Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002865

Physical Location & Seq

Genomic Coordinates Reverse (-)

50776165 .. 50791662

Gene Structure 15498 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009311

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGAACAAAGCTACAGATCAATTGAAGAGAAACAACACGGCCGTTCTCGATCTATTTCTGCTCAATTTCCTGTTTTTTCCGGCAGTAGCTGTTTATTATACCGCCGTGGCAAGTCTGGGTTTGCATTCATATCGGTGTACCTCATCCGGAGAGAAGACTACAATACCAGCTCACAGAAGGATGAGTCACTCAACTAGGTTGCCTTGCAACCCAAGCAATGATTTGGAGACCGATCTGAAGGAGCAGGTTCCTGTTGGGCGCATGAACCGTTGGGCTGCGGCTATCTTCAAAGGAGTTGCAGATCAAATGAAAAGGCCTGGTGATGGTTTTCCAATTGAACCAGATACACTTGCTAGTTTGACGAGGAATAGTGATGTCCCTGCTGATGGCATTATAATCCGTGGTTGCTCACTTGCAATTGATAAGTCCAGAGTCACTGGAGAGAGCATGATTTTTGACGAGGATTCAAGGAAACCATTTGTACAGTCTGGCTGGAAAGTAGCACATGGCAGTGCTACTATGCTGGTAACTGGGGTAGGGAAATTTACTGAATTGGGAAGGCTCAGGGCTAGCGCCGATTCAAAAGACACGGAGAAACGGAAGAATAAAACCCACTTGCAGGTGCTTTTAAAGGAGGTTGCTACCTTCATGGGTGCTGTCGGATTCATGGTTGCTGCCATTGTTGTATTTGTTGTTTGGATCAGAGACTTCTTTACTGGTGATAGTTCAAACGGAAGTCGTGAACCTGGAAGTACACTTGAAGAAGTCATTCGAATTAGTATTATTGCAGTCGCAATTTTTGTCGTTTCATTACCTGAAGTGCTTCCTTTAGCTTTCAACATAAGCCGTCTCAGCTCAATGAAAAAGATGAAGGCAGACAACATCTCGGTGCGGAGGCCAGCTGTATGTGAAACCATGGCCTTATGCAATGGTGCAGTCTGTGACATGACTGGAATTACTTCGGACAACGTGGATGATGTTCAAGCGGCGATCAAGGAAATGCAAAGAATTGGCATTAAGGTACGCCTTGTTACGCATAACGATCTTCAAACTGCAAAAGAAATTGCTATGCAATGTGGCATACTTGCTTCTGATGGGTCAGATGCTAGTGAGGTAGTTTTTAAAGGAGAAGCGTTCCGACAACTTTCTGATAGTGAGAGAGAAGACTTAGCAGAGAAGATTTTGGTAATGCCACGGTCTACCCCCGATGACAAACTTTTGCTTGTGCAAGCACTGCGGAAAAGACGAAAGGTTGTTACTGTCACTGGATCTGTCAGTAGTGATGCTGGTGCCCTACAAGAGGCCGACATTGGTCTTGCTATGGCTGAACAAGCGGATGAAGTTGCTAAAGAGAGTTCAGATATCATAATCTTGGATGGCAATTTCGCTACTGTAGTCAAGTGTTTCAAAGGGGGACGATCTATGCATGGAAACGTTCTGAGAGTTATGCAGCAGCAACTTACAGCCAATATTGTAGCAGTAACTATAAACTGCTTGGCGGCAGTTTACTATCATGACATTCCGCTCAATGCTGTGCAGTTTGTGTGGGTGAATGTTATCATATTTGGTCTTGGACCAGTAGTATTGGCTACTGAATCTCCGGCTGATCACCTGATGAACGGACCCCCTATTGACCGAGGACAACTTCGTAAAAAATGTATTCAGTGGAAGGGACTGTTGATACAGGTTCTGTACCAAATTATTGCCCTGCTTGTCATCAATTTTGAAGGAGTGAATTTACTGAAAAATTATACCAGAGACCATGCCACCAAAGTGAAAAATACAATGATATTCAACACATTTGTTATATGTCAGATTTCCATTGAATTTGGAGTTCGAAAGACTGGTATAGTGGATCATCCTTTGAAATGGATTACTGCTAACTCCGTGTTTCTGGGAATAGTGGGAATAATTCTTGTGATTCAGTTTATCATCATAGAGTTTCTTGGGAAGGCGTTTTTCTTAGTCAGGCTTAACTGGAAAGAGTGGCAGTTTTCCCTCACTCTTGGTATTGTCGATGCTTTTATTCGTGAAGCACTTGACACAAAGGAATCATCATTAAGATTCGATGTCGGCGATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009506 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

695

Amino Acids

76.37

Weight (kDa)

8.36

Isoelectric Point (pI)

31.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	113 - 190	5.3e-09	P-type ATPase actuator domain
Cation_ATPase_C	PF00689	507 - 679	2e-22	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002865)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06912
pyrus_communis	pycom14g06520
rosa_chinensis	RchiOBHm_Chr4g0398821 RchiOBHm_Chr4g0398831 RchiOBHm_Chr4g0398851 RchiOBHm_Chr4g0398861
rosa_laevigata	RLG00000009311 RLG00000009312 RLG00000009316
rosa_multiflora	Rmu_sc0002885.1_g000007 Rmu_sc0002885.1_g000009 Rmu_sc0004474.1_g000001 Rmu_sc0004751.1_g000005
rosa_roxburghii	Rroxscaffold_173G00435010 Rroxscaffold_5G00343860 Rroxscaffold_5G00343900 Rroxscaffold_5G00355000
rosa_rugosa	Rorug04G0012100 Rorug04G0012300 Rorug04G0012400 Rorug04G0012600
rosa_samantha	Rh4AG090100 Rh4AG090400 Rh4BG087200 Rh4BG087500 Rh4BG087600 Rh4BG087700 Rh4CG098200 Rh4CG098400 Rh4CG098700 Rh4DG081500 Rh4DG081600 Rh4DG081800 Rh4DG082000 Rh4DG082300 Rh4DG082700
rosa_wichuraiana	Rw4G007420 Rw4G007440 Rw4G007480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	395
AarI	CACCTGC	1 cut(s)	610
Acc36I	ACCTGC	2 cut(s)	235, 610
AccB1I	GGYRCC	1 cut(s)	1289
AccBSI	CCGCTC	1 cut(s)	1525
AccI	GTMKAC	1 cut(s)	1199
AccIII	TCCGGA	1 cut(s)	146
AciI	CCGC	8 cut(s)	102, 278, 892, 986, 1237, 1334, 1499, 1523
AclI	AACGTT	1 cut(s)	1434
AclWI	GGATC	3 cut(s)	707, 1276, 1863
AcoI	YGGCCR	1 cut(s)	39
AcsI	RAATTY	3 cut(s)	542, 1735, 1826
AcuI	CTGAAG	2 cut(s)	257, 837
AfaI	GTAC	5 cut(s)	139, 483, 754, 1023, 1694
AfiI	CCNNNNNNNGG	4 cut(s)	323, 386, 619, 1300
AjnI	CCWGG	2 cut(s)	316, 745
AleI	CACNNNNGTG	1 cut(s)	1772
AluBI	AGCT	6 cut(s)	11, 89, 170, 833, 855, 902
AluI	AGCT	6 cut(s)	11, 89, 170, 833, 855, 902
Alw26I	GTCTC	4 cut(s)	221, 699, 854, 1752
AlwI	GGATC	3 cut(s)	707, 1276, 1863
AlwNI	CAGNNNCTG	2 cut(s)	89, 1690
Aor13HI	TCCGGA	1 cut(s)	146
AoxI	GGCC	5 cut(s)	39, 314, 896, 918, 1302
ApeKI	GCWGC	4 cut(s)	275, 674, 1450, 1453
ApoI	RAATTY	3 cut(s)	542, 1735, 1826
Asp700I	GAANNNNTTC	3 cut(s)	768, 822, 958
AspLEI	GCGC	2 cut(s)	261, 575
AspS9I	GGNCC	2 cut(s)	1574, 1622
AsuHPI	GGTGA	4 cut(s)	332, 731, 1561, 1601
AsuII	TTCGAA	2 cut(s)	772, 1837
AsuNHI	GCTAGC	1 cut(s)	569
AvaII	GGWCC	2 cut(s)	1574, 1622
BaeGI	GKGCMC	1 cut(s)	1294
BanI	GGYRCC	1 cut(s)	1289
BbsI	GAAGAC	2 cut(s)	161, 1170
BbvI	GCAGC	4 cut(s)	262, 661, 1462, 1465
BccI	CCATC	4 cut(s)	317, 380, 1088, 1370
BceAI	ACGGC	4 cut(s)	26, 54, 89, 831
BcgI	CGANNNNNNTGC	2 cut(s)	113, 147
BciT130I	CCWGG	2 cut(s)	318, 747
BclI	TGATCA	1 cut(s)	1606
BcoDI	GTCTC	4 cut(s)	221, 699, 854, 1752
BfaI	CTAG	4 cut(s)	195, 354, 570, 1107
BfmI	CTRYAG	2 cut(s)	12, 1392
BfoI	RGCGCY	1 cut(s)	576
BfuAI	ACCTGC	2 cut(s)	235, 610
BisI	GCNGC	7 cut(s)	276, 279, 675, 987, 1451, 1454, 1500
BlsI	GCNGC	7 cut(s)	277, 280, 676, 988, 1452, 1455, 1501
Bme1390I	CCNGG	2 cut(s)	318, 747
Bme18I	GGWCC	2 cut(s)	1574, 1622
BmgT120I	GGNCC	2 cut(s)	1574, 1622
BmiI	GGNNCC	3 cut(s)	249, 1291, 1624
BmrFI	CCNGG	2 cut(s)	318, 747
BmrI	ACTGGG	1 cut(s)	540
BmsI	GCATC	3 cut(s)	1093, 1273, 2008
BmtI	GCTAGC	1 cut(s)	573
BmuI	ACTGGG	1 cut(s)	540
BoxI	GACNNNNGTC	1 cut(s)	1311
BpiI	GAAGAC	2 cut(s)	161, 1170
BpmI	CTGGAG	1 cut(s)	459
Bpu10I	CCTNAGC	1 cut(s)	563
Bpu14I	TTCGAA	2 cut(s)	772, 1837
BsaI	GGTCTC	2 cut(s)	221, 1752
BsaJI	CCNNGG	5 cut(s)	105, 400, 915, 1193, 1636
BsaWI	WCCGGW	1 cut(s)	146
BsaXI	ACNNNNNCTCC	2 cut(s)	1582, 1612
Bsc4I	CCNNNNNNNGG	4 cut(s)	323, 386, 619, 1300
Bse1I	ACTGG	8 cut(s)	442, 535, 721, 955, 1270, 1577, 1849, 1982
Bse3DI	GCAATG	3 cut(s)	223, 934, 1079
BseAI	TCCGGA	1 cut(s)	146
BseBI	CCWGG	2 cut(s)	318, 747
BseDI	CCNNGG	5 cut(s)	105, 400, 915, 1193, 1636
BseGI	GGATG	6 cut(s)	143, 186, 979, 1342, 1381, 1858
BseLI	CCNNNNNNNGG	4 cut(s)	323, 386, 619, 1300
BseMI	GCAATG	3 cut(s)	223, 934, 1079
BseMII	CTCAG	3 cut(s)	577, 865, 1430
BseNI	ACTGG	8 cut(s)	442, 535, 721, 955, 1270, 1577, 1849, 1982
BseSI	GKGCMC	1 cut(s)	1294
BseX3I	CGGCCG	1 cut(s)	39
BseXI	GCAGC	4 cut(s)	262, 661, 1462, 1465
BsgI	GTGCAG	2 cut(s)	954, 1556
Bsh1285I	CGRYCG	1 cut(s)	42
BshFI	GGCC	5 cut(s)	41, 316, 898, 920, 1304
BshNI	GGYRCC	1 cut(s)	1289
BsiEI	CGRYCG	1 cut(s)	42
BsiSI	CCGG	3 cut(s)	80, 147, 1601
BslFI	GGGAC	3 cut(s)	362, 1428, 1686
BslI	CCNNNNNNNGG	4 cut(s)	323, 386, 619, 1300
BsmAI	GTCTC	4 cut(s)	221, 699, 854, 1752
BsmBI	CGTCTC	1 cut(s)	854
BsmFI	GGGAC	3 cut(s)	362, 1428, 1686
BsmI	GAATGC	1 cut(s)	124
BsnI	GGCC	5 cut(s)	41, 316, 898, 920, 1304
Bso31I	GGTCTC	2 cut(s)	221, 1752
Bsp119I	TTCGAA	2 cut(s)	772, 1837
Bsp1286I	GDGCHC	1 cut(s)	1294
Bsp13I	TCCGGA	1 cut(s)	146
Bsp1407I	TGTACA	1 cut(s)	481
Bsp19I	CCATGG	1 cut(s)	915
BspACI	CCGC	8 cut(s)	102, 278, 892, 986, 1237, 1334, 1499, 1523
BspANI	GGCC	5 cut(s)	41, 316, 898, 920, 1304
BspCNI	CTCAG	3 cut(s)	576, 864, 1431
BspEI	TCCGGA	1 cut(s)	146
BspHI	TCATGA	1 cut(s)	1513
BspLI	GGNNCC	3 cut(s)	249, 1291, 1624
BspMI	ACCTGC	2 cut(s)	235, 610
BspOI	GCTAGC	1 cut(s)	573
BspPI	GGATC	3 cut(s)	707, 1276, 1863
BspT104I	TTCGAA	2 cut(s)	772, 1837
BspT107I	GGYRCC	1 cut(s)	1289
BspTNI	GGTCTC	2 cut(s)	221, 1752
BsrBI	CCGCTC	1 cut(s)	1525
BsrDI	GCAATG	3 cut(s)	223, 934, 1079
BsrGI	TGTACA	1 cut(s)	481
BsrI	ACTGG	8 cut(s)	442, 535, 721, 955, 1270, 1577, 1849, 1982
BssECI	CCNNGG	5 cut(s)	105, 400, 915, 1193, 1636
BssT1I	CCWWGG	1 cut(s)	915
Bst2UI	CCWGG	2 cut(s)	318, 747
Bst4CI	ACNGT	6 cut(s)	269, 486, 1197, 1261, 1393, 1677
Bst6I	CTCTTC	1 cut(s)	20
BstAPI	GCANNNNNTGC	1 cut(s)	1234
BstAUI	TGTACA	1 cut(s)	481
BstBI	TTCGAA	2 cut(s)	772, 1837
BstC8I	GCNNGC	3 cut(s)	571, 900, 1230
BstDEI	CTNAG	5 cut(s)	563, 851, 1168, 1439, 1963
BstDSI	CCRYGG	4 cut(s)	105, 400, 915, 1193
BstENI	CCTNNNNNAGG	1 cut(s)	1298
BstF5I	GGATG	6 cut(s)	143, 186, 979, 1342, 1381, 1858
BstH2I	RGCGCY	1 cut(s)	576
BstHHI	GCGC	2 cut(s)	261, 575
BstMAI	GTCTC	4 cut(s)	221, 699, 854, 1752
BstMCI	CGRYCG	1 cut(s)	42
BstMWI	GCNNNNNNNGC	4 cut(s)	213, 852, 1234, 1331
BstNI	CCWGG	2 cut(s)	318, 747
BstPAI	GACNNNNGTC	1 cut(s)	1311
BstSCI	CCNGG	2 cut(s)	316, 745
BstSFI	CTRYAG	2 cut(s)	12, 1392
BstSLI	GKGCMC	1 cut(s)	1294
BstV1I	GCAGC	4 cut(s)	262, 661, 1462, 1465
BstV2I	GAAGAC	2 cut(s)	161, 1170
BstX2I	RGATCY	1 cut(s)	1268
BstYI	RGATCY	1 cut(s)	1268
BstZI	CGGCCG	1 cut(s)	39
BsuRI	GGCC	5 cut(s)	41, 316, 898, 920, 1304
BtgI	CCRYGG	4 cut(s)	105, 400, 915, 1193
BtsCI	GGATG	6 cut(s)	143, 186, 979, 1342, 1381, 1858
BtsI	GCAGTG	2 cut(s)	517, 1232
BtsIMutI	CAGTG	5 cut(s)	435, 517, 1232, 1263, 1670
BveI	ACCTGC	2 cut(s)	235, 610
Cac8I	GCNNGC	3 cut(s)	571, 900, 1230
CaiI	CAGNNNCTG	2 cut(s)	89, 1690
CciI	TCATGA	1 cut(s)	1513
CfoI	GCGC	2 cut(s)	261, 575
Cfr13I	GGNCC	2 cut(s)	1574, 1622
Csp6I	GTAC	5 cut(s)	138, 482, 753, 1022, 1693
CviQI	GTAC	5 cut(s)	138, 482, 753, 1022, 1693
DdeI	CTNAG	5 cut(s)	563, 851, 1168, 1439, 1963
DraI	TTTAAA	2 cut(s)	630, 1123
EaeI	YGGCCR	1 cut(s)	39
EagI	CGGCCG	1 cut(s)	39
Eam1104I	CTCTTC	1 cut(s)	20
EarI	CTCTTC	1 cut(s)	20
EclXI	CGGCCG	1 cut(s)	39
Eco130I	CCWWGG	1 cut(s)	915
Eco147I	AGGCCT	1 cut(s)	316
Eco31I	GGTCTC	2 cut(s)	221, 1752
Eco32I	GATATC	1 cut(s)	1363
Eco47I	GGWCC	2 cut(s)	1574, 1622
Eco52I	CGGCCG	1 cut(s)	39
Eco57I	CTGAAG	2 cut(s)	257, 837
EcoNI	CCTNNNNNAGG	1 cut(s)	1298
EcoRII	CCWGG	2 cut(s)	316, 745
EcoRV	GATATC	1 cut(s)	1363
EcoT14I	CCWWGG	1 cut(s)	915
EcoT22I	ATGCAT	1 cut(s)	1428
ErhI	CCWWGG	1 cut(s)	915
Esp3I	CGTCTC	1 cut(s)	854
FaqI	GGGAC	3 cut(s)	362, 1428, 1686
FbaI	TGATCA	1 cut(s)	1606
FblI	GTMKAC	1 cut(s)	1199
Fnu4HI	GCNGC	7 cut(s)	276, 279, 675, 987, 1451, 1454, 1500
FokI	GGATG	6 cut(s)	130, 193, 986, 1349, 1388, 1845
Fsp4HI	GCNGC	7 cut(s)	276, 279, 675, 987, 1451, 1454, 1500
FspBI	CTAG	4 cut(s)	195, 354, 570, 1107
GlaI	GCGC	2 cut(s)	260, 574
GluI	GCNGC	7 cut(s)	276, 279, 675, 987, 1451, 1454, 1500
GsuI	CTGGAG	1 cut(s)	459
HaeII	RGCGCY	1 cut(s)	576
HaeIII	GGCC	5 cut(s)	41, 316, 898, 920, 1304
HapII	CCGG	3 cut(s)	80, 147, 1601
HhaI	GCGC	2 cut(s)	261, 575
Hin6I	GCGC	2 cut(s)	259, 573
HinP1I	GCGC	2 cut(s)	259, 573
HinfI	GANTC	9 cut(s)	184, 432, 464, 578, 663, 1595, 1921, 2051, 2064
HpaII	CCGG	3 cut(s)	80, 147, 1601
HphI	GGTGA	4 cut(s)	332, 731, 1561, 1601
Hpy166II	GTNNAC	5 cut(s)	138, 743, 755, 1200, 1507
Hpy188III	TCNNGA	6 cut(s)	47, 147, 429, 740, 1514, 2030
Hpy8I	GTNNAC	5 cut(s)	138, 743, 755, 1200, 1507
HpyAV	CCTTC	8 cut(s)	171, 232, 552, 655, 865, 1663, 1721, 1945
HpyCH4III	ACNGT	6 cut(s)	269, 486, 1197, 1261, 1393, 1677
HpyCH4IV	ACGT	2 cut(s)	969, 1434
HpyF10VI	GCNNNNNNNGC	4 cut(s)	213, 852, 1234, 1331
HpyF3I	CTNAG	5 cut(s)	563, 851, 1168, 1439, 1963
HpySE526I	ACGT	2 cut(s)	969, 1434
HspAI	GCGC	2 cut(s)	259, 573
Kpn2I	TCCGGA	1 cut(s)	146
Ksp22I	TGATCA	1 cut(s)	1606
LmnI	GCTCC	1 cut(s)	241
Lsp1109I	GCAGC	4 cut(s)	262, 661, 1462, 1465
LweI	GCATC	3 cut(s)	1093, 1273, 2008
MaeI	CTAG	4 cut(s)	195, 354, 570, 1107
MaeII	ACGT	2 cut(s)	969, 1434
MaeIII	GTNAC	8 cut(s)	185, 433, 526, 941, 1030, 1255, 1261, 1480
MbiI	CCGCTC	1 cut(s)	1525
MboII	GAAGA	8 cut(s)	37, 166, 277, 613, 773, 1037, 1175, 1189
MfeI	CAATTG	3 cut(s)	20, 333, 417
MflI	RGATCY	1 cut(s)	1268
MhlI	GDGCHC	1 cut(s)	1294
MlyI	GAGTC	2 cut(s)	193, 441
MmeI	TCCRAC	2 cut(s)	640, 1162
MnlI	CCTC	9 cut(s)	151, 357, 454, 628, 888, 1105, 1294, 1631, 2009
Mph1103I	ATGCAT	1 cut(s)	1428
MroI	TCCGGA	1 cut(s)	146
MroXI	GAANNNNTTC	3 cut(s)	768, 822, 958
MseI	TTAA	6 cut(s)	629, 1017, 1122, 1974, 2060, 2083
MslI	CAYNNNNRTG	4 cut(s)	133, 510, 887, 1772
MspA1I	CMGCKG	1 cut(s)	902
MspI	CCGG	3 cut(s)	80, 147, 1601
MspR9I	CCNGG	2 cut(s)	318, 747
MunI	CAATTG	3 cut(s)	20, 333, 417
Mva1269I	GAATGC	1 cut(s)	124
MvaI	CCWGG	2 cut(s)	318, 747
MwoI	GCNNNNNNNGC	4 cut(s)	213, 852, 1234, 1331
NcoI	CCATGG	1 cut(s)	915
NheI	GCTAGC	1 cut(s)	569
NlaIV	GGNNCC	3 cut(s)	249, 1291, 1624
NmuCI	GTSAC	4 cut(s)	185, 433, 941, 1261
NsiI	ATGCAT	1 cut(s)	1428
NspV	TTCGAA	2 cut(s)	772, 1837
OliI	CACNNNNGTG	1 cut(s)	1772
PagI	TCATGA	1 cut(s)	1513
PaqCI	CACCTGC	1 cut(s)	610
PceI	AGGCCT	1 cut(s)	316
PcsI	WCGNNNNNNNCGW	1 cut(s)	2073
PctI	GAATGC	1 cut(s)	124
PdmI	GAANNNNTTC	3 cut(s)	768, 822, 958
PfeI	GAWTC	7 cut(s)	464, 578, 663, 1595, 1921, 2051, 2064
PkrI	GCNGC	7 cut(s)	277, 280, 676, 988, 1452, 1455, 1501
PleI	GAGTC	2 cut(s)	192, 440
PpsI	GAGTC	2 cut(s)	192, 440
PshAI	GACNNNNGTC	1 cut(s)	1311
PsiI	TTATAA	1 cut(s)	395
Psp1406I	AACGTT	1 cut(s)	1434
Psp6I	CCWGG	2 cut(s)	316, 745
PspGI	CCWGG	2 cut(s)	316, 745
PspN4I	GGNNCC	3 cut(s)	249, 1291, 1624
PspPI	GGNCC	2 cut(s)	1574, 1622
PstNI	CAGNNNCTG	2 cut(s)	89, 1690
PsuI	RGATCY	1 cut(s)	1268
PvuII	CAGCTG	1 cut(s)	902
RsaI	GTAC	5 cut(s)	139, 483, 754, 1023, 1694
RsaNI	GTAC	5 cut(s)	138, 482, 753, 1022, 1693
RseI	CAYNNNNRTG	4 cut(s)	133, 510, 887, 1772
SaqAI	TTAA	6 cut(s)	629, 1017, 1122, 1974, 2060, 2083
SatI	GCNGC	7 cut(s)	276, 279, 675, 987, 1451, 1454, 1500
Sau96I	GGNCC	2 cut(s)	1574, 1622
SchI	GAGTC	2 cut(s)	193, 441
ScrFI	CCNGG	2 cut(s)	318, 747
SduI	GDGCHC	1 cut(s)	1294
SfaNI	GCATC	3 cut(s)	1093, 1273, 2008
SfcI	CTRYAG	2 cut(s)	12, 1392
SfuI	TTCGAA	2 cut(s)	772, 1837
SinI	GGWCC	2 cut(s)	1574, 1622
SmiMI	CAYNNNNRTG	4 cut(s)	133, 510, 887, 1772
SseBI	AGGCCT	1 cut(s)	316
SsiI	CCGC	8 cut(s)	102, 278, 892, 986, 1237, 1334, 1499, 1523
SspI	AATATT	1 cut(s)	1471
SspMI	CTAG	4 cut(s)	195, 354, 570, 1107
StuI	AGGCCT	1 cut(s)	316
StyD4I	CCNGG	2 cut(s)	316, 745
StyI	CCWWGG	1 cut(s)	915
TaaI	ACNGT	6 cut(s)	269, 486, 1197, 1261, 1393, 1677
TaiI	ACGT	2 cut(s)	972, 1437
TaqI	TCGA	5 cut(s)	48, 772, 1837, 2016, 2067
TaqII	GACCGA	2 cut(s)	245, 1650
TatI	WGTACW	2 cut(s)	481, 752
TauI	GCSGC	3 cut(s)	281, 989, 1502
TfiI	GAWTC	7 cut(s)	464, 578, 663, 1595, 1921, 2051, 2064
Tru1I	TTAA	6 cut(s)	629, 1017, 1122, 1974, 2060, 2083
Tru9I	TTAA	6 cut(s)	629, 1017, 1122, 1974, 2060, 2083
TscAI	CASTG	5 cut(s)	442, 517, 1239, 1270, 1670
TseFI	GTSAC	4 cut(s)	185, 433, 941, 1261
TseI	GCWGC	4 cut(s)	275, 674, 1450, 1453
Tsp45I	GTSAC	4 cut(s)	185, 433, 941, 1261
TspGWI	ACGGA	6 cut(s)	389, 605, 613, 747, 1635, 1876
TspRI	CASTG	5 cut(s)	442, 517, 1239, 1270, 1670
VpaK11BI	GGWCC	2 cut(s)	1574, 1622
XagI	CCTNNNNNAGG	1 cut(s)	1298
XapI	RAATTY	3 cut(s)	542, 1735, 1826
XmiI	GTMKAC	1 cut(s)	1199
XmnI	GAANNNNTTC	3 cut(s)	768, 822, 958
XspI	CTAG	4 cut(s)	195, 354, 570, 1107
Zsp2I	ATGCAT	1 cut(s)	1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.