Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0002865

Physical Location & Seq

Genomic Coordinates Forward (+)

12319720 .. 12332860

Gene Structure 13141 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG082000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGGAAGATTAATTTGTCGATCTCCTGAGCTGGTTCTGGTCTGTGTTTGTTATAGAGGGCGAAACATGCTTGTGCCAAAGGGTTTCTGGTGGAGTTTAGGCAGTGAGAGGCTGGGTTATTGGCGGTGGAGCCCTGGGTGTGATTTGGGATTCTTCCATGAAGATTGGCAGTGGTGGTGGCTGGGAGCTTTGGGATGGTGGTGGATATCTCGAGGTGGTTTCGTCGTGCAGATCAGATTTGGTGAAGGAGAGTATGATGGTCCAAGTATCAATTCGGTGGTGGTGGCTCTTAGCAGTCCAACGACGGCTCTTTTGCAGATGGTAACTGGGGTAGGGAAATTTACTGAATTGGGAAGGCTCAGGGCTAGCGCCGATTCAAAGGACACGGAGAAACGGAAGAATAAAACCCACTTGCAGGTCGCCATTTTTGTCGTTTCATTACCTGAAGTGCTTCCTTTAGCTTTCAACATAAGCCGTCTCAGCTCAATGAAAAAGATGAAGGCAGACAACATCTTGGTGCGGAGGCCAGCTGTATGTGAAACCATGGCCTTATGCAATGATGCTGTCTGTGACATGACTGGAATTACTTTGGACAACGTGGATGATGTTCAAGCGGGGATCACGGAAATGCAAAGAGCTGGCATTAAGGTACGCCTTGTTACGCATGACGATCCTCAAACTGCAAAAGCAATTGCTATGGAATGTGGCATACTTGCTTCTGATGGGTCAGATGCTAGTGAGGTAATTGTTGAAGGAGAAGTGTTCCGACTATCAGAACCTTGTCAGAGAGATGAATTAGCAGAGAAGATTTTGGTAATGCCACGGTCTACCCCCGATGACAAACTTTTGCTTGTGCGAGCTCTGCGGAAAAGAGGAAAGGTTGTTGCTGTCACTGGATCTGTCAGTAATGATGCTCGTGCACTACAAGAGGCCGACATTGGTCTTGCTGTGGGTGAACAAGCGACTGAAGTTGTTATTGAGAGTTCAGATATCATAATCTTGGATGGAAATTTCGCTACTGTAGCCAAGGGTTTCAGATGGGGACGATCTATGCATGAAAAGGTTCTGAGAGTTATGCAGCAGCAACTGACAGCCAATATTGTAGCAGTAACTATAAACTGCTTGGCGGCAGTTTACTATGGTCACATTCCGCTCAATGCTGTGGAGTTTGTGTGGGTGAATGTTATCATATTTGGTCTTGGACCACTAGTACTGGCTACTGAATATCCGGCTGAACGCCTGATGGACGAACCCCCTATTGACCGAGGACAACCTCTTATATATATTCGGTGGAAGAGACTGTTGATACAGGTTCTGTACCAAATTATTACCCTGCTTGTCATCAATTTTGAAGGAGGGAGTTTACTGAAAAATTATACCAGAGACCACGCCACCAAAGTGAAAAATACAATGATATTCAACACATTTGTTATATGTCAGATTTCCATTGAATTCGAAGTTCGAAAGACTGGTTTACTGGACCATCCTTTGAAATGGATTACTGCTAACTCCGTGTTTCTGGGAATAGTGGGAATAATTCTTGTGATTCAGTTTATCATCATTGAGTTTCTTGGGAAGGCGTTTTTCGTAGTCAGGCTTGACTGGAAAGAGTGGCAGTTTTCCCTCACTCTTGGAATTGTCGAGTTGTTTTTTGCACTGCTTCTATTCGTAAAGCACTTGACACAAAGGAATCATCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009506 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

566

Amino Acids

63.62

Weight (kDa)

7.56

Isoelectric Point (pI)

36.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase	PF00702	199 - 312	3e-07	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	383 - 552	6.3e-24	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002865)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06912
pyrus_communis	pycom14g06520
rosa_chinensis	RchiOBHm_Chr4g0398821 RchiOBHm_Chr4g0398831 RchiOBHm_Chr4g0398851 RchiOBHm_Chr4g0398861
rosa_laevigata	RLG00000009311 RLG00000009312 RLG00000009316
rosa_multiflora	Rmu_sc0002885.1_g000007 Rmu_sc0002885.1_g000009 Rmu_sc0004474.1_g000001 Rmu_sc0004751.1_g000005
rosa_roxburghii	Rroxscaffold_173G00435010 Rroxscaffold_5G00343860 Rroxscaffold_5G00343900 Rroxscaffold_5G00355000
rosa_rugosa	Rorug04G0012100 Rorug04G0012300 Rorug04G0012400 Rorug04G0012600
rosa_samantha	Rh4AG090100 Rh4AG090400 Rh4BG087200 Rh4BG087500 Rh4BG087600 Rh4BG087700 Rh4CG098200 Rh4CG098400 Rh4CG098700 Rh4DG081500 Rh4DG081600 Rh4DG081800 Rh4DG082000 Rh4DG082300 Rh4DG082700
rosa_wichuraiana	Rw4G007420 Rw4G007440 Rw4G007480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	406
AccBSI	CCGCTC	1 cut(s)	1153
AccI	GTMKAC	1 cut(s)	827
AciI	CCGC	6 cut(s)	124, 520, 614, 865, 1127, 1151
AclWI	GGATC	3 cut(s)	626, 665, 904
AcsI	RAATTY	3 cut(s)	338, 1009, 1451
AcuI	CTGAAG	2 cut(s)	465, 987
AfaI	GTAC	3 cut(s)	651, 1212, 1319
AfiI	CCNNNNNNNGG	1 cut(s)	415
AgsI	TTSAA	8 cut(s)	378, 466, 611, 752, 1352, 1420, 1451, 1492
AhlI	ACTAGT	1 cut(s)	1207
AjnI	CCWGG	1 cut(s)	133
AjuI	GAANNNNNNNTTGG	2 cut(s)	256, 288
AleI	CACNNNNGTG	1 cut(s)	1397
AluBI	AGCT	7 cut(s)	31, 188, 461, 483, 530, 638, 860
AluI	AGCT	7 cut(s)	31, 188, 461, 483, 530, 638, 860
Alw21I	GWGCWC	2 cut(s)	862, 922
Alw26I	GTCTC	3 cut(s)	482, 1291, 1377
Alw44I	GTGCAC	1 cut(s)	918
AlwI	GGATC	3 cut(s)	626, 665, 904
AlwNI	CAGNNNCTG	2 cut(s)	1087, 1315
Ama87I	CYCGRG	1 cut(s)	210
AoxI	GGCC	3 cut(s)	524, 546, 930
ApaLI	GTGCAC	1 cut(s)	918
ApeKI	GCWGC	2 cut(s)	1078, 1081
ApoI	RAATTY	3 cut(s)	338, 1009, 1451
ArsI	GACNNNNNNTTYG	2 cut(s)	295, 327
AseI	ATTAAT	1 cut(s)	11
Asp700I	GAANNNNTTC	2 cut(s)	450, 1062
AspLEI	GCGC	1 cut(s)	371
AspS9I	GGNCC	3 cut(s)	260, 1202, 1480
AsuHPI	GGTGA	3 cut(s)	254, 965, 1189
AsuII	TTCGAA	2 cut(s)	1455, 1462
AsuNHI	GCTAGC	1 cut(s)	365
AvaI	CYCGRG	1 cut(s)	210
AvaII	GGWCC	3 cut(s)	260, 1202, 1480
BaeGI	GKGCMC	1 cut(s)	922
BanII	GRGCYC	2 cut(s)	134, 862
BauI	CACGAG	1 cut(s)	915
Bbv12I	GWGCWC	2 cut(s)	862, 922
BbvI	GCAGC	2 cut(s)	1090, 1093
BccI	CCATC	8 cut(s)	189, 251, 313, 716, 998, 1032, 1237, 1491
BceAI	ACGGC	2 cut(s)	321, 459
BciT130I	CCWGG	1 cut(s)	135
BcoDI	GTCTC	3 cut(s)	482, 1291, 1377
BcuI	ACTAGT	1 cut(s)	1207
BfaI	CTAG	3 cut(s)	366, 735, 1208
BfmI	CTRYAG	1 cut(s)	1020
BfoI	RGCGCY	1 cut(s)	372
BfuAI	ACCTGC	1 cut(s)	406
BisI	GCNGC	3 cut(s)	1079, 1082, 1128
BlsI	GCNGC	3 cut(s)	1080, 1083, 1129
BmcAI	AGTACT	1 cut(s)	1212
Bme1390I	CCNGG	1 cut(s)	135
Bme18I	GGWCC	3 cut(s)	260, 1202, 1480
BmeT110I	CYCGRG	1 cut(s)	210
BmgT120I	GGNCC	3 cut(s)	260, 1202, 1480
BmiI	GGNNCC	1 cut(s)	131
BmrFI	CCNGG	1 cut(s)	135
BmrI	ACTGGG	1 cut(s)	336
BmsI	GCATC	3 cut(s)	550, 721, 901
BmtI	GCTAGC	1 cut(s)	369
BmuI	ACTGGG	1 cut(s)	336
BoxI	GACNNNNGTC	1 cut(s)	939
Bpu10I	CCTNAGC	2 cut(s)	27, 359
Bpu14I	TTCGAA	2 cut(s)	1455, 1462
BsaI	GGTCTC	1 cut(s)	1377
BsaJI	CCNNGG	6 cut(s)	133, 134, 543, 821, 1026, 1264
BsaXI	ACNNNNNCTCC	2 cut(s)	1157, 1187
Bsc4I	CCNNNNNNNGG	1 cut(s)	415
Bse1I	ACTGG	7 cut(s)	331, 583, 898, 1218, 1474, 1482, 1607
Bse3DI	GCAATG	1 cut(s)	562
BseBI	CCWGG	1 cut(s)	135
BseDI	CCNNGG	6 cut(s)	133, 134, 543, 821, 1026, 1264
BseGI	GGATG	4 cut(s)	200, 607, 1009, 1483
BseLI	CCNNNNNNNGG	1 cut(s)	415
BseMI	GCAATG	1 cut(s)	562
BseMII	CTCAG	4 cut(s)	18, 373, 493, 1058
BseNI	ACTGG	7 cut(s)	331, 583, 898, 1218, 1474, 1482, 1607
BseSI	GKGCMC	1 cut(s)	922
BseXI	GCAGC	2 cut(s)	1090, 1093
BseYI	CCCAGC	2 cut(s)	112, 181
BsgI	GTGCAG	1 cut(s)	248
BshFI	GGCC	3 cut(s)	526, 548, 932
BsiHKAI	GWGCWC	2 cut(s)	862, 922
BsiHKCI	CYCGRG	1 cut(s)	210
BsiSI	CCGG	1 cut(s)	1229
BslFI	GGGAC	1 cut(s)	1056
BslI	CCNNNNNNNGG	1 cut(s)	415
BsmAI	GTCTC	3 cut(s)	482, 1291, 1377
BsmBI	CGTCTC	1 cut(s)	482
BsmFI	GGGAC	1 cut(s)	1056
BsnI	GGCC	3 cut(s)	526, 548, 932
Bso31I	GGTCTC	1 cut(s)	1377
BsoBI	CYCGRG	1 cut(s)	210
Bsp119I	TTCGAA	2 cut(s)	1455, 1462
Bsp1286I	GDGCHC	3 cut(s)	134, 862, 922
Bsp143I	GATC	6 cut(s)	20, 231, 618, 670, 896, 1046
Bsp19I	CCATGG	1 cut(s)	543
BspACI	CCGC	6 cut(s)	124, 520, 614, 865, 1127, 1151
BspANI	GGCC	3 cut(s)	526, 548, 932
BspCNI	CTCAG	4 cut(s)	19, 372, 492, 1059
BspLI	GGNNCC	1 cut(s)	131
BspMI	ACCTGC	1 cut(s)	406
BspOI	GCTAGC	1 cut(s)	369
BspPI	GGATC	3 cut(s)	626, 665, 904
BspT104I	TTCGAA	2 cut(s)	1455, 1462
BspTNI	GGTCTC	1 cut(s)	1377
BsrBI	CCGCTC	1 cut(s)	1153
BsrDI	GCAATG	1 cut(s)	562
BsrI	ACTGG	7 cut(s)	331, 583, 898, 1218, 1474, 1482, 1607
BssECI	CCNNGG	6 cut(s)	133, 134, 543, 821, 1026, 1264
BssMI	GATC	6 cut(s)	20, 231, 618, 670, 896, 1046
BssSI	CACGAG	1 cut(s)	915
BssT1I	CCWWGG	2 cut(s)	543, 1026
Bst2BI	CACGAG	1 cut(s)	915
Bst2UI	CCWGG	1 cut(s)	135
Bst4CI	ACNGT	3 cut(s)	825, 1021, 1302
Bst6I	CTCTTC	1 cut(s)	1289
BstBI	TTCGAA	2 cut(s)	1455, 1462
BstC8I	GCNNGC	4 cut(s)	367, 528, 640, 858
BstDEI	CTNAG	5 cut(s)	27, 290, 359, 479, 1067
BstDSI	CCRYGG	2 cut(s)	543, 821
BstF5I	GGATG	4 cut(s)	200, 607, 1009, 1483
BstH2I	RGCGCY	1 cut(s)	372
BstHHI	GCGC	1 cut(s)	371
BstKTI	GATC	6 cut(s)	23, 234, 621, 673, 899, 1049
BstMAI	GTCTC	3 cut(s)	482, 1291, 1377
BstMBI	GATC	6 cut(s)	20, 231, 618, 670, 896, 1046
BstMWI	GCNNNNNNNGC	4 cut(s)	67, 480, 862, 1022
BstNI	CCWGG	1 cut(s)	135
BstNSI	RCATGY	1 cut(s)	70
BstPAI	GACNNNNGTC	1 cut(s)	939
BstSCI	CCNGG	1 cut(s)	133
BstSFI	CTRYAG	1 cut(s)	1020
BstSLI	GKGCMC	1 cut(s)	922
BstV1I	GCAGC	2 cut(s)	1090, 1093
BstX2I	RGATCY	1 cut(s)	896
BstYI	RGATCY	1 cut(s)	896
BsuRI	GGCC	3 cut(s)	526, 548, 932
BtgI	CCRYGG	2 cut(s)	543, 821
BtsCI	GGATG	4 cut(s)	200, 607, 1009, 1483
BtsI	GCAGTG	3 cut(s)	109, 176, 1655
BtsIMutI	CAGTG	4 cut(s)	109, 176, 891, 1655
BveI	ACCTGC	1 cut(s)	406
Cac8I	GCNNGC	4 cut(s)	367, 528, 640, 858
CaiI	CAGNNNCTG	2 cut(s)	1087, 1315
CfoI	GCGC	1 cut(s)	371
Cfr13I	GGNCC	3 cut(s)	260, 1202, 1480
Csp6I	GTAC	3 cut(s)	650, 1211, 1318
CviAII	CATG	6 cut(s)	67, 158, 544, 574, 665, 1055
CviQI	GTAC	3 cut(s)	650, 1211, 1318
DdeI	CTNAG	5 cut(s)	27, 290, 359, 479, 1067
DpnI	GATC	6 cut(s)	22, 233, 620, 672, 898, 1048
DpnII	GATC	6 cut(s)	20, 231, 618, 670, 896, 1046
Eam1104I	CTCTTC	1 cut(s)	1289
EarI	CTCTTC	1 cut(s)	1289
Ecl136II	GAGCTC	1 cut(s)	860
Eco130I	CCWWGG	2 cut(s)	543, 1026
Eco24I	GRGCYC	2 cut(s)	134, 862
Eco31I	GGTCTC	1 cut(s)	1377
Eco32I	GATATC	2 cut(s)	207, 991
Eco47I	GGWCC	3 cut(s)	260, 1202, 1480
Eco53kI	GAGCTC	1 cut(s)	860
Eco57I	CTGAAG	2 cut(s)	465, 987
Eco88I	CYCGRG	1 cut(s)	210
EcoICRI	GAGCTC	1 cut(s)	860
EcoRI	GAATTC	1 cut(s)	1451
EcoRII	CCWGG	1 cut(s)	133
EcoRV	GATATC	2 cut(s)	207, 991
EcoT14I	CCWWGG	2 cut(s)	543, 1026
EcoT22I	ATGCAT	1 cut(s)	1056
EcoT38I	GRGCYC	2 cut(s)	134, 862
ErhI	CCWWGG	2 cut(s)	543, 1026
Esp3I	CGTCTC	1 cut(s)	482
FaeI	CATG	6 cut(s)	70, 161, 547, 577, 668, 1058
FaqI	GGGAC	1 cut(s)	1056
FatI	CATG	6 cut(s)	66, 157, 543, 573, 664, 1054
FauI	CCCGC	1 cut(s)	607
FblI	GTMKAC	1 cut(s)	827
Fnu4HI	GCNGC	3 cut(s)	1079, 1082, 1128
FokI	GGATG	4 cut(s)	207, 614, 1016, 1470
FriOI	GRGCYC	2 cut(s)	134, 862
Fsp4HI	GCNGC	3 cut(s)	1079, 1082, 1128
FspBI	CTAG	3 cut(s)	366, 735, 1208
GlaI	GCGC	1 cut(s)	370
GluI	GCNGC	3 cut(s)	1079, 1082, 1128
GsaI	CCCAGC	2 cut(s)	116, 185
HaeII	RGCGCY	1 cut(s)	372
HaeIII	GGCC	3 cut(s)	526, 548, 932
HapII	CCGG	1 cut(s)	1229
HhaI	GCGC	1 cut(s)	371
Hin1II	CATG	6 cut(s)	70, 161, 547, 577, 668, 1058
Hin6I	GCGC	1 cut(s)	369
HinP1I	GCGC	1 cut(s)	369
HinfI	GANTC	4 cut(s)	150, 374, 1546, 1690
HpaII	CCGG	1 cut(s)	1229
HphI	GGTGA	3 cut(s)	254, 965, 1189
Hpy166II	GTNNAC	6 cut(s)	828, 920, 956, 1135, 1364, 1475
Hpy188III	TCNNGA	2 cut(s)	26, 210
Hpy8I	GTNNAC	6 cut(s)	828, 920, 956, 1135, 1364, 1475
Hpy99I	CGWCG	2 cut(s)	227, 307
HpyAV	CCTTC	6 cut(s)	239, 348, 493, 746, 1346, 1570
HpyCH4III	ACNGT	3 cut(s)	825, 1021, 1302
HpyCH4IV	ACGT	1 cut(s)	597
HpyF10VI	GCNNNNNNNGC	4 cut(s)	67, 480, 862, 1022
HpyF3I	CTNAG	5 cut(s)	27, 290, 359, 479, 1067
HpySE526I	ACGT	1 cut(s)	597
Hsp92II	CATG	6 cut(s)	70, 161, 547, 577, 668, 1058
HspAI	GCGC	1 cut(s)	369
Kzo9I	GATC	6 cut(s)	20, 231, 618, 670, 896, 1046
LmnI	GCTCC	2 cut(s)	129, 185
Lsp1109I	GCAGC	2 cut(s)	1090, 1093
LweI	GCATC	3 cut(s)	550, 721, 901
MaeI	CTAG	3 cut(s)	366, 735, 1208
MaeII	ACGT	1 cut(s)	597
MaeIII	GTNAC	6 cut(s)	322, 569, 658, 889, 1108, 1142
MalI	GATC	6 cut(s)	22, 233, 620, 672, 898, 1048
MbiI	CCGCTC	1 cut(s)	1153
MboI	GATC	6 cut(s)	20, 231, 618, 670, 896, 1046
MboII	GAAGA	6 cut(s)	18, 145, 173, 409, 817, 1306
MfeI	CAATTG	1 cut(s)	690
MflI	RGATCY	1 cut(s)	896
MhlI	GDGCHC	3 cut(s)	134, 862, 922
MmeI	TCCRAC	2 cut(s)	323, 790
Mph1103I	ATGCAT	1 cut(s)	1056
MroXI	GAANNNNTTC	2 cut(s)	450, 1062
MseI	TTAA	3 cut(s)	11, 645, 1699
MslI	CAYNNNNRTG	4 cut(s)	71, 515, 626, 1397
MspA1I	CMGCKG	1 cut(s)	530
MspI	CCGG	1 cut(s)	1229
MspR9I	CCNGG	1 cut(s)	135
MunI	CAATTG	1 cut(s)	690
MvaI	CCWGG	1 cut(s)	135
MwoI	GCNNNNNNNGC	4 cut(s)	67, 480, 862, 1022
NcoI	CCATGG	1 cut(s)	543
NdeII	GATC	6 cut(s)	20, 231, 618, 670, 896, 1046
NheI	GCTAGC	1 cut(s)	365
NlaIII	CATG	6 cut(s)	70, 161, 547, 577, 668, 1058
NlaIV	GGNNCC	1 cut(s)	131
NmuCI	GTSAC	3 cut(s)	569, 889, 1142
NsiI	ATGCAT	1 cut(s)	1056
NspI	RCATGY	1 cut(s)	70
NspV	TTCGAA	2 cut(s)	1455, 1462
OliI	CACNNNNGTG	1 cut(s)	1397
PaeR7I	CTCGAG	1 cut(s)	210
PasI	CCCWGGG	1 cut(s)	134
PdmI	GAANNNNTTC	2 cut(s)	450, 1062
PfeI	GAWTC	4 cut(s)	150, 374, 1546, 1690
PkrI	GCNGC	3 cut(s)	1080, 1083, 1129
PshAI	GACNNNNGTC	1 cut(s)	939
PshBI	ATTAAT	1 cut(s)	11
Psp124BI	GAGCTC	1 cut(s)	862
Psp6I	CCWGG	1 cut(s)	133
PspFI	CCCAGC	2 cut(s)	112, 181
PspGI	CCWGG	1 cut(s)	133
PspN4I	GGNNCC	1 cut(s)	131
PspPI	GGNCC	3 cut(s)	260, 1202, 1480
PstNI	CAGNNNCTG	2 cut(s)	1087, 1315
PsuI	RGATCY	1 cut(s)	896
PvuII	CAGCTG	1 cut(s)	530
RsaI	GTAC	3 cut(s)	651, 1212, 1319
RsaNI	GTAC	3 cut(s)	650, 1211, 1318
RseI	CAYNNNNRTG	4 cut(s)	71, 515, 626, 1397
SacI	GAGCTC	1 cut(s)	862
SaqAI	TTAA	3 cut(s)	11, 645, 1699
SatI	GCNGC	3 cut(s)	1079, 1082, 1128
Sau3AI	GATC	6 cut(s)	20, 231, 618, 670, 896, 1046
Sau96I	GGNCC	3 cut(s)	260, 1202, 1480
ScaI	AGTACT	1 cut(s)	1212
ScrFI	CCNGG	1 cut(s)	135
SduI	GDGCHC	3 cut(s)	134, 862, 922
SfaNI	GCATC	3 cut(s)	550, 721, 901
SfcI	CTRYAG	1 cut(s)	1020
Sfr274I	CTCGAG	1 cut(s)	210
SfuI	TTCGAA	2 cut(s)	1455, 1462
SinI	GGWCC	3 cut(s)	260, 1202, 1480
SlaI	CTCGAG	1 cut(s)	210
SmiMI	CAYNNNNRTG	4 cut(s)	71, 515, 626, 1397
SmlI	CTYRAG	1 cut(s)	210
SmoI	CTYRAG	1 cut(s)	210
SpeI	ACTAGT	1 cut(s)	1207
SsiI	CCGC	6 cut(s)	124, 520, 614, 865, 1127, 1151
SspI	AATATT	1 cut(s)	1099
SspMI	CTAG	3 cut(s)	366, 735, 1208
SstI	GAGCTC	1 cut(s)	862
StyD4I	CCNGG	1 cut(s)	133
StyI	CCWWGG	2 cut(s)	543, 1026
TaaI	ACNGT	3 cut(s)	825, 1021, 1302
TaiI	ACGT	1 cut(s)	600
TaqI	TCGA	5 cut(s)	19, 211, 1455, 1462, 1641
TaqII	GACCGA	1 cut(s)	1278
TatI	WGTACW	1 cut(s)	1210
TauI	GCSGC	1 cut(s)	1130
TfiI	GAWTC	4 cut(s)	150, 374, 1546, 1690
Tru1I	TTAA	3 cut(s)	11, 645, 1699
Tru9I	TTAA	3 cut(s)	11, 645, 1699
TscAI	CASTG	4 cut(s)	109, 176, 898, 1662
TseFI	GTSAC	3 cut(s)	569, 889, 1142
TseI	GCWGC	2 cut(s)	1078, 1081
Tsp45I	GTSAC	3 cut(s)	569, 889, 1142
TspDTI	ATGAA	6 cut(s)	174, 426, 503, 512, 807, 1071
TspGWI	ACGGA	4 cut(s)	401, 409, 638, 1501
TspRI	CASTG	4 cut(s)	109, 176, 898, 1662
VneI	GTGCAC	1 cut(s)	918
VpaK11BI	GGWCC	3 cut(s)	260, 1202, 1480
VspI	ATTAAT	1 cut(s)	11
XapI	RAATTY	3 cut(s)	338, 1009, 1451
XceI	RCATGY	1 cut(s)	70
XcmI	CCANNNNNNNNNTGG	1 cut(s)	84
XhoI	CTCGAG	1 cut(s)	210
XmiI	GTMKAC	1 cut(s)	827
XmnI	GAANNNNTTC	2 cut(s)	450, 1062
XspI	CTAG	3 cut(s)	366, 735, 1208
ZrmI	AGTACT	1 cut(s)	1212
Zsp2I	ATGCAT	1 cut(s)	1056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.