Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002865

Physical Location & Seq

Genomic Coordinates Forward (+)

13715266 .. 13748519

Gene Structure 33254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00343900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGGGTATTATGGAAGAGACTAAAAAGCTGGGATGGCACGATGTATTCAGCGTTGCTATTGCAGCTGCCATGTTCATTTTTATCACAGTCTTATCTAACTATACTCAAGCTCGTCTCCAGCATATGATTATCAGGGAGAAAATGACATACAGAGAATTGAAGGTTATTAGAGCTGGTCGACAAGTTCCAGTTTCTATTTGTGATATTGTTGTGGGTGATGTTATATTCCTTGAGTTTGGTGATGAGGTCCCTGCCGATGGCATTTTAATCCATGGTTGCTTACTTGCAATTGATAAGTCCAGAGTCACTGGAGAGAGCATGATTTTTCATGAGGATTCAAAGAAACCATTTCTACAGTCTGGATGGGAAGTAGCACATGGCAGTGCTACAATGCTGGTAACTGGGGTAGGGAAATTTACGGAATTGGGAATTCTCAGGGCTAGCACCGGTTCAAAAGACACGAAGAATAAAACCCACTTGCAGGTGCTTTTAAAGGAGGTTGCTACCTTCATGGGTGCTGTCGGATTCATGGTTGCTGCCATTGTTGCATATGTTGTTTGGTTCAGAGACTTCTTCACTGGTGATAGTTCAAATGGAAGTCCTGAACCTGGAAGTACACTTGAAGAAGTCATTCGAATTAGTATTATTGCAGTCGCCATATTTGTCGTTGCATTACCTGAAGTGCTTCCTTTAGCTTTCAACATAAGCCGTCTCAGCTTAATGAAAAAGTTGAAGGGAGAGAATGCCTCAGTGCAGAGGCCAGCTGTATGTGAAACCATGGCCTTATGCAATGATGCACTCTGTGACAAGACTGGAATTACTTTGGACAAGATGACCGTTTTTGAGGCCTATGCTGGTCAGAAGAAAATCAATTTTGCTCAGAGTACGTGCAACTTGTCTCCAATACTGTCATCCTTACTTGCTGAAGGAATTGCTCAGAATCCATCTGTGGTTGGGAGTGGTGATGTTCAGGATTCTCGATCACCAATTGAAAGGGCCATTCTGCATTGGGGACTCAAGCTGGGAATGAATATTGATGAGATAAGGTCTCGGGGTTCAGTTATGCAAGTTTTGCCATTCAATTCAGAAAGAAAACGAGGCGGCGTTGCACTTAATCTGCCAAATGGTCGAGTTCATATACACTGGAAAGGGGCAGCTGAAAGAGTCTTGGCCTCATGTACAAGATACATTGGGGATAATGATCAGTTTTTACCAATGGATGATGATAAGTTGACATTTTTTGATAAAGCTATCAAGGATATGGCTTCTGGAGGTTTGCATTGCGTTGCCATTGCATATAGATCACTTGAATTGGACAATGTTCTAAGCCATAATAATGGACAACTAGCGCAGTGGGAATTACCTGAGGACGACCTCATTTTACTAGCTATTGTTGGTATTAAGGATGATGTTCAAGTGGAGATCAAGGAATCAGTGAAAATATCACGAAGAGCTGGCATTAAGGTACGCCTTATTACGCATGACAATCCTCAAACTGCAAAAGCAATTGCTAAGGAATGTGGCATACTTGCTTCTGATGCGTCAGAGGACAATCTTATTGAAGGAAAAGAGTTCCGAGAACTTTCTGATATTGGAAGAGAAGAATCAGCAGAGAAGATTTCGGTAATGCCACGGTCTACCCCCAATGACAAACTTTTGCTTGTGCAAGCACTGCAGAAAAGAGGGAAGGTTGTTGCTGTCACTGGATATGTCAGTAATGATGCTCAGGCACTACATGAGGCCGACATTGGTCTTGCTATGGGTGAACAAGCGGATGAAGTTGCTAAAGAGAGTTCAGATATCATAATCTTGGATGGCAATTTCGCTACTGTAGTCAAGTGTTTCAAATGGGGACGATCTATGCATGAAAACGTTCTGAGAGTTATGCAGCAGCAACTGACAGCCAATATTGTAGCAGTAACTATAAACTGCTTGGCGGCAGTTTACTATCATGACATTCCTCTCAATGCTGTGCAGTTTGTGTGGGTGATTGTTATCATATTTGGTCTTGGACCAGTAGTATTGGCTACTGAATCTCCGGCTGATCACCTGATGAACGTACCCCCTATTGACCGAGGACAACCTCTTATAAAATATATTCGGTGGAAGAGACTGTTGATACAGGTTCTGTACCAAATTATTGCCCTGCTTTTCATCAATTTTCAAGGAGGGAGTTTACTGAAAAATTATACCAGAGACCATGCCACCAAAGTGAAAAATACAATGATATTCAACACATTTGTTATATGTCAGATTTCCATTGAATTCGGAGTTCGAAAGACTGGTATACTGGACCATCCTTTGAAATGGATTACTGCTAACTCCGTGTTTCTGGGAATAGTGGGAATAATTCTTGTGATTCAGTTTATCATCATTGAGTTTCTTGGGAAGGCGTTTTTCATAGTCAGGCTTGACTGGAAAGAGTGGCAGTTTTCCCTCTCTCTTGGAATTGTCGAGTTGTTTTTTGCACTGCTTCTATTCGTAAAGCACTTGACACAAAGGAATCATCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009506 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

837

Amino Acids

92.66

Weight (kDa)

6.6

Isoelectric Point (pI)

33.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	48 - 144	8.3e-15	P-type ATPase actuator domain
Cation_ATPase	PF13246	305 - 472	1.1e-27	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	460 - 582	6.5e-07	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	653 - 823	3.9e-23	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002865)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06912
pyrus_communis	pycom14g06520
rosa_chinensis	RchiOBHm_Chr4g0398821 RchiOBHm_Chr4g0398831 RchiOBHm_Chr4g0398851 RchiOBHm_Chr4g0398861
rosa_laevigata	RLG00000009311 RLG00000009312 RLG00000009316
rosa_multiflora	Rmu_sc0002885.1_g000007 Rmu_sc0002885.1_g000009 Rmu_sc0004474.1_g000001 Rmu_sc0004751.1_g000005
rosa_roxburghii	Rroxscaffold_173G00435010 Rroxscaffold_5G00343860 Rroxscaffold_5G00343900 Rroxscaffold_5G00355000
rosa_rugosa	Rorug04G0012100 Rorug04G0012300 Rorug04G0012400 Rorug04G0012600
rosa_samantha	Rh4AG090100 Rh4AG090400 Rh4BG087200 Rh4BG087500 Rh4BG087600 Rh4BG087700 Rh4CG098200 Rh4CG098400 Rh4CG098700 Rh4DG081500 Rh4DG081600 Rh4DG081800 Rh4DG082000 Rh4DG082300 Rh4DG082700
rosa_wichuraiana	Rw4G007420 Rw4G007440 Rw4G007480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2090
AarI	CACCTGC	1 cut(s)	472
Acc36I	ACCTGC	1 cut(s)	472
AccI	GTMKAC	3 cut(s)	178, 1637, 2287
AciI	CCGC	3 cut(s)	1101, 1772, 1937
AclI	AACGTT	1 cut(s)	1872
AcsI	RAATTY	3 cut(s)	413, 429, 2264
AcuI	CTGAAG	2 cut(s)	699, 945
AdeI	CACNNNGTG	1 cut(s)	803
AfaI	GTAC	6 cut(s)	616, 886, 1180, 1467, 2061, 2132
AfiI	CCNNNNNNNGG	3 cut(s)	257, 481, 608
AgeI	ACCGGT	1 cut(s)	446
AjnI	CCWGG	1 cut(s)	607
AleI	CACNNNNGTG	1 cut(s)	2210
Alw26I	GTCTC	8 cut(s)	11, 119, 561, 716, 903, 1053, 2104, 2190
AlwNI	CAGNNNCTG	2 cut(s)	1897, 2128
Ama87I	CYCGRG	1 cut(s)	1050
AoxI	GGCC	6 cut(s)	758, 780, 846, 996, 1170, 1740
ApeKI	GCWGC	6 cut(s)	62, 65, 536, 1154, 1888, 1891
ApoI	RAATTY	3 cut(s)	413, 429, 2264
AsiGI	ACCGGT	1 cut(s)	446
Asp700I	GAANNNNTTC	3 cut(s)	630, 684, 1872
AspLEI	GCGC	1 cut(s)	1351
AspS9I	GGNCC	4 cut(s)	247, 996, 2012, 2293
AsuHPI	GGTGA	8 cut(s)	227, 251, 593, 974, 975, 1775, 1999, 2039
AsuII	TTCGAA	2 cut(s)	634, 2275
AsuNHI	GCTAGC	1 cut(s)	440
AvaI	CYCGRG	1 cut(s)	1050
AvaII	GGWCC	3 cut(s)	247, 2012, 2293
AxyI	CCTNAGG	1 cut(s)	1365
BbvI	GCAGC	6 cut(s)	52, 74, 523, 1166, 1900, 1903
BccI	CCATC	6 cut(s)	27, 251, 357, 952, 1808, 2304
BceAI	ACGGC	1 cut(s)	693
BciT130I	CCWGG	1 cut(s)	609
BclI	TGATCA	2 cut(s)	1201, 2044
BcoDI	GTCTC	8 cut(s)	11, 119, 561, 716, 903, 1053, 2104, 2190
BfaI	CTAG	3 cut(s)	441, 1346, 1385
BfmI	CTRYAG	3 cut(s)	353, 1673, 1830
BfuAI	ACCTGC	1 cut(s)	472
BisI	GCNGC	8 cut(s)	63, 66, 537, 1102, 1155, 1889, 1892, 1938
BlsI	GCNGC	8 cut(s)	64, 67, 538, 1103, 1156, 1890, 1893, 1939
Bme1390I	CCNGG	1 cut(s)	609
Bme18I	GGWCC	3 cut(s)	247, 2012, 2293
BmeT110I	CYCGRG	1 cut(s)	1050
BmgT120I	GGNCC	4 cut(s)	247, 996, 2012, 2293
BmiI	GGNNCC	1 cut(s)	249
BmrFI	CCNGG	1 cut(s)	609
BmrI	ACTGGG	1 cut(s)	411
BmsI	GCATC	3 cut(s)	784, 1528, 1711
BmtI	GCTAGC	1 cut(s)	444
BmuI	ACTGGG	1 cut(s)	411
BoxI	GACNNNNGTC	1 cut(s)	1749
BplI	GAGNNNNNCTC	2 cut(s)	731, 763
BpmI	CTGGAG	3 cut(s)	101, 330, 1290
Bpu10I	CCTNAGC	2 cut(s)	1512, 1725
Bpu14I	TTCGAA	2 cut(s)	634, 2275
BpuEI	CTTGAG	3 cut(s)	90, 251, 1001
BsaAI	YACGTR	1 cut(s)	888
BsaBI	GATNNNNATC	2 cut(s)	1200, 1994
BsaI	GGTCTC	2 cut(s)	1053, 2190
BsaJI	CCNNGG	4 cut(s)	271, 777, 1631, 2074
BsaWI	WCCGGW	1 cut(s)	446
BsaXI	ACNNNNNCTCC	2 cut(s)	2020, 2050
Bsc4I	CCNNNNNNNGG	3 cut(s)	257, 481, 608
Bse118I	RCCGGY	1 cut(s)	446
Bse21I	CCTNAGG	1 cut(s)	1365
Bse3DI	GCAATG	3 cut(s)	796, 1279, 1290
Bse8I	GATNNNNATC	2 cut(s)	1200, 1994
BseBI	CCWGG	1 cut(s)	609
BseDI	CCNNGG	4 cut(s)	271, 777, 1631, 2074
BseGI	GGATG	8 cut(s)	38, 368, 911, 1225, 1411, 1780, 1819, 2296
BseJI	GATNNNNATC	2 cut(s)	1200, 1994
BseLI	CCNNNNNNNGG	3 cut(s)	257, 481, 608
BseMI	GCAATG	3 cut(s)	796, 1279, 1290
BseMII	CTCAG	8 cut(s)	448, 727, 762, 893, 950, 1356, 1739, 1868
BseXI	GCAGC	6 cut(s)	52, 74, 523, 1166, 1900, 1903
BseYI	CCCAGC	2 cut(s)	28, 1021
BsgI	GTGCAG	2 cut(s)	773, 1994
BshFI	GGCC	6 cut(s)	760, 782, 848, 998, 1172, 1742
BshTI	ACCGGT	1 cut(s)	446
BsiHKCI	CYCGRG	1 cut(s)	1050
BsiSI	CCGG	2 cut(s)	447, 2039
BslFI	GGGAC	3 cut(s)	233, 1026, 1866
BslI	CCNNNNNNNGG	3 cut(s)	257, 481, 608
BsmAI	GTCTC	8 cut(s)	11, 119, 561, 716, 903, 1053, 2104, 2190
BsmBI	CGTCTC	2 cut(s)	119, 716
BsmFI	GGGAC	3 cut(s)	233, 1026, 1866
BsmI	GAATGC	1 cut(s)	748
BsnI	GGCC	6 cut(s)	760, 782, 848, 998, 1172, 1742
Bso31I	GGTCTC	2 cut(s)	1053, 2190
BsoBI	CYCGRG	1 cut(s)	1050
Bsp119I	TTCGAA	2 cut(s)	634, 2275
Bsp1407I	TGTACA	1 cut(s)	1178
Bsp143I	GATC	6 cut(s)	980, 1201, 1301, 1422, 1856, 2044
Bsp19I	CCATGG	2 cut(s)	271, 777
BspACI	CCGC	3 cut(s)	1101, 1772, 1937
BspANI	GGCC	6 cut(s)	760, 782, 848, 998, 1172, 1742
BspCNI	CTCAG	8 cut(s)	447, 726, 761, 892, 949, 1357, 1738, 1869
BspHI	TCATGA	2 cut(s)	328, 1951
BspLI	GGNNCC	1 cut(s)	249
BspMAI	CTGCAG	1 cut(s)	1677
BspMI	ACCTGC	1 cut(s)	472
BspOI	GCTAGC	1 cut(s)	444
BspQI	GCTCTTC	1 cut(s)	1444
BspT104I	TTCGAA	2 cut(s)	634, 2275
BspTNI	GGTCTC	2 cut(s)	1053, 2190
BsrDI	GCAATG	3 cut(s)	796, 1279, 1290
BsrFI	RCCGGY	1 cut(s)	446
BsrGI	TGTACA	1 cut(s)	1178
BssAI	RCCGGY	1 cut(s)	446
BssECI	CCNNGG	4 cut(s)	271, 777, 1631, 2074
BssMI	GATC	6 cut(s)	980, 1201, 1301, 1422, 1856, 2044
BssNAI	GTATAC	1 cut(s)	2288
BssT1I	CCWWGG	2 cut(s)	271, 777
Bst1107I	GTATAC	1 cut(s)	2288
Bst2UI	CCWGG	1 cut(s)	609
Bst4CI	ACNGT	7 cut(s)	88, 357, 838, 909, 1635, 1831, 2115
Bst6I	CTCTTC	4 cut(s)	9, 1444, 1591, 2102
BstAPI	GCANNNNNTGC	2 cut(s)	1072, 1672
BstAUI	TGTACA	1 cut(s)	1178
BstBAI	YACGTR	1 cut(s)	888
BstBI	TTCGAA	2 cut(s)	634, 2275
BstC8I	GCNNGC	4 cut(s)	442, 762, 1456, 1668
BstDSI	CCRYGG	3 cut(s)	271, 777, 1631
BstF5I	GGATG	8 cut(s)	38, 368, 911, 1225, 1411, 1780, 1819, 2296
BstHHI	GCGC	1 cut(s)	1351
BstKTI	GATC	6 cut(s)	983, 1204, 1304, 1425, 1859, 2047
BstMAI	GTCTC	8 cut(s)	11, 119, 561, 716, 903, 1053, 2104, 2190
BstMBI	GATC	6 cut(s)	980, 1201, 1301, 1422, 1856, 2044
BstMWI	GCNNNNNNNGC	7 cut(s)	34, 62, 545, 714, 1072, 1538, 1672
BstNI	CCWGG	1 cut(s)	609
BstPAI	GACNNNNGTC	1 cut(s)	1749
BstSCI	CCNGG	1 cut(s)	607
BstSFI	CTRYAG	3 cut(s)	353, 1673, 1830
BstV1I	GCAGC	6 cut(s)	52, 74, 523, 1166, 1900, 1903
BstXI	CCANNNNNNTGG	1 cut(s)	1337
BstZ17I	GTATAC	1 cut(s)	2288
Bsu36I	CCTNAGG	1 cut(s)	1365
BsuRI	GGCC	6 cut(s)	760, 782, 848, 998, 1172, 1742
BtgI	CCRYGG	3 cut(s)	271, 777, 1631
BtsCI	GGATG	8 cut(s)	38, 368, 911, 1225, 1411, 1780, 1819, 2296
BtsI	GCAGTG	4 cut(s)	388, 1358, 1670, 2468
BveI	ACCTGC	1 cut(s)	472
Cac8I	GCNNGC	4 cut(s)	442, 762, 1456, 1668
CaiI	CAGNNNCTG	2 cut(s)	1897, 2128
CciI	TCATGA	2 cut(s)	328, 1951
CfoI	GCGC	1 cut(s)	1351
Cfr10I	RCCGGY	1 cut(s)	446
Cfr13I	GGNCC	4 cut(s)	247, 996, 2012, 2293
CseI	GACGC	1 cut(s)	1530
Csp6I	GTAC	6 cut(s)	615, 885, 1179, 1466, 2060, 2131
CspAI	ACCGGT	1 cut(s)	446
CviQI	GTAC	6 cut(s)	615, 885, 1179, 1466, 2060, 2131
DpnI	GATC	6 cut(s)	982, 1203, 1303, 1424, 1858, 2046
DpnII	GATC	6 cut(s)	980, 1201, 1301, 1422, 1856, 2044
DraI	TTTAAA	1 cut(s)	492
DraIII	CACNNNGTG	1 cut(s)	803
Eam1104I	CTCTTC	4 cut(s)	9, 1444, 1591, 2102
EarI	CTCTTC	4 cut(s)	9, 1444, 1591, 2102
Eco130I	CCWWGG	2 cut(s)	271, 777
Eco147I	AGGCCT	1 cut(s)	848
Eco31I	GGTCTC	2 cut(s)	1053, 2190
Eco32I	GATATC	1 cut(s)	1801
Eco47I	GGWCC	3 cut(s)	247, 2012, 2293
Eco57I	CTGAAG	2 cut(s)	699, 945
Eco81I	CCTNAGG	1 cut(s)	1365
Eco88I	CYCGRG	1 cut(s)	1050
EcoO109I	RGGNCCY	1 cut(s)	247
EcoRI	GAATTC	2 cut(s)	429, 2264
EcoRII	CCWGG	1 cut(s)	607
EcoRV	GATATC	1 cut(s)	1801
EcoT14I	CCWWGG	2 cut(s)	271, 777
EcoT22I	ATGCAT	1 cut(s)	1866
ErhI	CCWWGG	2 cut(s)	271, 777
Esp3I	CGTCTC	2 cut(s)	119, 716
FaqI	GGGAC	3 cut(s)	233, 1026, 1866
FauNDI	CATATG	2 cut(s)	123, 550
FbaI	TGATCA	2 cut(s)	1201, 2044
FblI	GTMKAC	3 cut(s)	178, 1637, 2287
Fnu4HI	GCNGC	8 cut(s)	63, 66, 537, 1102, 1155, 1889, 1892, 1938
FokI	GGATG	8 cut(s)	45, 375, 898, 1232, 1418, 1787, 1826, 2283
Fsp4HI	GCNGC	8 cut(s)	63, 66, 537, 1102, 1155, 1889, 1892, 1938
FspBI	CTAG	3 cut(s)	441, 1346, 1385
GlaI	GCGC	1 cut(s)	1350
GluI	GCNGC	8 cut(s)	63, 66, 537, 1102, 1155, 1889, 1892, 1938
GsaI	CCCAGC	2 cut(s)	32, 1025
GsuI	CTGGAG	3 cut(s)	101, 330, 1290
HaeIII	GGCC	6 cut(s)	760, 782, 848, 998, 1172, 1742
HapII	CCGG	2 cut(s)	447, 2039
HgaI	GACGC	1 cut(s)	1530
HhaI	GCGC	1 cut(s)	1351
Hin6I	GCGC	1 cut(s)	1349
HinP1I	GCGC	1 cut(s)	1349
HincII	GTYRAC	2 cut(s)	179, 1233
HindII	GTYRAC	2 cut(s)	179, 1233
HpaII	CCGG	2 cut(s)	447, 2039
HphI	GGTGA	8 cut(s)	227, 251, 593, 974, 975, 1775, 1999, 2039
Hpy166II	GTNNAC	8 cut(s)	179, 617, 1233, 1638, 1766, 1945, 2177, 2288
Hpy188III	TCNNGA	9 cut(s)	300, 329, 360, 602, 971, 978, 1269, 1446, 1952
Hpy8I	GTNNAC	8 cut(s)	179, 617, 1233, 1638, 1766, 1945, 2177, 2288
HpyAV	CCTTC	7 cut(s)	154, 517, 727, 920, 1556, 1681, 2383
HpyCH4III	ACNGT	7 cut(s)	88, 357, 838, 909, 1635, 1831, 2115
HpyCH4IV	ACGT	3 cut(s)	887, 1872, 2058
HpyF10VI	GCNNNNNNNGC	7 cut(s)	34, 62, 545, 714, 1072, 1538, 1672
HpySE526I	ACGT	3 cut(s)	887, 1872, 2058
HspAI	GCGC	1 cut(s)	1349
Ksp22I	TGATCA	2 cut(s)	1201, 2044
Kzo9I	GATC	6 cut(s)	980, 1201, 1301, 1422, 1856, 2044
LguI	GCTCTTC	1 cut(s)	1444
Lsp1109I	GCAGC	6 cut(s)	52, 74, 523, 1166, 1900, 1903
LweI	GCATC	3 cut(s)	784, 1528, 1711
MaeI	CTAG	3 cut(s)	441, 1346, 1385
MaeII	ACGT	3 cut(s)	887, 1872, 2058
MaeIII	GTNAC	5 cut(s)	304, 397, 803, 1699, 1918
MalI	GATC	6 cut(s)	982, 1203, 1303, 1424, 1858, 2046
MboI	GATC	6 cut(s)	980, 1201, 1301, 1422, 1856, 2044
MfeI	CAATTG	3 cut(s)	288, 987, 1506
MlyI	GAGTC	3 cut(s)	312, 1008, 1173
MmeI	TCCRAC	1 cut(s)	502
Mph1103I	ATGCAT	1 cut(s)	1866
MroXI	GAANNNNTTC	3 cut(s)	630, 684, 1872
MseI	TTAA	6 cut(s)	266, 491, 719, 1113, 1401, 1461
MslI	CAYNNNNRTG	3 cut(s)	381, 1335, 2210
MspA1I	CMGCKG	3 cut(s)	65, 764, 1157
MspI	CCGG	2 cut(s)	447, 2039
MspR9I	CCNGG	1 cut(s)	609
MunI	CAATTG	3 cut(s)	288, 987, 1506
Mva1269I	GAATGC	1 cut(s)	748
MvaI	CCWGG	1 cut(s)	609
MwoI	GCNNNNNNNGC	7 cut(s)	34, 62, 545, 714, 1072, 1538, 1672
NcoI	CCATGG	2 cut(s)	271, 777
NdeI	CATATG	2 cut(s)	123, 550
NdeII	GATC	6 cut(s)	980, 1201, 1301, 1422, 1856, 2044
NheI	GCTAGC	1 cut(s)	440
NlaIV	GGNNCC	1 cut(s)	249
NmuCI	GTSAC	3 cut(s)	304, 803, 1699
NsiI	ATGCAT	1 cut(s)	1866
NspV	TTCGAA	2 cut(s)	634, 2275
OliI	CACNNNNGTG	1 cut(s)	2210
PagI	TCATGA	2 cut(s)	328, 1951
PaqCI	CACCTGC	1 cut(s)	472
PceI	AGGCCT	1 cut(s)	848
PciSI	GCTCTTC	1 cut(s)	1444
PctI	GAATGC	1 cut(s)	748
PdmI	GAANNNNTTC	3 cut(s)	630, 684, 1872
PfeI	GAWTC	9 cut(s)	335, 525, 940, 974, 1430, 1604, 2033, 2359, 2503
PinAI	ACCGGT	1 cut(s)	446
PkrI	GCNGC	8 cut(s)	64, 67, 538, 1103, 1156, 1890, 1893, 1939
PleI	GAGTC	3 cut(s)	311, 1008, 1172
PpsI	GAGTC	3 cut(s)	311, 1008, 1172
Ppu21I	YACGTR	1 cut(s)	888
PpuMI	RGGWCCY	1 cut(s)	247
PshAI	GACNNNNGTC	1 cut(s)	1749
PsiI	TTATAA	1 cut(s)	2090
Psp1406I	AACGTT	1 cut(s)	1872
Psp5II	RGGWCCY	1 cut(s)	247
Psp6I	CCWGG	1 cut(s)	607
PspFI	CCCAGC	2 cut(s)	28, 1021
PspGI	CCWGG	1 cut(s)	607
PspN4I	GGNNCC	1 cut(s)	249
PspPI	GGNCC	4 cut(s)	247, 996, 2012, 2293
PspPPI	RGGWCCY	1 cut(s)	247
PstI	CTGCAG	1 cut(s)	1677
PstNI	CAGNNNCTG	2 cut(s)	1897, 2128
PvuII	CAGCTG	3 cut(s)	65, 764, 1157
RsaI	GTAC	6 cut(s)	616, 886, 1180, 1467, 2061, 2132
RsaNI	GTAC	6 cut(s)	615, 885, 1179, 1466, 2060, 2131
RseI	CAYNNNNRTG	3 cut(s)	381, 1335, 2210
SalI	GTCGAC	1 cut(s)	177
SapI	GCTCTTC	1 cut(s)	1444
SaqAI	TTAA	6 cut(s)	266, 491, 719, 1113, 1401, 1461
SatI	GCNGC	8 cut(s)	63, 66, 537, 1102, 1155, 1889, 1892, 1938
Sau3AI	GATC	6 cut(s)	980, 1201, 1301, 1422, 1856, 2044
Sau96I	GGNCC	4 cut(s)	247, 996, 2012, 2293
SchI	GAGTC	3 cut(s)	312, 1008, 1173
ScrFI	CCNGG	1 cut(s)	609
SfaNI	GCATC	3 cut(s)	784, 1528, 1711
SfcI	CTRYAG	3 cut(s)	353, 1673, 1830
SfuI	TTCGAA	2 cut(s)	634, 2275
SinI	GGWCC	3 cut(s)	247, 2012, 2293
SmiMI	CAYNNNNRTG	3 cut(s)	381, 1335, 2210
SmlI	CTYRAG	3 cut(s)	105, 230, 1016
SmoI	CTYRAG	3 cut(s)	105, 230, 1016
SseBI	AGGCCT	1 cut(s)	848
SsiI	CCGC	3 cut(s)	1101, 1772, 1937
SspI	AATATT	2 cut(s)	1033, 1909
SspMI	CTAG	3 cut(s)	441, 1346, 1385
StuI	AGGCCT	1 cut(s)	848
StyD4I	CCNGG	1 cut(s)	607
StyI	CCWWGG	2 cut(s)	271, 777
TaaI	ACNGT	7 cut(s)	88, 357, 838, 909, 1635, 1831, 2115
TaiI	ACGT	3 cut(s)	890, 1875, 2061
TaqI	TCGA	6 cut(s)	178, 634, 979, 1129, 2275, 2454
TaqII	GACCGA	1 cut(s)	2088
TatI	WGTACW	2 cut(s)	614, 1178
TauI	GCSGC	2 cut(s)	1104, 1940
TfiI	GAWTC	9 cut(s)	335, 525, 940, 974, 1430, 1604, 2033, 2359, 2503
Tru1I	TTAA	6 cut(s)	266, 491, 719, 1113, 1401, 1461
Tru9I	TTAA	6 cut(s)	266, 491, 719, 1113, 1401, 1461
TseFI	GTSAC	3 cut(s)	304, 803, 1699
TseI	GCWGC	6 cut(s)	62, 65, 536, 1154, 1888, 1891
Tsp45I	GTSAC	3 cut(s)	304, 803, 1699
TspGWI	ACGGA	2 cut(s)	434, 2314
VpaK11BI	GGWCC	3 cut(s)	247, 2012, 2293
XapI	RAATTY	3 cut(s)	413, 429, 2264
XmiI	GTMKAC	3 cut(s)	178, 1637, 2287
XmnI	GAANNNNTTC	3 cut(s)	630, 684, 1872
XspI	CTAG	3 cut(s)	441, 1346, 1385
Zsp2I	ATGCAT	1 cut(s)	1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.