photo-lyase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD11G1310000.v1.1 |
| pyrus_communis | pycom03g22820 pycom11g27090 |
| rosa_chinensis | RchiOBHm_Chr1g0369641 RchiOBHm_Chr2g0152691 RchiOBHm_Chr3g0456121 RchiOBHm_Chr5g0034131 RchiOBHm_Chr7g0201231 |
| rosa_laevigata | RLG00000001246 RLG00000007824 RLG00000008707 RLG00000010725 RLG00000017996 RLG00000023063 RLG00000028796 RLG00000031575 RLG00000032570 |
| rosa_multiflora | Rmu_sc0002058.1_g000010 Rmu_sc0006422.1_g000032 Rmu_sc0016279.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00004820 Rroxscaffold_2G00087020 Rroxscaffold_3G00227600 |
| rosa_samantha | Rh1DG047500 Rh2DG294900 Rh3BG159500 Rh3CG159500 Rh3DG160000 Rh4AG026900 Rh5CG266100 Rh5DG574800 Rh6AG290600 Rh6BG483100 Rh6CG226900 Rh7CG200200 Rh7DG194300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 54 |
| AclWI | GGATC | 1 cut(s) | 185 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 82 |
| AluBI | AGCT | 2 cut(s) | 115, 188 |
| AluI | AGCT | 2 cut(s) | 115, 188 |
| Alw26I | GTCTC | 1 cut(s) | 77 |
| AlwI | GGATC | 1 cut(s) | 185 |
| AoxI | GGCC | 1 cut(s) | 204 |
| ApeKI | GCWGC | 3 cut(s) | 106, 109, 112 |
| AsuII | TTCGAA | 1 cut(s) | 99 |
| BbvI | GCAGC | 3 cut(s) | 118, 121, 124 |
| BccI | CCATC | 1 cut(s) | 214 |
| BceAI | ACGGC | 1 cut(s) | 41 |
| BcoDI | GTCTC | 1 cut(s) | 77 |
| BfaI | CTAG | 1 cut(s) | 116 |
| BisI | GCNGC | 3 cut(s) | 107, 110, 113 |
| BlsI | GCNGC | 3 cut(s) | 108, 111, 114 |
| BmsI | GCATC | 1 cut(s) | 228 |
| Bpu14I | TTCGAA | 1 cut(s) | 99 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 35, 65 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 82 |
| BseGI | GGATG | 1 cut(s) | 91 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BseXI | GCAGC | 3 cut(s) | 118, 121, 124 |
| BshFI | GGCC | 1 cut(s) | 206 |
| BsiSI | CCGG | 1 cut(s) | 76 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BsmAI | GTCTC | 1 cut(s) | 77 |
| BsnI | GGCC | 1 cut(s) | 206 |
| Bsp119I | TTCGAA | 1 cut(s) | 99 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| BspACI | CCGC | 1 cut(s) | 54 |
| BspANI | GGCC | 1 cut(s) | 206 |
| BspPI | GGATC | 1 cut(s) | 185 |
| BspQI | GCTCTTC | 1 cut(s) | 6 |
| BspT104I | TTCGAA | 1 cut(s) | 99 |
| BssMI | GATC | 1 cut(s) | 190 |
| Bst6I | CTCTTC | 2 cut(s) | 6, 152 |
| BstBI | TTCGAA | 1 cut(s) | 99 |
| BstF5I | GGATG | 1 cut(s) | 91 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMAI | GTCTC | 1 cut(s) | 77 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 30, 112, 185 |
| BstV1I | GCAGC | 3 cut(s) | 118, 121, 124 |
| BsuRI | GGCC | 1 cut(s) | 206 |
| BtsCI | GGATG | 1 cut(s) | 91 |
| CviAII | CATG | 2 cut(s) | 242, 275 |
| CviJI | RGCY | 4 cut(s) | 96, 115, 188, 206 |
| CviKI_1 | RGCY | 4 cut(s) | 96, 115, 188, 206 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| Eam1104I | CTCTTC | 2 cut(s) | 6, 152 |
| EarI | CTCTTC | 2 cut(s) | 6, 152 |
| EciI | GGCGGA | 1 cut(s) | 43 |
| Eco147I | AGGCCT | 1 cut(s) | 206 |
| EcoT22I | ATGCAT | 1 cut(s) | 243 |
| FaeI | CATG | 2 cut(s) | 245, 278 |
| FaiI | YATR | 6 cut(s) | 93, 243, 251, 270, 276, 281 |
| FatI | CATG | 2 cut(s) | 241, 274 |
| Fnu4HI | GCNGC | 3 cut(s) | 107, 110, 113 |
| FokI | GGATG | 1 cut(s) | 98 |
| Fsp4HI | GCNGC | 3 cut(s) | 107, 110, 113 |
| FspBI | CTAG | 1 cut(s) | 116 |
| GluI | GCNGC | 3 cut(s) | 107, 110, 113 |
| HaeIII | GGCC | 1 cut(s) | 206 |
| HapII | CCGG | 1 cut(s) | 76 |
| Hin1II | CATG | 2 cut(s) | 245, 278 |
| HinfI | GANTC | 1 cut(s) | 65 |
| HpaII | CCGG | 1 cut(s) | 76 |
| Hpy166II | GTNNAC | 1 cut(s) | 259 |
| Hpy188I | TCNGA | 1 cut(s) | 62 |
| Hpy188III | TCNNGA | 3 cut(s) | 151, 199, 260 |
| Hpy8I | GTNNAC | 1 cut(s) | 259 |
| Hpy99I | CGWCG | 1 cut(s) | 62 |
| HpyAV | CCTTC | 2 cut(s) | 169, 196 |
| HpyCH4V | TGCA | 3 cut(s) | 106, 166, 241 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 30, 112, 185 |
| Hsp92II | CATG | 2 cut(s) | 245, 278 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LguI | GCTCTTC | 1 cut(s) | 6 |
| LpnPI | CCDG | 3 cut(s) | 67, 89, 184 |
| Lsp1109I | GCAGC | 3 cut(s) | 118, 121, 124 |
| LweI | GCATC | 1 cut(s) | 228 |
| MaeI | CTAG | 1 cut(s) | 116 |
| MalI | GATC | 1 cut(s) | 192 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 5 cut(s) | 20, 23, 166, 169, 247 |
| MfeI | CAATTG | 1 cut(s) | 167 |
| MluCI | AATT | 3 cut(s) | 142, 167, 212 |
| MmeI | TCCRAC | 1 cut(s) | 40 |
| MnlI | CCTC | 7 cut(s) | 61, 112, 118, 124, 153, 204, 217 |
| Mph1103I | ATGCAT | 1 cut(s) | 243 |
| MseI | TTAA | 1 cut(s) | 146 |
| MslI | CAYNNNNRTG | 2 cut(s) | 84, 273 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| MspI | CCGG | 1 cut(s) | 76 |
| MunI | CAATTG | 1 cut(s) | 167 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 30, 112, 185 |
| NdeII | GATC | 1 cut(s) | 190 |
| NlaIII | CATG | 2 cut(s) | 245, 278 |
| NsiI | ATGCAT | 1 cut(s) | 243 |
| NspV | TTCGAA | 1 cut(s) | 99 |
| PceI | AGGCCT | 1 cut(s) | 206 |
| PciSI | GCTCTTC | 1 cut(s) | 6 |
| PfeI | GAWTC | 1 cut(s) | 65 |
| PkrI | GCNGC | 3 cut(s) | 108, 111, 114 |
| PvuII | CAGCTG | 1 cut(s) | 188 |
| RseI | CAYNNNNRTG | 2 cut(s) | 84, 273 |
| SapI | GCTCTTC | 1 cut(s) | 6 |
| SaqAI | TTAA | 1 cut(s) | 146 |
| SatI | GCNGC | 3 cut(s) | 107, 110, 113 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| SetI | ASST | 2 cut(s) | 117, 190 |
| SfaNI | GCATC | 1 cut(s) | 228 |
| SfuI | TTCGAA | 1 cut(s) | 99 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 84, 273 |
| Sse9I | AATT | 3 cut(s) | 142, 167, 212 |
| SseBI | AGGCCT | 1 cut(s) | 206 |
| SsiI | CCGC | 1 cut(s) | 54 |
| SspMI | CTAG | 1 cut(s) | 116 |
| StuI | AGGCCT | 1 cut(s) | 206 |
| TaqI | TCGA | 1 cut(s) | 99 |
| TasI | AATT | 3 cut(s) | 142, 167, 212 |
| TfiI | GAWTC | 1 cut(s) | 65 |
| Tru1I | TTAA | 1 cut(s) | 146 |
| Tru9I | TTAA | 1 cut(s) | 146 |
| TseI | GCWGC | 3 cut(s) | 106, 109, 112 |
| TspDTI | ATGAA | 2 cut(s) | 215, 257 |
| XspI | CTAG | 1 cut(s) | 116 |
| Zsp2I | ATGCAT | 1 cut(s) | 243 |