Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0001714

Physical Location & Seq

Genomic Coordinates Forward (+)

40016454 .. 40018212

Gene Structure 1759 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG236300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGTCTCATCCAGAATCTCAGCCAGCCACCGAGCTCAGCCACGAGCCAGAGAACGAGGAGTCGGCCTCTCTTAGCAAAAAGGCAGCAAAGAAAAAAGCGGCCAAGCTTGAGAAGCTCCGTCGCCGCCAGGAGCGAGAAGCAGCGACCGCCACGGCTCGCGCTGATCAGTACTCCGCCGCGCCGGAGGACCAACTCGCAGCGAACTATGGCGACGTGTCACTCATTCAGCTCCAGTCGATGAAGATGGTCGACGTCAATCTTCGGACGGAGGTCGGAGCTCTAACTGAGGCGTTGAAGGACCAGAAGGTTCGGATACGCGGCCGTGCGCAGACGATTAGACCCACCGGGGAGAAGCTGGCGTTTATTGTGGTCAGAGAGAAGGGGTTCACGGTTCAGTGCGTCGTGACGGTTCAGCCGGAGATAGTGAGCTGTCAGATGGTGAAGTACGCGTCGAAGTTGAGCCGCGAGTCGATTATTGACATTGAAGGGATTGTGTCTAAACCTGATATGGCAATTGCAGGCGCTTCACAGCAGGTGGATGTGCAAGTTAGAAAGTTGTACTGTATAAGTAGGGCTGCTGTTTTACCTATTGAAATTGAGAATGCTGCTCGAAGTGAAAAACCTAATGAGGATGGACAGAATACTCGCTTGAATAACCGAGTACTTGACTTGCGAACAGCGGCTAACCGGGGGATTTTCCGAATCCAGAGTCAAGTTGGAACTATCTTCAGGCAGTTCTTGCTGTCGGAAGGGTTTATTGAAATCCATACACCAAAACTGATCGCTGGTTCAAGTGAAGGTGGGGCTTCGGTGTTTAAACTGGACTACGTGAAGGGGCAACCTGCCTGCCTTGCCCAGTCACCGCAGCTCCACAAGCAGATGTCCATCTGTGCTGACTTTGGTCGTGTTTTCGAGGTTGGTTCTGTTTTCAGAGCTGAGAACTCTGATACACATAGGCATCTATGTGAGTTCACTGGTCTCGATATTGAGATGGAGATTGAGTGGAGCTATTTTGAGGTTATGGATATTGTTAACAGGTTGTTTGTCAATATGTTTGACTATTTGAACAAAAATTGTGAGAAGGAACTTGAAGCTGTACGAGGGCAGTATCCCGTCGAACCATTAAAGTACTTGCCTGAGACTCTACGTCTCACCTTCGCGGAAGGTGTTCAAATGCTAAAGGATGCCGGTGTGGAAGTTGATCCTATGGGGGACTTAGATACTAAAAAAGAGAGGAAGTTGGGCCAAATAGTTTTGGAGAAATATGGCACTGAGTTCTACATACTTCACCGCTATCCGTTGGCTGTGAGGCCTTTCTATACCATGCCTTGCGACGATAATCCTGAATACAGCAATTCGTTTGACGTCTTCATTCGAGGTGAGGAGATCATATCAGGGGCACAACGTATCCATGTACCAGAATTATTGATCGAACGTGCTTCAGCACGTGGAATTGAAGTAGAGACAATATCAACATATATTGATTCCTTCAGATATGGTGCACCTCCCCATGGTGGATTTGGAGTAGGGCTGGAGCGTGTTGTGATGCTCTTCTGTGGTTTGAATAACATCCGCAAAACATCTTTATTCCCGCGTGATCCAGACCGGCTAGCGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004815 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006422 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0016070 GO:0016874 GO:0016875 GO:0017101 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045202 GO:0046483 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0090304 GO:0098542 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2 tRNA_anti-codon

Protein Analysis

539

Amino Acids

60.53

Weight (kDa)

5.99

Isoelectric Point (pI)

44.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2	PF00152	213 - 533	1.3e-78	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26870 AT4G31180 AT4G31180
fragaria_vesca	FvH4_2g15870 FvH4_2g15910 FvH4_2g30550
malus_domestica	MD08G1134400.v1.1 MD12G1153800.v1.1 MD14G1143300.v1.1 MD15G1113400.v1.1
prunus_persica	Prupe.1G463800_v2.0.a1 Prupe.4G141600_v2.0.a1 Prupe.8G055000_v2.0.a1
pyrus_communis	pycom08g11340 pycom15g10170 pycom16g11710
rosa_chinensis	RchiOBHm_Chr5g0032141 RchiOBHm_Chr5g0032161 RchiOBHm_Chr6g0278871 RchiOBHm_Chr6g0312531
rosa_laevigata	RLG00000010321 RLG00000033368
rosa_multiflora	Rmu_co8427103.1_g000001 Rmu_sc0003031.1_g000023 Rmu_sc0005375.1_g000002 Rmu_sc0005375.1_g000011 Rmu_sc0008363.1_g000011 Rmu_sc0043080.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048240 Rroxscaffold_1G00048270 Rroxscaffold_7G00156770
rosa_rugosa	Rorug06G0119800 Rorug06G0120000 Rorug06G0123400 Rorug06G0396100 Rorug06G0396200
rosa_samantha	Rh5DG228900 Rh6AG228300 Rh6AG513500 Rh6BG233900 Rh6BG234000 Rh6BG524200 Rh6BG526500 Rh6CG236300 Rh6CG531400 Rh6DG515600
rosa_wichuraiana	Rw6G020030 Rw6G044650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	523
AatII	GACGTC	2 cut(s)	255, 1368
Acc16I	TGCGCA	1 cut(s)	327
Acc36I	ACCTGC	2 cut(s)	523, 850
AccI	GTMKAC	1 cut(s)	249
AccII	CGCG	7 cut(s)	159, 179, 318, 449, 465, 1160, 1594
AclWI	GGATC	2 cut(s)	1196, 1592
AcoI	YGGCCR	2 cut(s)	99, 319
AcuI	CTGAAG	3 cut(s)	712, 1425, 1474
AcvI	CACGTG	1 cut(s)	1448
AcyI	GRCGYC	2 cut(s)	252, 1365
AfaI	GTAC	7 cut(s)	170, 446, 560, 663, 1098, 1130, 1416
AfiI	CCNNNNNNNGG	2 cut(s)	1511, 1514
AflIII	ACRYGT	2 cut(s)	213, 447
AhdI	GACNNNNNGTC	1 cut(s)	1146
AjiI	CACGTC	1 cut(s)	214
AjnI	CCWGG	1 cut(s)	126
Alw21I	GWGCWC	3 cut(s)	36, 280, 1504
Alw26I	GTCTC	5 cut(s)	9, 983, 1133, 1154, 1457
Alw44I	GTGCAC	1 cut(s)	1500
AlwI	GGATC	2 cut(s)	1196, 1592
AoxI	GGCC	5 cut(s)	63, 99, 319, 1243, 1310
ApaLI	GTGCAC	1 cut(s)	1500
ApeKI	GCWGC	6 cut(s)	83, 140, 197, 575, 605, 865
ArsI	GACNNNNNNTTYG	2 cut(s)	694, 726
Asp700I	GAANNNNTTC	2 cut(s)	383, 1167
AspLEI	GCGC	5 cut(s)	161, 181, 328, 524, 1615
AspS9I	GGNCC	3 cut(s)	187, 298, 1243
AsuC2I	CCSGG	2 cut(s)	346, 689
AsuHPI	GGTGA	5 cut(s)	451, 852, 1144, 1280, 1391
AsuNHI	GCTAGC	1 cut(s)	1609
AvaII	GGWCC	2 cut(s)	187, 298
BaeGI	GKGCMC	2 cut(s)	1402, 1504
BanII	GRGCYC	2 cut(s)	36, 280
BauI	CACGAG	1 cut(s)	41
BbrPI	CACGTG	1 cut(s)	1448
BbsI	GAAGAC	1 cut(s)	1360
Bbv12I	GWGCWC	3 cut(s)	36, 280, 1504
BbvI	GCAGC	6 cut(s)	95, 152, 209, 562, 592, 877
BccI	CCATC	5 cut(s)	238, 430, 626, 893, 985
BceAI	ACGGC	2 cut(s)	168, 306
BciT130I	CCWGG	1 cut(s)	128
BciVI	GTATCC	3 cut(s)	306, 1119, 1418
BclI	TGATCA	1 cut(s)	163
BcnI	CCSGG	2 cut(s)	346, 689
BcoDI	GTCTC	5 cut(s)	9, 983, 1133, 1154, 1457
BfaI	CTAG	1 cut(s)	1610
BfoI	RGCGCY	2 cut(s)	525, 1616
BfuAI	ACCTGC	2 cut(s)	523, 850
BfuI	GTATCC	3 cut(s)	306, 1119, 1418
BlpI	GCTNAGC	1 cut(s)	35
BmcAI	AGTACT	3 cut(s)	170, 663, 1130
Bme1390I	CCNGG	3 cut(s)	128, 346, 689
Bme18I	GGWCC	2 cut(s)	187, 298
BmeRI	GACNNNNNGTC	1 cut(s)	1146
BmgBI	CACGTC	1 cut(s)	214
BmgT120I	GGNCC	3 cut(s)	187, 298, 1243
BmrFI	CCNGG	3 cut(s)	128, 346, 689
BmrI	ACTGGG	1 cut(s)	850
BmsI	GCATC	3 cut(s)	967, 1174, 1536
BmtI	GCTAGC	1 cut(s)	1613
BmuI	ACTGGG	1 cut(s)	850
BoxI	GACNNNNGTC	2 cut(s)	269, 900
BpiI	GAAGAC	1 cut(s)	1360
BplI	GAGNNNNNCTC	2 cut(s)	50, 82
BpmI	CTGGAG	2 cut(s)	215, 1553
Bpu1102I	GCTNAGC	1 cut(s)	35
BpuEI	CTTGAG	1 cut(s)	128
BpuMI	CCSGG	2 cut(s)	346, 689
BsaAI	YACGTR	2 cut(s)	829, 1448
BsaBI	GATNNNNATC	1 cut(s)	884
BsaHI	GRCGYC	2 cut(s)	252, 1365
BsaI	GGTCTC	1 cut(s)	983
BsaJI	CCNNGG	4 cut(s)	150, 345, 688, 1510
BsaXI	ACNNNNNCTCC	4 cut(s)	852, 882, 986, 1016
Bsc4I	CCNNNNNNNGG	2 cut(s)	1511, 1514
Bse118I	RCCGGY	2 cut(s)	1187, 1605
Bse1I	ACTGG	4 cut(s)	232, 825, 856, 979
Bse8I	GATNNNNATC	1 cut(s)	884
BseBI	CCWGG	1 cut(s)	128
BseDI	CCNNGG	4 cut(s)	150, 345, 688, 1510
BseGI	GGATG	5 cut(s)	7, 544, 637, 1189, 1569
BseJI	GATNNNNATC	1 cut(s)	884
BseLI	CCNNNNNNNGG	2 cut(s)	1511, 1514
BseMII	CTCAG	6 cut(s)	32, 49, 276, 927, 1128, 1263
BseNI	ACTGG	4 cut(s)	232, 825, 856, 979
BseRI	GAGGAG	2 cut(s)	71, 1397
BseSI	GKGCMC	2 cut(s)	1402, 1504
BseX3I	CGGCCG	1 cut(s)	319
BseXI	GCAGC	6 cut(s)	95, 152, 209, 562, 592, 877
Bsh1236I	CGCG	7 cut(s)	159, 179, 318, 449, 465, 1160, 1594
Bsh1285I	CGRYCG	2 cut(s)	147, 322
BshFI	GGCC	5 cut(s)	65, 101, 321, 1245, 1312
BsiEI	CGRYCG	2 cut(s)	147, 322
BsiHKAI	GWGCWC	3 cut(s)	36, 280, 1504
BsiSI	CCGG	6 cut(s)	182, 345, 416, 688, 1188, 1606
BslFI	GGGAC	1 cut(s)	1226
BslI	CCNNNNNNNGG	2 cut(s)	1511, 1514
BsmAI	GTCTC	5 cut(s)	9, 983, 1133, 1154, 1457
BsmBI	CGTCTC	1 cut(s)	1154
BsmFI	GGGAC	1 cut(s)	1226
BsmI	GAATGC	1 cut(s)	607
BsnI	GGCC	5 cut(s)	65, 101, 321, 1245, 1312
Bso31I	GGTCTC	1 cut(s)	983
Bsp1286I	GDGCHC	4 cut(s)	36, 280, 1402, 1504
Bsp143I	GATC	6 cut(s)	163, 780, 1201, 1386, 1428, 1597
Bsp1720I	GCTNAGC	1 cut(s)	35
Bsp19I	CCATGG	1 cut(s)	1510
BspANI	GGCC	5 cut(s)	65, 101, 321, 1245, 1312
BspCNI	CTCAG	6 cut(s)	31, 48, 277, 928, 1129, 1264
BspFNI	CGCG	7 cut(s)	159, 179, 318, 449, 465, 1160, 1594
BspMI	ACCTGC	2 cut(s)	523, 850
BspOI	GCTAGC	1 cut(s)	1613
BspPI	GGATC	2 cut(s)	1196, 1592
BspQI	GCTCTTC	1 cut(s)	1556
BspTNI	GGTCTC	1 cut(s)	983
BsrFI	RCCGGY	2 cut(s)	1187, 1605
BsrI	ACTGG	4 cut(s)	232, 825, 856, 979
BssAI	RCCGGY	2 cut(s)	1187, 1605
BssECI	CCNNGG	4 cut(s)	150, 345, 688, 1510
BssMI	GATC	6 cut(s)	163, 780, 1201, 1386, 1428, 1597
BssNI	GRCGYC	2 cut(s)	252, 1365
BssSI	CACGAG	1 cut(s)	41
BssT1I	CCWWGG	1 cut(s)	1510
Bst2BI	CACGAG	1 cut(s)	41
Bst2UI	CCWGG	1 cut(s)	128
Bst4CI	ACNGT	3 cut(s)	391, 409, 563
Bst6I	CTCTTC	1 cut(s)	1556
BstACI	GRCGYC	2 cut(s)	252, 1365
BstAPI	GCANNNNNTGC	1 cut(s)	739
BstBAI	YACGTR	2 cut(s)	829, 1448
BstC8I	GCNNGC	6 cut(s)	24, 157, 357, 520, 847, 1611
BstDEI	CTNAG	8 cut(s)	18, 35, 71, 285, 936, 1137, 1216, 1272
BstDSI	CCRYGG	2 cut(s)	150, 1510
BstF5I	GGATG	5 cut(s)	7, 544, 637, 1189, 1569
BstFNI	CGCG	7 cut(s)	159, 179, 318, 449, 465, 1160, 1594
BstH2I	RGCGCY	2 cut(s)	525, 1616
BstHHI	GCGC	5 cut(s)	161, 181, 328, 524, 1615
BstKTI	GATC	6 cut(s)	166, 783, 1204, 1389, 1431, 1600
BstMAI	GTCTC	5 cut(s)	9, 983, 1133, 1154, 1457
BstMBI	GATC	6 cut(s)	163, 780, 1201, 1386, 1428, 1597
BstMCI	CGRYCG	2 cut(s)	147, 322
BstMWI	GCNNNNNNNGC	5 cut(s)	112, 146, 739, 851, 874
BstNI	CCWGG	1 cut(s)	128
BstPAI	GACNNNNGTC	2 cut(s)	269, 900
BstSCI	CCNGG	3 cut(s)	126, 344, 687
BstSLI	GKGCMC	2 cut(s)	1402, 1504
BstUI	CGCG	7 cut(s)	159, 179, 318, 449, 465, 1160, 1594
BstV1I	GCAGC	6 cut(s)	95, 152, 209, 562, 592, 877
BstV2I	GAAGAC	1 cut(s)	1360
BstZI	CGGCCG	1 cut(s)	319
BsuI	GTATCC	3 cut(s)	306, 1119, 1418
BsuRI	GGCC	5 cut(s)	65, 101, 321, 1245, 1312
BtgI	CCRYGG	2 cut(s)	150, 1510
BtrI	CACGTC	1 cut(s)	214
BtsCI	GGATG	5 cut(s)	7, 544, 637, 1189, 1569
BtsIMutI	CAGTG	3 cut(s)	401, 972, 1269
BveI	ACCTGC	2 cut(s)	523, 850
Cac8I	GCNNGC	6 cut(s)	24, 157, 357, 520, 847, 1611
CfoI	GCGC	5 cut(s)	161, 181, 328, 524, 1615
Cfr10I	RCCGGY	2 cut(s)	1187, 1605
Cfr13I	GGNCC	3 cut(s)	187, 298, 1243
CseI	GACGC	2 cut(s)	388, 438
Csp6I	GTAC	7 cut(s)	169, 445, 559, 662, 1097, 1129, 1415
CviAII	CATG	3 cut(s)	1324, 1412, 1511
CviQI	GTAC	7 cut(s)	169, 445, 559, 662, 1097, 1129, 1415
DdeI	CTNAG	8 cut(s)	18, 35, 71, 285, 936, 1137, 1216, 1272
DpnI	GATC	6 cut(s)	165, 782, 1203, 1388, 1430, 1599
DpnII	GATC	6 cut(s)	163, 780, 1201, 1386, 1428, 1597
DraI	TTTAAA	1 cut(s)	817
DriI	GACNNNNNGTC	1 cut(s)	1146
EaeI	YGGCCR	2 cut(s)	99, 319
EagI	CGGCCG	1 cut(s)	319
Eam1104I	CTCTTC	1 cut(s)	1556
Eam1105I	GACNNNNNGTC	1 cut(s)	1146
EarI	CTCTTC	1 cut(s)	1556
EciI	GGCGGA	1 cut(s)	163
Ecl136II	GAGCTC	2 cut(s)	34, 278
EclXI	CGGCCG	1 cut(s)	319
Eco130I	CCWWGG	1 cut(s)	1510
Eco147I	AGGCCT	1 cut(s)	1312
Eco24I	GRGCYC	2 cut(s)	36, 280
Eco31I	GGTCTC	1 cut(s)	983
Eco47I	GGWCC	2 cut(s)	187, 298
Eco52I	CGGCCG	1 cut(s)	319
Eco53kI	GAGCTC	2 cut(s)	34, 278
Eco57I	CTGAAG	3 cut(s)	712, 1425, 1474
Eco72I	CACGTG	1 cut(s)	1448
EcoICRI	GAGCTC	2 cut(s)	34, 278
EcoRII	CCWGG	1 cut(s)	126
EcoT14I	CCWWGG	1 cut(s)	1510
EcoT38I	GRGCYC	2 cut(s)	36, 280
ErhI	CCWWGG	1 cut(s)	1510
Esp3I	CGTCTC	1 cut(s)	1154
FaeI	CATG	3 cut(s)	1327, 1415, 1514
FaqI	GGGAC	1 cut(s)	1226
FatI	CATG	3 cut(s)	1323, 1411, 1510
FauI	CCCGC	1 cut(s)	1599
FbaI	TGATCA	1 cut(s)	163
FblI	GTMKAC	1 cut(s)	249
FokI	GGATG	4 cut(s)	551, 644, 1196, 1556
FriOI	GRGCYC	2 cut(s)	36, 280
FspBI	CTAG	1 cut(s)	1610
FspI	TGCGCA	1 cut(s)	327
GlaI	GCGC	5 cut(s)	160, 180, 327, 523, 1614
GsuI	CTGGAG	2 cut(s)	215, 1553
HaeII	RGCGCY	2 cut(s)	525, 1616
HaeIII	GGCC	5 cut(s)	65, 101, 321, 1245, 1312
HapII	CCGG	6 cut(s)	182, 345, 416, 688, 1188, 1606
HgaI	GACGC	2 cut(s)	388, 438
HhaI	GCGC	5 cut(s)	161, 181, 328, 524, 1615
Hin1I	GRCGYC	2 cut(s)	252, 1365
Hin1II	CATG	3 cut(s)	1327, 1415, 1514
Hin6I	GCGC	5 cut(s)	159, 179, 326, 522, 1613
HinP1I	GCGC	5 cut(s)	159, 179, 326, 522, 1613
HincII	GTYRAC	2 cut(s)	250, 1033
HindII	GTYRAC	2 cut(s)	250, 1033
HindIII	AAGCTT	1 cut(s)	104
HinfI	GANTC	7 cut(s)	14, 59, 467, 702, 709, 1141, 1484
HpaI	GTTAAC	1 cut(s)	1033
HpaII	CCGG	6 cut(s)	182, 345, 416, 688, 1188, 1606
HphI	GGTGA	5 cut(s)	451, 852, 1144, 1280, 1391
Hpy166II	GTNNAC	5 cut(s)	250, 387, 972, 1033, 1502
Hpy188III	TCNNGA	6 cut(s)	11, 403, 706, 980, 1343, 1601
Hpy8I	GTNNAC	5 cut(s)	250, 387, 972, 1033, 1502
Hpy99I	CGWCG	7 cut(s)	123, 215, 254, 404, 454, 1118, 1337
HpyCH4III	ACNGT	3 cut(s)	391, 409, 563
HpyCH4IV	ACGT	8 cut(s)	213, 252, 828, 1147, 1365, 1405, 1435, 1447
HpyCH4V	TGCA	3 cut(s)	518, 544, 1502
HpyF10VI	GCNNNNNNNGC	5 cut(s)	112, 146, 739, 851, 874
HpyF3I	CTNAG	8 cut(s)	18, 35, 71, 285, 936, 1137, 1216, 1272
HpySE526I	ACGT	8 cut(s)	213, 252, 828, 1147, 1365, 1405, 1435, 1447
Hsp92I	GRCGYC	2 cut(s)	252, 1365
Hsp92II	CATG	3 cut(s)	1327, 1415, 1514
HspAI	GCGC	5 cut(s)	159, 179, 326, 522, 1613
Ksp22I	TGATCA	1 cut(s)	163
KspAI	GTTAAC	1 cut(s)	1033
Kzo9I	GATC	6 cut(s)	163, 780, 1201, 1386, 1428, 1597
LguI	GCTCTTC	1 cut(s)	1556
LmnI	GCTCC	7 cut(s)	120, 130, 234, 275, 873, 1005, 1534
Lsp1109I	GCAGC	6 cut(s)	95, 152, 209, 562, 592, 877
LweI	GCATC	3 cut(s)	967, 1174, 1536
MaeI	CTAG	1 cut(s)	1610
MaeII	ACGT	8 cut(s)	213, 252, 828, 1147, 1365, 1405, 1435, 1447
MaeIII	GTNAC	3 cut(s)	216, 403, 858
MalI	GATC	6 cut(s)	165, 782, 1203, 1388, 1430, 1599
MboI	GATC	6 cut(s)	163, 780, 1201, 1386, 1428, 1597
MboII	GAAGA	5 cut(s)	251, 253, 718, 1360, 1543
MfeI	CAATTG	1 cut(s)	513
MhlI	GDGCHC	4 cut(s)	36, 280, 1402, 1504
MluCI	AATT	6 cut(s)	513, 594, 1072, 1354, 1421, 1452
MluI	ACGCGT	1 cut(s)	447
MlyI	GAGTC	4 cut(s)	68, 476, 718, 1135
MmeI	TCCRAC	3 cut(s)	253, 697, 726
MroXI	GAANNNNTTC	2 cut(s)	383, 1167
MseI	TTAA	3 cut(s)	816, 1032, 1124
MslI	CAYNNNNRTG	1 cut(s)	963
MspA1I	CMGCKG	1 cut(s)	680
MspI	CCGG	6 cut(s)	182, 345, 416, 688, 1188, 1606
MspR9I	CCNGG	3 cut(s)	128, 346, 689
MssI	GTTTAAAC	1 cut(s)	817
MunI	CAATTG	1 cut(s)	513
Mva1269I	GAATGC	1 cut(s)	607
MvaI	CCWGG	1 cut(s)	128
MvnI	CGCG	7 cut(s)	159, 179, 318, 449, 465, 1160, 1594
MwoI	GCNNNNNNNGC	5 cut(s)	112, 146, 739, 851, 874
NciI	CCSGG	2 cut(s)	346, 689
NcoI	CCATGG	1 cut(s)	1510
NdeII	GATC	6 cut(s)	163, 780, 1201, 1386, 1428, 1597
NheI	GCTAGC	1 cut(s)	1609
NlaIII	CATG	3 cut(s)	1327, 1415, 1514
NmuCI	GTSAC	3 cut(s)	216, 403, 858
NsbI	TGCGCA	1 cut(s)	327
PaqCI	CACCTGC	1 cut(s)	523
PceI	AGGCCT	1 cut(s)	1312
PciSI	GCTCTTC	1 cut(s)	1556
PctI	GAATGC	1 cut(s)	607
PdmI	GAANNNNTTC	2 cut(s)	383, 1167
PfeI	GAWTC	3 cut(s)	14, 702, 1484
PleI	GAGTC	4 cut(s)	67, 475, 717, 1135
PmaCI	CACGTG	1 cut(s)	1448
PmeI	GTTTAAAC	1 cut(s)	817
PmlI	CACGTG	1 cut(s)	1448
PpsI	GAGTC	4 cut(s)	67, 475, 717, 1135
Ppu21I	YACGTR	2 cut(s)	829, 1448
PshAI	GACNNNNGTC	2 cut(s)	269, 900
Psp124BI	GAGCTC	2 cut(s)	36, 280
Psp6I	CCWGG	1 cut(s)	126
PspCI	CACGTG	1 cut(s)	1448
PspGI	CCWGG	1 cut(s)	126
PspPI	GGNCC	3 cut(s)	187, 298, 1243
RsaI	GTAC	7 cut(s)	170, 446, 560, 663, 1098, 1130, 1416
RsaNI	GTAC	7 cut(s)	169, 445, 559, 662, 1097, 1129, 1415
RseI	CAYNNNNRTG	1 cut(s)	963
SacI	GAGCTC	2 cut(s)	36, 280
SalI	GTCGAC	1 cut(s)	248
SapI	GCTCTTC	1 cut(s)	1556
SaqAI	TTAA	3 cut(s)	816, 1032, 1124
Sau3AI	GATC	6 cut(s)	163, 780, 1201, 1386, 1428, 1597
Sau96I	GGNCC	3 cut(s)	187, 298, 1243
ScaI	AGTACT	3 cut(s)	170, 663, 1130
SchI	GAGTC	4 cut(s)	68, 476, 718, 1135
ScrFI	CCNGG	3 cut(s)	128, 346, 689
SduI	GDGCHC	4 cut(s)	36, 280, 1402, 1504
SfaNI	GCATC	3 cut(s)	967, 1174, 1536
SinI	GGWCC	2 cut(s)	187, 298
SmiMI	CAYNNNNRTG	1 cut(s)	963
SmlI	CTYRAG	1 cut(s)	107
SmoI	CTYRAG	1 cut(s)	107
Sse9I	AATT	6 cut(s)	513, 594, 1072, 1354, 1421, 1452
SseBI	AGGCCT	1 cut(s)	1312
SspMI	CTAG	1 cut(s)	1610
SstI	GAGCTC	2 cut(s)	36, 280
StuI	AGGCCT	1 cut(s)	1312
StyD4I	CCNGG	3 cut(s)	126, 344, 687
StyI	CCWWGG	1 cut(s)	1510
TaaI	ACNGT	3 cut(s)	391, 409, 563
TaiI	ACGT	8 cut(s)	216, 255, 831, 1150, 1368, 1408, 1438, 1450
TasI	AATT	6 cut(s)	513, 594, 1072, 1354, 1421, 1452
TatI	WGTACW	4 cut(s)	168, 558, 661, 1128
TauI	GCSGC	6 cut(s)	101, 126, 179, 321, 465, 683
TfiI	GAWTC	3 cut(s)	14, 702, 1484
Tru1I	TTAA	3 cut(s)	816, 1032, 1124
Tru9I	TTAA	3 cut(s)	816, 1032, 1124
TscAI	CASTG	3 cut(s)	401, 979, 1276
TseFI	GTSAC	3 cut(s)	216, 403, 858
TseI	GCWGC	6 cut(s)	83, 140, 197, 575, 605, 865
Tsp45I	GTSAC	3 cut(s)	216, 403, 858
TspDTI	ATGAA	2 cut(s)	254, 1360
TspGWI	ACGGA	3 cut(s)	107, 281, 1287
TspRI	CASTG	3 cut(s)	401, 979, 1276
VneI	GTGCAC	1 cut(s)	1500
VpaK11BI	GGWCC	2 cut(s)	187, 298
XcmI	CCANNNNNNNNNTGG	2 cut(s)	713, 1517
XmiI	GTMKAC	1 cut(s)	249
XmnI	GAANNNNTTC	2 cut(s)	383, 1167
XspI	CTAG	1 cut(s)	1610
ZraI	GACGTC	2 cut(s)	253, 1366
ZrmI	AGTACT	3 cut(s)	170, 663, 1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.