Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0001714

Physical Location & Seq

Genomic Coordinates Reverse (-)

649469 .. 652900

Gene Structure 3432 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010321

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGTCAGAACCTCAGCCACCCTCCGAGCCCACCCAGGAGCCAGAGAACGAGAAGTCCGCCTCACTCAGCAAAAAGGCCGCCAAGAAAGAAGCCGCCAAGCTCGAGAAGCTCCGTCGCCGCCAGGAGCAAGAAGCGGCGGCGGCGGCGGCTGCTCGCGCTGAGTCCGCCGAGCCGGAGGACCCGCTCGCCGCCAACTACGGCGACTTGCCGCTCATTCAGCTCCAATCGATGAGGATCGCCGACGTCAACGACTGGACGGAGGTCGGAGCGCTGACGGAGGCGTTGAAGGACCAGAAGGTTCTGATACGCGGCCGCGCGCAGACGATCCGAGCCGTCGGGAAGAACATGGCGTTTATTGTCGTCAGAGAGAAGGGATTCACGGTTCAGTGCGTCGCCACGGTGCAGCCGGAGATTGTCAGCCGTCAGATGGTCAAGTACGTGGCGGCGTTGAACCGCGAGTCCATTATTGACATTGAAGGGATTGTGTCTGTTCCCGGAATGGCAATTAAAGGAGCTTCACAGCAGGTGGAGGTGCAAGTCAGAAAGTTGTACTGTATAAGTAAGGCGGCTGTTTTGCCTATCAACATTGAGGATGCTGCTCGAAGTGATGCTGAAATTGAAAAAGCTAATCAGGCTGGAGAACAATTGGTTCGTGTAAATCAGGATACTCGCTTGAACTTCCGAGTACTTGACTTGCGAACACCGGCTAACCAGGGGATTTTCCGAATCCAGAGTCAAGTTGGAACTATCTTCAGGCAGTTCTTGCTGTCTGAAGGCTTTTTTGAAATCCACTCACCAAAACTGATCGCTGGTTCAAGTGAAGGTGGGGCTTCGGTGTTTAAACTGGACTACAAGGGGCAACCTGCCTGCCTTGCCCAGTCACCGCAGCTCCACAAGCAGATGGCCATCTGTGGTGACTTTGGTCGTATTTTTGAGATTGGTCCTGTTTTCAGAGCTGAGGACTCCTATACACATAGGCATCTATGTGAGTTCACTGGTCTCGATATTGAGATGGAGATTAAGTGGAGCTATTTTGAGGTTATGGATATTGTTAGCAGGTTGTTTGTTACTATGTTTGACTATTTGAACAAAAATTGTGAGAAGGAACTTGAAGCTGTACGGAGGCAGTATCCCTTCGAACCACTAAAGTACTTGCCTGAGACTCTACGTCTCACTTTTGCGGAAGGTGTTCAAATGCTAAAGGATGCTGGTGTCGAAGTTGATCCTATGGGGGACCTAAATACTGAAGCAGAGAGGAAGTTGGGCCAATTAGTTTTGGAAAAATATGGCACTGAGTTTTATATACTTCACCGCTATCCATTGGCTGTGAGGCCTTTTTATACCATGCCTTGCTGTGACAATAAGGAGTACAGTAATTCATTTGATGTCTTCATTCGAGGTGAGGAGATTATATCAGGTGCACAACGTGTCCATGTACCAGAGTTCTTGGCTGAACGTGCTGAAGCACGTGGAATTGAAGTCAAGACAATATCAACATATATTGATTCCTTCAGGTACTCTTTATCTTTTTTCTTGTGTATTTTACATGTTTCATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004815 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006422 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0016070 GO:0016874 GO:0016875 GO:0017101 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045202 GO:0046483 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0090304 GO:0098542 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2 tRNA_anti-codon

Protein Analysis

520

Amino Acids

58.4

Weight (kDa)

5.58

Isoelectric Point (pI)

48.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2	PF00152	220 - 507	3.7e-58	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26870 AT4G31180 AT4G31180
fragaria_vesca	FvH4_2g15870 FvH4_2g15910 FvH4_2g30550
malus_domestica	MD08G1134400.v1.1 MD12G1153800.v1.1 MD14G1143300.v1.1 MD15G1113400.v1.1
prunus_persica	Prupe.1G463800_v2.0.a1 Prupe.4G141600_v2.0.a1 Prupe.8G055000_v2.0.a1
pyrus_communis	pycom08g11340 pycom15g10170 pycom16g11710
rosa_chinensis	RchiOBHm_Chr5g0032141 RchiOBHm_Chr5g0032161 RchiOBHm_Chr6g0278871 RchiOBHm_Chr6g0312531
rosa_laevigata	RLG00000010321 RLG00000033368
rosa_multiflora	Rmu_co8427103.1_g000001 Rmu_sc0003031.1_g000023 Rmu_sc0005375.1_g000002 Rmu_sc0005375.1_g000011 Rmu_sc0008363.1_g000011 Rmu_sc0043080.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048240 Rroxscaffold_1G00048270 Rroxscaffold_7G00156770
rosa_rugosa	Rorug06G0119800 Rorug06G0120000 Rorug06G0123400 Rorug06G0396100 Rorug06G0396200
rosa_samantha	Rh5DG228900 Rh6AG228300 Rh6AG513500 Rh6BG233900 Rh6BG234000 Rh6BG524200 Rh6BG526500 Rh6CG236300 Rh6CG531400 Rh6DG515600
rosa_wichuraiana	Rw6G020030 Rw6G044650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	514
AatII	GACGTC	1 cut(s)	246
Acc36I	ACCTGC	3 cut(s)	514, 871, 1047
AccBSI	CCGCTC	2 cut(s)	184, 211
AccII	CGCG	5 cut(s)	156, 309, 315, 317, 456
AclWI	GGATC	3 cut(s)	242, 319, 1217
AcoI	YGGCCR	2 cut(s)	310, 903
AcuI	CTGAAG	5 cut(s)	736, 792, 1266, 1482, 1495
AcvI	CACGTG	1 cut(s)	1469
AcyI	GRCGYC	1 cut(s)	243
AdeI	CACNNNGTG	1 cut(s)	1427
AfaI	GTAC	8 cut(s)	437, 551, 687, 1119, 1151, 1370, 1437, 1517
AfeI	AGCGCT	1 cut(s)	270
AfiI	CCNNNNNNNGG	1 cut(s)	427
AflIII	ACRYGT	2 cut(s)	1426, 1546
AhdI	GACNNNNNGTC	1 cut(s)	1167
AjnI	CCWGG	3 cut(s)	33, 120, 711
AloI	GAACNNNNNNTCC	6 cut(s)	38, 70, 366, 398, 443, 475
AluBI	AGCT	9 cut(s)	100, 109, 220, 515, 626, 889, 956, 1029, 1115
AluI	AGCT	9 cut(s)	100, 109, 220, 515, 626, 889, 956, 1029, 1115
Alw21I	GWGCWC	1 cut(s)	1423
Alw26I	GTCTC	3 cut(s)	1004, 1154, 1175
Alw44I	GTGCAC	1 cut(s)	1419
AlwI	GGATC	3 cut(s)	242, 319, 1217
Ama87I	CYCGRG	1 cut(s)	101
Aor51HI	AGCGCT	1 cut(s)	270
AoxI	GGCC	5 cut(s)	75, 310, 903, 1264, 1331
ApaLI	GTGCAC	1 cut(s)	1419
ApeKI	GCWGC	4 cut(s)	149, 403, 596, 886
ArsI	GACNNNNNNTTYG	2 cut(s)	718, 750
Asp700I	GAANNNNTTC	2 cut(s)	374, 1188
AspLEI	GCGC	4 cut(s)	158, 271, 317, 319
AspS9I	GGNCC	5 cut(s)	178, 289, 941, 1234, 1264
AsuC2I	CCSGG	1 cut(s)	495
AsuHPI	GGTGA	5 cut(s)	786, 873, 926, 1301, 1412
AsuII	TTCGAA	1 cut(s)	1137
AvaI	CYCGRG	1 cut(s)	101
AvaII	GGWCC	4 cut(s)	178, 289, 941, 1234
BaeGI	GKGCMC	1 cut(s)	1423
BalI	TGGCCA	1 cut(s)	905
BanII	GRGCYC	1 cut(s)	30
BbrPI	CACGTG	1 cut(s)	1469
BbsI	GAAGAC	1 cut(s)	1381
Bbv12I	GWGCWC	1 cut(s)	1423
BbvCI	CCTCAGC	2 cut(s)	12, 957
BbvI	GCAGC	4 cut(s)	136, 415, 583, 898
BccI	CCATC	4 cut(s)	421, 895, 914, 1006
BceAI	ACGGC	3 cut(s)	214, 317, 405
BciT130I	CCWGG	3 cut(s)	35, 122, 713
BciVI	GTATCC	2 cut(s)	658, 1140
BcnI	CCSGG	1 cut(s)	495
BcoDI	GTCTC	3 cut(s)	1004, 1154, 1175
BfoI	RGCGCY	1 cut(s)	272
BfuAI	ACCTGC	3 cut(s)	514, 871, 1047
BfuI	GTATCC	2 cut(s)	658, 1140
BmcAI	AGTACT	2 cut(s)	687, 1151
Bme1390I	CCNGG	4 cut(s)	35, 122, 495, 713
Bme18I	GGWCC	4 cut(s)	178, 289, 941, 1234
BmeRI	GACNNNNNGTC	1 cut(s)	1167
BmeT110I	CYCGRG	1 cut(s)	101
BmgT120I	GGNCC	5 cut(s)	178, 289, 941, 1234, 1264
BmiI	GGNNCC	3 cut(s)	39, 180, 1235
BmrFI	CCNGG	4 cut(s)	35, 122, 495, 713
BmrI	ACTGGG	1 cut(s)	871
BmsI	GCATC	4 cut(s)	583, 598, 988, 1195
BmuI	ACTGGG	1 cut(s)	871
BoxI	GACNNNNGTC	2 cut(s)	260, 921
BpiI	GAAGAC	1 cut(s)	1381
BpmI	CTGGAG	1 cut(s)	657
Bpu10I	CCTNAGC	2 cut(s)	12, 957
Bpu14I	TTCGAA	1 cut(s)	1137
BpuMI	CCSGG	1 cut(s)	495
Bsa29I	ATCGAT	1 cut(s)	227
BsaAI	YACGTR	2 cut(s)	439, 1469
BsaBI	GATNNNNATC	2 cut(s)	233, 905
BsaHI	GRCGYC	1 cut(s)	243
BsaI	GGTCTC	1 cut(s)	1004
BsaJI	CCNNGG	3 cut(s)	33, 396, 712
BsaXI	ACNNNNNCTCC	4 cut(s)	873, 903, 1007, 1037
Bsc4I	CCNNNNNNNGG	1 cut(s)	427
Bse118I	RCCGGY	1 cut(s)	703
Bse1I	ACTGG	4 cut(s)	257, 849, 877, 1000
Bse8I	GATNNNNATC	2 cut(s)	233, 905
BseBI	CCWGG	3 cut(s)	35, 122, 713
BseCI	ATCGAT	1 cut(s)	227
BseDI	CCNNGG	3 cut(s)	33, 396, 712
BseGI	GGATG	2 cut(s)	598, 1210
BseJI	GATNNNNATC	2 cut(s)	233, 905
BseLI	CCNNNNNNNGG	1 cut(s)	427
BseMII	CTCAG	6 cut(s)	26, 79, 150, 948, 1149, 1284
BseNI	ACTGG	4 cut(s)	257, 849, 877, 1000
BsePI	GCGCGC	1 cut(s)	315
BseRI	GAGGAG	1 cut(s)	1418
BseSI	GKGCMC	1 cut(s)	1423
BseX3I	CGGCCG	1 cut(s)	310
BseXI	GCAGC	4 cut(s)	136, 415, 583, 898
BsgI	GTGCAG	1 cut(s)	422
Bsh1236I	CGCG	5 cut(s)	156, 309, 315, 317, 456
Bsh1285I	CGRYCG	1 cut(s)	313
BshFI	GGCC	5 cut(s)	77, 312, 905, 1266, 1333
BshVI	ATCGAT	1 cut(s)	227
BsiEI	CGRYCG	1 cut(s)	313
BsiHKAI	GWGCWC	1 cut(s)	1423
BsiHKCI	CYCGRG	1 cut(s)	101
BsiSI	CCGG	4 cut(s)	173, 407, 495, 704
BslFI	GGGAC	1 cut(s)	1247
BslI	CCNNNNNNNGG	1 cut(s)	427
BsmAI	GTCTC	3 cut(s)	1004, 1154, 1175
BsmBI	CGTCTC	1 cut(s)	1175
BsmFI	GGGAC	1 cut(s)	1247
BsnI	GGCC	5 cut(s)	77, 312, 905, 1266, 1333
Bso31I	GGTCTC	1 cut(s)	1004
BsoBI	CYCGRG	1 cut(s)	101
Bsp119I	TTCGAA	1 cut(s)	1137
Bsp1286I	GDGCHC	2 cut(s)	30, 1423
Bsp143I	GATC	4 cut(s)	234, 324, 804, 1222
BspANI	GGCC	5 cut(s)	77, 312, 905, 1266, 1333
BspCNI	CTCAG	6 cut(s)	25, 78, 151, 949, 1150, 1285
BspDI	ATCGAT	1 cut(s)	227
BspFNI	CGCG	5 cut(s)	156, 309, 315, 317, 456
BspLI	GGNNCC	3 cut(s)	39, 180, 1235
BspMI	ACCTGC	3 cut(s)	514, 871, 1047
BspPI	GGATC	3 cut(s)	242, 319, 1217
BspT104I	TTCGAA	1 cut(s)	1137
BspTNI	GGTCTC	1 cut(s)	1004
BsrBI	CCGCTC	2 cut(s)	184, 211
BsrFI	RCCGGY	1 cut(s)	703
BsrI	ACTGG	4 cut(s)	257, 849, 877, 1000
BssAI	RCCGGY	1 cut(s)	703
BssECI	CCNNGG	3 cut(s)	33, 396, 712
BssHII	GCGCGC	1 cut(s)	315
BssMI	GATC	4 cut(s)	234, 324, 804, 1222
BssNI	GRCGYC	1 cut(s)	243
Bst2UI	CCWGG	3 cut(s)	35, 122, 713
Bst4CI	ACNGT	4 cut(s)	382, 400, 554, 1373
BstACI	GRCGYC	1 cut(s)	243
BstAPI	GCANNNNNTGC	1 cut(s)	763
BstBAI	YACGTR	2 cut(s)	439, 1469
BstBI	TTCGAA	1 cut(s)	1137
BstC8I	GCNNGC	4 cut(s)	154, 186, 317, 868
BstDEI	CTNAG	6 cut(s)	12, 65, 159, 957, 1158, 1293
BstDSI	CCRYGG	1 cut(s)	396
BstF5I	GGATG	2 cut(s)	598, 1210
BstFNI	CGCG	5 cut(s)	156, 309, 315, 317, 456
BstH2I	RGCGCY	1 cut(s)	272
BstHHI	GCGC	4 cut(s)	158, 271, 317, 319
BstKTI	GATC	4 cut(s)	237, 327, 807, 1225
BstMAI	GTCTC	3 cut(s)	1004, 1154, 1175
BstMBI	GATC	4 cut(s)	234, 324, 804, 1222
BstMCI	CGRYCG	1 cut(s)	313
BstNI	CCWGG	3 cut(s)	35, 122, 713
BstNSI	RCATGY	1 cut(s)	1550
BstPAI	GACNNNNGTC	2 cut(s)	260, 921
BstSCI	CCNGG	4 cut(s)	33, 120, 493, 711
BstSLI	GKGCMC	1 cut(s)	1423
BstUI	CGCG	5 cut(s)	156, 309, 315, 317, 456
BstV1I	GCAGC	4 cut(s)	136, 415, 583, 898
BstV2I	GAAGAC	1 cut(s)	1381
BstZI	CGGCCG	1 cut(s)	310
Bsu15I	ATCGAT	1 cut(s)	227
BsuI	GTATCC	2 cut(s)	658, 1140
BsuRI	GGCC	5 cut(s)	77, 312, 905, 1266, 1333
BsuTUI	ATCGAT	1 cut(s)	227
BtgI	CCRYGG	1 cut(s)	396
BtsCI	GGATG	2 cut(s)	598, 1210
BtsIMutI	CAGTG	3 cut(s)	392, 993, 1290
BveI	ACCTGC	3 cut(s)	514, 871, 1047
Cac8I	GCNNGC	4 cut(s)	154, 186, 317, 868
CciNI	GCGGCCGC	1 cut(s)	310
CfoI	GCGC	4 cut(s)	158, 271, 317, 319
Cfr10I	RCCGGY	1 cut(s)	703
Cfr13I	GGNCC	5 cut(s)	178, 289, 941, 1234, 1264
ClaI	ATCGAT	1 cut(s)	227
CseI	GACGC	1 cut(s)	379
Csp6I	GTAC	8 cut(s)	436, 550, 686, 1118, 1150, 1369, 1436, 1516
CviAII	CATG	4 cut(s)	346, 1345, 1433, 1547
CviQI	GTAC	8 cut(s)	436, 550, 686, 1118, 1150, 1369, 1436, 1516
DdeI	CTNAG	6 cut(s)	12, 65, 159, 957, 1158, 1293
DpnI	GATC	4 cut(s)	236, 326, 806, 1224
DpnII	GATC	4 cut(s)	234, 324, 804, 1222
DraI	TTTAAA	1 cut(s)	841
DraIII	CACNNNGTG	1 cut(s)	1427
DriI	GACNNNNNGTC	1 cut(s)	1167
EaeI	YGGCCR	2 cut(s)	310, 903
EagI	CGGCCG	1 cut(s)	310
Eam1105I	GACNNNNNGTC	1 cut(s)	1167
EciI	GGCGGA	2 cut(s)	46, 154
EclXI	CGGCCG	1 cut(s)	310
Eco147I	AGGCCT	1 cut(s)	1333
Eco24I	GRGCYC	1 cut(s)	30
Eco31I	GGTCTC	1 cut(s)	1004
Eco47I	GGWCC	4 cut(s)	178, 289, 941, 1234
Eco47III	AGCGCT	1 cut(s)	270
Eco52I	CGGCCG	1 cut(s)	310
Eco57I	CTGAAG	5 cut(s)	736, 792, 1266, 1482, 1495
Eco72I	CACGTG	1 cut(s)	1469
Eco88I	CYCGRG	1 cut(s)	101
EcoO109I	RGGNCCY	2 cut(s)	178, 1234
EcoRII	CCWGG	3 cut(s)	33, 120, 711
EcoT38I	GRGCYC	1 cut(s)	30
Esp3I	CGTCTC	1 cut(s)	1175
FaeI	CATG	4 cut(s)	349, 1348, 1436, 1550
FaqI	GGGAC	1 cut(s)	1247
FatI	CATG	4 cut(s)	345, 1344, 1432, 1546
FauI	CCCGC	1 cut(s)	189
FokI	GGATG	2 cut(s)	605, 1217
FriOI	GRGCYC	1 cut(s)	30
GlaI	GCGC	4 cut(s)	157, 270, 316, 318
GsuI	CTGGAG	1 cut(s)	657
HaeII	RGCGCY	1 cut(s)	272
HaeIII	GGCC	5 cut(s)	77, 312, 905, 1266, 1333
HapII	CCGG	4 cut(s)	173, 407, 495, 704
HgaI	GACGC	1 cut(s)	379
HhaI	GCGC	4 cut(s)	158, 271, 317, 319
Hin1I	GRCGYC	1 cut(s)	243
Hin1II	CATG	4 cut(s)	349, 1348, 1436, 1550
Hin6I	GCGC	4 cut(s)	156, 269, 315, 317
HinP1I	GCGC	4 cut(s)	156, 269, 315, 317
HincII	GTYRAC	1 cut(s)	247
HindII	GTYRAC	1 cut(s)	247
HinfI	GANTC	8 cut(s)	161, 375, 458, 726, 733, 962, 1162, 1505
HpaII	CCGG	4 cut(s)	173, 407, 495, 704
HphI	GGTGA	5 cut(s)	786, 873, 926, 1301, 1412
Hpy166II	GTNNAC	3 cut(s)	247, 993, 1421
Hpy188III	TCNNGA	6 cut(s)	103, 337, 662, 730, 1001, 1483
Hpy8I	GTNNAC	3 cut(s)	247, 993, 1421
Hpy99I	CGWCG	4 cut(s)	117, 245, 338, 395
HpyCH4III	ACNGT	4 cut(s)	382, 400, 554, 1373
HpyCH4IV	ACGT	6 cut(s)	243, 438, 1168, 1426, 1456, 1468
HpyCH4V	TGCA	3 cut(s)	403, 535, 1421
HpyF3I	CTNAG	6 cut(s)	12, 65, 159, 957, 1158, 1293
HpySE526I	ACGT	6 cut(s)	243, 438, 1168, 1426, 1456, 1468
Hsp92I	GRCGYC	1 cut(s)	243
Hsp92II	CATG	4 cut(s)	349, 1348, 1436, 1550
HspAI	GCGC	4 cut(s)	156, 269, 315, 317
Kzo9I	GATC	4 cut(s)	234, 324, 804, 1222
LmnI	GCTCC	8 cut(s)	37, 114, 124, 225, 266, 512, 894, 1026
Lsp1109I	GCAGC	4 cut(s)	136, 415, 583, 898
LweI	GCATC	4 cut(s)	583, 598, 988, 1195
MaeII	ACGT	6 cut(s)	243, 438, 1168, 1426, 1456, 1468
MaeIII	GTNAC	4 cut(s)	879, 914, 1066, 1355
MalI	GATC	4 cut(s)	236, 326, 806, 1224
MbiI	CCGCTC	2 cut(s)	184, 211
MboI	GATC	4 cut(s)	234, 324, 804, 1222
MboII	GAAGA	3 cut(s)	352, 742, 1381
MfeI	CAATTG	1 cut(s)	644
MhlI	GDGCHC	2 cut(s)	30, 1423
MlsI	TGGCCA	1 cut(s)	905
MluCI	AATT	7 cut(s)	504, 615, 644, 1093, 1268, 1375, 1473
MluNI	TGGCCA	1 cut(s)	905
MlyI	GAGTC	5 cut(s)	170, 467, 742, 956, 1156
MmeI	TCCRAC	2 cut(s)	244, 721
Mox20I	TGGCCA	1 cut(s)	905
MroXI	GAANNNNTTC	2 cut(s)	374, 1188
MscI	TGGCCA	1 cut(s)	905
MseI	TTAA	4 cut(s)	507, 840, 1020, 1558
MslI	CAYNNNNRTG	1 cut(s)	984
Msp20I	TGGCCA	1 cut(s)	905
MspI	CCGG	4 cut(s)	173, 407, 495, 704
MspR9I	CCNGG	4 cut(s)	35, 122, 495, 713
MssI	GTTTAAAC	1 cut(s)	841
MunI	CAATTG	1 cut(s)	644
MvaI	CCWGG	3 cut(s)	35, 122, 713
MvnI	CGCG	5 cut(s)	156, 309, 315, 317, 456
NciI	CCSGG	1 cut(s)	495
NdeII	GATC	4 cut(s)	234, 324, 804, 1222
NlaIII	CATG	4 cut(s)	349, 1348, 1436, 1550
NlaIV	GGNNCC	3 cut(s)	39, 180, 1235
NmeAIII	GCCGAG	1 cut(s)	193
NmuCI	GTSAC	3 cut(s)	879, 914, 1355
NotI	GCGGCCGC	1 cut(s)	310
NspI	RCATGY	1 cut(s)	1550
NspV	TTCGAA	1 cut(s)	1137
PaeR7I	CTCGAG	1 cut(s)	101
PaqCI	CACCTGC	1 cut(s)	514
PauI	GCGCGC	1 cut(s)	315
PceI	AGGCCT	1 cut(s)	1333
PciI	ACATGT	1 cut(s)	1546
PdmI	GAANNNNTTC	2 cut(s)	374, 1188
PfeI	GAWTC	3 cut(s)	375, 726, 1505
PfoI	TCCNGGA	1 cut(s)	493
PleI	GAGTC	5 cut(s)	169, 466, 741, 956, 1156
PmaCI	CACGTG	1 cut(s)	1469
PmeI	GTTTAAAC	1 cut(s)	841
PmlI	CACGTG	1 cut(s)	1469
PpsI	GAGTC	5 cut(s)	169, 466, 741, 956, 1156
Ppu21I	YACGTR	2 cut(s)	439, 1469
PpuMI	RGGWCCY	2 cut(s)	178, 1234
PscI	ACATGT	1 cut(s)	1546
PshAI	GACNNNNGTC	2 cut(s)	260, 921
Psp5II	RGGWCCY	2 cut(s)	178, 1234
Psp6I	CCWGG	3 cut(s)	33, 120, 711
PspCI	CACGTG	1 cut(s)	1469
PspGI	CCWGG	3 cut(s)	33, 120, 711
PspN4I	GGNNCC	3 cut(s)	39, 180, 1235
PspPI	GGNCC	5 cut(s)	178, 289, 941, 1234, 1264
PspPPI	RGGWCCY	2 cut(s)	178, 1234
PteI	GCGCGC	1 cut(s)	315
RsaI	GTAC	8 cut(s)	437, 551, 687, 1119, 1151, 1370, 1437, 1517
RsaNI	GTAC	8 cut(s)	436, 550, 686, 1118, 1150, 1369, 1436, 1516
RseI	CAYNNNNRTG	1 cut(s)	984
SaqAI	TTAA	4 cut(s)	507, 840, 1020, 1558
Sau3AI	GATC	4 cut(s)	234, 324, 804, 1222
Sau96I	GGNCC	5 cut(s)	178, 289, 941, 1234, 1264
ScaI	AGTACT	2 cut(s)	687, 1151
SchI	GAGTC	5 cut(s)	170, 467, 742, 956, 1156
ScrFI	CCNGG	4 cut(s)	35, 122, 495, 713
SduI	GDGCHC	2 cut(s)	30, 1423
SfaNI	GCATC	4 cut(s)	583, 598, 988, 1195
Sfr274I	CTCGAG	1 cut(s)	101
SfuI	TTCGAA	1 cut(s)	1137
SinI	GGWCC	4 cut(s)	178, 289, 941, 1234
SlaI	CTCGAG	1 cut(s)	101
SmiMI	CAYNNNNRTG	1 cut(s)	984
SmlI	CTYRAG	1 cut(s)	101
SmoI	CTYRAG	1 cut(s)	101
Sse9I	AATT	7 cut(s)	504, 615, 644, 1093, 1268, 1375, 1473
SseBI	AGGCCT	1 cut(s)	1333
StuI	AGGCCT	1 cut(s)	1333
StyD4I	CCNGG	4 cut(s)	33, 120, 493, 711
TaaI	ACNGT	4 cut(s)	382, 400, 554, 1373
TaiI	ACGT	6 cut(s)	246, 441, 1171, 1429, 1459, 1471
TaqI	TCGA	7 cut(s)	102, 227, 601, 1002, 1137, 1215, 1396
TasI	AATT	7 cut(s)	504, 615, 644, 1093, 1268, 1375, 1473
TatI	WGTACW	4 cut(s)	549, 685, 1149, 1368
TfiI	GAWTC	3 cut(s)	375, 726, 1505
Tru1I	TTAA	4 cut(s)	507, 840, 1020, 1558
Tru9I	TTAA	4 cut(s)	507, 840, 1020, 1558
TscAI	CASTG	3 cut(s)	392, 1000, 1297
TseFI	GTSAC	3 cut(s)	879, 914, 1355
TseI	GCWGC	4 cut(s)	149, 403, 596, 886
Tsp45I	GTSAC	3 cut(s)	879, 914, 1355
TspDTI	ATGAA	3 cut(s)	1368, 1381, 1542
TspGWI	ACGGA	4 cut(s)	101, 272, 290, 1135
TspRI	CASTG	3 cut(s)	392, 1000, 1297
VneI	GTGCAC	1 cut(s)	1419
VpaK11BI	GGWCC	4 cut(s)	178, 289, 941, 1234
XceI	RCATGY	1 cut(s)	1550
XcmI	CCANNNNNNNNNTGG	1 cut(s)	737
XhoI	CTCGAG	1 cut(s)	101
XmnI	GAANNNNTTC	2 cut(s)	374, 1188
ZraI	GACGTC	1 cut(s)	244
ZrmI	AGTACT	2 cut(s)	687, 1151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.