATC	3 cut(s)	472, 751, 2226
BmuI	ACTGGG	1 cut(s)	918
BpiI	GAAGAC	2 cut(s)	310, 382
BplI	GAGNNNNNCTC	2 cut(s)	279, 311
BpuEI	CTTGAG	3 cut(s)	997, 1773, 2123
BpuMI	CCSGG	1 cut(s)	457
BsaJI	CCNNGG	3 cut(s)	76, 1959, 2073
BsaWI	WCCGGW	1 cut(s)	777
Bsc4I	CCNNNNNNNGG	2 cut(s)	1196, 2125
Bse1I	ACTGG	6 cut(s)	694, 924, 1245, 1351, 1948, 2145
Bse21I	CCTNAGG	1 cut(s)	2085
Bse3DI	GCAATG	2 cut(s)	1305, 2234
BseBI	CCWGG	5 cut(s)	557, 814, 1933, 1960, 2222
BseDI	CCNNGG	3 cut(s)	76, 1959, 2073
BseGI	GGATG	7 cut(s)	537, 1579, 2020, 2118, 2164, 2217, 2291
BseLI	CCNNNNNNNGG	2 cut(s)	1196, 2125
BseMI	GCAATG	2 cut(s)	1305, 2234
BseMII	CTCAG	3 cut(s)	1860, 1968, 2076
BseNI	ACTGG	6 cut(s)	694, 924, 1245, 1351, 1948, 2145
BseRI	GAGGAG	3 cut(s)	481, 843, 2240
BseXI	GCAGC	7 cut(s)	40, 62, 472, 950, 1114, 1314, 2201
BseYI	CCCAGC	2 cut(s)	345, 629
BsgI	GTGCAG	1 cut(s)	1171
BshFI	GGCC	6 cut(s)	362, 861, 870, 948, 1747, 2132
BsiHKAI	GWGCWC	3 cut(s)	297, 614, 853
BsiSI	CCGG	2 cut(s)	456, 778
BslFI	GGGAC	5 cut(s)	78, 628, 631, 1154, 1522
BslI	CCNNNNNNNGG	2 cut(s)	1196, 2125
BsmAI	GTCTC	4 cut(s)	755, 923, 1556, 1814
BsmBI	CGTCTC	1 cut(s)	755
BsmFI	GGGAC	5 cut(s)	78, 628, 631, 1154, 1522
BsmI	GAATGC	1 cut(s)	1612
BsnI	GGCC	6 cut(s)	362, 861, 870, 948, 1747, 2132
Bsp1286I	GDGCHC	4 cut(s)	297, 614, 672, 853
Bsp1407I	TGTACA	1 cut(s)	2019
Bsp143I	GATC	5 cut(s)	574, 655, 895, 2046, 2089
Bsp19I	CCATGG	1 cut(s)	2073
BspACI	CCGC	1 cut(s)	2012
BspANI	GGCC	6 cut(s)	362, 861, 870, 948, 1747, 2132
BspCNI	CTCAG	3 cut(s)	1861, 1969, 2077
BspHI	TCATGA	2 cut(s)	226, 1660
BspLI	GGNNCC	4 cut(s)	903, 1142, 1957, 2229
BspMAI	CTGCAG	1 cut(s)	10
BspPI	GGATC	3 cut(s)	569, 903, 2097
BsrDI	GCAATG	2 cut(s)	1305, 2234
BsrGI	TGTACA	1 cut(s)	2019
BsrI	ACTGG	6 cut(s)	694, 924, 1245, 1351, 1948, 2145
BssECI	CCNNGG	3 cut(s)	76, 1959, 2073
BssMI	GATC	5 cut(s)	574, 655, 895, 2046, 2089
BssNAI	GTATAC	1 cut(s)	1796
BssSI	CACGAG	1 cut(s)	2176
BssT1I	CCWWGG	2 cut(s)	76, 2073
Bst1107I	GTATAC	1 cut(s)	1796
Bst2BI	CACGAG	1 cut(s)	2176
Bst2UI	CCWGG	5 cut(s)	557, 814, 1933, 1960, 2222
Bst6I	CTCTTC	2 cut(s)	720, 1806
BstAPI	GCANNNNNTGC	1 cut(s)	1889
BstAUI	TGTACA	1 cut(s)	2019
BstC8I	GCNNGC	2 cut(s)	351, 1890
BstDEI	CTNAG	4 cut(s)	1172, 1869, 1977, 2085
BstDSI	CCRYGG	1 cut(s)	2073
BstEII	GGTNACC	1 cut(s)	828
BstF5I	GGATG	7 cut(s)	537, 1579, 2020, 2118, 2164, 2217, 2291
BstHHI	GCGC	1 cut(s)	2241
BstKTI	GATC	5 cut(s)	577, 658, 898, 2049, 2092
BstMAI	GTCTC	4 cut(s)	755, 923, 1556, 1814
BstMBI	GATC	5 cut(s)	574, 655, 895, 2046, 2089
BstMWI	GCNNNNNNNGC	4 cut(s)	359, 867, 1889, 2236
BstNI	CCWGG	5 cut(s)	557, 814, 1933, 1960, 2222
BstPI	GGTNACC	1 cut(s)	828
BstSCI	CCNGG	6 cut(s)	455, 555, 812, 1931, 1958, 2220
BstSFI	CTRYAG	3 cut(s)	6, 171, 790
BstV1I	GCAGC	7 cut(s)	40, 62, 472, 950, 1114, 1314, 2201
BstV2I	GAAGAC	2 cut(s)	310, 382
BstXI	CCANNNNNNTGG	3 cut(s)	548, 1489, 2140
BstZ17I	GTATAC	1 cut(s)	1796
Bsu36I	CCTNAGG	1 cut(s)	2085
BsuI	GTATCC	2 cut(s)	463, 2271
BsuRI	GGCC	6 cut(s)	362, 861, 870, 948, 1747, 2132
BtgI	CCRYGG	1 cut(s)	2073
BtsCI	GGATG	7 cut(s)	537, 1579, 2020, 2118, 2164, 2217, 2291
BtsI	GCAGTG	1 cut(s)	1154
BtsIMutI	CAGTG	4 cut(s)	687, 1154, 1572, 2010
Cac8I	GCNNGC	2 cut(s)	351, 1890
CaiI	CAGNNNCTG	1 cut(s)	466
CciI	TCATGA	2 cut(s)	226, 1660
CfoI	GCGC	1 cut(s)	2241
Cfr13I	GGNCC	4 cut(s)	360, 590, 946, 1141
CsiI	ACCWGGT	1 cut(s)	555
Csp6I	GTAC	6 cut(s)	784, 981, 1248, 1693, 2020, 2261
CviAII	CATG	8 cut(s)	227, 367, 1661, 1696, 1736, 1808, 2074, 2321
CviQI	GTAC	6 cut(s)	784, 981, 1248, 1693, 2020, 2261
DdeI	CTNAG	4 cut(s)	1172, 1869, 1977, 2085
DpnI	GATC	5 cut(s)	576, 657, 897, 2048, 2091
DpnII	GATC	5 cut(s)	574, 655, 895, 2046, 2089
DraI	TTTAAA	1 cut(s)	1519
Eam1104I	CTCTTC	2 cut(s)	720, 1806
EarI	CTCTTC	2 cut(s)	720, 1806
Ecl136II	GAGCTC	2 cut(s)	295, 612
Eco130I	CCWWGG	2 cut(s)	76, 2073
Eco24I	GRGCYC	3 cut(s)	297, 614, 672
Eco32I	GATATC	2 cut(s)	956, 1367
Eco47I	GGWCC	2 cut(s)	590, 1141
Eco53kI	GAGCTC	2 cut(s)	295, 612
Eco57I	CTGAAG	2 cut(s)	701, 1933
Eco81I	CCTNAGG	1 cut(s)	2085
Eco91I	GGTNACC	1 cut(s)	828
EcoICRI	GAGCTC	2 cut(s)	295, 612
EcoO109I	RGGNCCY	1 cut(s)	360
EcoO65I	GGTNACC	1 cut(s)	828
EcoRI	GAATTC	1 cut(s)	121
EcoRII	CCWGG	5 cut(s)	555, 812, 1931, 1958, 2220
EcoRV	GATATC	2 cut(s)	956, 1367
EcoT14I	CCWWGG	2 cut(s)	76, 2073
EcoT38I	GRGCYC	3 cut(s)	297, 614, 672
ErhI	CCWWGG	2 cut(s)	76, 2073
Esp3I	CGTCTC	1 cut(s)	755
FaeI	CATG	8 cut(s)	230, 370, 1664, 1699, 1739, 1811, 2077, 2324
FalI	AAGNNNNNCTT	8 cut(s)	234, 266, 302, 334, 959, 991, 1735, 1767
FaqI	GGGAC	5 cut(s)	78, 628, 631, 1154, 1522
FatI	CATG	8 cut(s)	226, 366, 1660, 1695, 1735, 1807, 2073, 2320
FauNDI	CATATG	1 cut(s)	2051
FbaI	TGATCA	1 cut(s)	655
FblI	GTMKAC	1 cut(s)	1795
Fnu4HI	GCNGC	8 cut(s)	6, 51, 54, 461, 964, 1128, 1303, 2215
FokI	GGATG	7 cut(s)	524, 1586, 2027, 2125, 2171, 2204, 2278
FriOI	GRGCYC	3 cut(s)	297, 614, 672
Fsp4HI	GCNGC	8 cut(s)	6, 51, 54, 461, 964, 1128, 1303, 2215
FspBI	CTAG	8 cut(s)	77, 959, 1559, 1637, 1712, 2150, 2282, 2316
GlaI	GCGC	1 cut(s)	2240
GluI	GCNGC	8 cut(s)	6, 51, 54, 461, 964, 1128, 1303, 2215
GsaI	CCCAGC	2 cut(s)	349, 633
HaeIII	GGCC	6 cut(s)	362, 861, 870, 948, 1747, 2132
HapII	CCGG	2 cut(s)	456, 778
HhaI	GCGC	1 cut(s)	2241
Hin1II	CATG	8 cut(s)	230, 370, 1664, 1699, 1739, 1811, 2077, 2324
Hin6I	GCGC	1 cut(s)	2239
HinP1I	GCGC	1 cut(s)	2239
HincII	GTYRAC	1 cut(s)	1282
HindII	GTYRAC	1 cut(s)	1282
HindIII	AAGCTT	3 cut(s)	1388, 1886, 2201
HinfI	GANTC	9 cut(s)	338, 374, 404, 508, 736, 809, 1287, 1633, 1764
HpaII	CCGG	2 cut(s)	456, 778
HphI	GGTGA	5 cut(s)	822, 1216, 1418, 1471, 1537
Hpy166II	GTNNAC	6 cut(s)	1282, 1409, 1454, 1796, 2020, 2183
Hpy188I	TCNGA	9 cut(s)	201, 337, 403, 626, 720, 804, 1901, 1952, 2061
Hpy8I	GTNNAC	6 cut(s)	1282, 1409, 1454, 1796, 2020, 2183
HpyAV	CCTTC	9 cut(s)	516, 915, 1415, 1571, 1737, 2149, 2248, 2253, 2267
HpyCH4IV	ACGT	1 cut(s)	91
HpyF10VI	GCNNNNNNNGC	4 cut(s)	359, 867, 1889, 2236
HpyF3I	CTNAG	4 cut(s)	1172, 1869, 1977, 2085
HpySE526I	ACGT	1 cut(s)	91
Hsp92II	CATG	8 cut(s)	230, 370, 1664, 1699, 1739, 1811, 2077, 2324
HspAI	GCGC	1 cut(s)	2239
Ksp22I	TGATCA	1 cut(s)	655
Kzo9I	GATC	5 cut(s)	574, 655, 895, 2046, 2089
LmnI	GCTCC	7 cut(s)	609, 626, 856, 1170, 1260, 1499, 2227
Lsp1109I	GCAGC	7 cut(s)	40, 62, 472, 950, 1114, 1314, 2201
LweI	GCATC	3 cut(s)	472, 751, 2226
MabI	ACCWGGT	1 cut(s)	555
MaeI	CTAG	8 cut(s)	77, 959, 1559, 1637, 1712, 2150, 2282, 2316
MaeII	ACGT	1 cut(s)	91
MaeIII	GTNAC	6 cut(s)	278, 380, 828, 1204, 1426, 1838
MalI	GATC	5 cut(s)	576, 657, 897, 2048, 2091
MboI	GATC	5 cut(s)	574, 655, 895, 2046, 2089
MfeI	CAATTG	4 cut(s)	266, 570, 819, 1611
MhlI	GDGCHC	4 cut(s)	297, 614, 672, 853
MlyI	GAGTC	2 cut(s)	1296, 1773
MmeI	TCCRAC	2 cut(s)	461, 2022
MroXI	GAANNNNTTC	1 cut(s)	317
MseI	TTAA	7 cut(s)	237, 648, 681, 1316, 1518, 2096, 2199
MslI	CAYNNNNRTG	3 cut(s)	231, 516, 1978
MspA1I	CMGCKG	1 cut(s)	53
MspI	CCGG	2 cut(s)	456, 778
MspR9I	CCNGG	6 cut(s)	457, 557, 814, 1933, 1960, 2222
MunI	CAATTG	4 cut(s)	266, 570, 819, 1611
Mva1269I	GAATGC	1 cut(s)	1612
MvaI	CCWGG	5 cut(s)	557, 814, 1933, 1960, 2222
MwoI	GCNNNNNNNGC	4 cut(s)	359, 867, 1889, 2236
NciI	CCSGG	1 cut(s)	457
NcoI	CCATGG	1 cut(s)	2073
NdeI	CATATG	1 cut(s)	2051
NdeII	GATC	5 cut(s)	574, 655, 895, 2046, 2089
NlaIII	CATG	8 cut(s)	230, 370, 1664, 1699, 1739, 1811, 2077, 2324
NlaIV	GGNNCC	4 cut(s)	903, 1142, 1957, 2229
NmuCI	GTSAC	4 cut(s)	278, 828, 1204, 1838
OliI	CACNNNNGTG	2 cut(s)	516, 1978
PagI	TCATGA	2 cut(s)	226, 1660
PcsI	WCGNNNNNNNCGW	2 cut(s)	745, 936
PctI	GAATGC	1 cut(s)	1612
PdmI	GAANNNNTTC	1 cut(s)	317
PfeI	GAWTC	7 cut(s)	338, 374, 404, 508, 736, 809, 1633
PflFI	GACNNNGTC	1 cut(s)	1286
PflMI	CCANNNNNTGG	1 cut(s)	2125
PfoI	TCCNGGA	2 cut(s)	1931, 2220
PkrI	GCNGC	8 cut(s)	7, 52, 55, 462, 965, 1129, 1304, 2216
PleI	GAGTC	2 cut(s)	1295, 1772
PpsI	GAGTC	2 cut(s)	1295, 1772
Psp124BI	GAGCTC	2 cut(s)	297, 614
Psp6I	CCWGG	5 cut(s)	555, 812, 1931, 1958, 2220
PspEI	GGTNACC	1 cut(s)	828
PspFI	CCCAGC	2 cut(s)	345, 629
PspGI	CCWGG	5 cut(s)	555, 812, 1931, 1958, 2220
PspN4I	GGNNCC	4 cut(s)	903, 1142, 1957, 2229
PspPI	GGNCC	4 cut(s)	360, 590, 946, 1141
PstI	CTGCAG	1 cut(s)	10
PstNI	CAGNNNCTG	1 cut(s)	466
PsyI	GACNNNGTC	1 cut(s)	1286
PvuII	CAGCTG	1 cut(s)	53
RsaI	GTAC	6 cut(s)	785, 982, 1249, 1694, 2021, 2262
RsaNI	GTAC	6 cut(s)	784, 981, 1248, 1693, 2020, 2261
RseI	CAYNNNNRTG	3 cut(s)	231, 516, 1978
SacI	GAGCTC	2 cut(s)	297, 614
SaqAI	TTAA	7 cut(s)	237, 648, 681, 1316, 1518, 2096, 2199
SatI	GCNGC	8 cut(s)	6, 51, 54, 461, 964, 1128, 1303, 2215
Sau3AI	GATC	5 cut(s)	574, 655, 895, 2046, 2089
Sau96I	GGNCC	4 cut(s)	360, 590, 946, 1141
SchI	GAGTC	2 cut(s)	1296, 1773
ScrFI	CCNGG	6 cut(s)	457, 557, 814, 1933, 1960, 2222
SduI	GDGCHC	4 cut(s)	297, 614, 672, 853
SexAI	ACCWGGT	1 cut(s)	555
SfaNI	GCATC	3 cut(s)	472, 751, 2226
SfcI	CTRYAG	3 cut(s)	6, 171, 790
SfiI	GGCCNNNNNGGCC	1 cut(s)	867
SinI	GGWCC	2 cut(s)	590, 1141
SmiMI	CAYNNNNRTG	3 cut(s)	231, 516, 1978
SmlI	CTYRAG	3 cut(s)	976, 1788, 2102
SmoI	CTYRAG	3 cut(s)	976, 1788, 2102
SsiI	CCGC	1 cut(s)	2012
SspMI	CTAG	8 cut(s)	77, 959, 1559, 1637, 1712, 2150, 2282, 2316
SstI	GAGCTC	2 cut(s)	297, 614
StyD4I	CCNGG	6 cut(s)	455, 555, 812, 1931, 1958, 2220
StyI	CCWWGG	2 cut(s)	76, 2073
TaiI	ACGT	1 cut(s)	94
TaqI	TCGA	8 cut(s)	119, 186, 500, 595, 930, 939, 2069, 2246
TatI	WGTACW	5 cut(s)	783, 980, 1247, 1692, 2019
TfiI	GAWTC	7 cut(s)	338, 374, 404, 508, 736, 809, 1633
Tru1I	TTAA	7 cut(s)	237, 648, 681, 1316, 1518, 2096, 2199
Tru9I	TTAA	7 cut(s)	237, 648, 681, 1316, 1518, 2096, 2199
TscAI	CASTG	4 cut(s)	694, 1154, 1572, 2010
TseFI	GTSAC	4 cut(s)	278, 828, 1204, 1838
TseI	GCWGC	8 cut(s)	5, 50, 53, 460, 963, 1127, 1302, 2214
Tsp45I	GTSAC	4 cut(s)	278, 828, 1204, 1838
TspGWI	ACGGA	1 cut(s)	567
TspRI	CASTG	4 cut(s)	694, 1154, 1572, 2010
Tth111I	GACNNNGTC	1 cut(s)	1286
Van91I	CCANNNNNTGG	1 cut(s)	2125
VpaK11BI	GGWCC	2 cut(s)	590, 1141
XapI	RAATTY	6 cut(s)	121, 330, 874, 1396, 1718, 2302
XbaI	TCTAGA	1 cut(s)	2315
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1198
XmaJI	CCTAGG	1 cut(s)	76
XmiI	GTMKAC	1 cut(s)	1795
XmnI	GAANNNNTTC	1 cut(s)	317
XspI	CTAG	8 cut(s)	77, 959, 1559, 1637, 1712, 2150, 2282, 2316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.