aspartate--tRNA ligase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA-synt_2 | PF00152 | 219 - 373 | 1.3e-38 | tRNA synthetases class II (D, K and N) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 511 |
| AatII | GACGTC | 1 cut(s) | 243 |
| Acc36I | ACCTGC | 3 cut(s) | 511, 868, 1044 |
| AccBSI | CCGCTC | 1 cut(s) | 208 |
| AccII | CGCG | 7 cut(s) | 146, 153, 188, 306, 312, 314, 453 |
| AclWI | GGATC | 2 cut(s) | 239, 316 |
| AcoI | YGGCCR | 3 cut(s) | 138, 307, 900 |
| AcuI | CTGAAG | 2 cut(s) | 733, 789 |
| AcyI | GRCGYC | 1 cut(s) | 240 |
| AfaI | GTAC | 4 cut(s) | 434, 548, 684, 1116 |
| AfeI | AGCGCT | 1 cut(s) | 267 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 424 |
| AgsI | TTSAA | 8 cut(s) | 283, 473, 617, 673, 782, 813, 1084, 1109 |
| AjnI | CCWGG | 4 cut(s) | 33, 120, 490, 708 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 38, 70 |
| AluBI | AGCT | 9 cut(s) | 100, 109, 134, 217, 623, 886, 953, 1026, 1112 |
| AluI | AGCT | 9 cut(s) | 100, 109, 134, 217, 623, 886, 953, 1026, 1112 |
| Alw26I | GTCTC | 1 cut(s) | 1001 |
| AlwI | GGATC | 2 cut(s) | 239, 316 |
| Ama87I | CYCGRG | 1 cut(s) | 101 |
| Aor51HI | AGCGCT | 1 cut(s) | 267 |
| AoxI | GGCC | 4 cut(s) | 75, 138, 307, 900 |
| ApeKI | GCWGC | 4 cut(s) | 134, 400, 593, 883 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 715, 747 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 371 |
| AspLEI | GCGC | 5 cut(s) | 155, 268, 314, 316, 512 |
| AspS9I | GGNCC | 3 cut(s) | 175, 286, 938 |
| AsuHPI | GGTGA | 3 cut(s) | 783, 870, 923 |
| AsuII | TTCGAA | 1 cut(s) | 1134 |
| AvaI | CYCGRG | 1 cut(s) | 101 |
| AvaII | GGWCC | 3 cut(s) | 175, 286, 938 |
| BalI | TGGCCA | 1 cut(s) | 902 |
| BanII | GRGCYC | 1 cut(s) | 30 |
| BbvCI | CCTCAGC | 2 cut(s) | 12, 954 |
| BbvI | GCAGC | 4 cut(s) | 121, 412, 580, 895 |
| BccI | CCATC | 4 cut(s) | 418, 892, 911, 1003 |
| BceAI | ACGGC | 3 cut(s) | 211, 314, 402 |
| BciT130I | CCWGG | 4 cut(s) | 35, 122, 492, 710 |
| BciVI | GTATCC | 2 cut(s) | 655, 1137 |
| BcoDI | GTCTC | 1 cut(s) | 1001 |
| BfoI | RGCGCY | 2 cut(s) | 269, 513 |
| BfuAI | ACCTGC | 3 cut(s) | 511, 868, 1044 |
| BfuI | GTATCC | 2 cut(s) | 655, 1137 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 146 |
| BmcAI | AGTACT | 1 cut(s) | 684 |
| Bme1390I | CCNGG | 4 cut(s) | 35, 122, 492, 710 |
| Bme18I | GGWCC | 3 cut(s) | 175, 286, 938 |
| BmeT110I | CYCGRG | 1 cut(s) | 101 |
| BmgT120I | GGNCC | 3 cut(s) | 175, 286, 938 |
| BmiI | GGNNCC | 2 cut(s) | 39, 177 |
| BmrFI | CCNGG | 4 cut(s) | 35, 122, 492, 710 |
| BmrI | ACTGGG | 1 cut(s) | 868 |
| BmsI | GCATC | 3 cut(s) | 580, 595, 985 |
| BmuI | ACTGGG | 1 cut(s) | 868 |
| BoxI | GACNNNNGTC | 2 cut(s) | 257, 918 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 44, 76 |
| BpmI | CTGGAG | 1 cut(s) | 654 |
| Bpu10I | CCTNAGC | 2 cut(s) | 12, 954 |
| Bpu14I | TTCGAA | 1 cut(s) | 1134 |
| Bsa29I | ATCGAT | 1 cut(s) | 224 |
| BsaAI | YACGTR | 1 cut(s) | 436 |
| BsaBI | GATNNNNATC | 2 cut(s) | 230, 902 |
| BsaHI | GRCGYC | 1 cut(s) | 240 |
| BsaI | GGTCTC | 1 cut(s) | 1001 |
| BsaJI | CCNNGG | 4 cut(s) | 33, 144, 393, 709 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 870, 900, 1004, 1034 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 424 |
| Bse118I | RCCGGY | 1 cut(s) | 700 |
| Bse1I | ACTGG | 5 cut(s) | 254, 648, 846, 874, 997 |
| Bse8I | GATNNNNATC | 2 cut(s) | 230, 902 |
| BseBI | CCWGG | 4 cut(s) | 35, 122, 492, 710 |
| BseCI | ATCGAT | 1 cut(s) | 224 |
| BseDI | CCNNGG | 4 cut(s) | 33, 144, 393, 709 |
| BseGI | GGATG | 1 cut(s) | 595 |
| BseJI | GATNNNNATC | 2 cut(s) | 230, 902 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 424 |
| BseMII | CTCAG | 4 cut(s) | 26, 79, 147, 945 |
| BseNI | ACTGG | 5 cut(s) | 254, 648, 846, 874, 997 |
| BsePI | GCGCGC | 1 cut(s) | 312 |
| BseRI | GAGGAG | 1 cut(s) | 65 |
| BseX3I | CGGCCG | 2 cut(s) | 138, 307 |
| BseXI | GCAGC | 4 cut(s) | 121, 412, 580, 895 |
| BsgI | GTGCAG | 1 cut(s) | 419 |
| Bsh1236I | CGCG | 7 cut(s) | 146, 153, 188, 306, 312, 314, 453 |
| Bsh1285I | CGRYCG | 2 cut(s) | 141, 310 |
| BshFI | GGCC | 4 cut(s) | 77, 140, 309, 902 |
| BshVI | ATCGAT | 1 cut(s) | 224 |
| BsiEI | CGRYCG | 2 cut(s) | 141, 310 |
| BsiHKCI | CYCGRG | 1 cut(s) | 101 |
| BsiSI | CCGG | 3 cut(s) | 170, 404, 701 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 424 |
| BsmAI | GTCTC | 1 cut(s) | 1001 |
| BsnI | GGCC | 4 cut(s) | 77, 140, 309, 902 |
| Bso31I | GGTCTC | 1 cut(s) | 1001 |
| BsoBI | CYCGRG | 1 cut(s) | 101 |
| Bsp119I | TTCGAA | 1 cut(s) | 1134 |
| Bsp1286I | GDGCHC | 1 cut(s) | 30 |
| Bsp143I | GATC | 3 cut(s) | 231, 321, 801 |
| BspANI | GGCC | 4 cut(s) | 77, 140, 309, 902 |
| BspCNI | CTCAG | 4 cut(s) | 25, 78, 148, 946 |
| BspDI | ATCGAT | 1 cut(s) | 224 |
| BspFNI | CGCG | 7 cut(s) | 146, 153, 188, 306, 312, 314, 453 |
| BspLI | GGNNCC | 2 cut(s) | 39, 177 |
| BspMI | ACCTGC | 3 cut(s) | 511, 868, 1044 |
| BspPI | GGATC | 2 cut(s) | 239, 316 |
| BspT104I | TTCGAA | 1 cut(s) | 1134 |
| BspTNI | GGTCTC | 1 cut(s) | 1001 |
| BsrBI | CCGCTC | 1 cut(s) | 208 |
| BsrFI | RCCGGY | 1 cut(s) | 700 |
| BsrI | ACTGG | 5 cut(s) | 254, 648, 846, 874, 997 |
| BssAI | RCCGGY | 1 cut(s) | 700 |
| BssECI | CCNNGG | 4 cut(s) | 33, 144, 393, 709 |
| BssHII | GCGCGC | 1 cut(s) | 312 |
| BssMI | GATC | 3 cut(s) | 231, 321, 801 |
| BssNI | GRCGYC | 1 cut(s) | 240 |
| Bst2UI | CCWGG | 4 cut(s) | 35, 122, 492, 710 |
| Bst4CI | ACNGT | 3 cut(s) | 379, 397, 551 |
| BstACI | GRCGYC | 1 cut(s) | 240 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 760 |
| BstBAI | YACGTR | 1 cut(s) | 436 |
| BstBI | TTCGAA | 1 cut(s) | 1134 |
| BstC8I | GCNNGC | 3 cut(s) | 151, 314, 865 |
| BstDEI | CTNAG | 4 cut(s) | 12, 65, 156, 954 |
| BstDSI | CCRYGG | 2 cut(s) | 144, 393 |
| BstF5I | GGATG | 1 cut(s) | 595 |
| BstFNI | CGCG | 7 cut(s) | 146, 153, 188, 306, 312, 314, 453 |
| BstH2I | RGCGCY | 2 cut(s) | 269, 513 |
| BstHHI | GCGC | 5 cut(s) | 155, 268, 314, 316, 512 |
| BstKTI | GATC | 3 cut(s) | 234, 324, 804 |
| BstMAI | GTCTC | 1 cut(s) | 1001 |
| BstMBI | GATC | 3 cut(s) | 231, 321, 801 |
| BstMCI | CGRYCG | 2 cut(s) | 141, 310 |
| BstNI | CCWGG | 4 cut(s) | 35, 122, 492, 710 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 257, 918 |
| BstSCI | CCNGG | 4 cut(s) | 33, 120, 490, 708 |
| BstUI | CGCG | 7 cut(s) | 146, 153, 188, 306, 312, 314, 453 |
| BstV1I | GCAGC | 4 cut(s) | 121, 412, 580, 895 |
| BstZI | CGGCCG | 2 cut(s) | 138, 307 |
| Bsu15I | ATCGAT | 1 cut(s) | 224 |
| BsuI | GTATCC | 2 cut(s) | 655, 1137 |
| BsuRI | GGCC | 4 cut(s) | 77, 140, 309, 902 |
| BsuTUI | ATCGAT | 1 cut(s) | 224 |
| BtgI | CCRYGG | 2 cut(s) | 144, 393 |
| BtsCI | GGATG | 1 cut(s) | 595 |
| BtsIMutI | CAGTG | 2 cut(s) | 389, 990 |
| BveI | ACCTGC | 3 cut(s) | 511, 868, 1044 |
| Cac8I | GCNNGC | 3 cut(s) | 151, 314, 865 |
| CciNI | GCGGCCGC | 2 cut(s) | 138, 307 |
| CfoI | GCGC | 5 cut(s) | 155, 268, 314, 316, 512 |
| Cfr10I | RCCGGY | 1 cut(s) | 700 |
| Cfr13I | GGNCC | 3 cut(s) | 175, 286, 938 |
| Cfr42I | CCGCGG | 1 cut(s) | 147 |
| ClaI | ATCGAT | 1 cut(s) | 224 |
| CseI | GACGC | 1 cut(s) | 376 |
| Csp6I | GTAC | 4 cut(s) | 433, 547, 683, 1115 |
| CviAII | CATG | 1 cut(s) | 343 |
| CviQI | GTAC | 4 cut(s) | 433, 547, 683, 1115 |
| DdeI | CTNAG | 4 cut(s) | 12, 65, 156, 954 |
| DpnI | GATC | 3 cut(s) | 233, 323, 803 |
| DpnII | GATC | 3 cut(s) | 231, 321, 801 |
| DraI | TTTAAA | 1 cut(s) | 838 |
| EaeI | YGGCCR | 3 cut(s) | 138, 307, 900 |
| EagI | CGGCCG | 2 cut(s) | 138, 307 |
| EciI | GGCGGA | 2 cut(s) | 46, 151 |
| EclXI | CGGCCG | 2 cut(s) | 138, 307 |
| Eco24I | GRGCYC | 1 cut(s) | 30 |
| Eco31I | GGTCTC | 1 cut(s) | 1001 |
| Eco47I | GGWCC | 3 cut(s) | 175, 286, 938 |
| Eco47III | AGCGCT | 1 cut(s) | 267 |
| Eco52I | CGGCCG | 2 cut(s) | 138, 307 |
| Eco57I | CTGAAG | 2 cut(s) | 733, 789 |
| Eco88I | CYCGRG | 1 cut(s) | 101 |
| EcoO109I | RGGNCCY | 1 cut(s) | 175 |
| EcoRII | CCWGG | 4 cut(s) | 33, 120, 490, 708 |
| EcoT38I | GRGCYC | 1 cut(s) | 30 |
| FaeI | CATG | 1 cut(s) | 346 |
| FaiI | YATR | 8 cut(s) | 344, 554, 966, 972, 982, 1040, 1070, 1151 |
| FatI | CATG | 1 cut(s) | 342 |
| FokI | GGATG | 1 cut(s) | 602 |
| FriOI | GRGCYC | 1 cut(s) | 30 |
| GlaI | GCGC | 5 cut(s) | 154, 267, 313, 315, 511 |
| GsuI | CTGGAG | 1 cut(s) | 654 |
| HaeII | RGCGCY | 2 cut(s) | 269, 513 |
| HaeIII | GGCC | 4 cut(s) | 77, 140, 309, 902 |
| HapII | CCGG | 3 cut(s) | 170, 404, 701 |
| HgaI | GACGC | 1 cut(s) | 376 |
| HhaI | GCGC | 5 cut(s) | 155, 268, 314, 316, 512 |
| Hin1I | GRCGYC | 1 cut(s) | 240 |
| Hin1II | CATG | 1 cut(s) | 346 |
| Hin6I | GCGC | 5 cut(s) | 153, 266, 312, 314, 510 |
| HinP1I | GCGC | 5 cut(s) | 153, 266, 312, 314, 510 |
| HincII | GTYRAC | 1 cut(s) | 244 |
| HindII | GTYRAC | 1 cut(s) | 244 |
| HinfI | GANTC | 7 cut(s) | 53, 158, 455, 723, 730, 959, 1153 |
| HpaII | CCGG | 3 cut(s) | 170, 404, 701 |
| HphI | GGTGA | 3 cut(s) | 783, 870, 923 |
| Hpy166II | GTNNAC | 2 cut(s) | 244, 990 |
| Hpy188III | TCNNGA | 5 cut(s) | 103, 334, 659, 727, 998 |
| Hpy8I | GTNNAC | 2 cut(s) | 244, 990 |
| Hpy99I | CGWCG | 4 cut(s) | 117, 242, 335, 392 |
| HpyAV | CCTTC | 8 cut(s) | 277, 286, 361, 467, 764, 812, 1093, 1141 |
| HpyCH4III | ACNGT | 3 cut(s) | 379, 397, 551 |
| HpyCH4IV | ACGT | 2 cut(s) | 240, 435 |
| HpyCH4V | TGCA | 2 cut(s) | 400, 532 |
| HpyF3I | CTNAG | 4 cut(s) | 12, 65, 156, 954 |
| HpySE526I | ACGT | 2 cut(s) | 240, 435 |
| Hsp92I | GRCGYC | 1 cut(s) | 240 |
| Hsp92II | CATG | 1 cut(s) | 346 |
| HspAI | GCGC | 5 cut(s) | 153, 266, 312, 314, 510 |
| KspI | CCGCGG | 1 cut(s) | 147 |
| Kzo9I | GATC | 3 cut(s) | 231, 321, 801 |
| LmnI | GCTCC | 7 cut(s) | 37, 114, 124, 222, 263, 891, 1023 |
| Lsp1109I | GCAGC | 4 cut(s) | 121, 412, 580, 895 |
| LweI | GCATC | 3 cut(s) | 580, 595, 985 |
| MaeII | ACGT | 2 cut(s) | 240, 435 |
| MaeIII | GTNAC | 3 cut(s) | 876, 911, 1063 |
| MalI | GATC | 3 cut(s) | 233, 323, 803 |
| MbiI | CCGCTC | 1 cut(s) | 208 |
| MboI | GATC | 3 cut(s) | 231, 321, 801 |
| MboII | GAAGA | 2 cut(s) | 349, 739 |
| MhlI | GDGCHC | 1 cut(s) | 30 |
| MlsI | TGGCCA | 1 cut(s) | 902 |
| MluCI | AATT | 3 cut(s) | 501, 612, 1090 |
| MluNI | TGGCCA | 1 cut(s) | 902 |
| MlyI | GAGTC | 5 cut(s) | 62, 167, 464, 739, 953 |
| MmeI | TCCRAC | 2 cut(s) | 241, 718 |
| Mox20I | TGGCCA | 1 cut(s) | 902 |
| MroXI | GAANNNNTTC | 1 cut(s) | 371 |
| MscI | TGGCCA | 1 cut(s) | 902 |
| MseI | TTAA | 5 cut(s) | 446, 504, 837, 1017, 1165 |
| MslI | CAYNNNNRTG | 1 cut(s) | 981 |
| Msp20I | TGGCCA | 1 cut(s) | 902 |
| MspA1I | CMGCKG | 1 cut(s) | 146 |
| MspI | CCGG | 3 cut(s) | 170, 404, 701 |
| MspR9I | CCNGG | 4 cut(s) | 35, 122, 492, 710 |
| MssI | GTTTAAAC | 1 cut(s) | 838 |
| MvaI | CCWGG | 4 cut(s) | 35, 122, 492, 710 |
| MvnI | CGCG | 7 cut(s) | 146, 153, 188, 306, 312, 314, 453 |
| NdeII | GATC | 3 cut(s) | 231, 321, 801 |
| NlaIII | CATG | 1 cut(s) | 346 |
| NlaIV | GGNNCC | 2 cut(s) | 39, 177 |
| NmeAIII | GCCGAG | 1 cut(s) | 190 |
| NmuCI | GTSAC | 2 cut(s) | 876, 911 |
| NotI | GCGGCCGC | 2 cut(s) | 138, 307 |
| NspV | TTCGAA | 1 cut(s) | 1134 |
| PaeR7I | CTCGAG | 1 cut(s) | 101 |
| PaqCI | CACCTGC | 1 cut(s) | 511 |
| PauI | GCGCGC | 1 cut(s) | 312 |
| PdmI | GAANNNNTTC | 1 cut(s) | 371 |
| PfeI | GAWTC | 2 cut(s) | 723, 1153 |
| PleI | GAGTC | 5 cut(s) | 61, 166, 463, 738, 953 |
| PmeI | GTTTAAAC | 1 cut(s) | 838 |
| PpsI | GAGTC | 5 cut(s) | 61, 166, 463, 738, 953 |
| Ppu21I | YACGTR | 1 cut(s) | 436 |
| PpuMI | RGGWCCY | 1 cut(s) | 175 |
| PshAI | GACNNNNGTC | 2 cut(s) | 257, 918 |
| Psp5II | RGGWCCY | 1 cut(s) | 175 |
| Psp6I | CCWGG | 4 cut(s) | 33, 120, 490, 708 |
| PspGI | CCWGG | 4 cut(s) | 33, 120, 490, 708 |
| PspN4I | GGNNCC | 2 cut(s) | 39, 177 |
| PspPI | GGNCC | 3 cut(s) | 175, 286, 938 |
| PspPPI | RGGWCCY | 1 cut(s) | 175 |
| PteI | GCGCGC | 1 cut(s) | 312 |
| RsaI | GTAC | 4 cut(s) | 434, 548, 684, 1116 |
| RsaNI | GTAC | 4 cut(s) | 433, 547, 683, 1115 |
| RseI | CAYNNNNRTG | 1 cut(s) | 981 |
| SacII | CCGCGG | 1 cut(s) | 147 |
| SaqAI | TTAA | 5 cut(s) | 446, 504, 837, 1017, 1165 |
| Sau3AI | GATC | 3 cut(s) | 231, 321, 801 |
| Sau96I | GGNCC | 3 cut(s) | 175, 286, 938 |
| ScaI | AGTACT | 1 cut(s) | 684 |
| SchI | GAGTC | 5 cut(s) | 62, 167, 464, 739, 953 |
| ScrFI | CCNGG | 4 cut(s) | 35, 122, 492, 710 |
| SduI | GDGCHC | 1 cut(s) | 30 |
| SfaNI | GCATC | 3 cut(s) | 580, 595, 985 |
| Sfr274I | CTCGAG | 1 cut(s) | 101 |
| Sfr303I | CCGCGG | 1 cut(s) | 147 |
| SfuI | TTCGAA | 1 cut(s) | 1134 |
| SgrBI | CCGCGG | 1 cut(s) | 147 |
| SinI | GGWCC | 3 cut(s) | 175, 286, 938 |
| SlaI | CTCGAG | 1 cut(s) | 101 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 981 |
| SmlI | CTYRAG | 1 cut(s) | 101 |
| SmoI | CTYRAG | 1 cut(s) | 101 |
| Sse9I | AATT | 3 cut(s) | 501, 612, 1090 |
| StyD4I | CCNGG | 4 cut(s) | 33, 120, 490, 708 |
| TaaI | ACNGT | 3 cut(s) | 379, 397, 551 |
| TaiI | ACGT | 2 cut(s) | 243, 438 |
| TaqI | TCGA | 5 cut(s) | 102, 224, 598, 999, 1134 |
| TasI | AATT | 3 cut(s) | 501, 612, 1090 |
| TatI | WGTACW | 2 cut(s) | 546, 682 |
| TfiI | GAWTC | 2 cut(s) | 723, 1153 |
| Tru1I | TTAA | 5 cut(s) | 446, 504, 837, 1017, 1165 |
| Tru9I | TTAA | 5 cut(s) | 446, 504, 837, 1017, 1165 |
| TscAI | CASTG | 2 cut(s) | 389, 997 |
| TseFI | GTSAC | 2 cut(s) | 876, 911 |
| TseI | GCWGC | 4 cut(s) | 134, 400, 593, 883 |
| Tsp45I | GTSAC | 2 cut(s) | 876, 911 |
| TspGWI | ACGGA | 5 cut(s) | 101, 269, 287, 820, 1132 |
| TspRI | CASTG | 2 cut(s) | 389, 997 |
| VpaK11BI | GGWCC | 3 cut(s) | 175, 286, 938 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 734 |
| XhoI | CTCGAG | 1 cut(s) | 101 |
| XmnI | GAANNNNTTC | 1 cut(s) | 371 |
| ZraI | GACGTC | 1 cut(s) | 241 |
| ZrmI | AGTACT | 1 cut(s) | 684 |