Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0001714

Physical Location & Seq

Genomic Coordinates Forward (+)

41167442 .. 41169419

Gene Structure 1978 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG228300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGCGTGTAAGGTTTATATACAACACAAGTATTCTTCTTCTACAAGTCACAAACTTTTCTCACAAGTCACAAGTAAACTCTTCCTACATTCAAGAATGTCTCATCCAGAATCTCAGCCAGCCACCGAGCTCAGCCACGAGCCAGAGAACGAGGAGTCAGCCTCTCTTAGCAAAAAAGCAGCAAAGAAAAAAGCGGCCAAGCTCGAGAAGCTCCGTCGCCGCCAGGAGAGAGAAGCAGCGACCGCCGCGGCTCGAGCTGATCAGTACTCCGCCGCGCCGGAGGACCAACTCGCCGCGAACTATGGCGACGTGTCACTCATTCAGCTCCAGTCGATGAAGATGGTCGACGTCAATCTTCGGACGGAGGTCGGAGCTCTAACTGAGGCGTTGAAGGACCAGAAGGTTCGGATACGCTGCCGTGCGCAGACGATTAGGCCCACCGGGGAGAAGCTGGCGTTTATTGTGGTCAGAGAGAAGGGGTTCACGGTTCAGTGCGTCGTGACGGTTCAGCCGGAGATAGTGAGCTGTCAGATGGTGAAGTATGCGTCGAAGTTGAGCCGCGAGTCGATTATTGACATTGAAGGGATTGTGTCTAAACCTGATATGGCAATTGCAGGCGCTTCACAGCAGGTGGATGTGCAAGTTAGAAAGTTGTACTGTATAAGTAGGGCTGCTGTTTTACCTATTGAAATTGAGAATGCTGCTCGAAGTGAAAAACCTAATGAGGATGGACAGAATACTCGCTTGAATAACCGAGTACTTGACTTGCGAACAGCGGCCAACCGGGGGATTTTCCGAATCCAGAGTCAAGTTGGAACTATCTTCAGGCAGTTTTTGCTGTCCGAAGGGTTTGTTGAAATCCATACACCAAAACTGATCGCTGGTTCAAGTGAAGGTGGGGCTTCGGTGTTTAAACTGGACTACGTGAAGGGGCAACCTGCCTGCCTTGCCCAGTCACCGCAGCTCCACAAGCAGATGTCCATCTGTGCTGATTTTGGTCGTGTTTTCGAGGTTGGTTCTGTTTTCAGAGCTGAGAACTCTGATACACATAGGCATCTATGTGAGTTCACTGGTCTCGATATTGAGATGGAGATTGAGTGGAGCTATTTTGAGGTTATGGATATTGTTAACAGGTTGTTTGTCAATATGTTTGACTATTTGAACAAAAATTGTGAGAAGGAACTTGAAGCTGTACGAGGGCAGTATCCCTTCGAACCATTAAAGTACTTGCCTGAGACTCTACGTCTCACCTTCGCGGAAGGTGTTCAAATGCTAAAGGATGCCGGTGTGGAAGTTGATCCTATGGGGGACTTAGATACTAAAAAAGAGAGGAAGTTGGGCCAAATAGTTTTGGAGAAATATGGCACTGAGTTCTACATACTTCACCGCTATCCATTGGCTGTGAGGCCTTTCTATACCATGCCTTGCGACGATAATCCTGAATATAGTAATTCGTTTGACGTCTTCATTCGAGGTGAGGAGATTATATCAGGTGCACAACGTATCCATGTACCAGAATTATTGGTCGAACGTGCTTCAGCACGTGGAATTGAAGTAGAGACAATATCAACATATATTGATTCCTTCAGATATGGTGCACCTCCCCATGGTGGATTTGGAGTAGGGCTGGAACGTGTTGTGATGCTCTTCTGTGGTTTGAATAACATCCGCAAAACATCTTTATTCCCGCGTGATCCAGACCGTCTAGCGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004815 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006422 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0016070 GO:0016874 GO:0016875 GO:0017101 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045202 GO:0046483 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0090304 GO:0098542 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2 tRNA_anti-codon

Protein Analysis

571

Amino Acids

64.29

Weight (kDa)

6.88

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2	PF00152	245 - 565	8.7e-79	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26870 AT4G31180 AT4G31180
fragaria_vesca	FvH4_2g15870 FvH4_2g15910 FvH4_2g30550
malus_domestica	MD08G1134400.v1.1 MD12G1153800.v1.1 MD14G1143300.v1.1 MD15G1113400.v1.1
prunus_persica	Prupe.1G463800_v2.0.a1 Prupe.4G141600_v2.0.a1 Prupe.8G055000_v2.0.a1
pyrus_communis	pycom08g11340 pycom15g10170 pycom16g11710
rosa_chinensis	RchiOBHm_Chr5g0032141 RchiOBHm_Chr5g0032161 RchiOBHm_Chr6g0278871 RchiOBHm_Chr6g0312531
rosa_laevigata	RLG00000010321 RLG00000033368
rosa_multiflora	Rmu_co8427103.1_g000001 Rmu_sc0003031.1_g000023 Rmu_sc0005375.1_g000002 Rmu_sc0005375.1_g000011 Rmu_sc0008363.1_g000011 Rmu_sc0043080.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048240 Rroxscaffold_1G00048270 Rroxscaffold_7G00156770
rosa_rugosa	Rorug06G0119800 Rorug06G0120000 Rorug06G0123400 Rorug06G0396100 Rorug06G0396200
rosa_samantha	Rh5DG228900 Rh6AG228300 Rh6AG513500 Rh6BG233900 Rh6BG234000 Rh6BG524200 Rh6BG526500 Rh6CG236300 Rh6CG531400 Rh6DG515600
rosa_wichuraiana	Rw6G020030 Rw6G044650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	619
AatII	GACGTC	2 cut(s)	351, 1464
Acc16I	TGCGCA	1 cut(s)	423
Acc36I	ACCTGC	2 cut(s)	619, 946
AccI	GTMKAC	1 cut(s)	345
AccII	CGCG	6 cut(s)	248, 275, 296, 561, 1256, 1690
AclWI	GGATC	2 cut(s)	1292, 1688
AcoI	YGGCCR	2 cut(s)	195, 777
AcuI	CTGAAG	3 cut(s)	808, 1521, 1570
AcvI	CACGTG	1 cut(s)	1544
AcyI	GRCGYC	2 cut(s)	348, 1461
AfaI	GTAC	6 cut(s)	266, 656, 759, 1194, 1226, 1512
AfiI	CCNNNNNNNGG	3 cut(s)	786, 1607, 1610
AflIII	ACRYGT	2 cut(s)	309, 1633
AhdI	GACNNNNNGTC	1 cut(s)	1242
AjiI	CACGTC	1 cut(s)	310
AjnI	CCWGG	1 cut(s)	222
Alw21I	GWGCWC	4 cut(s)	132, 376, 1498, 1600
Alw26I	GTCTC	5 cut(s)	105, 1079, 1229, 1250, 1553
Alw44I	GTGCAC	2 cut(s)	1494, 1596
AlwI	GGATC	2 cut(s)	1292, 1688
Ama87I	CYCGRG	2 cut(s)	203, 252
AoxI	GGCC	5 cut(s)	195, 434, 777, 1339, 1406
ApaLI	GTGCAC	2 cut(s)	1494, 1596
ApeKI	GCWGC	6 cut(s)	179, 236, 414, 671, 701, 961
ArsI	GACNNNNNNTTYG	2 cut(s)	790, 822
Asp700I	GAANNNNTTC	2 cut(s)	479, 1263
AspLEI	GCGC	4 cut(s)	277, 424, 620, 1711
AspS9I	GGNCC	4 cut(s)	283, 394, 435, 1339
AsuC2I	CCSGG	2 cut(s)	442, 785
AsuHPI	GGTGA	5 cut(s)	547, 948, 1240, 1376, 1487
AsuII	TTCGAA	1 cut(s)	1212
AvaI	CYCGRG	2 cut(s)	203, 252
AvaII	GGWCC	2 cut(s)	283, 394
BaeGI	GKGCMC	2 cut(s)	1498, 1600
BanII	GRGCYC	2 cut(s)	132, 376
BauI	CACGAG	1 cut(s)	137
BbrPI	CACGTG	1 cut(s)	1544
BbsI	GAAGAC	1 cut(s)	1456
Bbv12I	GWGCWC	4 cut(s)	132, 376, 1498, 1600
BbvI	GCAGC	6 cut(s)	191, 248, 401, 658, 688, 973
BccI	CCATC	5 cut(s)	334, 526, 722, 989, 1081
BceAI	ACGGC	1 cut(s)	402
BciT130I	CCWGG	1 cut(s)	224
BciVI	GTATCC	3 cut(s)	402, 1215, 1514
BclI	TGATCA	1 cut(s)	259
BcnI	CCSGG	2 cut(s)	442, 785
BcoDI	GTCTC	5 cut(s)	105, 1079, 1229, 1250, 1553
BfaI	CTAG	1 cut(s)	1706
BfoI	RGCGCY	2 cut(s)	621, 1712
BfuAI	ACCTGC	2 cut(s)	619, 946
BfuI	GTATCC	3 cut(s)	402, 1215, 1514
BlpI	GCTNAGC	1 cut(s)	131
BmcAI	AGTACT	3 cut(s)	266, 759, 1226
Bme1390I	CCNGG	3 cut(s)	224, 442, 785
Bme18I	GGWCC	2 cut(s)	283, 394
BmeRI	GACNNNNNGTC	1 cut(s)	1242
BmeT110I	CYCGRG	2 cut(s)	203, 252
BmgBI	CACGTC	1 cut(s)	310
BmgT120I	GGNCC	4 cut(s)	283, 394, 435, 1339
BmrFI	CCNGG	3 cut(s)	224, 442, 785
BmrI	ACTGGG	1 cut(s)	946
BmsI	GCATC	3 cut(s)	1063, 1270, 1632
BmuI	ACTGGG	1 cut(s)	946
BoxI	GACNNNNGTC	1 cut(s)	365
BpiI	GAAGAC	1 cut(s)	1456
BplI	GAGNNNNNCTC	2 cut(s)	146, 178
BpmI	CTGGAG	1 cut(s)	311
Bpu1102I	GCTNAGC	1 cut(s)	131
Bpu14I	TTCGAA	1 cut(s)	1212
BpuMI	CCSGG	2 cut(s)	442, 785
BsaAI	YACGTR	2 cut(s)	925, 1544
BsaBI	GATNNNNATC	1 cut(s)	980
BsaHI	GRCGYC	2 cut(s)	348, 1461
BsaI	GGTCTC	1 cut(s)	1079
BsaJI	CCNNGG	4 cut(s)	246, 441, 784, 1606
BsaXI	ACNNNNNCTCC	4 cut(s)	948, 978, 1082, 1112
Bsc4I	CCNNNNNNNGG	3 cut(s)	786, 1607, 1610
Bse118I	RCCGGY	1 cut(s)	1283
Bse1I	ACTGG	4 cut(s)	328, 921, 952, 1075
Bse8I	GATNNNNATC	1 cut(s)	980
BseBI	CCWGG	1 cut(s)	224
BseDI	CCNNGG	4 cut(s)	246, 441, 784, 1606
BseGI	GGATG	5 cut(s)	103, 640, 733, 1285, 1665
BseJI	GATNNNNATC	1 cut(s)	980
BseLI	CCNNNNNNNGG	3 cut(s)	786, 1607, 1610
BseMII	CTCAG	6 cut(s)	128, 145, 372, 1023, 1224, 1359
BseNI	ACTGG	4 cut(s)	328, 921, 952, 1075
BseRI	GAGGAG	2 cut(s)	167, 1493
BseSI	GKGCMC	2 cut(s)	1498, 1600
BseXI	GCAGC	6 cut(s)	191, 248, 401, 658, 688, 973
Bsh1236I	CGCG	6 cut(s)	248, 275, 296, 561, 1256, 1690
Bsh1285I	CGRYCG	1 cut(s)	243
BshFI	GGCC	5 cut(s)	197, 436, 779, 1341, 1408
BsiEI	CGRYCG	1 cut(s)	243
BsiHKAI	GWGCWC	4 cut(s)	132, 376, 1498, 1600
BsiHKCI	CYCGRG	2 cut(s)	203, 252
BsiSI	CCGG	5 cut(s)	278, 441, 512, 784, 1284
BslFI	GGGAC	1 cut(s)	1322
BslI	CCNNNNNNNGG	3 cut(s)	786, 1607, 1610
BsmAI	GTCTC	5 cut(s)	105, 1079, 1229, 1250, 1553
BsmBI	CGTCTC	1 cut(s)	1250
BsmFI	GGGAC	1 cut(s)	1322
BsmI	GAATGC	1 cut(s)	703
BsnI	GGCC	5 cut(s)	197, 436, 779, 1341, 1408
Bso31I	GGTCTC	1 cut(s)	1079
BsoBI	CYCGRG	2 cut(s)	203, 252
Bsp119I	TTCGAA	1 cut(s)	1212
Bsp1286I	GDGCHC	4 cut(s)	132, 376, 1498, 1600
Bsp143I	GATC	4 cut(s)	259, 876, 1297, 1693
Bsp1720I	GCTNAGC	1 cut(s)	131
Bsp19I	CCATGG	1 cut(s)	1606
BspANI	GGCC	5 cut(s)	197, 436, 779, 1341, 1408
BspCNI	CTCAG	6 cut(s)	127, 144, 373, 1024, 1225, 1360
BspFNI	CGCG	6 cut(s)	248, 275, 296, 561, 1256, 1690
BspMI	ACCTGC	2 cut(s)	619, 946
BspPI	GGATC	2 cut(s)	1292, 1688
BspQI	GCTCTTC	1 cut(s)	1652
BspT104I	TTCGAA	1 cut(s)	1212
BspTNI	GGTCTC	1 cut(s)	1079
BsrFI	RCCGGY	1 cut(s)	1283
BsrI	ACTGG	4 cut(s)	328, 921, 952, 1075
BssAI	RCCGGY	1 cut(s)	1283
BssECI	CCNNGG	4 cut(s)	246, 441, 784, 1606
BssMI	GATC	4 cut(s)	259, 876, 1297, 1693
BssNI	GRCGYC	2 cut(s)	348, 1461
BssSI	CACGAG	1 cut(s)	137
BssT1I	CCWWGG	1 cut(s)	1606
Bst2BI	CACGAG	1 cut(s)	137
Bst2UI	CCWGG	1 cut(s)	224
Bst4CI	ACNGT	4 cut(s)	487, 505, 659, 1703
Bst6I	CTCTTC	2 cut(s)	86, 1652
BstACI	GRCGYC	2 cut(s)	348, 1461
BstAPI	GCANNNNNTGC	1 cut(s)	835
BstBAI	YACGTR	2 cut(s)	925, 1544
BstBI	TTCGAA	1 cut(s)	1212
BstC8I	GCNNGC	4 cut(s)	120, 453, 616, 943
BstDEI	CTNAG	8 cut(s)	114, 131, 167, 381, 1032, 1233, 1312, 1368
BstDSI	CCRYGG	2 cut(s)	246, 1606
BstF5I	GGATG	5 cut(s)	103, 640, 733, 1285, 1665
BstFNI	CGCG	6 cut(s)	248, 275, 296, 561, 1256, 1690
BstH2I	RGCGCY	2 cut(s)	621, 1712
BstHHI	GCGC	4 cut(s)	277, 424, 620, 1711
BstKTI	GATC	4 cut(s)	262, 879, 1300, 1696
BstMAI	GTCTC	5 cut(s)	105, 1079, 1229, 1250, 1553
BstMBI	GATC	4 cut(s)	259, 876, 1297, 1693
BstMCI	CGRYCG	1 cut(s)	243
BstMWI	GCNNNNNNNGC	7 cut(s)	208, 242, 245, 254, 835, 947, 970
BstNI	CCWGG	1 cut(s)	224
BstPAI	GACNNNNGTC	1 cut(s)	365
BstSCI	CCNGG	3 cut(s)	222, 440, 783
BstSLI	GKGCMC	2 cut(s)	1498, 1600
BstUI	CGCG	6 cut(s)	248, 275, 296, 561, 1256, 1690
BstV1I	GCAGC	6 cut(s)	191, 248, 401, 658, 688, 973
BstV2I	GAAGAC	1 cut(s)	1456
BsuI	GTATCC	3 cut(s)	402, 1215, 1514
BsuRI	GGCC	5 cut(s)	197, 436, 779, 1341, 1408
BtgI	CCRYGG	2 cut(s)	246, 1606
BtrI	CACGTC	1 cut(s)	310
BtsCI	GGATG	5 cut(s)	103, 640, 733, 1285, 1665
BtsIMutI	CAGTG	3 cut(s)	497, 1068, 1365
BveI	ACCTGC	2 cut(s)	619, 946
Cac8I	GCNNGC	4 cut(s)	120, 453, 616, 943
CfoI	GCGC	4 cut(s)	277, 424, 620, 1711
Cfr10I	RCCGGY	1 cut(s)	1283
Cfr13I	GGNCC	4 cut(s)	283, 394, 435, 1339
Cfr42I	CCGCGG	1 cut(s)	249
CseI	GACGC	2 cut(s)	484, 534
Csp6I	GTAC	6 cut(s)	265, 655, 758, 1193, 1225, 1511
CviAII	CATG	3 cut(s)	1420, 1508, 1607
CviQI	GTAC	6 cut(s)	265, 655, 758, 1193, 1225, 1511
DdeI	CTNAG	8 cut(s)	114, 131, 167, 381, 1032, 1233, 1312, 1368
DpnI	GATC	4 cut(s)	261, 878, 1299, 1695
DpnII	GATC	4 cut(s)	259, 876, 1297, 1693
DraI	TTTAAA	1 cut(s)	913
DriI	GACNNNNNGTC	1 cut(s)	1242
EaeI	YGGCCR	2 cut(s)	195, 777
Eam1104I	CTCTTC	2 cut(s)	86, 1652
Eam1105I	GACNNNNNGTC	1 cut(s)	1242
EarI	CTCTTC	2 cut(s)	86, 1652
EciI	GGCGGA	1 cut(s)	259
Ecl136II	GAGCTC	2 cut(s)	130, 374
Eco130I	CCWWGG	1 cut(s)	1606
Eco147I	AGGCCT	1 cut(s)	1408
Eco24I	GRGCYC	2 cut(s)	132, 376
Eco31I	GGTCTC	1 cut(s)	1079
Eco47I	GGWCC	2 cut(s)	283, 394
Eco53kI	GAGCTC	2 cut(s)	130, 374
Eco57I	CTGAAG	3 cut(s)	808, 1521, 1570
Eco72I	CACGTG	1 cut(s)	1544
Eco88I	CYCGRG	2 cut(s)	203, 252
EcoICRI	GAGCTC	2 cut(s)	130, 374
EcoRII	CCWGG	1 cut(s)	222
EcoT14I	CCWWGG	1 cut(s)	1606
EcoT38I	GRGCYC	2 cut(s)	132, 376
ErhI	CCWWGG	1 cut(s)	1606
Esp3I	CGTCTC	1 cut(s)	1250
FaeI	CATG	3 cut(s)	1423, 1511, 1610
FaqI	GGGAC	1 cut(s)	1322
FatI	CATG	3 cut(s)	1419, 1507, 1606
FauI	CCCGC	1 cut(s)	1695
FbaI	TGATCA	1 cut(s)	259
FblI	GTMKAC	1 cut(s)	345
FokI	GGATG	5 cut(s)	90, 647, 740, 1292, 1652
FriOI	GRGCYC	2 cut(s)	132, 376
FspBI	CTAG	1 cut(s)	1706
FspI	TGCGCA	1 cut(s)	423
GlaI	GCGC	4 cut(s)	276, 423, 619, 1710
GsuI	CTGGAG	1 cut(s)	311
HaeII	RGCGCY	2 cut(s)	621, 1712
HaeIII	GGCC	5 cut(s)	197, 436, 779, 1341, 1408
HapII	CCGG	5 cut(s)	278, 441, 512, 784, 1284
HgaI	GACGC	2 cut(s)	484, 534
HhaI	GCGC	4 cut(s)	277, 424, 620, 1711
Hin1I	GRCGYC	2 cut(s)	348, 1461
Hin1II	CATG	3 cut(s)	1423, 1511, 1610
Hin6I	GCGC	4 cut(s)	275, 422, 618, 1709
HinP1I	GCGC	4 cut(s)	275, 422, 618, 1709
HincII	GTYRAC	2 cut(s)	346, 1129
HindII	GTYRAC	2 cut(s)	346, 1129
HinfI	GANTC	7 cut(s)	110, 155, 563, 798, 805, 1237, 1580
HpaI	GTTAAC	1 cut(s)	1129
HpaII	CCGG	5 cut(s)	278, 441, 512, 784, 1284
HphI	GGTGA	5 cut(s)	547, 948, 1240, 1376, 1487
Hpy166II	GTNNAC	7 cut(s)	77, 346, 483, 1068, 1129, 1496, 1598
Hpy188III	TCNNGA	8 cut(s)	93, 107, 205, 499, 802, 1076, 1439, 1697
Hpy8I	GTNNAC	7 cut(s)	77, 346, 483, 1068, 1129, 1496, 1598
Hpy99I	CGWCG	6 cut(s)	219, 311, 350, 500, 550, 1433
HpyCH4III	ACNGT	4 cut(s)	487, 505, 659, 1703
HpyCH4IV	ACGT	9 cut(s)	309, 348, 924, 1243, 1461, 1501, 1531, 1543, 1633
HpyCH4V	TGCA	4 cut(s)	614, 640, 1496, 1598
HpyF10VI	GCNNNNNNNGC	7 cut(s)	208, 242, 245, 254, 835, 947, 970
HpyF3I	CTNAG	8 cut(s)	114, 131, 167, 381, 1032, 1233, 1312, 1368
HpySE526I	ACGT	9 cut(s)	309, 348, 924, 1243, 1461, 1501, 1531, 1543, 1633
Hsp92I	GRCGYC	2 cut(s)	348, 1461
Hsp92II	CATG	3 cut(s)	1423, 1511, 1610
HspAI	GCGC	4 cut(s)	275, 422, 618, 1709
Ksp22I	TGATCA	1 cut(s)	259
KspAI	GTTAAC	1 cut(s)	1129
KspI	CCGCGG	1 cut(s)	249
Kzo9I	GATC	4 cut(s)	259, 876, 1297, 1693
LguI	GCTCTTC	1 cut(s)	1652
LmnI	GCTCC	5 cut(s)	216, 330, 371, 969, 1101
Lsp1109I	GCAGC	6 cut(s)	191, 248, 401, 658, 688, 973
LweI	GCATC	3 cut(s)	1063, 1270, 1632
MaeI	CTAG	1 cut(s)	1706
MaeII	ACGT	9 cut(s)	309, 348, 924, 1243, 1461, 1501, 1531, 1543, 1633
MaeIII	GTNAC	5 cut(s)	47, 67, 312, 499, 954
MalI	GATC	4 cut(s)	261, 878, 1299, 1695
MboI	GATC	4 cut(s)	259, 876, 1297, 1693
MboII	GAAGA	8 cut(s)	27, 30, 73, 347, 349, 814, 1456, 1639
MfeI	CAATTG	1 cut(s)	609
MhlI	GDGCHC	4 cut(s)	132, 376, 1498, 1600
MluCI	AATT	6 cut(s)	609, 690, 1168, 1450, 1517, 1548
MlyI	GAGTC	4 cut(s)	164, 572, 814, 1231
MmeI	TCCRAC	2 cut(s)	349, 793
MroXI	GAANNNNTTC	2 cut(s)	479, 1263
MseI	TTAA	3 cut(s)	912, 1128, 1220
MslI	CAYNNNNRTG	1 cut(s)	1059
MspA1I	CMGCKG	2 cut(s)	248, 776
MspI	CCGG	5 cut(s)	278, 441, 512, 784, 1284
MspR9I	CCNGG	3 cut(s)	224, 442, 785
MssI	GTTTAAAC	1 cut(s)	913
MunI	CAATTG	1 cut(s)	609
Mva1269I	GAATGC	1 cut(s)	703
MvaI	CCWGG	1 cut(s)	224
MvnI	CGCG	6 cut(s)	248, 275, 296, 561, 1256, 1690
MwoI	GCNNNNNNNGC	7 cut(s)	208, 242, 245, 254, 835, 947, 970
NciI	CCSGG	2 cut(s)	442, 785
NcoI	CCATGG	1 cut(s)	1606
NdeII	GATC	4 cut(s)	259, 876, 1297, 1693
NlaIII	CATG	3 cut(s)	1423, 1511, 1610
NmuCI	GTSAC	5 cut(s)	47, 67, 312, 499, 954
NsbI	TGCGCA	1 cut(s)	423
NspV	TTCGAA	1 cut(s)	1212
PaeR7I	CTCGAG	2 cut(s)	203, 252
PaqCI	CACCTGC	1 cut(s)	619
PceI	AGGCCT	1 cut(s)	1408
PciSI	GCTCTTC	1 cut(s)	1652
PctI	GAATGC	1 cut(s)	703
PdmI	GAANNNNTTC	2 cut(s)	479, 1263
PfeI	GAWTC	3 cut(s)	110, 798, 1580
PleI	GAGTC	4 cut(s)	163, 571, 813, 1231
PmaCI	CACGTG	1 cut(s)	1544
PmeI	GTTTAAAC	1 cut(s)	913
PmlI	CACGTG	1 cut(s)	1544
PpsI	GAGTC	4 cut(s)	163, 571, 813, 1231
Ppu21I	YACGTR	2 cut(s)	925, 1544
PshAI	GACNNNNGTC	1 cut(s)	365
Psp124BI	GAGCTC	2 cut(s)	132, 376
Psp6I	CCWGG	1 cut(s)	222
PspCI	CACGTG	1 cut(s)	1544
PspGI	CCWGG	1 cut(s)	222
PspPI	GGNCC	4 cut(s)	283, 394, 435, 1339
PspXI	VCTCGAGB	1 cut(s)	252
RsaI	GTAC	6 cut(s)	266, 656, 759, 1194, 1226, 1512
RsaNI	GTAC	6 cut(s)	265, 655, 758, 1193, 1225, 1511
RseI	CAYNNNNRTG	1 cut(s)	1059
SacI	GAGCTC	2 cut(s)	132, 376
SacII	CCGCGG	1 cut(s)	249
SalI	GTCGAC	1 cut(s)	344
SapI	GCTCTTC	1 cut(s)	1652
SaqAI	TTAA	3 cut(s)	912, 1128, 1220
Sau3AI	GATC	4 cut(s)	259, 876, 1297, 1693
Sau96I	GGNCC	4 cut(s)	283, 394, 435, 1339
ScaI	AGTACT	3 cut(s)	266, 759, 1226
SchI	GAGTC	4 cut(s)	164, 572, 814, 1231
ScrFI	CCNGG	3 cut(s)	224, 442, 785
SduI	GDGCHC	4 cut(s)	132, 376, 1498, 1600
SfaNI	GCATC	3 cut(s)	1063, 1270, 1632
Sfr274I	CTCGAG	2 cut(s)	203, 252
Sfr303I	CCGCGG	1 cut(s)	249
SfuI	TTCGAA	1 cut(s)	1212
SgrBI	CCGCGG	1 cut(s)	249
SinI	GGWCC	2 cut(s)	283, 394
SlaI	CTCGAG	2 cut(s)	203, 252
SmiMI	CAYNNNNRTG	1 cut(s)	1059
SmlI	CTYRAG	2 cut(s)	203, 252
SmoI	CTYRAG	2 cut(s)	203, 252
Sse9I	AATT	6 cut(s)	609, 690, 1168, 1450, 1517, 1548
SseBI	AGGCCT	1 cut(s)	1408
SspMI	CTAG	1 cut(s)	1706
SstI	GAGCTC	2 cut(s)	132, 376
StuI	AGGCCT	1 cut(s)	1408
StyD4I	CCNGG	3 cut(s)	222, 440, 783
StyI	CCWWGG	1 cut(s)	1606
TaaI	ACNGT	4 cut(s)	487, 505, 659, 1703
TaiI	ACGT	9 cut(s)	312, 351, 927, 1246, 1464, 1504, 1534, 1546, 1636
TasI	AATT	6 cut(s)	609, 690, 1168, 1450, 1517, 1548
TatI	WGTACW	4 cut(s)	264, 654, 757, 1224
TauI	GCSGC	8 cut(s)	197, 222, 248, 251, 275, 296, 561, 779
TfiI	GAWTC	3 cut(s)	110, 798, 1580
Tru1I	TTAA	3 cut(s)	912, 1128, 1220
Tru9I	TTAA	3 cut(s)	912, 1128, 1220
TscAI	CASTG	3 cut(s)	497, 1075, 1372
TseFI	GTSAC	5 cut(s)	47, 67, 312, 499, 954
TseI	GCWGC	6 cut(s)	179, 236, 414, 671, 701, 961
Tsp45I	GTSAC	5 cut(s)	47, 67, 312, 499, 954
TspDTI	ATGAA	2 cut(s)	350, 1456
TspGWI	ACGGA	2 cut(s)	203, 377
TspRI	CASTG	3 cut(s)	497, 1075, 1372
VneI	GTGCAC	2 cut(s)	1494, 1596
VpaK11BI	GGWCC	2 cut(s)	283, 394
XcmI	CCANNNNNNNNNTGG	2 cut(s)	809, 1613
XhoI	CTCGAG	2 cut(s)	203, 252
XmiI	GTMKAC	1 cut(s)	345
XmnI	GAANNNNTTC	2 cut(s)	479, 1263
XspI	CTAG	1 cut(s)	1706
ZraI	GACGTC	2 cut(s)	349, 1462
ZrmI	AGTACT	3 cut(s)	266, 759, 1226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.