Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004474.1

Orthogroup ID

OG0002865

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 11726

Gene Structure 11726 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004474.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2358 bp

caagcgaagctatatctgaaagcattgtaccgattcagccacatactagtcctgaaaagggcagaagaaaagaaacaggcagcactgaaactaattagagcacatacccaagccctacgagctgcggatatcttaaaaaaaattgcagatcatcaagtgaaagggcctggtgatgattttccaattgaaccagagacacttgctagtttgacgaggaatagtgatattgatgctctgcagcgatatggggggaaagaaggcttggcagatttactgaaaacaaatttagacaagggaattgatgggggtgatttgcaaaagcggagagataaatttggatcaaacaaaaatcctccaaaaacagcgacaagccactggatatgtctttggaaagctctgtacgatttcactcggatcgttttggtgaatgcttttgtgggttctgttgtgatgggtattatggaagagactaaaaaggtgggatggcacgatgtattcagcgttgctattgcagctgccatgttcatttttttcacagtcttatctaactatactcaagctcgtcttcagcatatgatcattatcagggagaaaatgagatacagagaattattgaaggttattagagctgatcgacaagttccattttctatttatgagattgttgttggtgatgttataccccttgagtctggtgatgaggtccctgctgatggcattttaatccgtggttgctcatcacttgcaattgataagtccagagtcactggagagagcatgacttttgacgaggattcaaggaaaccatttctactgtctggctggaaagtaacacagggcagtgctactatgctggtaactggggtagggaaatttactgaattgggaaggctcagggctagcgccgattcaaaagacacggagaaacggaagaataaaacccacttgcaggtgcttttaaaggaggttgctaccttcatgggtgctgtcggattcatggttgctgccattgttgcatatgttgtttggatcagaggcttctttactggtgatagttcaaatggaagtcgtgaacctggaagtacagttgaagaagtcattcgaattagtattattgcagtcgccatttttgtcgtttcattacctgaagtgcttcctttagctttcaacataagccgtctcagctcaatgaaaaagatgaaggcagacaacatctcggtgcggaggccagctgtatgtgaaaccatggccttatgcactgatgtagtctgtgacatgactggaattactttggccaacgtggatgatgttcaagcggggatcaaggaaatacaaagagctcgcattaaggtacacattgttacgcatgacaatcctgaaactgcagaagcaattgctatggaatgtggcatacttgcttctaatgggtcagatgctagtgaggtaaaccttattgttgaaggagaagtgttccgagaccttcctgatagtgggagagaagaattagcagagaagattttggtaatgcgactgtctacccccgatgacaaacttttgcttgtgcaagcactgcggaaaagagaaaaggttgttgctgtcactggatctgtcattagtgatgctggtgcactacaagaggccgacattggtcttgctatgggtgaacaagcggatgaagttgctaaggagagttcagatatcataatcttggatggcaatttcgctactgtagccaagggtttcaaatggggacgatctatgcatgaaaaggttctgagagtgatgcagcagcaacttacagccaatattgtagcggtaactataaactgcttggcggcagtttactatggtcacattccgctcaatgctgtgcagtttgtgtgggtgaatgttatcatatttggtcttggaccactaatattggcaactgaatatccggctgaacgcctgatggacgaaccccctattgaccgaggacaaccccttataaaatatattcggtggaagagactgttgatacaggttctgtaccaaattattgccctgcttgtcatcaattttcaaggagggagtttactgaaaaattataccagagaccacgccatcaaagtgaaaaatacaatgatattcaacacatttgttatatgtcagatttccattgaattcggagttcgaaagactggtatactggaccatcctttgaaatggattactgccaactccgtgtttctgggaatagtgggaataattcttgtgattcagtttatcatcattgagtttcttgggaaggcgtttttcgtagtcaggcttgactggaaagagtggcagttttccctcactcttggaattgtcgagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009506 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

785

Amino Acids

87.14

Weight (kDa)

8.63

Isoelectric Point (pI)

29.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002865)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06912
pyrus_communis	pycom14g06520
rosa_chinensis	RchiOBHm_Chr4g0398821 RchiOBHm_Chr4g0398831 RchiOBHm_Chr4g0398851 RchiOBHm_Chr4g0398861
rosa_laevigata	RLG00000009311 RLG00000009312 RLG00000009316
rosa_multiflora	Rmu_sc0002885.1_g000007 Rmu_sc0002885.1_g000009 Rmu_sc0004474.1_g000001 Rmu_sc0004751.1_g000005
rosa_roxburghii	Rroxscaffold_173G00435010 Rroxscaffold_5G00343860 Rroxscaffold_5G00343900 Rroxscaffold_5G00355000
rosa_rugosa	Rorug04G0012100 Rorug04G0012300 Rorug04G0012400 Rorug04G0012600
rosa_samantha	Rh4AG090100 Rh4AG090400 Rh4BG087200 Rh4BG087500 Rh4BG087600 Rh4BG087700 Rh4CG098200 Rh4CG098400 Rh4CG098700 Rh4DG081500 Rh4DG081600 Rh4DG081800 Rh4DG082000 Rh4DG082300 Rh4DG082700
rosa_wichuraiana	Rw4G007420 Rw4G007440 Rw4G007480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1988
AarI	CACCTGC	1 cut(s)	940
Acc36I	ACCTGC	1 cut(s)	940
AccBSI	CCGCTC	1 cut(s)	1861
AccI	GTMKAC	2 cut(s)	1535, 2185
AciI	CCGC	9 cut(s)	125, 322, 1222, 1316, 1573, 1670, 1814, 1835, 1859
AclWI	GGATC	5 cut(s)	346, 422, 1037, 1328, 1612
AcoI	YGGCCR	1 cut(s)	1293
AcsI	RAATTY	4 cut(s)	283, 332, 872, 2162
AcuI	CTGAAG	2 cut(s)	551, 1167
AfaI	GTAC	5 cut(s)	29, 401, 1084, 1353, 2030
AfiI	CCNNNNNNNGG	4 cut(s)	58, 713, 949, 1490
AhlI	ACTAGT	1 cut(s)	46
AjnI	CCWGG	2 cut(s)	166, 1075
AjuI	GAANNNNNNNTTGG	2 cut(s)	245, 277
Alw21I	GWGCWC	3 cut(s)	103, 1342, 1630
Alw26I	GTCTC	6 cut(s)	188, 461, 1184, 1470, 2002, 2088
Alw44I	GTGCAC	1 cut(s)	1626
AlwI	GGATC	5 cut(s)	346, 422, 1037, 1328, 1612
AlwNI	CAGNNNCTG	1 cut(s)	2026
AoxI	GGCC	5 cut(s)	164, 1226, 1248, 1293, 1638
ApaLI	GTGCAC	1 cut(s)	1626
ApeKI	GCWGC	8 cut(s)	80, 122, 238, 512, 515, 1004, 1786, 1789
ApoI	RAATTY	4 cut(s)	283, 332, 872, 2162
Asp700I	GAANNNNTTC	3 cut(s)	1098, 1152, 1770
AspLEI	GCGC	1 cut(s)	905
AspS9I	GGNCC	4 cut(s)	164, 703, 1910, 2191
AsuHPI	GGTGA	8 cut(s)	182, 320, 436, 683, 707, 1061, 1673, 1897
AsuII	TTCGAA	2 cut(s)	1102, 2173
AsuNHI	GCTAGC	1 cut(s)	899
AvaII	GGWCC	3 cut(s)	703, 1910, 2191
BaeGI	GKGCMC	1 cut(s)	1630
BalI	TGGCCA	1 cut(s)	1295
BanII	GRGCYC	1 cut(s)	1342
BbsI	GAAGAC	1 cut(s)	557
Bbv12I	GWGCWC	3 cut(s)	103, 1342, 1630
BbvI	GCAGC	8 cut(s)	92, 109, 250, 502, 524, 991, 1798, 1801
BccI	CCATC	8 cut(s)	296, 445, 477, 707, 1706, 1945, 2111, 2202
BceAI	ACGGC	1 cut(s)	1161
BciT130I	CCWGG	2 cut(s)	168, 1077
BclI	TGATCA	1 cut(s)	576
BcoDI	GTCTC	6 cut(s)	188, 461, 1184, 1470, 2002, 2088
BcuI	ACTAGT	1 cut(s)	46
BfaI	CTAG	4 cut(s)	47, 204, 900, 1437
BfmI	CTRYAG	3 cut(s)	236, 1383, 1728
BfoI	RGCGCY	1 cut(s)	906
BfuAI	ACCTGC	1 cut(s)	940
BisI	GCNGC	9 cut(s)	81, 123, 239, 513, 516, 1005, 1787, 1790, 1836
BlsI	GCNGC	9 cut(s)	82, 124, 240, 514, 517, 1006, 1788, 1791, 1837
Bme1390I	CCNGG	2 cut(s)	168, 1077
Bme18I	GGWCC	3 cut(s)	703, 1910, 2191
BmgT120I	GGNCC	4 cut(s)	164, 703, 1910, 2191
BmiI	GGNNCC	1 cut(s)	705
BmrFI	CCNGG	2 cut(s)	168, 1077
BmrI	ACTGGG	1 cut(s)	870
BmsI	GCATC	4 cut(s)	220, 1423, 1609, 1773
BmtI	GCTAGC	1 cut(s)	903
BmuI	ACTGGG	1 cut(s)	870
BoxI	GACNNNNGTC	1 cut(s)	1647
BpiI	GAAGAC	1 cut(s)	557
BpmI	CTGGAG	1 cut(s)	789
Bpu10I	CCTNAGC	2 cut(s)	893, 1683
Bpu14I	TTCGAA	2 cut(s)	1102, 2173
BpuEI	CTTGAG	2 cut(s)	540, 707
BsaBI	GATNNNNATC	1 cut(s)	581
BsaI	GGTCTC	2 cut(s)	1470, 2088
BsaJI	CCNNGG	4 cut(s)	727, 1245, 1734, 1972
Bsc4I	CCNNNNNNNGG	4 cut(s)	58, 713, 949, 1490
Bse1I	ACTGG	9 cut(s)	380, 772, 865, 1051, 1285, 1606, 2185, 2193, 2318
Bse8I	GATNNNNATC	1 cut(s)	581
BseBI	CCWGG	2 cut(s)	168, 1077
BseDI	CCNNGG	4 cut(s)	727, 1245, 1734, 1972
BseGI	GGATG	5 cut(s)	488, 1309, 1678, 1717, 2194
BseJI	GATNNNNATC	1 cut(s)	581
BseLI	CCNNNNNNNGG	4 cut(s)	58, 713, 949, 1490
BseMII	CTCAG	3 cut(s)	907, 1195, 1766
BseNI	ACTGG	9 cut(s)	380, 772, 865, 1051, 1285, 1606, 2185, 2193, 2318
BseSI	GKGCMC	1 cut(s)	1630
BseXI	GCAGC	8 cut(s)	92, 109, 250, 502, 524, 991, 1798, 1801
BsgI	GTGCAG	1 cut(s)	1892
BshFI	GGCC	5 cut(s)	166, 1228, 1250, 1295, 1640
BsiHKAI	GWGCWC	3 cut(s)	103, 1342, 1630
BsiSI	CCGG	1 cut(s)	1937
BslFI	GGGAC	2 cut(s)	689, 1764
BslI	CCNNNNNNNGG	4 cut(s)	58, 713, 949, 1490
BsmAI	GTCTC	6 cut(s)	188, 461, 1184, 1470, 2002, 2088
BsmBI	CGTCTC	1 cut(s)	1184
BsmFI	GGGAC	2 cut(s)	689, 1764
BsmI	GAATGC	1 cut(s)	433
BsnI	GGCC	5 cut(s)	166, 1228, 1250, 1295, 1640
Bso31I	GGTCTC	2 cut(s)	1470, 2088
Bsp119I	TTCGAA	2 cut(s)	1102, 2173
Bsp1286I	GDGCHC	3 cut(s)	103, 1342, 1630
Bsp143I	GATC	9 cut(s)	148, 338, 414, 576, 631, 1029, 1320, 1604, 1754
Bsp19I	CCATGG	1 cut(s)	1245
BspACI	CCGC	9 cut(s)	125, 322, 1222, 1316, 1573, 1670, 1814, 1835, 1859
BspANI	GGCC	5 cut(s)	166, 1228, 1250, 1295, 1640
BspCNI	CTCAG	3 cut(s)	906, 1194, 1767
BspLI	GGNNCC	1 cut(s)	705
BspMAI	CTGCAG	2 cut(s)	240, 1387
BspMI	ACCTGC	1 cut(s)	940
BspOI	GCTAGC	1 cut(s)	903
BspPI	GGATC	5 cut(s)	346, 422, 1037, 1328, 1612
BspT104I	TTCGAA	2 cut(s)	1102, 2173
BspTNI	GGTCTC	2 cut(s)	1470, 2088
BsrBI	CCGCTC	1 cut(s)	1861
BsrI	ACTGG	9 cut(s)	380, 772, 865, 1051, 1285, 1606, 2185, 2193, 2318
BssECI	CCNNGG	4 cut(s)	727, 1245, 1734, 1972
BssMI	GATC	9 cut(s)	148, 338, 414, 576, 631, 1029, 1320, 1604, 1754
BssNAI	GTATAC	1 cut(s)	2186
BssT1I	CCWWGG	2 cut(s)	1245, 1734
Bst1107I	GTATAC	1 cut(s)	2186
Bst2UI	CCWGG	2 cut(s)	168, 1077
Bst4CI	ACNGT	6 cut(s)	538, 816, 1087, 1533, 1729, 2013
Bst6I	CTCTTC	2 cut(s)	459, 2000
BstAPI	GCANNNNNTGC	1 cut(s)	1570
BstBI	TTCGAA	2 cut(s)	1102, 2173
BstC8I	GCNNGC	4 cut(s)	901, 1230, 1342, 1566
BstDEI	CTNAG	4 cut(s)	893, 1181, 1683, 1775
BstDSI	CCRYGG	2 cut(s)	727, 1245
BstF5I	GGATG	5 cut(s)	488, 1309, 1678, 1717, 2194
BstH2I	RGCGCY	1 cut(s)	906
BstHHI	GCGC	1 cut(s)	905
BstKTI	GATC	9 cut(s)	151, 341, 417, 579, 634, 1032, 1323, 1607, 1757
BstMAI	GTCTC	6 cut(s)	188, 461, 1184, 1470, 2002, 2088
BstMBI	GATC	9 cut(s)	148, 338, 414, 576, 631, 1029, 1320, 1604, 1754
BstMWI	GCNNNNNNNGC	6 cut(s)	119, 512, 1013, 1182, 1570, 1730
BstNI	CCWGG	2 cut(s)	168, 1077
BstPAI	GACNNNNGTC	1 cut(s)	1647
BstSCI	CCNGG	2 cut(s)	166, 1075
BstSFI	CTRYAG	3 cut(s)	236, 1383, 1728
BstSLI	GKGCMC	1 cut(s)	1630
BstV1I	GCAGC	8 cut(s)	92, 109, 250, 502, 524, 991, 1798, 1801
BstV2I	GAAGAC	1 cut(s)	557
BstX2I	RGATCY	1 cut(s)	1604
BstYI	RGATCY	1 cut(s)	1604
BstZ17I	GTATAC	1 cut(s)	2186
BsuRI	GGCC	5 cut(s)	166, 1228, 1250, 1295, 1640
BtgI	CCRYGG	2 cut(s)	727, 1245
BtsCI	GGATG	5 cut(s)	488, 1309, 1678, 1717, 2194
BtsI	GCAGTG	2 cut(s)	847, 1568
BtsIMutI	CAGTG	7 cut(s)	83, 373, 765, 847, 1257, 1568, 1599
BveI	ACCTGC	1 cut(s)	940
Cac8I	GCNNGC	4 cut(s)	901, 1230, 1342, 1566
CaiI	CAGNNNCTG	1 cut(s)	2026
CfoI	GCGC	1 cut(s)	905
Cfr13I	GGNCC	4 cut(s)	164, 703, 1910, 2191
Csp6I	GTAC	5 cut(s)	28, 400, 1083, 1352, 2029
CspCI	CAANNNNNGTGG	2 cut(s)	1902, 1937
CviAII	CATG	8 cut(s)	520, 778, 979, 997, 1246, 1276, 1367, 1763
CviQI	GTAC	5 cut(s)	28, 400, 1083, 1352, 2029
DdeI	CTNAG	4 cut(s)	893, 1181, 1683, 1775
DpnI	GATC	9 cut(s)	150, 340, 416, 578, 633, 1031, 1322, 1606, 1756
DpnII	GATC	9 cut(s)	148, 338, 414, 576, 631, 1029, 1320, 1604, 1754
DraI	TTTAAA	1 cut(s)	960
EaeI	YGGCCR	1 cut(s)	1293
Eam1104I	CTCTTC	2 cut(s)	459, 2000
EarI	CTCTTC	2 cut(s)	459, 2000
Ecl136II	GAGCTC	1 cut(s)	1340
Eco130I	CCWWGG	2 cut(s)	1245, 1734
Eco24I	GRGCYC	1 cut(s)	1342
Eco31I	GGTCTC	2 cut(s)	1470, 2088
Eco32I	GATATC	2 cut(s)	130, 1699
Eco47I	GGWCC	3 cut(s)	703, 1910, 2191
Eco53kI	GAGCTC	1 cut(s)	1340
Eco57I	CTGAAG	2 cut(s)	551, 1167
EcoICRI	GAGCTC	1 cut(s)	1340
EcoO109I	RGGNCCY	2 cut(s)	164, 703
EcoRI	GAATTC	1 cut(s)	2162
EcoRII	CCWGG	2 cut(s)	166, 1075
EcoRV	GATATC	2 cut(s)	130, 1699
EcoT14I	CCWWGG	2 cut(s)	1245, 1734
EcoT22I	ATGCAT	1 cut(s)	1764
EcoT38I	GRGCYC	1 cut(s)	1342
ErhI	CCWWGG	2 cut(s)	1245, 1734
Esp3I	CGTCTC	1 cut(s)	1184
FaeI	CATG	8 cut(s)	523, 781, 982, 1000, 1249, 1279, 1370, 1766
FalI	AAGNNNNNCTT	2 cut(s)	549, 581
FaqI	GGGAC	2 cut(s)	689, 1764
FatI	CATG	8 cut(s)	519, 777, 978, 996, 1245, 1275, 1366, 1762
FauI	CCCGC	1 cut(s)	1309
FauNDI	CATATG	2 cut(s)	573, 1018
FbaI	TGATCA	1 cut(s)	576
FblI	GTMKAC	2 cut(s)	1535, 2185
Fnu4HI	GCNGC	9 cut(s)	81, 123, 239, 513, 516, 1005, 1787, 1790, 1836
FokI	GGATG	5 cut(s)	495, 1316, 1685, 1724, 2181
FriOI	GRGCYC	1 cut(s)	1342
Fsp4HI	GCNGC	9 cut(s)	81, 123, 239, 513, 516, 1005, 1787, 1790, 1836
FspBI	CTAG	4 cut(s)	47, 204, 900, 1437
GlaI	GCGC	1 cut(s)	904
GluI	GCNGC	9 cut(s)	81, 123, 239, 513, 516, 1005, 1787, 1790, 1836
GsuI	CTGGAG	1 cut(s)	789
HaeII	RGCGCY	1 cut(s)	906
HaeIII	GGCC	5 cut(s)	166, 1228, 1250, 1295, 1640
HapII	CCGG	1 cut(s)	1937
HhaI	GCGC	1 cut(s)	905
Hin1II	CATG	8 cut(s)	523, 781, 982, 1000, 1249, 1279, 1370, 1766
Hin6I	GCGC	1 cut(s)	903
HinP1I	GCGC	1 cut(s)	903
HinfI	GANTC	7 cut(s)	33, 689, 762, 794, 908, 993, 2257
HpaII	CCGG	1 cut(s)	1937
HphI	GGTGA	8 cut(s)	182, 320, 436, 683, 707, 1061, 1673, 1897
Hpy166II	GTNNAC	9 cut(s)	1073, 1354, 1447, 1536, 1628, 1664, 1843, 2075, 2186
Hpy188III	TCNNGA	5 cut(s)	52, 759, 1070, 1376, 1484
Hpy8I	GTNNAC	9 cut(s)	1073, 1354, 1447, 1536, 1628, 1664, 1843, 2075, 2186
HpyAV	CCTTC	8 cut(s)	251, 610, 882, 985, 1195, 1454, 1490, 2281
HpyCH4III	ACNGT	6 cut(s)	538, 816, 1087, 1533, 1729, 2013
HpyCH4IV	ACGT	1 cut(s)	1299
HpyF10VI	GCNNNNNNNGC	6 cut(s)	119, 512, 1013, 1182, 1570, 1730
HpyF3I	CTNAG	4 cut(s)	893, 1181, 1683, 1775
HpySE526I	ACGT	1 cut(s)	1299
Hsp92II	CATG	8 cut(s)	523, 781, 982, 1000, 1249, 1279, 1370, 1766
HspAI	GCGC	1 cut(s)	903
Ksp22I	TGATCA	1 cut(s)	576
Kzo9I	GATC	9 cut(s)	148, 338, 414, 576, 631, 1029, 1320, 1604, 1754
Lsp1109I	GCAGC	8 cut(s)	92, 109, 250, 502, 524, 991, 1798, 1801
LweI	GCATC	4 cut(s)	220, 1423, 1609, 1773
MaeI	CTAG	4 cut(s)	47, 204, 900, 1437
MaeII	ACGT	1 cut(s)	1299
MaeIII	GTNAC	8 cut(s)	763, 829, 856, 1271, 1360, 1597, 1816, 1850
MalI	GATC	9 cut(s)	150, 340, 416, 578, 633, 1031, 1322, 1606, 1756
MbiI	CCGCTC	1 cut(s)	1861
MboI	GATC	9 cut(s)	148, 338, 414, 576, 631, 1029, 1320, 1604, 1754
MboII	GAAGA	8 cut(s)	77, 476, 557, 943, 1103, 1511, 1525, 2017
MfeI	CAATTG	3 cut(s)	183, 747, 1392
MflI	RGATCY	1 cut(s)	1604
MhlI	GDGCHC	3 cut(s)	103, 1342, 1630
MlsI	TGGCCA	1 cut(s)	1295
MluNI	TGGCCA	1 cut(s)	1295
MlyI	GAGTC	2 cut(s)	698, 771
MmeI	TCCRAC	1 cut(s)	970
Mox20I	TGGCCA	1 cut(s)	1295
Mph1103I	ATGCAT	1 cut(s)	1764
MroXI	GAANNNNTTC	3 cut(s)	1098, 1152, 1770
MscI	TGGCCA	1 cut(s)	1295
MseI	TTAA	4 cut(s)	134, 722, 959, 1347
MslI	CAYNNNNRTG	2 cut(s)	1217, 2108
Msp20I	TGGCCA	1 cut(s)	1295
MspA1I	CMGCKG	2 cut(s)	515, 1232
MspI	CCGG	1 cut(s)	1937
MspR9I	CCNGG	2 cut(s)	168, 1077
MunI	CAATTG	3 cut(s)	183, 747, 1392
Mva1269I	GAATGC	1 cut(s)	433
MvaI	CCWGG	2 cut(s)	168, 1077
MwoI	GCNNNNNNNGC	6 cut(s)	119, 512, 1013, 1182, 1570, 1730
NcoI	CCATGG	1 cut(s)	1245
NdeI	CATATG	2 cut(s)	573, 1018
NdeII	GATC	9 cut(s)	148, 338, 414, 576, 631, 1029, 1320, 1604, 1754
NheI	GCTAGC	1 cut(s)	899
NlaIII	CATG	8 cut(s)	523, 781, 982, 1000, 1249, 1279, 1370, 1766
NlaIV	GGNNCC	1 cut(s)	705
NmuCI	GTSAC	4 cut(s)	763, 1271, 1597, 1850
NsiI	ATGCAT	1 cut(s)	1764
NspV	TTCGAA	2 cut(s)	1102, 2173
PaqCI	CACCTGC	1 cut(s)	940
PctI	GAATGC	1 cut(s)	433
PdmI	GAANNNNTTC	3 cut(s)	1098, 1152, 1770
PfeI	GAWTC	5 cut(s)	33, 794, 908, 993, 2257
PkrI	GCNGC	9 cut(s)	82, 124, 240, 514, 517, 1006, 1788, 1791, 1837
PleI	GAGTC	2 cut(s)	697, 770
PpsI	GAGTC	2 cut(s)	697, 770
PpuMI	RGGWCCY	1 cut(s)	703
PshAI	GACNNNNGTC	1 cut(s)	1647
PsiI	TTATAA	1 cut(s)	1988
Psp124BI	GAGCTC	1 cut(s)	1342
Psp5II	RGGWCCY	1 cut(s)	703
Psp6I	CCWGG	2 cut(s)	166, 1075
PspGI	CCWGG	2 cut(s)	166, 1075
PspN4I	GGNNCC	1 cut(s)	705
PspPI	GGNCC	4 cut(s)	164, 703, 1910, 2191
PspPPI	RGGWCCY	1 cut(s)	703
PstI	CTGCAG	2 cut(s)	240, 1387
PstNI	CAGNNNCTG	1 cut(s)	2026
PsuI	RGATCY	1 cut(s)	1604
PvuII	CAGCTG	2 cut(s)	515, 1232
RsaI	GTAC	5 cut(s)	29, 401, 1084, 1353, 2030
RsaNI	GTAC	5 cut(s)	28, 400, 1083, 1352, 2029
RseI	CAYNNNNRTG	2 cut(s)	1217, 2108
SacI	GAGCTC	1 cut(s)	1342
SaqAI	TTAA	4 cut(s)	134, 722, 959, 1347
SatI	GCNGC	9 cut(s)	81, 123, 239, 513, 516, 1005, 1787, 1790, 1836
Sau3AI	GATC	9 cut(s)	148, 338, 414, 576, 631, 1029, 1320, 1604, 1754
Sau96I	GGNCC	4 cut(s)	164, 703, 1910, 2191
SchI	GAGTC	2 cut(s)	698, 771
ScrFI	CCNGG	2 cut(s)	168, 1077
SduI	GDGCHC	3 cut(s)	103, 1342, 1630
SfaNI	GCATC	4 cut(s)	220, 1423, 1609, 1773
SfcI	CTRYAG	3 cut(s)	236, 1383, 1728
SfuI	TTCGAA	2 cut(s)	1102, 2173
SinI	GGWCC	3 cut(s)	703, 1910, 2191
SmiMI	CAYNNNNRTG	2 cut(s)	1217, 2108
SmlI	CTYRAG	2 cut(s)	555, 686
SmoI	CTYRAG	2 cut(s)	555, 686
SpeI	ACTAGT	1 cut(s)	46
SsiI	CCGC	9 cut(s)	125, 322, 1222, 1316, 1573, 1670, 1814, 1835, 1859
SspI	AATATT	2 cut(s)	1807, 1920
SspMI	CTAG	4 cut(s)	47, 204, 900, 1437
SstI	GAGCTC	1 cut(s)	1342
StyD4I	CCNGG	2 cut(s)	166, 1075
StyI	CCWWGG	2 cut(s)	1245, 1734
TaaI	ACNGT	6 cut(s)	538, 816, 1087, 1533, 1729, 2013
TaiI	ACGT	1 cut(s)	1302
TaqI	TCGA	4 cut(s)	634, 1102, 2173, 2352
TaqII	GACCGA	1 cut(s)	1986
TatI	WGTACW	1 cut(s)	1082
TauI	GCSGC	1 cut(s)	1838
TfiI	GAWTC	5 cut(s)	33, 794, 908, 993, 2257
Tru1I	TTAA	4 cut(s)	134, 722, 959, 1347
Tru9I	TTAA	4 cut(s)	134, 722, 959, 1347
TscAI	CASTG	7 cut(s)	90, 380, 772, 847, 1264, 1575, 1606
TseFI	GTSAC	4 cut(s)	763, 1271, 1597, 1850
TseI	GCWGC	8 cut(s)	80, 122, 238, 512, 515, 1004, 1786, 1789
Tsp45I	GTSAC	4 cut(s)	763, 1271, 1597, 1850
TspDTI	ATGAA	8 cut(s)	514, 967, 985, 1128, 1205, 1214, 1689, 1779
TspGWI	ACGGA	4 cut(s)	716, 935, 943, 2212
TspRI	CASTG	7 cut(s)	90, 380, 772, 847, 1264, 1575, 1606
VneI	GTGCAC	1 cut(s)	1626
VpaK11BI	GGWCC	3 cut(s)	703, 1910, 2191
XapI	RAATTY	4 cut(s)	283, 332, 872, 2162
XmiI	GTMKAC	2 cut(s)	1535, 2185
XmnI	GAANNNNTTC	3 cut(s)	1098, 1152, 1770
XspI	CTAG	4 cut(s)	47, 204, 900, 1437
Zsp2I	ATGCAT	1 cut(s)	1764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.