photo-lyase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD11G1310000.v1.1 |
| pyrus_communis | pycom03g22820 pycom11g27090 |
| rosa_chinensis | RchiOBHm_Chr1g0369641 RchiOBHm_Chr2g0152691 RchiOBHm_Chr3g0456121 RchiOBHm_Chr5g0034131 RchiOBHm_Chr7g0201231 |
| rosa_laevigata | RLG00000001246 RLG00000007824 RLG00000008707 RLG00000010725 RLG00000017996 RLG00000023063 RLG00000028796 RLG00000031575 RLG00000032570 |
| rosa_multiflora | Rmu_sc0002058.1_g000010 Rmu_sc0006422.1_g000032 Rmu_sc0016279.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00004820 Rroxscaffold_2G00087020 Rroxscaffold_3G00227600 |
| rosa_samantha | Rh1DG047500 Rh2DG294900 Rh3BG159500 Rh3CG159500 Rh3DG160000 Rh4AG026900 Rh5CG266100 Rh5DG574800 Rh6AG290600 Rh6BG483100 Rh6CG226900 Rh7CG200200 Rh7DG194300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 34, 130 |
| AclWI | GGATC | 2 cut(s) | 62, 145 |
| AcuI | CTGAAG | 1 cut(s) | 195 |
| AgsI | TTSAA | 1 cut(s) | 187 |
| AluBI | AGCT | 1 cut(s) | 65 |
| AluI | AGCT | 1 cut(s) | 65 |
| AlwI | GGATC | 2 cut(s) | 62, 145 |
| AoxI | GGCC | 1 cut(s) | 81 |
| AspS9I | GGNCC | 1 cut(s) | 170 |
| AvaII | GGWCC | 1 cut(s) | 170 |
| BccI | CCATC | 1 cut(s) | 91 |
| Bme18I | GGWCC | 1 cut(s) | 170 |
| BmgT120I | GGNCC | 1 cut(s) | 170 |
| BmsI | GCATC | 3 cut(s) | 9, 105, 169 |
| BpuEI | CTTGAG | 1 cut(s) | 176 |
| BseGI | GGATG | 1 cut(s) | 138 |
| BshFI | GGCC | 1 cut(s) | 83 |
| BsnI | GGCC | 1 cut(s) | 83 |
| Bsp143I | GATC | 2 cut(s) | 67, 150 |
| BspACI | CCGC | 2 cut(s) | 34, 130 |
| BspANI | GGCC | 1 cut(s) | 83 |
| BspPI | GGATC | 2 cut(s) | 62, 145 |
| BssMI | GATC | 2 cut(s) | 67, 150 |
| BstF5I | GGATG | 1 cut(s) | 138 |
| BstKTI | GATC | 2 cut(s) | 70, 153 |
| BstMBI | GATC | 2 cut(s) | 67, 150 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 40, 62 |
| BstX2I | RGATCY | 1 cut(s) | 150 |
| BstYI | RGATCY | 1 cut(s) | 150 |
| BsuRI | GGCC | 1 cut(s) | 83 |
| BtsCI | GGATG | 1 cut(s) | 138 |
| Cfr13I | GGNCC | 1 cut(s) | 170 |
| CviAII | CATG | 2 cut(s) | 23, 119 |
| CviJI | RGCY | 2 cut(s) | 65, 83 |
| CviKI_1 | RGCY | 2 cut(s) | 65, 83 |
| DpnI | GATC | 2 cut(s) | 69, 152 |
| DpnII | GATC | 2 cut(s) | 67, 150 |
| Eco147I | AGGCCT | 1 cut(s) | 83 |
| Eco47I | GGWCC | 1 cut(s) | 170 |
| Eco57I | CTGAAG | 1 cut(s) | 195 |
| EcoO109I | RGGNCCY | 1 cut(s) | 170 |
| EcoT22I | ATGCAT | 2 cut(s) | 24, 120 |
| FaeI | CATG | 2 cut(s) | 26, 122 |
| FaiI | YATR | 6 cut(s) | 24, 32, 120, 128, 196, 198 |
| FatI | CATG | 2 cut(s) | 22, 118 |
| FokI | GGATG | 1 cut(s) | 145 |
| HaeIII | GGCC | 1 cut(s) | 83 |
| Hin1II | CATG | 2 cut(s) | 26, 122 |
| Hpy166II | GTNNAC | 1 cut(s) | 162 |
| Hpy188III | TCNNGA | 1 cut(s) | 76 |
| Hpy8I | GTNNAC | 1 cut(s) | 162 |
| HpyAV | CCTTC | 2 cut(s) | 46, 73 |
| HpyCH4V | TGCA | 3 cut(s) | 22, 43, 118 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 40, 62 |
| Hsp92II | CATG | 2 cut(s) | 26, 122 |
| Kzo9I | GATC | 2 cut(s) | 67, 150 |
| LpnPI | CCDG | 2 cut(s) | 61, 186 |
| LweI | GCATC | 3 cut(s) | 9, 105, 169 |
| MalI | GATC | 2 cut(s) | 69, 152 |
| MboI | GATC | 2 cut(s) | 67, 150 |
| MboII | GAAGA | 3 cut(s) | 28, 124, 188 |
| MfeI | CAATTG | 1 cut(s) | 44 |
| MflI | RGATCY | 1 cut(s) | 150 |
| MluCI | AATT | 2 cut(s) | 44, 89 |
| MnlI | CCTC | 4 cut(s) | 30, 81, 94, 161 |
| Mph1103I | ATGCAT | 2 cut(s) | 24, 120 |
| MseI | TTAA | 1 cut(s) | 202 |
| MspA1I | CMGCKG | 1 cut(s) | 65 |
| MunI | CAATTG | 1 cut(s) | 44 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 40, 62 |
| NdeII | GATC | 2 cut(s) | 67, 150 |
| NlaIII | CATG | 2 cut(s) | 26, 122 |
| NsiI | ATGCAT | 2 cut(s) | 24, 120 |
| PceI | AGGCCT | 1 cut(s) | 83 |
| PpuMI | RGGWCCY | 1 cut(s) | 170 |
| Psp5II | RGGWCCY | 1 cut(s) | 170 |
| PspPI | GGNCC | 1 cut(s) | 170 |
| PspPPI | RGGWCCY | 1 cut(s) | 170 |
| PsuI | RGATCY | 1 cut(s) | 150 |
| PvuII | CAGCTG | 1 cut(s) | 65 |
| SaqAI | TTAA | 1 cut(s) | 202 |
| Sau3AI | GATC | 2 cut(s) | 67, 150 |
| Sau96I | GGNCC | 1 cut(s) | 170 |
| SetI | ASST | 2 cut(s) | 67, 175 |
| SfaNI | GCATC | 3 cut(s) | 9, 105, 169 |
| SgeI | CNNG | 9 cut(s) | 25, 35, 88, 121, 131, 167, 177, 185, 196 |
| SinI | GGWCC | 1 cut(s) | 170 |
| SmlI | CTYRAG | 1 cut(s) | 155 |
| SmoI | CTYRAG | 1 cut(s) | 155 |
| Sse9I | AATT | 2 cut(s) | 44, 89 |
| SseBI | AGGCCT | 1 cut(s) | 83 |
| SsiI | CCGC | 2 cut(s) | 34, 130 |
| StuI | AGGCCT | 1 cut(s) | 83 |
| TasI | AATT | 2 cut(s) | 44, 89 |
| Tru1I | TTAA | 1 cut(s) | 202 |
| Tru9I | TTAA | 1 cut(s) | 202 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| VpaK11BI | GGWCC | 1 cut(s) | 170 |
| Zsp2I | ATGCAT | 2 cut(s) | 24, 120 |