Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001714

Physical Location & Seq

Genomic Coordinates Forward (+)

40008959 .. 40011188

Gene Structure 2230 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G020030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGTCTCATCCAGAATCTCAGCCAGCCACCGAGCTCAGCCACGAGCCAGAGAACGAGGAGTCAGCCTCTCTTGGCAAAAAGGCAGCAAAGAAAAAAGCGGCCAAGCTCGAGAAGCTACGTCGCCGCCAGGAGCGAGAAGCAGCGACCGCCGCGGCTCGCGCTGATCAGTACTCCGCAGCGCCGGAGGACCAACTCGCCGCGAACTATGGCGACGTGTCACTCATTCAGCTCCAGTCGATGGAGATGGTCGACGTCAATCTTCGGACGGAGGTCGGAGCTCTAACTGAGGCGTTGAAGGACCAGAAGGTTCGGATACGGGGCCGTGCGCAGACGATTAGACCCACCGGGGAGAAGCTGGCGTTTATTGTGGTCAGAGAGAAGGGGTTCACGGTTCAGTGCGTCGTGACGGTTCAGCCGGAGATGGTGAGCTGTCAGATGGTGAAGTACGCGTCGAAGTTGAGCCGCGAGTCGATTATTGACATTGAAGGGATTGTGTCTAAACCTGATATGGCAATTGCAGGCGCTTCACAGCAGGTGGATGTGCAAGTTAGAAAGCTGTACTGTATAAGTAGGGCTGCTGTTTTACCTATTGAAATTGAGAATGCTGCTCGAAGTGAAAAACCTAATGAGGATGGACAGAATACTCGCTTGAATAACCGAGTACTTGACTTGCGAACAGCGGCCAACCGGGGGATTTTCCGAATCCAGAGTCAAGTTGGAACTATCTTCAGGCAGTTCTTGCTGTCCGAAGGGTTTGTTGAAATCCATACACCAAAACTGATCGCTGGTTCAAGTGAAGGTGGGGCTTCGGTGTTTAAACTGGACTACGTGAAGGGGCAACCTGCCTGCCTTGCCCAGTCACCGCAGCTCCACAAGCAGATGTCCATCTGTGCTGACTTTGGTCGTGTTTTCGAGGTTGGTTCTGTTTTCAGAGCTGAGAACTCTGATACACATAGGCATCTATGTGAGTTCACTGGTCTCGATATTGAGATGGAGATTGAGTGGAGCTATTTTGAGGTTATGGATATTGTTAACAGGTTGTTTGTCAATATGTTTGACTATTTGAACAAAAATTGTGAGAAGGAACTTGCAGCTGTACGAAGGCAGTATCCCTTCGAACCATTAAAGTACTTGCCTGAGACTCTACGTCTCACCTTCGCGGAAGTTGATCCTATGGGGGACTTGGATACTAAAAAAGAGAGGAAGTTGGGCCATTATAAGTGGAAATATGGCACTGAGTTCTACATACTTCACCGCTATCCGTTGGCTGCGAGGCCTTTCTATACCATGCCTTGCGACGATAATCCTGAATACAGCAATTCGTTTGACGTCTTCATTCGAGGTGAGGAGATTATATCAGGTGCACAACGTATCCATGTACCAGAATTATTGGTCGAACGTGCTTCAGCACGTGGAATTGAAGTAGAGACAATATCAACATATATTGATTCCTTCAGATATGGTGCACCTCCCCATGGTGGATTTGGAGTAGGGCTGGAGCGTGTTGTGATGCTCTTCTGTGGTTTGAATAACATCCGCAAAACATCTTTATTCCCGCGTGATCCAGACCGGCTAGCGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004815 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006422 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0016070 GO:0016874 GO:0016875 GO:0017101 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045202 GO:0046483 GO:0046686 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0090304 GO:0098542 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2 tRNA_anti-codon

Protein Analysis

527

Amino Acids

59.43

Weight (kDa)

6.42

Isoelectric Point (pI)

45.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2	PF00152	213 - 521	3.5e-76	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26870 AT4G31180 AT4G31180
fragaria_vesca	FvH4_2g15870 FvH4_2g15910 FvH4_2g30550
malus_domestica	MD08G1134400.v1.1 MD12G1153800.v1.1 MD14G1143300.v1.1 MD15G1113400.v1.1
prunus_persica	Prupe.1G463800_v2.0.a1 Prupe.4G141600_v2.0.a1 Prupe.8G055000_v2.0.a1
pyrus_communis	pycom08g11340 pycom15g10170 pycom16g11710
rosa_chinensis	RchiOBHm_Chr5g0032141 RchiOBHm_Chr5g0032161 RchiOBHm_Chr6g0278871 RchiOBHm_Chr6g0312531
rosa_laevigata	RLG00000010321 RLG00000033368
rosa_multiflora	Rmu_co8427103.1_g000001 Rmu_sc0003031.1_g000023 Rmu_sc0005375.1_g000002 Rmu_sc0005375.1_g000011 Rmu_sc0008363.1_g000011 Rmu_sc0043080.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048240 Rroxscaffold_1G00048270 Rroxscaffold_7G00156770
rosa_rugosa	Rorug06G0119800 Rorug06G0120000 Rorug06G0123400 Rorug06G0396100 Rorug06G0396200
rosa_samantha	Rh5DG228900 Rh6AG228300 Rh6AG513500 Rh6BG233900 Rh6BG234000 Rh6BG524200 Rh6BG526500 Rh6CG236300 Rh6CG531400 Rh6DG515600
rosa_wichuraiana	Rw6G020030 Rw6G044650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1218
AarI	CACCTGC	1 cut(s)	523
AatII	GACGTC	2 cut(s)	255, 1332
Acc16I	TGCGCA	1 cut(s)	327
Acc36I	ACCTGC	2 cut(s)	523, 850
AccB7I	CCANNNNNTGG	1 cut(s)	238
AccI	GTMKAC	1 cut(s)	249
AccII	CGCG	7 cut(s)	152, 159, 200, 449, 465, 1160, 1558
AclWI	GGATC	2 cut(s)	1163, 1556
AcoI	YGGCCR	2 cut(s)	99, 681
AcuI	CTGAAG	3 cut(s)	712, 1389, 1438
AcvI	CACGTG	1 cut(s)	1412
AcyI	GRCGYC	2 cut(s)	252, 1329
AfaI	GTAC	7 cut(s)	170, 446, 560, 663, 1098, 1130, 1380
AfiI	CCNNNNNNNGG	4 cut(s)	238, 690, 1475, 1478
AflIII	ACRYGT	2 cut(s)	213, 447
AgsI	TTSAA	9 cut(s)	295, 485, 593, 652, 761, 792, 1066, 1421, 1528
AhdI	GACNNNNNGTC	1 cut(s)	1146
AjiI	CACGTC	1 cut(s)	214
AjnI	CCWGG	1 cut(s)	126
Alw21I	GWGCWC	4 cut(s)	36, 280, 1366, 1468
Alw26I	GTCTC	5 cut(s)	9, 983, 1133, 1154, 1421
Alw44I	GTGCAC	2 cut(s)	1362, 1464
AlwI	GGATC	2 cut(s)	1163, 1556
Ama87I	CYCGRG	1 cut(s)	107
AoxI	GGCC	5 cut(s)	99, 319, 681, 1210, 1274
ApaLI	GTGCAC	2 cut(s)	1362, 1464
ApeKI	GCWGC	8 cut(s)	83, 140, 176, 575, 605, 865, 1091, 1268
ArsI	GACNNNNNNTTYG	2 cut(s)	694, 726
Asp700I	GAANNNNTTC	1 cut(s)	383
AspLEI	GCGC	5 cut(s)	161, 181, 328, 524, 1579
AspS9I	GGNCC	4 cut(s)	187, 298, 319, 1210
AsuC2I	CCSGG	2 cut(s)	346, 689
AsuHPI	GGTGA	6 cut(s)	436, 451, 852, 1144, 1244, 1355
AsuII	TTCGAA	1 cut(s)	1116
AsuNHI	GCTAGC	1 cut(s)	1573
AvaI	CYCGRG	1 cut(s)	107
AvaII	GGWCC	2 cut(s)	187, 298
BaeGI	GKGCMC	2 cut(s)	1366, 1468
BanII	GRGCYC	2 cut(s)	36, 280
BauI	CACGAG	1 cut(s)	41
BbrPI	CACGTG	1 cut(s)	1412
BbsI	GAAGAC	1 cut(s)	1324
Bbv12I	GWGCWC	4 cut(s)	36, 280, 1366, 1468
BbvI	GCAGC	8 cut(s)	95, 152, 188, 562, 592, 877, 1103, 1255
BccI	CCATC	7 cut(s)	232, 238, 415, 430, 626, 893, 985
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	1 cut(s)	128
BciVI	GTATCC	4 cut(s)	306, 1119, 1180, 1382
BclI	TGATCA	1 cut(s)	163
BcnI	CCSGG	2 cut(s)	346, 689
BcoDI	GTCTC	5 cut(s)	9, 983, 1133, 1154, 1421
BfaI	CTAG	1 cut(s)	1574
BfoI	RGCGCY	3 cut(s)	182, 525, 1580
BfuAI	ACCTGC	2 cut(s)	523, 850
BfuI	GTATCC	4 cut(s)	306, 1119, 1180, 1382
BlpI	GCTNAGC	1 cut(s)	35
BmcAI	AGTACT	3 cut(s)	170, 663, 1130
Bme1390I	CCNGG	3 cut(s)	128, 346, 689
Bme18I	GGWCC	2 cut(s)	187, 298
BmeRI	GACNNNNNGTC	1 cut(s)	1146
BmeT110I	CYCGRG	1 cut(s)	107
BmgBI	CACGTC	1 cut(s)	214
BmgT120I	GGNCC	4 cut(s)	187, 298, 319, 1210
BmiI	GGNNCC	1 cut(s)	320
BmrFI	CCNGG	3 cut(s)	128, 346, 689
BmrI	ACTGGG	1 cut(s)	850
BmsI	GCATC	2 cut(s)	967, 1500
BmtI	GCTAGC	1 cut(s)	1577
BmuI	ACTGGG	1 cut(s)	850
BoxI	GACNNNNGTC	2 cut(s)	269, 900
BpiI	GAAGAC	1 cut(s)	1324
BplI	GAGNNNNNCTC	2 cut(s)	50, 82
BpmI	CTGGAG	2 cut(s)	215, 1517
Bpu1102I	GCTNAGC	1 cut(s)	35
Bpu14I	TTCGAA	1 cut(s)	1116
BpuMI	CCSGG	2 cut(s)	346, 689
BsaAI	YACGTR	2 cut(s)	829, 1412
BsaBI	GATNNNNATC	1 cut(s)	884
BsaHI	GRCGYC	2 cut(s)	252, 1329
BsaI	GGTCTC	1 cut(s)	983
BsaJI	CCNNGG	4 cut(s)	150, 345, 688, 1474
BsaXI	ACNNNNNCTCC	4 cut(s)	852, 882, 986, 1016
Bsc4I	CCNNNNNNNGG	4 cut(s)	238, 690, 1475, 1478
Bse118I	RCCGGY	1 cut(s)	1569
Bse1I	ACTGG	4 cut(s)	232, 825, 856, 979
Bse8I	GATNNNNATC	1 cut(s)	884
BseBI	CCWGG	1 cut(s)	128
BseDI	CCNNGG	4 cut(s)	150, 345, 688, 1474
BseGI	GGATG	4 cut(s)	7, 544, 637, 1533
BseJI	GATNNNNATC	1 cut(s)	884
BseLI	CCNNNNNNNGG	4 cut(s)	238, 690, 1475, 1478
BseMII	CTCAG	6 cut(s)	32, 49, 276, 927, 1128, 1227
BseNI	ACTGG	4 cut(s)	232, 825, 856, 979
BseRI	GAGGAG	2 cut(s)	71, 1361
BseSI	GKGCMC	2 cut(s)	1366, 1468
BseXI	GCAGC	8 cut(s)	95, 152, 188, 562, 592, 877, 1103, 1255
Bsh1236I	CGCG	7 cut(s)	152, 159, 200, 449, 465, 1160, 1558
Bsh1285I	CGRYCG	1 cut(s)	147
BshFI	GGCC	5 cut(s)	101, 321, 683, 1212, 1276
BsiEI	CGRYCG	1 cut(s)	147
BsiHKAI	GWGCWC	4 cut(s)	36, 280, 1366, 1468
BsiHKCI	CYCGRG	1 cut(s)	107
BsiSI	CCGG	5 cut(s)	182, 345, 416, 688, 1570
BslFI	GGGAC	1 cut(s)	1193
BslI	CCNNNNNNNGG	4 cut(s)	238, 690, 1475, 1478
BsmAI	GTCTC	5 cut(s)	9, 983, 1133, 1154, 1421
BsmBI	CGTCTC	1 cut(s)	1154
BsmFI	GGGAC	1 cut(s)	1193
BsmI	GAATGC	1 cut(s)	607
BsnI	GGCC	5 cut(s)	101, 321, 683, 1212, 1276
Bso31I	GGTCTC	1 cut(s)	983
BsoBI	CYCGRG	1 cut(s)	107
Bsp119I	TTCGAA	1 cut(s)	1116
Bsp1286I	GDGCHC	4 cut(s)	36, 280, 1366, 1468
Bsp143I	GATC	4 cut(s)	163, 780, 1168, 1561
Bsp1720I	GCTNAGC	1 cut(s)	35
Bsp19I	CCATGG	1 cut(s)	1474
BspANI	GGCC	5 cut(s)	101, 321, 683, 1212, 1276
BspCNI	CTCAG	6 cut(s)	31, 48, 277, 928, 1129, 1228
BspFNI	CGCG	7 cut(s)	152, 159, 200, 449, 465, 1160, 1558
BspLI	GGNNCC	1 cut(s)	320
BspMI	ACCTGC	2 cut(s)	523, 850
BspOI	GCTAGC	1 cut(s)	1577
BspPI	GGATC	2 cut(s)	1163, 1556
BspQI	GCTCTTC	1 cut(s)	1520
BspT104I	TTCGAA	1 cut(s)	1116
BspTNI	GGTCTC	1 cut(s)	983
BsrFI	RCCGGY	1 cut(s)	1569
BsrI	ACTGG	4 cut(s)	232, 825, 856, 979
BssAI	RCCGGY	1 cut(s)	1569
BssECI	CCNNGG	4 cut(s)	150, 345, 688, 1474
BssMI	GATC	4 cut(s)	163, 780, 1168, 1561
BssNI	GRCGYC	2 cut(s)	252, 1329
BssSI	CACGAG	1 cut(s)	41
BssT1I	CCWWGG	1 cut(s)	1474
Bst2BI	CACGAG	1 cut(s)	41
Bst2UI	CCWGG	1 cut(s)	128
Bst4CI	ACNGT	3 cut(s)	391, 409, 563
Bst6I	CTCTTC	1 cut(s)	1520
BstACI	GRCGYC	2 cut(s)	252, 1329
BstAPI	GCANNNNNTGC	1 cut(s)	739
BstBAI	YACGTR	2 cut(s)	829, 1412
BstBI	TTCGAA	1 cut(s)	1116
BstC8I	GCNNGC	6 cut(s)	24, 157, 357, 520, 847, 1575
BstDEI	CTNAG	6 cut(s)	18, 35, 285, 936, 1137, 1236
BstDSI	CCRYGG	2 cut(s)	150, 1474
BstF5I	GGATG	4 cut(s)	7, 544, 637, 1533
BstFNI	CGCG	7 cut(s)	152, 159, 200, 449, 465, 1160, 1558
BstH2I	RGCGCY	3 cut(s)	182, 525, 1580
BstHHI	GCGC	5 cut(s)	161, 181, 328, 524, 1579
BstKTI	GATC	4 cut(s)	166, 783, 1171, 1564
BstMAI	GTCTC	5 cut(s)	9, 983, 1133, 1154, 1421
BstMBI	GATC	4 cut(s)	163, 780, 1168, 1561
BstMCI	CGRYCG	1 cut(s)	147
BstMWI	GCNNNNNNNGC	7 cut(s)	112, 146, 149, 158, 739, 851, 874
BstNI	CCWGG	1 cut(s)	128
BstPAI	GACNNNNGTC	2 cut(s)	269, 900
BstSCI	CCNGG	3 cut(s)	126, 344, 687
BstSLI	GKGCMC	2 cut(s)	1366, 1468
BstUI	CGCG	7 cut(s)	152, 159, 200, 449, 465, 1160, 1558
BstV1I	GCAGC	8 cut(s)	95, 152, 188, 562, 592, 877, 1103, 1255
BstV2I	GAAGAC	1 cut(s)	1324
BsuI	GTATCC	4 cut(s)	306, 1119, 1180, 1382
BsuRI	GGCC	5 cut(s)	101, 321, 683, 1212, 1276
BtgI	CCRYGG	2 cut(s)	150, 1474
BtrI	CACGTC	1 cut(s)	214
BtsCI	GGATG	4 cut(s)	7, 544, 637, 1533
BtsIMutI	CAGTG	3 cut(s)	401, 972, 1233
BveI	ACCTGC	2 cut(s)	523, 850
Cac8I	GCNNGC	6 cut(s)	24, 157, 357, 520, 847, 1575
CfoI	GCGC	5 cut(s)	161, 181, 328, 524, 1579
Cfr10I	RCCGGY	1 cut(s)	1569
Cfr13I	GGNCC	4 cut(s)	187, 298, 319, 1210
Cfr42I	CCGCGG	1 cut(s)	153
CseI	GACGC	2 cut(s)	388, 438
Csp6I	GTAC	7 cut(s)	169, 445, 559, 662, 1097, 1129, 1379
CviAII	CATG	3 cut(s)	1288, 1376, 1475
CviQI	GTAC	7 cut(s)	169, 445, 559, 662, 1097, 1129, 1379
DdeI	CTNAG	6 cut(s)	18, 35, 285, 936, 1137, 1236
DpnI	GATC	4 cut(s)	165, 782, 1170, 1563
DpnII	GATC	4 cut(s)	163, 780, 1168, 1561
DraI	TTTAAA	1 cut(s)	817
DriI	GACNNNNNGTC	1 cut(s)	1146
EaeI	YGGCCR	2 cut(s)	99, 681
Eam1104I	CTCTTC	1 cut(s)	1520
Eam1105I	GACNNNNNGTC	1 cut(s)	1146
EarI	CTCTTC	1 cut(s)	1520
Ecl136II	GAGCTC	2 cut(s)	34, 278
Eco130I	CCWWGG	1 cut(s)	1474
Eco147I	AGGCCT	1 cut(s)	1276
Eco24I	GRGCYC	2 cut(s)	36, 280
Eco31I	GGTCTC	1 cut(s)	983
Eco47I	GGWCC	2 cut(s)	187, 298
Eco53kI	GAGCTC	2 cut(s)	34, 278
Eco57I	CTGAAG	3 cut(s)	712, 1389, 1438
Eco72I	CACGTG	1 cut(s)	1412
Eco88I	CYCGRG	1 cut(s)	107
EcoICRI	GAGCTC	2 cut(s)	34, 278
EcoRII	CCWGG	1 cut(s)	126
EcoT14I	CCWWGG	1 cut(s)	1474
EcoT38I	GRGCYC	2 cut(s)	36, 280
ErhI	CCWWGG	1 cut(s)	1474
Esp3I	CGTCTC	1 cut(s)	1154
FaeI	CATG	3 cut(s)	1291, 1379, 1478
FaqI	GGGAC	1 cut(s)	1193
FatI	CATG	3 cut(s)	1287, 1375, 1474
FauI	CCCGC	1 cut(s)	1563
FbaI	TGATCA	1 cut(s)	163
FblI	GTMKAC	1 cut(s)	249
FokI	GGATG	3 cut(s)	551, 644, 1520
FriOI	GRGCYC	2 cut(s)	36, 280
FspBI	CTAG	1 cut(s)	1574
FspI	TGCGCA	1 cut(s)	327
GlaI	GCGC	5 cut(s)	160, 180, 327, 523, 1578
GsuI	CTGGAG	2 cut(s)	215, 1517
HaeII	RGCGCY	3 cut(s)	182, 525, 1580
HaeIII	GGCC	5 cut(s)	101, 321, 683, 1212, 1276
HapII	CCGG	5 cut(s)	182, 345, 416, 688, 1570
HgaI	GACGC	2 cut(s)	388, 438
HhaI	GCGC	5 cut(s)	161, 181, 328, 524, 1579
Hin1I	GRCGYC	2 cut(s)	252, 1329
Hin1II	CATG	3 cut(s)	1291, 1379, 1478
Hin6I	GCGC	5 cut(s)	159, 179, 326, 522, 1577
HinP1I	GCGC	5 cut(s)	159, 179, 326, 522, 1577
HincII	GTYRAC	2 cut(s)	250, 1033
HindII	GTYRAC	2 cut(s)	250, 1033
HinfI	GANTC	7 cut(s)	14, 59, 467, 702, 709, 1141, 1448
HpaI	GTTAAC	1 cut(s)	1033
HpaII	CCGG	5 cut(s)	182, 345, 416, 688, 1570
HphI	GGTGA	6 cut(s)	436, 451, 852, 1144, 1244, 1355
Hpy166II	GTNNAC	6 cut(s)	250, 387, 972, 1033, 1364, 1466
Hpy188III	TCNNGA	7 cut(s)	11, 109, 403, 706, 980, 1307, 1565
Hpy8I	GTNNAC	6 cut(s)	250, 387, 972, 1033, 1364, 1466
Hpy99I	CGWCG	6 cut(s)	123, 215, 254, 404, 454, 1301
HpyCH4III	ACNGT	3 cut(s)	391, 409, 563
HpyCH4IV	ACGT	9 cut(s)	118, 213, 252, 828, 1147, 1329, 1369, 1399, 1411
HpyCH4V	TGCA	5 cut(s)	518, 544, 1091, 1364, 1466
HpyF10VI	GCNNNNNNNGC	7 cut(s)	112, 146, 149, 158, 739, 851, 874
HpyF3I	CTNAG	6 cut(s)	18, 35, 285, 936, 1137, 1236
HpySE526I	ACGT	9 cut(s)	118, 213, 252, 828, 1147, 1329, 1369, 1399, 1411
Hsp92I	GRCGYC	2 cut(s)	252, 1329
Hsp92II	CATG	3 cut(s)	1291, 1379, 1478
HspAI	GCGC	5 cut(s)	159, 179, 326, 522, 1577
Ksp22I	TGATCA	1 cut(s)	163
KspAI	GTTAAC	1 cut(s)	1033
KspI	CCGCGG	1 cut(s)	153
Kzo9I	GATC	4 cut(s)	163, 780, 1168, 1561
LguI	GCTCTTC	1 cut(s)	1520
LmnI	GCTCC	6 cut(s)	130, 234, 275, 873, 1005, 1498
Lsp1109I	GCAGC	8 cut(s)	95, 152, 188, 562, 592, 877, 1103, 1255
LweI	GCATC	2 cut(s)	967, 1500
MaeI	CTAG	1 cut(s)	1574
MaeII	ACGT	9 cut(s)	118, 213, 252, 828, 1147, 1329, 1369, 1399, 1411
MaeIII	GTNAC	3 cut(s)	216, 403, 858
MalI	GATC	4 cut(s)	165, 782, 1170, 1563
MboI	GATC	4 cut(s)	163, 780, 1168, 1561
MboII	GAAGA	4 cut(s)	251, 718, 1324, 1507
MfeI	CAATTG	1 cut(s)	513
MhlI	GDGCHC	4 cut(s)	36, 280, 1366, 1468
MluCI	AATT	6 cut(s)	513, 594, 1072, 1318, 1385, 1416
MluI	ACGCGT	1 cut(s)	447
MlyI	GAGTC	4 cut(s)	68, 476, 718, 1135
MmeI	TCCRAC	2 cut(s)	253, 697
MroXI	GAANNNNTTC	1 cut(s)	383
MseI	TTAA	3 cut(s)	816, 1032, 1124
MslI	CAYNNNNRTG	1 cut(s)	963
MspA1I	CMGCKG	3 cut(s)	152, 680, 1094
MspI	CCGG	5 cut(s)	182, 345, 416, 688, 1570
MspR9I	CCNGG	3 cut(s)	128, 346, 689
MssI	GTTTAAAC	1 cut(s)	817
MunI	CAATTG	1 cut(s)	513
Mva1269I	GAATGC	1 cut(s)	607
MvaI	CCWGG	1 cut(s)	128
MvnI	CGCG	7 cut(s)	152, 159, 200, 449, 465, 1160, 1558
MwoI	GCNNNNNNNGC	7 cut(s)	112, 146, 149, 158, 739, 851, 874
NciI	CCSGG	2 cut(s)	346, 689
NcoI	CCATGG	1 cut(s)	1474
NdeII	GATC	4 cut(s)	163, 780, 1168, 1561
NheI	GCTAGC	1 cut(s)	1573
NlaIII	CATG	3 cut(s)	1291, 1379, 1478
NlaIV	GGNNCC	1 cut(s)	320
NmuCI	GTSAC	3 cut(s)	216, 403, 858
NsbI	TGCGCA	1 cut(s)	327
NspV	TTCGAA	1 cut(s)	1116
PaeR7I	CTCGAG	1 cut(s)	107
PaqCI	CACCTGC	1 cut(s)	523
PceI	AGGCCT	1 cut(s)	1276
PciSI	GCTCTTC	1 cut(s)	1520
PctI	GAATGC	1 cut(s)	607
PdmI	GAANNNNTTC	1 cut(s)	383
PfeI	GAWTC	3 cut(s)	14, 702, 1448
PflMI	CCANNNNNTGG	1 cut(s)	238
PleI	GAGTC	4 cut(s)	67, 475, 717, 1135
PmaCI	CACGTG	1 cut(s)	1412
PmeI	GTTTAAAC	1 cut(s)	817
PmlI	CACGTG	1 cut(s)	1412
PpsI	GAGTC	4 cut(s)	67, 475, 717, 1135
Ppu21I	YACGTR	2 cut(s)	829, 1412
PshAI	GACNNNNGTC	2 cut(s)	269, 900
PsiI	TTATAA	1 cut(s)	1218
Psp124BI	GAGCTC	2 cut(s)	36, 280
Psp6I	CCWGG	1 cut(s)	126
PspCI	CACGTG	1 cut(s)	1412
PspGI	CCWGG	1 cut(s)	126
PspN4I	GGNNCC	1 cut(s)	320
PspPI	GGNCC	4 cut(s)	187, 298, 319, 1210
PvuII	CAGCTG	1 cut(s)	1094
RsaI	GTAC	7 cut(s)	170, 446, 560, 663, 1098, 1130, 1380
RsaNI	GTAC	7 cut(s)	169, 445, 559, 662, 1097, 1129, 1379
RseI	CAYNNNNRTG	1 cut(s)	963
SacI	GAGCTC	2 cut(s)	36, 280
SacII	CCGCGG	1 cut(s)	153
SalI	GTCGAC	1 cut(s)	248
SapI	GCTCTTC	1 cut(s)	1520
SaqAI	TTAA	3 cut(s)	816, 1032, 1124
Sau3AI	GATC	4 cut(s)	163, 780, 1168, 1561
Sau96I	GGNCC	4 cut(s)	187, 298, 319, 1210
ScaI	AGTACT	3 cut(s)	170, 663, 1130
SchI	GAGTC	4 cut(s)	68, 476, 718, 1135
ScrFI	CCNGG	3 cut(s)	128, 346, 689
SduI	GDGCHC	4 cut(s)	36, 280, 1366, 1468
SfaNI	GCATC	2 cut(s)	967, 1500
Sfr274I	CTCGAG	1 cut(s)	107
Sfr303I	CCGCGG	1 cut(s)	153
SfuI	TTCGAA	1 cut(s)	1116
SgrBI	CCGCGG	1 cut(s)	153
SinI	GGWCC	2 cut(s)	187, 298
SlaI	CTCGAG	1 cut(s)	107
SmiMI	CAYNNNNRTG	1 cut(s)	963
SmlI	CTYRAG	1 cut(s)	107
SmoI	CTYRAG	1 cut(s)	107
Sse9I	AATT	6 cut(s)	513, 594, 1072, 1318, 1385, 1416
SseBI	AGGCCT	1 cut(s)	1276
SspMI	CTAG	1 cut(s)	1574
SstI	GAGCTC	2 cut(s)	36, 280
StuI	AGGCCT	1 cut(s)	1276
StyD4I	CCNGG	3 cut(s)	126, 344, 687
StyI	CCWWGG	1 cut(s)	1474
TaaI	ACNGT	3 cut(s)	391, 409, 563
TaiI	ACGT	9 cut(s)	121, 216, 255, 831, 1150, 1332, 1372, 1402, 1414
TasI	AATT	6 cut(s)	513, 594, 1072, 1318, 1385, 1416
TatI	WGTACW	4 cut(s)	168, 558, 661, 1128
TauI	GCSGC	7 cut(s)	101, 126, 152, 155, 200, 465, 683
TfiI	GAWTC	3 cut(s)	14, 702, 1448
Tru1I	TTAA	3 cut(s)	816, 1032, 1124
Tru9I	TTAA	3 cut(s)	816, 1032, 1124
TscAI	CASTG	3 cut(s)	401, 979, 1240
TseFI	GTSAC	3 cut(s)	216, 403, 858
TseI	GCWGC	8 cut(s)	83, 140, 176, 575, 605, 865, 1091, 1268
Tsp45I	GTSAC	3 cut(s)	216, 403, 858
TspDTI	ATGAA	1 cut(s)	1324
TspGWI	ACGGA	2 cut(s)	281, 1251
TspRI	CASTG	3 cut(s)	401, 979, 1240
Van91I	CCANNNNNTGG	1 cut(s)	238
VneI	GTGCAC	2 cut(s)	1362, 1464
VpaK11BI	GGWCC	2 cut(s)	187, 298
XcmI	CCANNNNNNNNNTGG	2 cut(s)	713, 1481
XhoI	CTCGAG	1 cut(s)	107
XmiI	GTMKAC	1 cut(s)	249
XmnI	GAANNNNTTC	1 cut(s)	383
XspI	CTAG	1 cut(s)	1574
ZraI	GACGTC	2 cut(s)	253, 1330
ZrmI	AGTACT	3 cut(s)	170, 663, 1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.