Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002865

Physical Location & Seq

Genomic Coordinates Reverse (-)

1965401 .. 1970893

Gene Structure 5493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0012300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGGAGATGGGAATACCAAGAAAAGCAAGCTCTCATGGTCAAAGAAAATGGTCAGGAAGTGGTTCAATATCAAGAGCAAAACTGAGGACTTTCAGGCAGATGATGTTGTTTATGGAGGAGCTGAGGTTGAATACAGGACTAGCTTCTCAGAGAGGGAACCGTGCACGATTAAGAAAAGCAAAACAGAGAAATTCAGCAAGAACACAGAGCAGGTCCGTCGGCGGAAGATGAATCTTGACCATCCTCGAATCATAGATGTGCAGAACCATAGCATTTTTGTTGCTACATGGAATGTGGCCGGAAGATCTCCACCAAGCAATTTAAATATGGATGAGTGGCTTCATGCCTCACCTCCTGCAGACATTTATGTTCTCGGGTTTCAAGAGATAGTTCCACTAAATGCTGGTAATGTTCTGGGGGCAGAAGACAATGGACCTGCCAAAAAATGGTTGGCTCTCATCCGGAAGACTTTAAACAATCTTCCTGGTACTAGTGGTGGCGGTGGCTGCTATACACCATCTCCCATCCCACAGCCAATTGTCGAGTTACATGCAGATTTTGAGGGATCTGCTAGGCAGAAGAGCTCATCTTTTTTTCAAAGGAGATCATTCCAGGCAACCCCCAGCTGGAGAACGGAGAATGACCCTTCAGCTTCACAACCCCGACTTGATCGAAGATTCAGTGTTTGTGATCGGGTGATCTTTGGTCACAGGCCAAGTGACTATGATCCCAACTTCAGATGGGGTCACAGGCCAAGTGACTATTCAAGGCCTAGTGACTACTCAGGGCCGAGTGACTATTATTCTAGGCCGAGTGACTACTCAAGGCCGAGTGACTTTTCCAGGTGGGGTTCGTCTGATGATGATAATGGACCAGGCGATTCACCAAGTACTGTTTTATTCTCACCAATGTCCTATGCTGGATCTGCATCCAATGAAAATGGATATAGAATGCCAGGGCATTCAAGGTACAACTTAGTTGCAAGCAAGCAAATGGTGGGCATATTTCTTACAGTATGGGTCAGAAGTGAACTGAGGGATCATGTTAAAAACATGAAAGTATCATGTGTTGGAAGAGGACTAATGGGATACCTTGGAAATAAGGGATCCATTTCAGTCAGCATGTCTTTGCACGATACAACCTTTTGCTTTATTTGTACTCATTTAACCTCAGGACAGAAGGAGGGTGATGAGCTAAGAAGGAATTCTGATGTCATGGAGATCCTTAGGAAGACAAGGTTTCCAAAGGTTAATGGCTCTAGCGCGTTGAAAAACCCAGAAACAATCCTGGAGCATGATCGAGTTATTTGGCTTGGGGATTTAAATTATCGGATTTCCCTCTCTTACCGCTCTGCTAAGGCATTAGTTGAGATGCAAAACTGGAGGGCCTTGTTAGAGAACGACCAGTTAAGGATAGAGCAAAAACGTGGTCGTGTATTTGTGGGCTGGAATGAGGGGAAGATTTACTTCCCACCAACTTACAAGTATTCTACTAATTCAGACAGATATGCAGGGGATGATATGCACCCAAAGGAGAAACGTCGAACACCTGCTTGGTGTGATCGAATATTGTGGTATGGTGAAGGTCTCCAACAGTTATCTTATGTCCGTGGGGAATCTAGGTTCTCAGATCATAGACCAGTTTATGGCATATTTTGGGCGGAGGTCGAGTCAAGTCACAACAAACTGAAGAAAAGCACTAGTTATTCTAGTTCTAGGATTGAAGTAGAGGAGCTTCTGCCATATTCACATGGATATACTGAGCTAAACTTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009506 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

592

Amino Acids

67.66

Weight (kDa)

9.21

Isoelectric Point (pI)

52.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	96 - 160	8.9e-07	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	319 - 550	2.2e-64	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002865)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06912
pyrus_communis	pycom14g06520
rosa_chinensis	RchiOBHm_Chr4g0398821 RchiOBHm_Chr4g0398831 RchiOBHm_Chr4g0398851 RchiOBHm_Chr4g0398861
rosa_laevigata	RLG00000009311 RLG00000009312 RLG00000009316
rosa_multiflora	Rmu_sc0002885.1_g000007 Rmu_sc0002885.1_g000009 Rmu_sc0004474.1_g000001 Rmu_sc0004751.1_g000005
rosa_roxburghii	Rroxscaffold_173G00435010 Rroxscaffold_5G00343860 Rroxscaffold_5G00343900 Rroxscaffold_5G00355000
rosa_rugosa	Rorug04G0012100 Rorug04G0012300 Rorug04G0012400 Rorug04G0012600
rosa_samantha	Rh4AG090100 Rh4AG090400 Rh4BG087200 Rh4BG087500 Rh4BG087600 Rh4BG087700 Rh4CG098200 Rh4CG098400 Rh4CG098700 Rh4DG081500 Rh4DG081600 Rh4DG081800 Rh4DG082000 Rh4DG082300 Rh4DG082700
rosa_wichuraiana	Rw4G007420 Rw4G007440 Rw4G007480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1558
Acc36I	ACCTGC	3 cut(s)	202, 445, 1558
AccB7I	CCANNNNNTGG	2 cut(s)	447, 1646
AccBSI	CCGCTC	1 cut(s)	1350
AccII	CGCG	1 cut(s)	1265
AccIII	TCCGGA	1 cut(s)	462
AciI	CCGC	4 cut(s)	223, 501, 1348, 1661
AclWI	GGATC	7 cut(s)	574, 722, 931, 1047, 1101, 1114, 1216
AcoI	YGGCCR	1 cut(s)	297
AcsI	RAATTY	2 cut(s)	191, 1204
AcuI	CTGAAG	3 cut(s)	633, 721, 1709
AfaI	GTAC	4 cut(s)	490, 892, 971, 1159
AfiI	CCNNNNNNNGG	3 cut(s)	447, 627, 1646
AgsI	TTSAA	8 cut(s)	67, 131, 383, 599, 768, 966, 1270, 1724
AhlI	ACTAGT	2 cut(s)	491, 1700
AjnI	CCWGG	6 cut(s)	484, 612, 842, 874, 955, 1287
AjuI	GAANNNNNNNTTGG	4 cut(s)	748, 780, 1537, 1569
AloI	GAACNNNNNNTCC	2 cut(s)	1607, 1639
AluBI	AGCT	9 cut(s)	31, 122, 144, 585, 627, 653, 1195, 1735, 1765
AluI	AGCT	9 cut(s)	31, 122, 144, 585, 627, 653, 1195, 1735, 1765
Alw21I	GWGCWC	2 cut(s)	167, 587
Alw26I	GTCTC	1 cut(s)	1592
Alw44I	GTGCAC	1 cut(s)	163
AlwI	GGATC	7 cut(s)	574, 722, 931, 1047, 1101, 1114, 1216
Ama87I	CYCGRG	1 cut(s)	374
Aor13HI	TCCGGA	1 cut(s)	462
AoxI	GGCC	8 cut(s)	297, 713, 752, 770, 788, 809, 827, 1386
ApaLI	GTGCAC	1 cut(s)	163
ApeKI	GCWGC	1 cut(s)	507
ApoI	RAATTY	2 cut(s)	191, 1204
ArsI	GACNNNNNNTTYG	2 cut(s)	1414, 1446
Asp700I	GAANNNNTTC	2 cut(s)	62, 1204
AspLEI	GCGC	1 cut(s)	1265
AspS9I	GGNCC	5 cut(s)	214, 434, 788, 872, 1386
AsuHPI	GGTGA	6 cut(s)	342, 709, 876, 897, 1199, 1592
AvaI	CYCGRG	1 cut(s)	374
AvaII	GGWCC	3 cut(s)	214, 434, 872
AxyI	CCTNAGG	2 cut(s)	1171, 1226
BaeGI	GKGCMC	1 cut(s)	167
BamHI	GGATCC	1 cut(s)	1106
BanII	GRGCYC	1 cut(s)	587
BarI	GAAGNNNNNNTAC	2 cut(s)	1719, 1751
BbsI	GAAGAC	3 cut(s)	432, 473, 1238
Bbv12I	GWGCWC	2 cut(s)	167, 587
BbvCI	CCTCAGC	1 cut(s)	123
BbvI	GCAGC	1 cut(s)	494
BccI	CCATC	5 cut(s)	2, 249, 526, 533, 735
BcgI	CGANNNNNNTGC	4 cut(s)	200, 234, 533, 567
BciT130I	CCWGG	6 cut(s)	486, 614, 844, 876, 957, 1289
BciVI	GTATCC	1 cut(s)	1082
BcoDI	GTCTC	1 cut(s)	1592
BcuI	ACTAGT	2 cut(s)	491, 1700
BfmI	CTRYAG	1 cut(s)	357
BfuAI	ACCTGC	3 cut(s)	202, 445, 1558
BfuI	GTATCC	1 cut(s)	1082
BglII	AGATCT	1 cut(s)	305
BisI	GCNGC	1 cut(s)	508
BlsI	GCNGC	1 cut(s)	509
BmcAI	AGTACT	1 cut(s)	892
Bme1390I	CCNGG	6 cut(s)	486, 614, 844, 876, 957, 1289
Bme18I	GGWCC	3 cut(s)	214, 434, 872
BmeT110I	CYCGRG	1 cut(s)	374
BmgT120I	GGNCC	5 cut(s)	214, 434, 788, 872, 1386
BmiI	GGNNCC	2 cut(s)	159, 1108
BmrFI	CCNGG	6 cut(s)	486, 614, 844, 876, 957, 1289
BmsI	GCATC	2 cut(s)	938, 1362
BpiI	GAAGAC	3 cut(s)	432, 473, 1238
BpmI	CTGGAG	3 cut(s)	649, 1310, 1402
Bpu10I	CCTNAGC	2 cut(s)	123, 1356
BpuEI	CTTGAG	1 cut(s)	808
BsaBI	GATNNNNATC	1 cut(s)	928
BsaI	GGTCTC	1 cut(s)	1592
BsaJI	CCNNGG	3 cut(s)	956, 1093, 1609
BsaWI	WCCGGW	1 cut(s)	462
BsaXI	ACNNNNNCTCC	6 cut(s)	111, 141, 505, 535, 1655, 1685
Bsc4I	CCNNNNNNNGG	3 cut(s)	447, 627, 1646
Bse1I	ACTGG	3 cut(s)	1385, 1405, 1640
Bse21I	CCTNAGG	2 cut(s)	1171, 1226
Bse8I	GATNNNNATC	1 cut(s)	928
BseAI	TCCGGA	1 cut(s)	462
BseBI	CCWGG	6 cut(s)	486, 614, 844, 876, 957, 1289
BseDI	CCNNGG	3 cut(s)	956, 1093, 1609
BseGI	GGATG	6 cut(s)	241, 337, 459, 525, 929, 1522
BseJI	GATNNNNATC	1 cut(s)	928
BseLI	CCNNNNNNNGG	3 cut(s)	447, 627, 1646
BseMII	CTCAG	8 cut(s)	75, 114, 162, 798, 1025, 1185, 1641, 1752
BseNI	ACTGG	3 cut(s)	1385, 1405, 1640
BseRI	GAGGAG	2 cut(s)	132, 1745
BseSI	GKGCMC	1 cut(s)	167
BseXI	GCAGC	1 cut(s)	494
BseYI	CCCAGC	1 cut(s)	623
BsgI	GTGCAG	1 cut(s)	281
Bsh1236I	CGCG	1 cut(s)	1265
BshFI	GGCC	8 cut(s)	299, 715, 754, 772, 790, 811, 829, 1388
BsiHKAI	GWGCWC	2 cut(s)	167, 587
BsiHKCI	CYCGRG	1 cut(s)	374
BsiSI	CCGG	2 cut(s)	300, 463
BslI	CCNNNNNNNGG	3 cut(s)	447, 627, 1646
BsmAI	GTCTC	1 cut(s)	1592
BsmI	GAATGC	2 cut(s)	957, 961
BsnI	GGCC	8 cut(s)	299, 715, 754, 772, 790, 811, 829, 1388
Bso31I	GGTCTC	1 cut(s)	1592
BsoBI	CYCGRG	1 cut(s)	374
Bsp1286I	GDGCHC	2 cut(s)	167, 587
Bsp13I	TCCGGA	1 cut(s)	462
BspACI	CCGC	4 cut(s)	223, 501, 1348, 1661
BspANI	GGCC	8 cut(s)	299, 715, 754, 772, 790, 811, 829, 1388
BspCNI	CTCAG	8 cut(s)	76, 115, 161, 797, 1026, 1184, 1640, 1753
BspEI	TCCGGA	1 cut(s)	462
BspFNI	CGCG	1 cut(s)	1265
BspLI	GGNNCC	2 cut(s)	159, 1108
BspMAI	CTGCAG	1 cut(s)	361
BspMI	ACCTGC	3 cut(s)	202, 445, 1558
BspPI	GGATC	7 cut(s)	574, 722, 931, 1047, 1101, 1114, 1216
BspQI	GCTCTTC	1 cut(s)	575
BspTNI	GGTCTC	1 cut(s)	1592
BsrBI	CCGCTC	1 cut(s)	1350
BsrI	ACTGG	3 cut(s)	1385, 1405, 1640
BssECI	CCNNGG	3 cut(s)	956, 1093, 1609
BssT1I	CCWWGG	1 cut(s)	1093
Bst2UI	CCWGG	6 cut(s)	486, 614, 844, 876, 957, 1289
Bst4CI	ACNGT	4 cut(s)	162, 895, 1015, 1596
Bst6I	CTCTTC	2 cut(s)	575, 1069
BstC8I	GCNNGC	3 cut(s)	29, 985, 989
BstDSI	CCRYGG	1 cut(s)	1609
BstF5I	GGATG	6 cut(s)	241, 337, 459, 525, 929, 1522
BstFNI	CGCG	1 cut(s)	1265
BstHHI	GCGC	1 cut(s)	1265
BstMAI	GTCTC	1 cut(s)	1592
BstMWI	GCNNNNNNNGC	2 cut(s)	507, 926
BstNI	CCWGG	6 cut(s)	486, 614, 844, 876, 957, 1289
BstNSI	RCATGY	2 cut(s)	554, 1126
BstSCI	CCNGG	6 cut(s)	484, 612, 842, 874, 955, 1287
BstSFI	CTRYAG	1 cut(s)	357
BstSLI	GKGCMC	1 cut(s)	167
BstUI	CGCG	1 cut(s)	1265
BstV1I	GCAGC	1 cut(s)	494
BstV2I	GAAGAC	3 cut(s)	432, 473, 1238
BstX2I	RGATCY	5 cut(s)	305, 566, 923, 1106, 1221
BstYI	RGATCY	5 cut(s)	305, 566, 923, 1106, 1221
Bsu36I	CCTNAGG	2 cut(s)	1171, 1226
BsuI	GTATCC	1 cut(s)	1082
BsuRI	GGCC	8 cut(s)	299, 715, 754, 772, 790, 811, 829, 1388
BtgI	CCRYGG	1 cut(s)	1609
BtsCI	GGATG	6 cut(s)	241, 337, 459, 525, 929, 1522
BtsIMutI	CAGTG	1 cut(s)	688
BveI	ACCTGC	3 cut(s)	202, 445, 1558
Cac8I	GCNNGC	3 cut(s)	29, 985, 989
CfoI	GCGC	1 cut(s)	1265
Cfr13I	GGNCC	5 cut(s)	214, 434, 788, 872, 1386
Csp6I	GTAC	4 cut(s)	489, 891, 970, 1158
CviQI	GTAC	4 cut(s)	489, 891, 970, 1158
DraI	TTTAAA	3 cut(s)	324, 474, 1323
EaeI	YGGCCR	1 cut(s)	297
Eam1104I	CTCTTC	2 cut(s)	575, 1069
EarI	CTCTTC	2 cut(s)	575, 1069
EciI	GGCGGA	2 cut(s)	238, 1676
Ecl136II	GAGCTC	1 cut(s)	585
Eco130I	CCWWGG	1 cut(s)	1093
Eco147I	AGGCCT	1 cut(s)	772
Eco24I	GRGCYC	1 cut(s)	587
Eco31I	GGTCTC	1 cut(s)	1592
Eco47I	GGWCC	3 cut(s)	214, 434, 872
Eco53kI	GAGCTC	1 cut(s)	585
Eco57I	CTGAAG	3 cut(s)	633, 721, 1709
Eco81I	CCTNAGG	2 cut(s)	1171, 1226
Eco88I	CYCGRG	1 cut(s)	374
EcoICRI	GAGCTC	1 cut(s)	585
EcoO109I	RGGNCCY	1 cut(s)	1386
EcoRI	GAATTC	1 cut(s)	1204
EcoRII	CCWGG	6 cut(s)	484, 612, 842, 874, 955, 1287
EcoT14I	CCWWGG	1 cut(s)	1093
EcoT38I	GRGCYC	1 cut(s)	587
ErhI	CCWWGG	1 cut(s)	1093
FalI	AAGNNNNNCTT	2 cut(s)	1451, 1483
Fnu4HI	GCNGC	1 cut(s)	508
FokI	GGATG	6 cut(s)	228, 344, 446, 512, 916, 1529
FriOI	GRGCYC	1 cut(s)	587
Fsp4HI	GCNGC	1 cut(s)	508
GlaI	GCGC	1 cut(s)	1264
GluI	GCNGC	1 cut(s)	508
GsaI	CCCAGC	1 cut(s)	627
GsuI	CTGGAG	3 cut(s)	649, 1310, 1402
HaeIII	GGCC	8 cut(s)	299, 715, 754, 772, 790, 811, 829, 1388
HapII	CCGG	2 cut(s)	300, 463
HhaI	GCGC	1 cut(s)	1265
Hin6I	GCGC	1 cut(s)	1263
HinP1I	GCGC	1 cut(s)	1263
HinfI	GANTC	6 cut(s)	232, 249, 678, 881, 1616, 1670
HpaII	CCGG	2 cut(s)	300, 463
HphI	GGTGA	6 cut(s)	342, 709, 876, 897, 1199, 1592
Hpy166II	GTNNAC	2 cut(s)	165, 1031
Hpy188I	TCNGA	9 cut(s)	151, 740, 859, 1025, 1210, 1332, 1501, 1630, 1778
Hpy188III	TCNNGA	6 cut(s)	55, 73, 236, 383, 463, 1173
Hpy8I	GTNNAC	2 cut(s)	165, 1031
Hpy99I	CGWCG	2 cut(s)	222, 1545
HpyAV	CCTTC	4 cut(s)	657, 1174, 1194, 1577
HpyCH4III	ACNGT	4 cut(s)	162, 895, 1015, 1596
HpyCH4IV	ACGT	2 cut(s)	1426, 1540
HpyF10VI	GCNNNNNNNGC	2 cut(s)	507, 926
HpySE526I	ACGT	2 cut(s)	1426, 1540
HspAI	GCGC	1 cut(s)	1263
Kpn2I	TCCGGA	1 cut(s)	462
LguI	GCTCTTC	1 cut(s)	575
LmnI	GCTCC	3 cut(s)	119, 1291, 1732
Lsp1109I	GCAGC	1 cut(s)	494
LweI	GCATC	2 cut(s)	938, 1362
MaeII	ACGT	2 cut(s)	1426, 1540
MbiI	CCGCTC	1 cut(s)	1350
MfeI	CAATTG	1 cut(s)	537
MflI	RGATCY	5 cut(s)	305, 566, 923, 1106, 1221
MhlI	GDGCHC	2 cut(s)	167, 587
MluCI	AATT	6 cut(s)	191, 319, 537, 1204, 1324, 1495
MlyI	GAGTC	1 cut(s)	1679
MmeI	TCCRAC	2 cut(s)	1051, 1615
MroI	TCCGGA	1 cut(s)	462
MroXI	GAANNNNTTC	2 cut(s)	62, 1204
MseI	TTAA	8 cut(s)	171, 323, 473, 1047, 1166, 1251, 1322, 1409
MslI	CAYNNNNRTG	1 cut(s)	257
MspA1I	CMGCKG	1 cut(s)	627
MspI	CCGG	2 cut(s)	300, 463
MspR9I	CCNGG	6 cut(s)	486, 614, 844, 876, 957, 1289
MunI	CAATTG	1 cut(s)	537
Mva1269I	GAATGC	2 cut(s)	957, 961
MvaI	CCWGG	6 cut(s)	486, 614, 844, 876, 957, 1289
MvnI	CGCG	1 cut(s)	1265
MwoI	GCNNNNNNNGC	2 cut(s)	507, 926
NlaIV	GGNNCC	2 cut(s)	159, 1108
NmeAIII	GCCGAG	3 cut(s)	816, 837, 855
NmuCI	GTSAC	9 cut(s)	707, 719, 746, 758, 776, 794, 815, 833, 1676
NspI	RCATGY	2 cut(s)	554, 1126
PaqCI	CACCTGC	1 cut(s)	1558
PceI	AGGCCT	1 cut(s)	772
PciSI	GCTCTTC	1 cut(s)	575
PctI	GAATGC	2 cut(s)	957, 961
PdmI	GAANNNNTTC	2 cut(s)	62, 1204
PfeI	GAWTC	5 cut(s)	232, 249, 678, 881, 1616
PflMI	CCANNNNNTGG	2 cut(s)	447, 1646
PfoI	TCCNGGA	1 cut(s)	1287
PkrI	GCNGC	1 cut(s)	509
PleI	GAGTC	1 cut(s)	1678
PpsI	GAGTC	1 cut(s)	1678
Psp124BI	GAGCTC	1 cut(s)	587
Psp6I	CCWGG	6 cut(s)	484, 612, 842, 874, 955, 1287
PspFI	CCCAGC	1 cut(s)	623
PspGI	CCWGG	6 cut(s)	484, 612, 842, 874, 955, 1287
PspN4I	GGNNCC	2 cut(s)	159, 1108
PspPI	GGNCC	5 cut(s)	214, 434, 788, 872, 1386
PstI	CTGCAG	1 cut(s)	361
PsuI	RGATCY	5 cut(s)	305, 566, 923, 1106, 1221
PvuII	CAGCTG	1 cut(s)	627
RsaI	GTAC	4 cut(s)	490, 892, 971, 1159
RsaNI	GTAC	4 cut(s)	489, 891, 970, 1158
RseI	CAYNNNNRTG	1 cut(s)	257
SacI	GAGCTC	1 cut(s)	587
SapI	GCTCTTC	1 cut(s)	575
SaqAI	TTAA	8 cut(s)	171, 323, 473, 1047, 1166, 1251, 1322, 1409
SatI	GCNGC	1 cut(s)	508
Sau96I	GGNCC	5 cut(s)	214, 434, 788, 872, 1386
ScaI	AGTACT	1 cut(s)	892
SchI	GAGTC	1 cut(s)	1679
ScrFI	CCNGG	6 cut(s)	486, 614, 844, 876, 957, 1289
SduI	GDGCHC	2 cut(s)	167, 587
SfaNI	GCATC	2 cut(s)	938, 1362
SfcI	CTRYAG	1 cut(s)	357
SinI	GGWCC	3 cut(s)	214, 434, 872
SmiI	ATTTAAAT	2 cut(s)	324, 1323
SmiMI	CAYNNNNRTG	1 cut(s)	257
SmlI	CTYRAG	1 cut(s)	823
SmoI	CTYRAG	1 cut(s)	823
SpeI	ACTAGT	2 cut(s)	491, 1700
Sse9I	AATT	6 cut(s)	191, 319, 537, 1204, 1324, 1495
SseBI	AGGCCT	1 cut(s)	772
SsiI	CCGC	4 cut(s)	223, 501, 1348, 1661
SspI	AATATT	1 cut(s)	1569
SstI	GAGCTC	1 cut(s)	587
StuI	AGGCCT	1 cut(s)	772
StyD4I	CCNGG	6 cut(s)	484, 612, 842, 874, 955, 1287
StyI	CCWWGG	1 cut(s)	1093
SwaI	ATTTAAAT	2 cut(s)	324, 1323
TaaI	ACNGT	4 cut(s)	162, 895, 1015, 1596
TaiI	ACGT	2 cut(s)	1429, 1543
TaqI	TCGA	7 cut(s)	247, 543, 673, 1300, 1543, 1564, 1668
TasI	AATT	6 cut(s)	191, 319, 537, 1204, 1324, 1495
TatI	WGTACW	2 cut(s)	890, 1157
TfiI	GAWTC	5 cut(s)	232, 249, 678, 881, 1616
Tru1I	TTAA	8 cut(s)	171, 323, 473, 1047, 1166, 1251, 1322, 1409
Tru9I	TTAA	8 cut(s)	171, 323, 473, 1047, 1166, 1251, 1322, 1409
TscAI	CASTG	1 cut(s)	688
TseFI	GTSAC	9 cut(s)	707, 719, 746, 758, 776, 794, 815, 833, 1676
TseI	GCWGC	1 cut(s)	507
Tsp45I	GTSAC	9 cut(s)	707, 719, 746, 758, 776, 794, 815, 833, 1676
TspDTI	ATGAA	4 cut(s)	245, 332, 951, 1070
TspGWI	ACGGA	3 cut(s)	206, 650, 1598
TspRI	CASTG	1 cut(s)	688
Van91I	CCANNNNNTGG	2 cut(s)	447, 1646
VneI	GTGCAC	1 cut(s)	163
VpaK11BI	GGWCC	3 cut(s)	214, 434, 872
XapI	RAATTY	2 cut(s)	191, 1204
XceI	RCATGY	2 cut(s)	554, 1126
XcmI	CCANNNNNNNNNTGG	1 cut(s)	448
XmnI	GAANNNNTTC	2 cut(s)	62, 1204
ZrmI	AGTACT	1 cut(s)	892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.