Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002865

Physical Location & Seq

Genomic Coordinates Reverse (-)

50864470 .. 50886282

Gene Structure 21813 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009316

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3288 bp

ATGCCAGCTACTCGCTATCTCTTTCGCTTCCGTTCGGTCGCCGCACCGGATTTGACGGTTTTCTTTTCCGGCGTCTATTCAACAGTTCGCAGATTTCATCCTTACAACGGTCCTAGTTCTCCGGCGGTCCCATTGGCGGGAAAGAAGTGGATACCACTGGACATTTTTATAACTAATCTTAACTATTTAAGTACTACAACACCAGCTCACAGAAGGATGAGTCACTCAAGAGGGTTGCCTTATAACACAAGCAATGATTTGGAGACCGGTCTGGAGGTTCCTGTTGAGCGCATGAACCGTTGGGTGCAAGCGAAACTACTTCATAAAGCATTATATCGATTCCGCCACACACTAGTCCTGAAAAGGGCAGAAGAAAAGAAGCAGGCGGCACGGAAACTTAGAGCACATGCCCAAGCCCTACGAGCTGCGGCTATCTTCAAAGAAGTTGCAGATCAAGTGAAAGGGACCGGTGATTATTTTCCAATTGAACCAGATGAACTTGCTAGTTTGATGAGGAATGGTGATGTTGATGCTCTGCAGCAATATGGGGGGAAGGAAGGCTTGGCAGATTTACTGAAAACAGATTTAGACAAAGGCATTGATGGGGATGATTTGCTAAAGCGGAGAATTAAATTTGGATCAAACATATATCCTCCAAAAACAGCAACGAGCCACTGGACATGTCTTCGGGAATCTCTGTACGATTTTACTCGGATCGTTTTGGTGATTGCTTTTATGGGTTCTGTTGTGATGGGTATTCTGGAAGAGACTAAAAAGCTGGGATGGCACGATGTGTTCAGCGTTGCTATTGCAGCTGCCATGTTCATTCTTATGACAGTCTTATCTGAGTATACTCAAGCTCGTCAGTTCCAGCATATGATTAGCAGGGAGGAAATCAAAAACATACAATCGAAGGTTATTAGAGCTGGTCGACAAGTTGTGGTTTCTAATTGTGATATTGTTGTTGGTGATGTTCTACCCCTTAAGACTGGTGATGAGGTCCTTGCTGATGGCATTTTAATCCGTGGTCGCTCACTTGCAATTGATAAGAGTAGAGTCACTGGAGAGAGCAAGATTTTTCACATGGATTCAAGGAACCCATTTCTACGGTCTGGCTGGAAAGTCGCACATGGCAGTGCTACTATGCTGGTAACTGGGGTTGGGAAATGTACTGAATCAGGAATTCTCAGGGCTAGCACGTATTCAAAAGACACAGAGAATAAAACCCCTTTGCAGGTGCATTTAAAGGAGGTTGCTACTTTCATGGGTGCTGTCGGATTCATGGGTGCTGCCATTGTTGCATATGTTGTTTGGTTCAGAGACTTCTTTACTGGTGATAATTCAAATGGAAGTCCTGAACCTGGAAGTACACTTGAAGAAGTGATTAGAATTAGTACCATTGCAGTCGCCATTTTTGTCGTTGCATTACCTGAAGTACTTCCTTCAGCTTTCAACATAACCCGTCTCAGCTCGATGAAAAAGATGAAGGCAGACAATTGCTTGGTGCGGAGGCCAGCTGTATGTGAAACCATGGCCTTATGCAATGATGCACTTTGTGACAAGACTGGAATAACTCTGAACCAGATGACTGTTTCTGAGGCCTATGCTGGTCAGAAGAAAATTAATTTTGCTGATAGCACAAGCAACTTGTCTCCGATATTATCGTCCTTACTCGTTGAAGGAATTGCTCAGAATACGAGTGGCAGTCTATCTGTGCTTGGGAGTGGTGATGTTCAGGCTTCTGGATCACCAATTGATAGGGCAATTCTGCACTGGGGAGTCAAGCTGGGGATGAATTTTGATGACATAACGTCTCAGTCTCCAGTTATGCAAGTTTTGCCATTCAGTTCAGAGAAAAAAAGAGGTGGTGTTGCACTTAATCTGACACATGGTCGAGTTCATGTACACTGGAAAGGGGAAGCTCAAGGAGTCTTAGCCTCATGTACAAGATACATTGGGGCTAATGATCAGGTTTTACCAATGGATGATGATGAGTTAACTTTTTTTCAAAAAGCTATCGAGGATATGGCTTCTGGAGGCTTGCATTGCGTTGCTATTGCATATACATCACTTGAATTGGAAAATGTTCTAATCAATAGTAATGGACAACTAGCGCAGTGGGAACTACCTGAGGATGACCTCATTTTACTAGCTATTGTTGGTATTAAGGATGATTGTCAACCGGGGATCAAGGACTCGGTGGAAATATTGCAAAGAGCTGGCATTAAGGTACGCCTTGTTACGCATGACAATCCTCAAACTGCAAAAGCACTTGCTAAGGAATGTAGCATACTTGCTTCTGATGGGTCAGACGCTAGTGAGGAAAATCTTATTGAAGGAAAAGTGTTCCGAGAACTTTCTGATATTCAGAGAGAAGAATTAGCAGAGAAGATTTTGGTAATGGCACGGTCTTCCCCCAATGACAAGCTTTTGCTTGTGCGAGCACTGCAGAAAAGAGGAAGGATTGTTGCTGTCACTGGATATGTCAGTAATGATGCTCATACACTACATGAGGCCGACATTGGTCTTGCTATGGGTATTCAAGGGACTGAAGTTGTTAAAGAGAGTTCAGATATCATAATCTTGGATGACAATTTTGCTACAGTAGCCAAGGGTTTCAGATGGGGACGATCTATACATGAAAAGGTTCTGAAAGTTATGCAGCAGCAACTTACAGCCAATATTGTAGCAGTAACTATAAACTGCATGGCGGCAGTTTACTATCGTCACATCCCGCTCAATGCTGTGCAGTTTGTGTGGGTGAATCTTATCATATTTGGTCTTGGACCACTAGCATTGACTACTGAATCTCCGGCTGATCACCTGATGAATGTACCCCCTATTGACCGAGGACAAACTATTATAAAATATATTCAGTGGAAGAGACTGTTGATACAGGTTCTCTACCAAATTATTGCCCTGCTTGTCATCAATTTTCAAGGAGGGAGTTTATTGAAAAATTATACCAGAGACCACGCCACAAAAGTGAAGAATACAATGATATTCAACACATTTGTTGTTTGCCAGATTTCCATTGAATTCGGAGTTCGAAAGACTGGTATAGTGGACCATCCTTTGAAATGGGTTACTGCTAACTCTGTGTTTCTGGGAATAGCTGGAATAATTCTTGTGATTCAGTTTATCATCATTGAGTTTCTTGGAAAGGCGTTTTTCATAGTTAGGCTTGACTGGAAAGAGTGGCAGTTTTCGCTGACTCTTGGTATTGTCGAGTTGTTGTTTGCACTGCTTCTATTTCTGAAGCACTTGACACAGAGGAATCATAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009506 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1096

Amino Acids

121.16

Weight (kDa)

8.61

Isoelectric Point (pI)

35.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	182 - 244	4.4e-09	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	302 - 394	2e-14	P-type ATPase actuator domain
Cation_ATPase	PF13246	559 - 728	5.1e-25	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	911 - 1081	2.1e-24	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002865)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06912
pyrus_communis	pycom14g06520
rosa_chinensis	RchiOBHm_Chr4g0398821 RchiOBHm_Chr4g0398831 RchiOBHm_Chr4g0398851 RchiOBHm_Chr4g0398861
rosa_laevigata	RLG00000009311 RLG00000009312 RLG00000009316
rosa_multiflora	Rmu_sc0002885.1_g000007 Rmu_sc0002885.1_g000009 Rmu_sc0004474.1_g000001 Rmu_sc0004751.1_g000005
rosa_roxburghii	Rroxscaffold_173G00435010 Rroxscaffold_5G00343860 Rroxscaffold_5G00343900 Rroxscaffold_5G00355000
rosa_rugosa	Rorug04G0012100 Rorug04G0012300 Rorug04G0012400 Rorug04G0012600
rosa_samantha	Rh4AG090100 Rh4AG090400 Rh4BG087200 Rh4BG087500 Rh4BG087600 Rh4BG087700 Rh4CG098200 Rh4CG098400 Rh4CG098700 Rh4DG081500 Rh4DG081600 Rh4DG081800 Rh4DG082000 Rh4DG082300 Rh4DG082700
rosa_wichuraiana	Rw4G007420 Rw4G007440 Rw4G007480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	170, 243, 2864
AarI	CACCTGC	1 cut(s)	1225
Acc36I	ACCTGC	1 cut(s)	1225
AccBSI	CCGCTC	1 cut(s)	2737
AccI	GTMKAC	2 cut(s)	851, 931
AclWI	GGATC	4 cut(s)	646, 722, 1753, 2195
AcsI	RAATTY	4 cut(s)	632, 1182, 1795, 3038
AcuI	CTGAAG	4 cut(s)	1428, 1452, 2571, 3278
AcyI	GRCGYC	1 cut(s)	72
AdeI	CACNNNGTG	2 cut(s)	793, 1556
AfiI	CCNNNNNNNGG	6 cut(s)	107, 136, 137, 364, 1234, 1361
AflII	CTTAAG	1 cut(s)	983
AflIII	ACRYGT	1 cut(s)	680
AgeI	ACCGGT	2 cut(s)	266, 467
AhdI	GACNNNNNGTC	2 cut(s)	1810, 1890
AhlI	ACTAGT	1 cut(s)	352
AjnI	CCWGG	1 cut(s)	1360
AjuI	GAANNNNNNNTTGG	2 cut(s)	545, 577
AleI	CACNNNNGTG	1 cut(s)	2984
Alw21I	GWGCWC	2 cut(s)	406, 2446
Alw26I	GTCTC	9 cut(s)	257, 761, 1314, 1469, 1656, 1818, 1824, 2878, 2964
AlwI	GGATC	4 cut(s)	646, 722, 1753, 2195
AoxI	GGCC	4 cut(s)	1511, 1533, 1599, 2514
ApeKI	GCWGC	7 cut(s)	425, 538, 812, 815, 1289, 2662, 2665
ApoI	RAATTY	4 cut(s)	632, 1182, 1795, 3038
AseI	ATTAAT	1 cut(s)	1623
AsiGI	ACCGGT	2 cut(s)	266, 467
Asp700I	GAANNNNTTC	3 cut(s)	1437, 2085, 2646
AspLEI	GCGC	2 cut(s)	291, 2116
AspS9I	GGNCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
AsuC2I	CCSGG	1 cut(s)	2184
AsuII	TTCGAA	1 cut(s)	3049
AsuNHI	GCTAGC	1 cut(s)	1193
AvaII	GGWCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
AxyI	CCTNAGG	1 cut(s)	2130
BbsI	GAAGAC	2 cut(s)	677, 2403
Bbv12I	GWGCWC	2 cut(s)	406, 2446
BbvI	GCAGC	7 cut(s)	412, 550, 802, 824, 1276, 2674, 2677
BccI	CCATC	7 cut(s)	596, 745, 777, 1004, 2297, 2616, 3078
BciT130I	CCWGG	1 cut(s)	1362
BciVI	GTATCC	1 cut(s)	144
BclI	TGATCA	2 cut(s)	1966, 2818
BcnI	CCSGG	1 cut(s)	2184
BcoDI	GTCTC	9 cut(s)	257, 761, 1314, 1469, 1656, 1818, 1824, 2878, 2964
BcuI	ACTAGT	1 cut(s)	352
BfaI	CTAG	8 cut(s)	114, 353, 504, 1194, 2111, 2150, 2316, 2792
BfmI	CTRYAG	3 cut(s)	536, 2447, 2601
BfrI	CTTAAG	1 cut(s)	983
BfuAI	ACCTGC	1 cut(s)	1225
BfuI	GTATCC	1 cut(s)	144
BmcAI	AGTACT	2 cut(s)	193, 1437
Bme1390I	CCNGG	2 cut(s)	1362, 2184
Bme18I	GGWCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
BmeRI	GACNNNNNGTC	2 cut(s)	1810, 1890
BmgT120I	GGNCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
BmiI	GGNNCC	4 cut(s)	129, 279, 466, 1097
BmrFI	CCNGG	2 cut(s)	1362, 2184
BmrI	ACTGGG	2 cut(s)	1164, 1783
BmsI	GCATC	3 cut(s)	520, 1537, 2485
BmtI	GCTAGC	1 cut(s)	1197
BmuI	ACTGGG	2 cut(s)	1164, 1783
BoxI	GACNNNNGTC	1 cut(s)	2523
BpiI	GAAGAC	2 cut(s)	677, 2403
BpmI	CTGGAG	4 cut(s)	293, 1083, 1806, 2055
Bpu10I	CCTNAGC	1 cut(s)	2277
Bpu14I	TTCGAA	1 cut(s)	3049
BpuEI	CTTGAG	3 cut(s)	211, 840, 1908
BpuMI	CCSGG	1 cut(s)	2184
Bsa29I	ATCGAT	1 cut(s)	337
BsaAI	YACGTR	1 cut(s)	1200
BsaHI	GRCGYC	1 cut(s)	72
BsaI	GGTCTC	2 cut(s)	257, 2964
BsaJI	CCNNGG	5 cut(s)	1024, 1530, 2183, 2610, 2848
BsaWI	WCCGGW	3 cut(s)	46, 266, 467
BsaXI	ACNNNNNCTCC	2 cut(s)	2794, 2824
Bsc4I	CCNNNNNNNGG	6 cut(s)	107, 136, 137, 364, 1234, 1361
Bse118I	RCCGGY	2 cut(s)	266, 467
Bse21I	CCTNAGG	1 cut(s)	2130
Bse3DI	GCAATG	4 cut(s)	259, 1398, 1549, 2044
BseBI	CCWGG	1 cut(s)	1362
BseCI	ATCGAT	1 cut(s)	337
BseDI	CCNNGG	5 cut(s)	1024, 1530, 2183, 2610, 2848
BseLI	CCNNNNNNNGG	6 cut(s)	107, 136, 137, 364, 1234, 1361
BseMI	GCAATG	4 cut(s)	259, 1398, 1549, 2044
BseMII	CTCAG	7 cut(s)	837, 1201, 1480, 1587, 1703, 1829, 2121
BseXI	GCAGC	7 cut(s)	412, 550, 802, 824, 1276, 2674, 2677
BseYI	CCCAGC	2 cut(s)	778, 1786
BsgI	GTGCAG	2 cut(s)	1754, 2768
Bsh1285I	CGRYCG	1 cut(s)	39
BshFI	GGCC	4 cut(s)	1513, 1535, 1601, 2516
BshTI	ACCGGT	2 cut(s)	266, 467
BshVI	ATCGAT	1 cut(s)	337
BsiEI	CGRYCG	1 cut(s)	39
BsiHKAI	GWGCWC	2 cut(s)	406, 2446
BsiSI	CCGG	7 cut(s)	47, 69, 122, 267, 468, 2183, 2813
BslFI	GGGAC	4 cut(s)	113, 478, 2560, 2640
BslI	CCNNNNNNNGG	6 cut(s)	107, 136, 137, 364, 1234, 1361
BsmAI	GTCTC	9 cut(s)	257, 761, 1314, 1469, 1656, 1818, 1824, 2878, 2964
BsmBI	CGTCTC	2 cut(s)	1469, 1818
BsmFI	GGGAC	4 cut(s)	113, 478, 2560, 2640
BsnI	GGCC	4 cut(s)	1513, 1535, 1601, 2516
Bso31I	GGTCTC	2 cut(s)	257, 2964
Bsp119I	TTCGAA	1 cut(s)	3049
Bsp1286I	GDGCHC	2 cut(s)	406, 2446
Bsp1407I	TGTACA	2 cut(s)	1903, 1943
Bsp143I	GATC	8 cut(s)	451, 638, 714, 1745, 1966, 2187, 2630, 2818
Bsp19I	CCATGG	1 cut(s)	1530
BspANI	GGCC	4 cut(s)	1513, 1535, 1601, 2516
BspCNI	CTCAG	7 cut(s)	838, 1200, 1479, 1588, 1702, 1828, 2122
BspDI	ATCGAT	1 cut(s)	337
BspLI	GGNNCC	4 cut(s)	129, 279, 466, 1097
BspMAI	CTGCAG	2 cut(s)	540, 2451
BspMI	ACCTGC	1 cut(s)	1225
BspOI	GCTAGC	1 cut(s)	1197
BspPI	GGATC	4 cut(s)	646, 722, 1753, 2195
BspT104I	TTCGAA	1 cut(s)	3049
BspTI	CTTAAG	1 cut(s)	983
BspTNI	GGTCTC	2 cut(s)	257, 2964
BsrBI	CCGCTC	1 cut(s)	2737
BsrDI	GCAATG	4 cut(s)	259, 1398, 1549, 2044
BsrFI	RCCGGY	2 cut(s)	266, 467
BsrGI	TGTACA	2 cut(s)	1903, 1943
BssAI	RCCGGY	2 cut(s)	266, 467
BssECI	CCNNGG	5 cut(s)	1024, 1530, 2183, 2610, 2848
BssMI	GATC	8 cut(s)	451, 638, 714, 1745, 1966, 2187, 2630, 2818
BssNAI	GTATAC	1 cut(s)	852
BssNI	GRCGYC	1 cut(s)	72
BssT1I	CCWWGG	2 cut(s)	1530, 2610
Bst1107I	GTATAC	1 cut(s)	852
Bst2UI	CCWGG	1 cut(s)	1362
Bst6I	CTCTTC	2 cut(s)	759, 2876
BstACI	GRCGYC	1 cut(s)	72
BstAFI	CTTAAG	1 cut(s)	983
BstAPI	GCANNNNNTGC	1 cut(s)	1837
BstAUI	TGTACA	2 cut(s)	1903, 1943
BstBAI	YACGTR	1 cut(s)	1200
BstBI	TTCGAA	1 cut(s)	3049
BstC8I	GCNNGC	8 cut(s)	6, 309, 384, 1195, 1515, 2042, 2221, 2442
BstDSI	CCRYGG	2 cut(s)	1024, 1530
BstHHI	GCGC	2 cut(s)	291, 2116
BstKTI	GATC	8 cut(s)	454, 641, 717, 1748, 1969, 2190, 2633, 2821
BstMAI	GTCTC	9 cut(s)	257, 761, 1314, 1469, 1656, 1818, 1824, 2878, 2964
BstMBI	GATC	8 cut(s)	451, 638, 714, 1745, 1966, 2187, 2630, 2818
BstMCI	CGRYCG	1 cut(s)	39
BstMWI	GCNNNNNNNGC	9 cut(s)	422, 784, 812, 1298, 1837, 2046, 2446, 2606, 3208
BstNI	CCWGG	1 cut(s)	1362
BstNSI	RCATGY	2 cut(s)	410, 684
BstPAI	GACNNNNGTC	1 cut(s)	2523
BstSCI	CCNGG	2 cut(s)	1360, 2182
BstSFI	CTRYAG	3 cut(s)	536, 2447, 2601
BstV1I	GCAGC	7 cut(s)	412, 550, 802, 824, 1276, 2674, 2677
BstV2I	GAAGAC	2 cut(s)	677, 2403
BstZ17I	GTATAC	1 cut(s)	852
Bsu15I	ATCGAT	1 cut(s)	337
Bsu36I	CCTNAGG	1 cut(s)	2130
BsuI	GTATCC	1 cut(s)	144
BsuRI	GGCC	4 cut(s)	1513, 1535, 1601, 2516
BsuTUI	ATCGAT	1 cut(s)	337
BtgI	CCRYGG	2 cut(s)	1024, 1530
BtsI	GCAGTG	4 cut(s)	1141, 2123, 2444, 3242
BveI	ACCTGC	1 cut(s)	1225
Cac8I	GCNNGC	8 cut(s)	6, 309, 384, 1195, 1515, 2042, 2221, 2442
CfoI	GCGC	2 cut(s)	291, 2116
Cfr10I	RCCGGY	2 cut(s)	266, 467
Cfr13I	GGNCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
ClaI	ATCGAT	1 cut(s)	337
CseI	GACGC	2 cut(s)	61, 2321
CspAI	ACCGGT	2 cut(s)	266, 467
CspCI	CAANNNNNGTGG	2 cut(s)	2778, 2813
DpnI	GATC	8 cut(s)	453, 640, 716, 1747, 1968, 2189, 2632, 2820
DpnII	GATC	8 cut(s)	451, 638, 714, 1745, 1966, 2187, 2630, 2818
DraI	TTTAAA	1 cut(s)	1245
DraIII	CACNNNGTG	2 cut(s)	793, 1556
DriI	GACNNNNNGTC	2 cut(s)	1810, 1890
Eam1104I	CTCTTC	2 cut(s)	759, 2876
Eam1105I	GACNNNNNGTC	2 cut(s)	1810, 1890
EarI	CTCTTC	2 cut(s)	759, 2876
EciI	GGCGGA	1 cut(s)	332
Eco130I	CCWWGG	2 cut(s)	1530, 2610
Eco147I	AGGCCT	1 cut(s)	1601
Eco31I	GGTCTC	2 cut(s)	257, 2964
Eco32I	GATATC	1 cut(s)	2575
Eco47I	GGWCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
Eco57I	CTGAAG	4 cut(s)	1428, 1452, 2571, 3278
Eco81I	CCTNAGG	1 cut(s)	2130
EcoO109I	RGGNCCY	1 cut(s)	1000
EcoRI	GAATTC	2 cut(s)	1182, 3038
EcoRII	CCWGG	1 cut(s)	1360
EcoRV	GATATC	1 cut(s)	2575
EcoT14I	CCWWGG	2 cut(s)	1530, 2610
ErhI	CCWWGG	2 cut(s)	1530, 2610
Esp3I	CGTCTC	2 cut(s)	1469, 1818
FalI	AAGNNNNNCTT	2 cut(s)	545, 577
FaqI	GGGAC	4 cut(s)	113, 478, 2560, 2640
FauI	CCCGC	2 cut(s)	130, 2742
FauNDI	CATATG	2 cut(s)	876, 1303
FbaI	TGATCA	2 cut(s)	1966, 2818
FblI	GTMKAC	2 cut(s)	851, 931
FspBI	CTAG	8 cut(s)	114, 353, 504, 1194, 2111, 2150, 2316, 2792
GlaI	GCGC	2 cut(s)	290, 2115
GsaI	CCCAGC	2 cut(s)	782, 1790
GsuI	CTGGAG	4 cut(s)	293, 1083, 1806, 2055
HaeIII	GGCC	4 cut(s)	1513, 1535, 1601, 2516
HapII	CCGG	7 cut(s)	47, 69, 122, 267, 468, 2183, 2813
HgaI	GACGC	2 cut(s)	61, 2321
HhaI	GCGC	2 cut(s)	291, 2116
Hin1I	GRCGYC	1 cut(s)	72
Hin6I	GCGC	2 cut(s)	289, 2114
HinP1I	GCGC	2 cut(s)	289, 2114
HincII	GTYRAC	3 cut(s)	932, 1998, 2180
HindII	GTYRAC	3 cut(s)	932, 1998, 2180
HindIII	AAGCTT	1 cut(s)	2426
HpaI	GTTAAC	1 cut(s)	1998
HpaII	CCGG	7 cut(s)	47, 69, 122, 267, 468, 2183, 2813
Hpy166II	GTNNAC	8 cut(s)	852, 932, 1370, 1906, 1998, 2180, 2719, 3067
Hpy188III	TCNNGA	9 cut(s)	228, 272, 358, 689, 761, 1179, 1355, 1743, 2034
Hpy8I	GTNNAC	8 cut(s)	852, 932, 1370, 1906, 1998, 2180, 2719, 3067
HpyAV	CCTTC	9 cut(s)	207, 547, 551, 907, 1452, 1480, 1673, 2330, 2454
HpyCH4IV	ACGT	2 cut(s)	1199, 1811
HpyF10VI	GCNNNNNNNGC	9 cut(s)	422, 784, 812, 1298, 1837, 2046, 2446, 2606, 3208
HpySE526I	ACGT	2 cut(s)	1199, 1811
Hsp92I	GRCGYC	1 cut(s)	72
HspAI	GCGC	2 cut(s)	289, 2114
Ksp22I	TGATCA	2 cut(s)	1966, 2818
KspAI	GTTAAC	1 cut(s)	1998
Kzo9I	GATC	8 cut(s)	451, 638, 714, 1745, 1966, 2187, 2630, 2818
Lsp1109I	GCAGC	7 cut(s)	412, 550, 802, 824, 1276, 2674, 2677
LweI	GCATC	3 cut(s)	520, 1537, 2485
MaeI	CTAG	8 cut(s)	114, 353, 504, 1194, 2111, 2150, 2316, 2792
MaeII	ACGT	2 cut(s)	1199, 1811
MaeIII	GTNAC	9 cut(s)	221, 1057, 1150, 1556, 2239, 2473, 2692, 2726, 3085
MalI	GATC	8 cut(s)	453, 640, 716, 1747, 1968, 2189, 2632, 2820
MbiI	CCGCTC	1 cut(s)	2737
MboI	GATC	8 cut(s)	451, 638, 714, 1745, 1966, 2187, 2630, 2818
MfeI	CAATTG	4 cut(s)	483, 1041, 1495, 1752
MhlI	GDGCHC	2 cut(s)	406, 2446
MlyI	GAGTC	6 cut(s)	229, 1065, 1788, 1938, 2189, 3208
MmeI	TCCRAC	1 cut(s)	1255
MroXI	GAANNNNTTC	3 cut(s)	1437, 2085, 2646
MslI	CAYNNNNRTG	3 cut(s)	830, 1134, 2984
MspA1I	CMGCKG	2 cut(s)	815, 1517
MspCI	CTTAAG	1 cut(s)	983
MspI	CCGG	7 cut(s)	47, 69, 122, 267, 468, 2183, 2813
MspR9I	CCNGG	2 cut(s)	1362, 2184
MunI	CAATTG	4 cut(s)	483, 1041, 1495, 1752
MvaI	CCWGG	1 cut(s)	1362
MwoI	GCNNNNNNNGC	9 cut(s)	422, 784, 812, 1298, 1837, 2046, 2446, 2606, 3208
NciI	CCSGG	1 cut(s)	2184
NcoI	CCATGG	1 cut(s)	1530
NdeI	CATATG	2 cut(s)	876, 1303
NdeII	GATC	8 cut(s)	451, 638, 714, 1745, 1966, 2187, 2630, 2818
NheI	GCTAGC	1 cut(s)	1193
NlaIV	GGNNCC	4 cut(s)	129, 279, 466, 1097
NmuCI	GTSAC	5 cut(s)	221, 1057, 1556, 2473, 2726
NspI	RCATGY	2 cut(s)	410, 684
NspV	TTCGAA	1 cut(s)	3049
OliI	CACNNNNGTG	1 cut(s)	2984
PaqCI	CACCTGC	1 cut(s)	1225
PceI	AGGCCT	1 cut(s)	1601
PciI	ACATGT	1 cut(s)	680
PdmI	GAANNNNTTC	3 cut(s)	1437, 2085, 2646
PfeI	GAWTC	9 cut(s)	339, 692, 1088, 1175, 1278, 2764, 2807, 3133, 3277
PinAI	ACCGGT	2 cut(s)	266, 467
PleI	GAGTC	6 cut(s)	228, 1064, 1787, 1937, 2189, 3208
PpsI	GAGTC	6 cut(s)	228, 1064, 1787, 1937, 2189, 3208
Ppu21I	YACGTR	1 cut(s)	1200
PpuMI	RGGWCCY	1 cut(s)	1000
PscI	ACATGT	1 cut(s)	680
PshAI	GACNNNNGTC	1 cut(s)	2523
PshBI	ATTAAT	1 cut(s)	1623
PsiI	TTATAA	3 cut(s)	170, 243, 2864
Psp5II	RGGWCCY	1 cut(s)	1000
Psp6I	CCWGG	1 cut(s)	1360
PspFI	CCCAGC	2 cut(s)	778, 1786
PspGI	CCWGG	1 cut(s)	1360
PspN4I	GGNNCC	4 cut(s)	129, 279, 466, 1097
PspPI	GGNCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
PspPPI	RGGWCCY	1 cut(s)	1000
PstI	CTGCAG	2 cut(s)	540, 2451
PvuII	CAGCTG	2 cut(s)	815, 1517
RseI	CAYNNNNRTG	3 cut(s)	830, 1134, 2984
SalI	GTCGAC	1 cut(s)	930
Sau3AI	GATC	8 cut(s)	451, 638, 714, 1745, 1966, 2187, 2630, 2818
Sau96I	GGNCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
ScaI	AGTACT	2 cut(s)	193, 1437
SchI	GAGTC	6 cut(s)	229, 1065, 1788, 1938, 2189, 3208
ScrFI	CCNGG	2 cut(s)	1362, 2184
SduI	GDGCHC	2 cut(s)	406, 2446
SfaNI	GCATC	3 cut(s)	520, 1537, 2485
SfcI	CTRYAG	3 cut(s)	536, 2447, 2601
SfuI	TTCGAA	1 cut(s)	3049
SinI	GGWCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
SmiMI	CAYNNNNRTG	3 cut(s)	830, 1134, 2984
SmlI	CTYRAG	4 cut(s)	226, 855, 983, 1923
SmoI	CTYRAG	4 cut(s)	226, 855, 983, 1923
SpeI	ACTAGT	1 cut(s)	352
SseBI	AGGCCT	1 cut(s)	1601
SspI	AATATT	2 cut(s)	2208, 2683
SspMI	CTAG	8 cut(s)	114, 353, 504, 1194, 2111, 2150, 2316, 2792
StuI	AGGCCT	1 cut(s)	1601
StyD4I	CCNGG	2 cut(s)	1360, 2182
StyI	CCWWGG	2 cut(s)	1530, 2610
TaiI	ACGT	2 cut(s)	1202, 1814
TaqI	TCGA	8 cut(s)	337, 911, 931, 1472, 1894, 2019, 3049, 3228
TaqII	GACCGA	2 cut(s)	25, 2862
TatI	WGTACW	6 cut(s)	191, 1169, 1367, 1435, 1903, 1943
TauI	GCSGC	4 cut(s)	44, 389, 431, 2714
TfiI	GAWTC	9 cut(s)	339, 692, 1088, 1175, 1278, 2764, 2807, 3133, 3277
TseFI	GTSAC	5 cut(s)	221, 1057, 1556, 2473, 2726
TseI	GCWGC	7 cut(s)	425, 538, 812, 815, 1289, 2662, 2665
Tsp45I	GTSAC	5 cut(s)	221, 1057, 1556, 2473, 2726
TspGWI	ACGGA	3 cut(s)	20, 406, 1013
Vha464I	CTTAAG	1 cut(s)	983
VpaK11BI	GGWCC	6 cut(s)	110, 127, 465, 1000, 2786, 3067
VspI	ATTAAT	1 cut(s)	1623
XapI	RAATTY	4 cut(s)	632, 1182, 1795, 3038
XceI	RCATGY	2 cut(s)	410, 684
XmiI	GTMKAC	2 cut(s)	851, 931
XmnI	GAANNNNTTC	3 cut(s)	1437, 2085, 2646
XspI	CTAG	8 cut(s)	114, 353, 504, 1194, 2111, 2150, 2316, 2792
ZrmI	AGTACT	2 cut(s)	193, 1437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.