Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001464

Physical Location & Seq

Genomic Coordinates Reverse (-)

38586554 .. 38588860

Gene Structure 2307 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24808

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGCTGCAATTTTTCTTCTTCTTCAAGTTGCAACTGCTCAGCAAGGGAATATCAGCCTAGGTGCTTCTCTATATCCCCAAAACAACTCATATTGGTTATCGAATTCTGGTCAGTTTGCTTTTGGCTTCTACAGGCAAGGAAACGACCTTGCTGTAGGCATCTGGTTCGAGAAAACCAATCCGAAAACAATCATCTGGACAGCAAATCGTGATGCTGTTAAACAAGAGCCACTTCCTAATGATGTTAAATTGACTGTGAGTGACAAAGGAGTTAAGCTCATTTCAACAAACAAGAATGCCTTCCTTTCAAATTCTTTCCAGCCTGCTGTCAGGGCCTCCATGCTTGATTCAGGTAACTTTGTCCTCTACAATTCTGATTCAAACATCATTTGGCAGACTTTTGATGTTCCTACAGATACCATTGTATCCGGGCAGTGTCTGTTGGCTGGAAAAAAGCTCATCTCCTCCATCTCGAACACGAATCACTCAAGTGGAAGGTTTCAAGTGATCATGCAGAGAGATGGCAACCTGGTTCAGTATCCAAATATTGGTCCATTTACATTGAGTCCTAGAAAATATTCGTATTGGAGCACTAGGACATTCAGAGCTGGGAACAATGTGTCCCTCAATCTTGATCAAAATGGAGGGCTCTATCTTCTTAATTCCACCGGCTTCAAGATAAAAAGTTTTCCTCTTAAGAATAGCCTTTCTATGAATCGTGGCTATCGTCTCCCGATTGATGCTGATGGAATACTCCGGTTGTACTCCAACAGTTTGGTTCTGAATGATTCCTGGTCAATTGAGTGGTCACCAGCAGTTGGTAAGTGTGCTCCTCTTGGCCTCTGTGGCCTAAATTCTTATTGTGTTCTTGTGGAACAGGAACCTTCTTGTGTATGTCTCCCTGGTTTCGTTTTCATCAACGAGGGCAAAAGATATTTAGGCTGCAAGAGAAACTTGAGTACAGTTGTTTGCAAAGGTGAGAATGAAACTTCATATTCTATTGTTGATGTGGATAACATAGATTGGGAAAACACTCCGTACTCTAATTTATCATTGGATAAGACTGCTTGTAAAGAGGACTGTTTGAGGGATTGCGACTGTGAAGCTGCGATATTTAGGGACCAGCAGTGCGGAAAACAAAAGCTCCCTCTAAGATTTGGAAGAACTCGCAAACCTGGTGTGGTGACAACCTTTGTCAAAAAGGATACTACTGATGAGAGTTTTGATACAAAAAGGAGGAGCAAGGGGAGAAAAAATGTTGACAGAGTCATATTTATCAGCAGCATTGCAACTTTAACTTTTTCACTTGTTATTATGGCGATTACTGGTGTTGTTATATATAGATATCGTGTTTGGAATTACCGAAAGCTTACAAATTCAGCTGGTGGAGGACTGGTTGAAGGTGTTACACTGCAGTCATATACATATTGTGAACTTGAAAAGGCAACCAAAGGCTTCACCAATCAAGTGGGAAAAGGAGCTTTTGGGACAGTTTTTAAAGGGGTGATTGGTGGGAGAGAAGTGGCAATCAAGCAACTAGAGACAGTGGTGGACGAAGGAGAGCGAGAGTTTCGTAATGAGATGAATGCAATTGGGAGAACTCATCACAAGAATCTAGTGAAATTGCTTGGATACTGTCATGATGGAACAAATAGGCTTCTGGTTTATGAGTACATGAACAACGGCTCACTTGCGCATTTCTTTTTCAAATCTTATGGTGGAAGGCCAACTTGGGAGGAAAGAGTCAGTGTAGCCCTCAATGTAGCTCAAGGTATACTATATCTCCATGAAGAGTGTGAGACACAAATCATTCACTGTGACATCAAACCAGAAAATATACTGATGACCGAGCAGAAATGTGCAAAGCTTGCTGATTTTGGATTAGCCAAGCTGTTGAAAGCTGACCAATCCAAGACATATACTGGCTTCAGAGGAACCAGGGGTTATGTTGCACCTGAGTGGCACAGGAACATGTCGATAACAGTGAAAGCGGACGTGTACAGCTTCGGGATTGTATTGTTGGAGATCATATGCTGTCAAAGAGGTTCCACCATGGACATACCTGAGGATCTATTAACTCTTGAGAATTGGATGTACCATTGTTTGGAGGCCAATGAACTGGATAAGCTAGTGAAGGATGATGATGAGATTGATACGAGCAAACTACGGGAGATGGTTAAGCTTGGTCTTTGCTGCATCCAGGAGGAGCCATCATTGCGCCCTTCGATGAAGAAGGTGGTACTAATGCTGGAAGGGATACTAGAGATACCATCTCCTCCAAATTCTTTCAGTTCCAGACATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

768

Amino Acids

86.07

Weight (kDa)

8.44

Isoelectric Point (pI)

29.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	63 - 148	1.8e-11	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	487 - 748	2.6e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	488 - 747	1.6e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001464)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g14250
malus_domestica	MD05G1020600.v1.1
prunus_persica	Prupe.8G024600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0276401 RchiOBHm_Chr6g0276411 RchiOBHm_Chr6g0276421 RchiOBHm_Chr6g0276441 RchiOBHm_Chr6g0276461 RchiOBHm_Chr6g0276511 RchiOBHm_Chr6g0276531 RchiOBHm_Chr6g0287831
rosa_laevigata	RLG00000013394 RLG00000013396
rosa_multiflora	Rmu_co8365989.1_g000001 Rmu_sc0003877.1_g000005 Rmu_sc0004126.1_g000003 Rmu_sc0004126.1_g000009 Rmu_sc0004126.1_g000010 Rmu_sc0004126.1_g000014 Rmu_sc0004126.1_g000016 Rmu_sc0004248.1_g000005 Rmu_sc0004248.1_g000009 Rmu_sc0004248.1_g000029 Rmu_sc0007724.1_g000004 Rmu_ssc0000059.1_g000026
rosa_roxburghii	Rroxscaffold_7G00180750 Rroxscaffold_7G00181160 Rroxscaffold_7G00192200 Rroxscaffold_7G00192230 Rroxscaffold_7G00192240
rosa_rugosa	Rorug06G0101300 Rorug06G0101500 Rorug06G0101600
rosa_samantha	Rh6AG212100 Rh6AG212200 Rh6AG301900 Rh6BG216400 Rh6BG216800 Rh6BG217000 Rh6BG217200 Rh6BG308000 Rh6CG218600 Rh6CG219000 Rh6CG219100 Rh6DG208400 Rh6DG208500 Rh6DG209100 Rh6DG300600
rosa_wichuraiana	Rw6G018510 Rw6G018530 Rw6G018540 Rw6G026080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1695
AccB7I	CCANNNNNTGG	3 cut(s)	548, 818, 2104
AccI	GTMKAC	1 cut(s)	1774
AciI	CCGC	2 cut(s)	1131, 1991
AclWI	GGATC	1 cut(s)	2076
AcsI	RAATTY	5 cut(s)	103, 310, 853, 1375, 2281
AcuI	CTGAAG	1 cut(s)	1912
AfaI	GTAC	7 cut(s)	764, 961, 1040, 1673, 2000, 2096, 2241
AfiI	CCNNNNNNNGG	3 cut(s)	548, 818, 2104
AflII	CTTAAG	1 cut(s)	695
AflIII	ACRYGT	2 cut(s)	1971, 1995
AjiI	CACGTC	1 cut(s)	1996
AjnI	CCWGG	6 cut(s)	528, 791, 901, 1174, 1937, 2199
AjuI	GAANNNNNNNTTGG	2 cut(s)	1714, 1746
AleI	CACNNNNGTG	2 cut(s)	489, 1957
AloI	GAACNNNNNNTCC	2 cut(s)	605, 637
Alw21I	GWGCWC	2 cut(s)	593, 832
Alw26I	GTCTC	4 cut(s)	734, 902, 1535, 1793
AlwI	GGATC	1 cut(s)	2076
AlwNI	CAGNNNCTG	1 cut(s)	439
AoxI	GGCC	5 cut(s)	333, 838, 847, 1724, 2109
ApeKI	GCWGC	5 cut(s)	5, 942, 1106, 1281, 2193
ApoI	RAATTY	5 cut(s)	103, 310, 853, 1375, 2281
Asp700I	GAANNNNTTC	2 cut(s)	299, 577
AspA2I	CCTAGG	1 cut(s)	58
AspLEI	GCGC	2 cut(s)	1696, 2220
AspS9I	GGNCC	3 cut(s)	333, 551, 1120
AsuC2I	CCSGG	1 cut(s)	430
AsuHPI	GGTGA	5 cut(s)	801, 989, 1195, 1450, 1516
AvaII	GGWCC	2 cut(s)	551, 1120
AvrII	CCTAGG	1 cut(s)	58
AxyI	CCTNAGG	1 cut(s)	2064
BaeI	ACNNNNGTAYC	4 cut(s)	408, 408, 441, 441
BanII	GRGCYC	1 cut(s)	651
Bbv12I	GWGCWC	2 cut(s)	593, 832
BbvI	GCAGC	4 cut(s)	929, 1093, 1293, 2180
BccI	CCATC	7 cut(s)	476, 515, 740, 1637, 2167, 2218, 2278
BceAI	ACGGC	1 cut(s)	1699
BcgI	CGANNNNNNTGC	2 cut(s)	148, 182
BciT130I	CCWGG	6 cut(s)	530, 793, 903, 1176, 1939, 2201
BciVI	GTATCC	5 cut(s)	436, 549, 1198, 1625, 2250
BclI	TGATCA	2 cut(s)	507, 634
BcnI	CCSGG	1 cut(s)	430
BcoDI	GTCTC	4 cut(s)	734, 902, 1535, 1793
BfaI	CTAG	7 cut(s)	59, 570, 594, 1538, 1616, 2129, 2261
BfmI	CTRYAG	4 cut(s)	130, 153, 411, 1412
BfrI	CTTAAG	1 cut(s)	695
BfuI	GTATCC	5 cut(s)	436, 549, 1198, 1625, 2250
BglI	GCCNNNNNGGC	1 cut(s)	846
BisI	GCNGC	5 cut(s)	6, 943, 1107, 1282, 2194
BlnI	CCTAGG	1 cut(s)	58
BlpI	GCTNAGC	1 cut(s)	39
BlsI	GCNGC	5 cut(s)	7, 944, 1108, 1283, 2195
Bme1390I	CCNGG	7 cut(s)	430, 530, 793, 903, 1176, 1939, 2201
Bme18I	GGWCC	2 cut(s)	551, 1120
BmgBI	CACGTC	1 cut(s)	1996
BmgT120I	GGNCC	3 cut(s)	333, 551, 1120
BmiI	GGNNCC	5 cut(s)	882, 1121, 1936, 2047, 2208
BmrFI	CCNGG	7 cut(s)	430, 530, 793, 903, 1176, 1939, 2201
BmsI	GCATC	4 cut(s)	168, 202, 730, 2205
BplI	GAGNNNNNCTC	2 cut(s)	261, 293
Bpu1102I	GCTNAGC	1 cut(s)	39
BpuEI	CTTGAG	4 cut(s)	472, 976, 1752, 2102
BpuMI	CCSGG	1 cut(s)	430
BsaJI	CCNNGG	4 cut(s)	58, 901, 1938, 2052
BsaWI	WCCGGW	1 cut(s)	756
BsaXI	ACNNNNNCTCC	6 cut(s)	1128, 1158, 1380, 1410, 1767, 1797
Bsc4I	CCNNNNNNNGG	3 cut(s)	548, 818, 2104
Bse118I	RCCGGY	1 cut(s)	668
Bse1I	ACTGG	4 cut(s)	1330, 1398, 1927, 2124
Bse21I	CCTNAGG	1 cut(s)	2064
Bse3DI	GCAATG	2 cut(s)	1284, 2213
BseBI	CCWGG	6 cut(s)	530, 793, 903, 1176, 1939, 2201
BseDI	CCNNGG	4 cut(s)	58, 901, 1938, 2052
BseGI	GGATG	3 cut(s)	2097, 2143, 2196
BseLI	CCNNNNNNNGG	3 cut(s)	548, 818, 2104
BseMI	GCAATG	2 cut(s)	1284, 2213
BseMII	CTCAG	3 cut(s)	53, 1947, 2055
BseNI	ACTGG	4 cut(s)	1330, 1398, 1927, 2124
BseRI	GAGGAG	5 cut(s)	454, 822, 1252, 2219, 2265
BseXI	GCAGC	4 cut(s)	929, 1093, 1293, 2180
BseYI	CCCAGC	1 cut(s)	608
BshFI	GGCC	5 cut(s)	335, 840, 849, 1726, 2111
BsiHKAI	GWGCWC	2 cut(s)	593, 832
BsiSI	CCGG	3 cut(s)	429, 669, 757
BslFI	GGGAC	3 cut(s)	607, 1133, 1501
BslI	CCNNNNNNNGG	3 cut(s)	548, 818, 2104
BsmAI	GTCTC	4 cut(s)	734, 902, 1535, 1793
BsmBI	CGTCTC	1 cut(s)	734
BsmFI	GGGAC	3 cut(s)	607, 1133, 1501
BsmI	GAATGC	2 cut(s)	301, 1591
BsnI	GGCC	5 cut(s)	335, 840, 849, 1726, 2111
Bsp1286I	GDGCHC	3 cut(s)	593, 651, 832
Bsp1407I	TGTACA	1 cut(s)	1998
Bsp143I	GATC	4 cut(s)	507, 634, 2025, 2068
Bsp1720I	GCTNAGC	1 cut(s)	39
Bsp19I	CCATGG	1 cut(s)	2052
BspACI	CCGC	2 cut(s)	1131, 1991
BspANI	GGCC	5 cut(s)	335, 840, 849, 1726, 2111
BspCNI	CTCAG	3 cut(s)	52, 1948, 2056
BspHI	TCATGA	1 cut(s)	1639
BspLI	GGNNCC	5 cut(s)	882, 1121, 1936, 2047, 2208
BspMAI	CTGCAG	1 cut(s)	1416
BspPI	GGATC	1 cut(s)	2076
BspTI	CTTAAG	1 cut(s)	695
BsrDI	GCAATG	2 cut(s)	1284, 2213
BsrFI	RCCGGY	1 cut(s)	668
BsrGI	TGTACA	1 cut(s)	1998
BsrI	ACTGG	4 cut(s)	1330, 1398, 1927, 2124
BssAI	RCCGGY	1 cut(s)	668
BssECI	CCNNGG	4 cut(s)	58, 901, 1938, 2052
BssMI	GATC	4 cut(s)	507, 634, 2025, 2068
BssNAI	GTATAC	1 cut(s)	1775
BssT1I	CCWWGG	2 cut(s)	58, 2052
Bst1107I	GTATAC	1 cut(s)	1775
Bst2UI	CCWGG	6 cut(s)	530, 793, 903, 1176, 1939, 2201
Bst6I	CTCTTC	1 cut(s)	1785
BstAFI	CTTAAG	1 cut(s)	695
BstAPI	GCANNNNNTGC	1 cut(s)	1868
BstAUI	TGTACA	1 cut(s)	1998
BstC8I	GCNNGC	2 cut(s)	324, 1869
BstDEI	CTNAG	4 cut(s)	39, 1151, 1956, 2064
BstDSI	CCRYGG	1 cut(s)	2052
BstEII	GGTNACC	1 cut(s)	807
BstF5I	GGATG	3 cut(s)	2097, 2143, 2196
BstHHI	GCGC	2 cut(s)	1696, 2220
BstKTI	GATC	4 cut(s)	510, 637, 2028, 2071
BstMAI	GTCTC	4 cut(s)	734, 902, 1535, 1793
BstMBI	GATC	4 cut(s)	507, 634, 2025, 2068
BstMWI	GCNNNNNNNGC	4 cut(s)	332, 846, 1868, 2215
BstNI	CCWGG	6 cut(s)	530, 793, 903, 1176, 1939, 2201
BstNSI	RCATGY	1 cut(s)	1975
BstPI	GGTNACC	1 cut(s)	807
BstSCI	CCNGG	7 cut(s)	428, 528, 791, 901, 1174, 1937, 2199
BstSFI	CTRYAG	4 cut(s)	130, 153, 411, 1412
BstV1I	GCAGC	4 cut(s)	929, 1093, 1293, 2180
BstX2I	RGATCY	1 cut(s)	2068
BstXI	CCANNNNNNTGG	3 cut(s)	775, 1468, 2119
BstYI	RGATCY	1 cut(s)	2068
BstZ17I	GTATAC	1 cut(s)	1775
Bsu36I	CCTNAGG	1 cut(s)	2064
BsuI	GTATCC	5 cut(s)	436, 549, 1198, 1625, 2250
BsuRI	GGCC	5 cut(s)	335, 840, 849, 1726, 2111
BtgI	CCRYGG	1 cut(s)	2052
BtrI	CACGTC	1 cut(s)	1996
BtsCI	GGATG	3 cut(s)	2097, 2143, 2196
BtsI	GCAGTG	3 cut(s)	440, 1133, 1409
BtsIMutI	CAGTG	7 cut(s)	440, 1133, 1409, 1551, 1753, 1813, 1989
Cac8I	GCNNGC	2 cut(s)	324, 1869
CaiI	CAGNNNCTG	1 cut(s)	439
CciI	TCATGA	1 cut(s)	1639
CfoI	GCGC	2 cut(s)	1696, 2220
Cfr10I	RCCGGY	1 cut(s)	668
Cfr13I	GGNCC	3 cut(s)	333, 551, 1120
CsiI	ACCWGGT	2 cut(s)	528, 1174
Csp6I	GTAC	7 cut(s)	763, 960, 1039, 1672, 1999, 2095, 2240
CviAII	CATG	8 cut(s)	340, 511, 1640, 1675, 1787, 1972, 2053, 2300
CviQI	GTAC	7 cut(s)	763, 960, 1039, 1672, 1999, 2095, 2240
DdeI	CTNAG	4 cut(s)	39, 1151, 1956, 2064
DpnI	GATC	4 cut(s)	509, 636, 2027, 2070
DpnII	GATC	4 cut(s)	507, 634, 2025, 2068
DraI	TTTAAA	1 cut(s)	1498
Eam1104I	CTCTTC	1 cut(s)	1785
EarI	CTCTTC	1 cut(s)	1785
Eco130I	CCWWGG	2 cut(s)	58, 2052
Eco24I	GRGCYC	1 cut(s)	651
Eco32I	GATATC	1 cut(s)	1346
Eco47I	GGWCC	2 cut(s)	551, 1120
Eco57I	CTGAAG	1 cut(s)	1912
Eco81I	CCTNAGG	1 cut(s)	2064
Eco91I	GGTNACC	1 cut(s)	807
EcoO109I	RGGNCCY	1 cut(s)	333
EcoO65I	GGTNACC	1 cut(s)	807
EcoRI	GAATTC	1 cut(s)	103
EcoRII	CCWGG	6 cut(s)	528, 791, 901, 1174, 1937, 2199
EcoRV	GATATC	1 cut(s)	1346
EcoT14I	CCWWGG	2 cut(s)	58, 2052
EcoT38I	GRGCYC	1 cut(s)	651
ErhI	CCWWGG	2 cut(s)	58, 2052
Esp3I	CGTCTC	1 cut(s)	734
FaeI	CATG	8 cut(s)	343, 514, 1643, 1678, 1790, 1975, 2056, 2303
FalI	AAGNNNNNCTT	8 cut(s)	216, 248, 284, 316, 938, 970, 1714, 1746
FaqI	GGGAC	3 cut(s)	607, 1133, 1501
FatI	CATG	8 cut(s)	339, 510, 1639, 1674, 1786, 1971, 2052, 2299
FauNDI	CATATG	1 cut(s)	2030
FbaI	TGATCA	2 cut(s)	507, 634
FblI	GTMKAC	1 cut(s)	1774
Fnu4HI	GCNGC	5 cut(s)	6, 943, 1107, 1282, 2194
FokI	GGATG	3 cut(s)	2104, 2150, 2183
FriOI	GRGCYC	1 cut(s)	651
Fsp4HI	GCNGC	5 cut(s)	6, 943, 1107, 1282, 2194
FspBI	CTAG	7 cut(s)	59, 570, 594, 1538, 1616, 2129, 2261
FspI	TGCGCA	1 cut(s)	1695
GlaI	GCGC	2 cut(s)	1695, 2219
GluI	GCNGC	5 cut(s)	6, 943, 1107, 1282, 2194
GsaI	CCCAGC	1 cut(s)	612
HaeIII	GGCC	5 cut(s)	335, 840, 849, 1726, 2111
HapII	CCGG	3 cut(s)	429, 669, 757
HhaI	GCGC	2 cut(s)	1696, 2220
Hin1II	CATG	8 cut(s)	343, 514, 1643, 1678, 1790, 1975, 2056, 2303
Hin6I	GCGC	2 cut(s)	1694, 2218
HinP1I	GCGC	2 cut(s)	1694, 2218
HincII	GTYRAC	1 cut(s)	1261
HindII	GTYRAC	1 cut(s)	1261
HindIII	AAGCTT	3 cut(s)	1367, 1865, 2180
HinfI	GANTC	9 cut(s)	347, 377, 481, 565, 715, 788, 1266, 1612, 1743
HpaII	CCGG	3 cut(s)	429, 669, 757
HphI	GGTGA	5 cut(s)	801, 989, 1195, 1450, 1516
Hpy166II	GTNNAC	5 cut(s)	1261, 1433, 1552, 1775, 1999
Hpy188I	TCNGA	5 cut(s)	183, 376, 605, 783, 1931
Hpy8I	GTNNAC	5 cut(s)	1261, 1433, 1552, 1775, 1999
HpyCH4IV	ACGT	1 cut(s)	1995
HpyF10VI	GCNNNNNNNGC	4 cut(s)	332, 846, 1868, 2215
HpyF3I	CTNAG	4 cut(s)	39, 1151, 1956, 2064
HpySE526I	ACGT	1 cut(s)	1995
Hsp92II	CATG	8 cut(s)	343, 514, 1643, 1678, 1790, 1975, 2056, 2303
HspAI	GCGC	2 cut(s)	1694, 2218
Ksp22I	TGATCA	2 cut(s)	507, 634
Kzo9I	GATC	4 cut(s)	507, 634, 2025, 2068
LmnI	GCTCC	6 cut(s)	588, 835, 1149, 1239, 1478, 2206
Lsp1109I	GCAGC	4 cut(s)	929, 1093, 1293, 2180
LweI	GCATC	4 cut(s)	168, 202, 730, 2205
MabI	ACCWGGT	2 cut(s)	528, 1174
MaeI	CTAG	7 cut(s)	59, 570, 594, 1538, 1616, 2129, 2261
MaeII	ACGT	1 cut(s)	1995
MaeIII	GTNAC	6 cut(s)	260, 353, 807, 1183, 1405, 1817
MalI	GATC	4 cut(s)	509, 636, 2027, 2070
MboI	GATC	4 cut(s)	507, 634, 2025, 2068
MboII	GAAGA	7 cut(s)	8, 11, 14, 647, 1173, 1802, 2242
MfeI	CAATTG	2 cut(s)	798, 1590
MflI	RGATCY	1 cut(s)	2068
MhlI	GDGCHC	3 cut(s)	593, 651, 832
MlyI	GAGTC	3 cut(s)	574, 1275, 1752
MmeI	TCCRAC	2 cut(s)	792, 2001
MroXI	GAANNNNTTC	2 cut(s)	299, 577
MseI	TTAA	9 cut(s)	219, 246, 273, 660, 696, 1295, 1497, 2075, 2178
MslI	CAYNNNNRTG	2 cut(s)	489, 1957
MspA1I	CMGCKG	1 cut(s)	1382
MspCI	CTTAAG	1 cut(s)	695
MspI	CCGG	3 cut(s)	429, 669, 757
MspR9I	CCNGG	7 cut(s)	430, 530, 793, 903, 1176, 1939, 2201
MunI	CAATTG	2 cut(s)	798, 1590
Mva1269I	GAATGC	2 cut(s)	301, 1591
MvaI	CCWGG	6 cut(s)	530, 793, 903, 1176, 1939, 2201
MwoI	GCNNNNNNNGC	4 cut(s)	332, 846, 1868, 2215
NciI	CCSGG	1 cut(s)	430
NcoI	CCATGG	1 cut(s)	2052
NdeI	CATATG	1 cut(s)	2030
NdeII	GATC	4 cut(s)	507, 634, 2025, 2068
NlaIII	CATG	8 cut(s)	343, 514, 1643, 1678, 1790, 1975, 2056, 2303
NlaIV	GGNNCC	5 cut(s)	882, 1121, 1936, 2047, 2208
NmuCI	GTSAC	4 cut(s)	260, 807, 1183, 1817
NsbI	TGCGCA	1 cut(s)	1695
NspI	RCATGY	1 cut(s)	1975
OliI	CACNNNNGTG	2 cut(s)	489, 1957
PagI	TCATGA	1 cut(s)	1639
PciI	ACATGT	1 cut(s)	1971
PcsI	WCGNNNNNNNCGW	1 cut(s)	724
PctI	GAATGC	2 cut(s)	301, 1591
PdmI	GAANNNNTTC	2 cut(s)	299, 577
PfeI	GAWTC	6 cut(s)	347, 377, 481, 715, 788, 1612
PflFI	GACNNNGTC	1 cut(s)	1265
PflMI	CCANNNNNTGG	3 cut(s)	548, 818, 2104
PfoI	TCCNGGA	1 cut(s)	2199
PkrI	GCNGC	5 cut(s)	7, 944, 1108, 1283, 2195
PleI	GAGTC	3 cut(s)	573, 1274, 1751
PpsI	GAGTC	3 cut(s)	573, 1274, 1751
PscI	ACATGT	1 cut(s)	1971
Psp6I	CCWGG	6 cut(s)	528, 791, 901, 1174, 1937, 2199
PspEI	GGTNACC	1 cut(s)	807
PspFI	CCCAGC	1 cut(s)	608
PspGI	CCWGG	6 cut(s)	528, 791, 901, 1174, 1937, 2199
PspN4I	GGNNCC	5 cut(s)	882, 1121, 1936, 2047, 2208
PspPI	GGNCC	3 cut(s)	333, 551, 1120
PstI	CTGCAG	1 cut(s)	1416
PstNI	CAGNNNCTG	1 cut(s)	439
PsuI	RGATCY	1 cut(s)	2068
PsyI	GACNNNGTC	1 cut(s)	1265
PvuII	CAGCTG	1 cut(s)	1382
RsaI	GTAC	7 cut(s)	764, 961, 1040, 1673, 2000, 2096, 2241
RsaNI	GTAC	7 cut(s)	763, 960, 1039, 1672, 1999, 2095, 2240
RseI	CAYNNNNRTG	2 cut(s)	489, 1957
SaqAI	TTAA	9 cut(s)	219, 246, 273, 660, 696, 1295, 1497, 2075, 2178
SatI	GCNGC	5 cut(s)	6, 943, 1107, 1282, 2194
Sau3AI	GATC	4 cut(s)	507, 634, 2025, 2068
Sau96I	GGNCC	3 cut(s)	333, 551, 1120
SchI	GAGTC	3 cut(s)	574, 1275, 1752
ScrFI	CCNGG	7 cut(s)	430, 530, 793, 903, 1176, 1939, 2201
SduI	GDGCHC	3 cut(s)	593, 651, 832
SexAI	ACCWGGT	2 cut(s)	528, 1174
SfaNI	GCATC	4 cut(s)	168, 202, 730, 2205
SfcI	CTRYAG	4 cut(s)	130, 153, 411, 1412
SfiI	GGCCNNNNNGGCC	1 cut(s)	846
SinI	GGWCC	2 cut(s)	551, 1120
SmiMI	CAYNNNNRTG	2 cut(s)	489, 1957
SmlI	CTYRAG	5 cut(s)	487, 695, 955, 1767, 2081
SmoI	CTYRAG	5 cut(s)	487, 695, 955, 1767, 2081
SsiI	CCGC	2 cut(s)	1131, 1991
SspI	AATATT	2 cut(s)	547, 578
SspMI	CTAG	7 cut(s)	59, 570, 594, 1538, 1616, 2129, 2261
StyD4I	CCNGG	7 cut(s)	428, 528, 791, 901, 1174, 1937, 2199
StyI	CCWWGG	2 cut(s)	58, 2052
TaiI	ACGT	1 cut(s)	1998
TaqI	TCGA	5 cut(s)	101, 168, 473, 1976, 2225
TaqII	GACCGA	1 cut(s)	1862
TatI	WGTACW	4 cut(s)	762, 959, 1671, 1998
TfiI	GAWTC	6 cut(s)	347, 377, 481, 715, 788, 1612
Tru1I	TTAA	9 cut(s)	219, 246, 273, 660, 696, 1295, 1497, 2075, 2178
Tru9I	TTAA	9 cut(s)	219, 246, 273, 660, 696, 1295, 1497, 2075, 2178
TscAI	CASTG	7 cut(s)	440, 1133, 1416, 1551, 1753, 1820, 1989
TseFI	GTSAC	4 cut(s)	260, 807, 1183, 1817
TseI	GCWGC	5 cut(s)	5, 942, 1106, 1281, 2193
Tsp45I	GTSAC	4 cut(s)	260, 807, 1183, 1817
TspDTI	ATGAA	9 cut(s)	728, 904, 981, 999, 1598, 1691, 1803, 2130, 2243
TspGWI	ACGGA	1 cut(s)	1026
TspRI	CASTG	7 cut(s)	440, 1133, 1416, 1551, 1753, 1820, 1989
Tth111I	GACNNNGTC	1 cut(s)	1265
Van91I	CCANNNNNTGG	3 cut(s)	548, 818, 2104
Vha464I	CTTAAG	1 cut(s)	695
VpaK11BI	GGWCC	2 cut(s)	551, 1120
XapI	RAATTY	5 cut(s)	103, 310, 853, 1375, 2281
XceI	RCATGY	1 cut(s)	1975
XmaJI	CCTAGG	1 cut(s)	58
XmiI	GTMKAC	1 cut(s)	1774
XmnI	GAANNNNTTC	2 cut(s)	299, 577
XspI	CTAG	7 cut(s)	59, 570, 594, 1538, 1616, 2129, 2261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.