RLG00000022868

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
13765260 .. 13769809
4550 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022868

Sequence Viewer

Length: 1371 bp
ATGTGGACTGAGGTGGGATTGTGTTTAGTAGCGTTTCTGGTGATATACATCACCCACTGGATTATGAAATGGAGGAACCCAAAGTGCAATGGGGTTCTTCCTCCAGGTTCAATGGGTTTGCCTCTCATCGGTGAGACCCTCAGTTTCATCATTCCAAGCTACTCCCTAGATCTTCACCCTTTCATAAAGAAAAGACTTGAAAGATATGGACCTATATTTCGGACTAGTTTGGCAGGTAGGCCAGTTGTGATTTCAGCTGATCCTGAATTCAATAACTTCCTTTTTCAGCAAGAAGGGAGGTCTATAAACGCAGTTGGCGTCATTCACAAATACGTAAGGAGCACTTTCTTGAATCACTTTGGTGCTGAGAGGCTTAAGGAAAAGTTGCTCCCTAAAATACAAGAATTCGTCAACAAAAGTTTATGTTCTTGGTCAAGTCAAGAATCTGTTGAAGTGAAACATGCTGGCTCAGTTATGGTTCTTAATTTTAGTGCAAAGCAGATGATTAGTTATAATGTTGAAAAAGCTATTGATGACCTGAGTGAGAAATATACTAAAATAATAGATGGTCTTATGTCGTTTCCCTTGAATATCCCTGGGACTGCATACTATAACTGTACCAAGCACCAAAAGAAGGTAGTGACCATGTTGAGGGATATGCTCAAGGAGAGACACGATTCGCCTGAGACCCAACATGGGGATTTCCTTGATCAAATTGCAAATGACATGGACAAGGAGAAGTTTTTATCAGAGGATTTTATTGTTCACTTGTTATTTGCGGGCTTATTCGCTTCCTTTGAATCTATTTCAGCAGTGTTGGCATTAGCCTTCAGTTTACTTGCAGAGCATCCTTCAGTCTTACAAGAGTTGACTGCTGAGCATGAAGCTATTCTCAAAAACAGAGAAGATCCAAATACTTCACTCACATGGGATGAATATAAAGCGATGACTTTTACTCTTAAGGTTATCAACGAAACTCTTAGGTTGGGTAATGTTGCACCCGGCTTGTTGCGTAGAGCTTTGAGGGACATCCCAGTAAAGGGATTTACAATCCCAAAAGGTTGGACAATTATGGTAGTCACGTCTGCGCTTCAGTTAAATCCCAACACATTCGAGGATCCTATTAAGTTCAATCCATGGCGTTGGAAGGACATTGACTCATACTCTATATCCAAGAATTTCATGCCTTTTGGTGGAGGAATGAGACAATGTGCTGGGGCAGAGTATAGTAGAGTTTTCTTGTCTACATTTTTCCATGTCTTGGTCACCAAATATAGGTGGACAACAATCAAAGGAGCACGGATTGCTCGAAATCCCATTTTAGGGTTTGGTGATGGCATTCACATTAAGTTCTCAGAAAAGAAAAAATGA

Protein Analysis

457

Amino Acids

51.94

Weight (kDa)

9.1

Isoelectric Point (pI)

33.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 113 - 434 4e-48 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 513
Acc36I ACCTGC 1 cut(s) 224
AccB7I CCANNNNNTGG 1 cut(s) 1261
AccI GTMKAC 1 cut(s) 1244
AciI CCGC 1 cut(s) 779
AclWI GGATC 4 cut(s) 254, 902, 1112, 1125
AcsI RAATTY 3 cut(s) 266, 404, 1177
AcuI CTGAAG 3 cut(s) 814, 837, 1076
AcyI GRCGYC 1 cut(s) 318
AfaI GTAC 1 cut(s) 619
AflII CTTAAG 2 cut(s) 374, 959
AgsI TTSAA 9 cut(s) 111, 200, 271, 352, 452, 521, 589, 800, 1132
AhlI ACTAGT 1 cut(s) 224
AjiI CACGTC 1 cut(s) 1083
AjnI CCWGG 2 cut(s) 103, 595
AleI CACNNNNGTG 1 cut(s) 360
AluBI AGCT 5 cut(s) 159, 257, 527, 887, 1019
AluI AGCT 5 cut(s) 159, 257, 527, 887, 1019
Alw21I GWGCWC 2 cut(s) 344, 1300
Alw26I GTCTC 4 cut(s) 128, 664, 680, 1198
AlwI GGATC 4 cut(s) 254, 902, 1112, 1125
AoxI GGCC 1 cut(s) 239
ApoI RAATTY 3 cut(s) 266, 404, 1177
ArsI GACNNNNNNTTYG 2 cut(s) 201, 233
Asp700I GAANNNNTTC 1 cut(s) 888
AspLEI GCGC 1 cut(s) 1090
AspS9I GGNCC 1 cut(s) 209
AsuC2I CCSGG 1 cut(s) 1002
AsuHPI GGTGA 6 cut(s) 43, 52, 143, 167, 1258, 1343
AvaII GGWCC 1 cut(s) 209
BamHI GGATCC 1 cut(s) 1117
Bbv12I GWGCWC 2 cut(s) 344, 1300
BccI CCATC 2 cut(s) 560, 1328
BciT130I CCWGG 2 cut(s) 105, 597
BclI TGATCA 1 cut(s) 709
BcnI CCSGG 1 cut(s) 1002
BcoDI GTCTC 4 cut(s) 128, 664, 680, 1198
BcuI ACTAGT 1 cut(s) 224
BfaI CTAG 2 cut(s) 167, 225
BfrI CTTAAG 2 cut(s) 374, 959
BfuAI ACCTGC 1 cut(s) 224
BglII AGATCT 1 cut(s) 169
BlpI GCTNAGC 1 cut(s) 876
Bme1390I CCNGG 3 cut(s) 105, 597, 1002
Bme18I GGWCC 1 cut(s) 209
BmgBI CACGTC 1 cut(s) 1083
BmgT120I GGNCC 1 cut(s) 209
BmiI GGNNCC 2 cut(s) 77, 1119
BmrFI CCNGG 3 cut(s) 105, 597, 1002
BmrI ACTGGG 1 cut(s) 1028
BmsI GCATC 1 cut(s) 856
BmuI ACTGGG 1 cut(s) 1028
BpmI CTGGAG 1 cut(s) 87
Bpu1102I GCTNAGC 1 cut(s) 876
BpuEI CTTGAG 1 cut(s) 647
BpuMI CCSGG 1 cut(s) 1002
BsaAI YACGTR 1 cut(s) 334
BsaBI GATNNNNATC 1 cut(s) 47
BsaHI GRCGYC 1 cut(s) 318
BsaI GGTCTC 2 cut(s) 128, 680
BsaJI CCNNGG 3 cut(s) 595, 596, 1136
Bse1I ACTGG 3 cut(s) 62, 242, 1034
Bse3DI GCAATG 1 cut(s) 94
Bse8I GATNNNNATC 1 cut(s) 47
BseBI CCWGG 2 cut(s) 105, 597
BseDI CCNNGG 3 cut(s) 595, 596, 1136
BseGI GGATG 3 cut(s) 847, 937, 1029
BseJI GATNNNNATC 1 cut(s) 47
BseMI GCAATG 1 cut(s) 94
BseMII CTCAG 7 cut(s) 154, 357, 483, 530, 675, 867, 1368
BseNI ACTGG 3 cut(s) 62, 242, 1034
BseYI CCCAGC 1 cut(s) 1214
BshFI GGCC 1 cut(s) 241
BsiHKAI GWGCWC 2 cut(s) 344, 1300
BsiSI CCGG 1 cut(s) 1002
BslFI GGGAC 2 cut(s) 613, 1040
BsmAI GTCTC 4 cut(s) 128, 664, 680, 1198
BsmFI GGGAC 2 cut(s) 613, 1040
BsmI GAATGC 1 cut(s) 1338
BsnI GGCC 1 cut(s) 241
Bso31I GGTCTC 2 cut(s) 128, 680
Bsp1286I GDGCHC 2 cut(s) 344, 1300
Bsp143I GATC 5 cut(s) 169, 259, 709, 907, 1117
Bsp1720I GCTNAGC 1 cut(s) 876
Bsp19I CCATGG 1 cut(s) 1136
BspACI CCGC 1 cut(s) 779
BspANI GGCC 1 cut(s) 241
BspCNI CTCAG 7 cut(s) 153, 358, 482, 531, 676, 868, 1367
BspLI GGNNCC 2 cut(s) 77, 1119
BspMI ACCTGC 1 cut(s) 224
BspPI GGATC 4 cut(s) 254, 902, 1112, 1125
BspTI CTTAAG 2 cut(s) 374, 959
BspTNI GGTCTC 2 cut(s) 128, 680
BsrDI GCAATG 1 cut(s) 94
BsrI ACTGG 3 cut(s) 62, 242, 1034
BssECI CCNNGG 3 cut(s) 595, 596, 1136
BssMI GATC 5 cut(s) 169, 259, 709, 907, 1117
BssNI GRCGYC 1 cut(s) 318
BssT1I CCWWGG 1 cut(s) 1136
Bst2UI CCWGG 2 cut(s) 105, 597
Bst4CI ACNGT 1 cut(s) 617
BstACI GRCGYC 1 cut(s) 318
BstAFI CTTAAG 2 cut(s) 374, 959
BstAPI GCANNNNNTGC 1 cut(s) 1304
BstBAI YACGTR 1 cut(s) 334
BstC8I GCNNGC 2 cut(s) 466, 781
BstDEI CTNAG 9 cut(s) 9, 140, 366, 469, 539, 684, 876, 980, 1354
BstDSI CCRYGG 1 cut(s) 1136
BstEII GGTNACC 1 cut(s) 1264
BstF5I GGATG 3 cut(s) 847, 937, 1029
BstHHI GCGC 1 cut(s) 1090
BstKTI GATC 5 cut(s) 172, 262, 712, 910, 1120
BstMAI GTCTC 4 cut(s) 128, 664, 680, 1198
BstMBI GATC 5 cut(s) 169, 259, 709, 907, 1117
BstMWI GCNNNNNNNGC 2 cut(s) 818, 1304
BstNI CCWGG 2 cut(s) 105, 597
BstNSI RCATGY 1 cut(s) 464
BstPI GGTNACC 1 cut(s) 1264
BstSCI CCNGG 3 cut(s) 103, 595, 1000
BstSNI TACGTA 1 cut(s) 334
BstX2I RGATCY 3 cut(s) 169, 907, 1117
BstXI CCANNNNNNTGG 2 cut(s) 1062, 1143
BstYI RGATCY 3 cut(s) 169, 907, 1117
BsuRI GGCC 1 cut(s) 241
BtgI CCRYGG 1 cut(s) 1136
BtgZI GCGATG 1 cut(s) 959
BtrI CACGTC 1 cut(s) 1083
BtsCI GGATG 3 cut(s) 847, 937, 1029
BtsI GCAGTG 1 cut(s) 819
BtsIMutI CAGTG 2 cut(s) 55, 819
BveI ACCTGC 1 cut(s) 224
Cac8I GCNNGC 2 cut(s) 466, 781
CfoI GCGC 1 cut(s) 1090
Cfr13I GGNCC 1 cut(s) 209
CseI GACGC 1 cut(s) 307
Csp6I GTAC 1 cut(s) 618
CviAII CATG 9 cut(s) 461, 646, 695, 727, 881, 927, 1137, 1183, 1256
CviQI GTAC 1 cut(s) 618
DdeI CTNAG 9 cut(s) 9, 140, 366, 469, 539, 684, 876, 980, 1354
DpnI GATC 5 cut(s) 171, 261, 711, 909, 1119
DpnII GATC 5 cut(s) 169, 259, 709, 907, 1117
Eco105I TACGTA 1 cut(s) 334
Eco130I CCWWGG 1 cut(s) 1136
Eco31I GGTCTC 2 cut(s) 128, 680
Eco47I GGWCC 1 cut(s) 209
Eco57I CTGAAG 3 cut(s) 814, 837, 1076
Eco91I GGTNACC 1 cut(s) 1264
EcoO65I GGTNACC 1 cut(s) 1264
EcoRI GAATTC 2 cut(s) 266, 404
EcoRII CCWGG 2 cut(s) 103, 595
EcoT14I CCWWGG 1 cut(s) 1136
ErhI CCWWGG 1 cut(s) 1136
FaeI CATG 9 cut(s) 464, 649, 698, 730, 884, 930, 1140, 1186, 1259
FalI AAGNNNNNCTT 2 cut(s) 328, 360
FaqI GGGAC 2 cut(s) 613, 1040
FatI CATG 9 cut(s) 460, 645, 694, 726, 880, 926, 1136, 1182, 1255
FauI CCCGC 1 cut(s) 772
FbaI TGATCA 1 cut(s) 709
FblI GTMKAC 1 cut(s) 1244
FokI GGATG 3 cut(s) 834, 944, 1016
FspBI CTAG 2 cut(s) 167, 225
GlaI GCGC 1 cut(s) 1089
GsaI CCCAGC 1 cut(s) 1218
GsuI CTGGAG 1 cut(s) 87
HaeIII GGCC 1 cut(s) 241
HapII CCGG 1 cut(s) 1002
HgaI GACGC 1 cut(s) 307
HhaI GCGC 1 cut(s) 1090
Hin1I GRCGYC 1 cut(s) 318
Hin1II CATG 9 cut(s) 464, 649, 698, 730, 884, 930, 1140, 1186, 1259
Hin6I GCGC 1 cut(s) 1088
HinP1I GCGC 1 cut(s) 1088
HincII GTYRAC 2 cut(s) 412, 870
HindII GTYRAC 2 cut(s) 412, 870
HinfI GANTC 5 cut(s) 352, 443, 677, 800, 1157
HpaII CCGG 1 cut(s) 1002
HphI GGTGA 6 cut(s) 43, 52, 143, 167, 1258, 1343
Hpy166II GTNNAC 7 cut(s) 6, 412, 766, 836, 870, 1245, 1281
Hpy188I TCNGA 3 cut(s) 222, 751, 1357
Hpy188III TCNNGA 3 cut(s) 263, 349, 440
Hpy8I GTNNAC 7 cut(s) 6, 412, 766, 836, 870, 1245, 1281
HpyAV CCTTC 5 cut(s) 287, 628, 838, 861, 1141
HpyCH4III ACNGT 1 cut(s) 617
HpyCH4IV ACGT 2 cut(s) 333, 1082
HpyCH4V TGCA 6 cut(s) 87, 494, 605, 719, 842, 998
HpyF10VI GCNNNNNNNGC 2 cut(s) 818, 1304
HpyF3I CTNAG 9 cut(s) 9, 140, 366, 469, 539, 684, 876, 980, 1354
HpySE526I ACGT 2 cut(s) 333, 1082
Hsp92I GRCGYC 1 cut(s) 318
Hsp92II CATG 9 cut(s) 464, 649, 698, 730, 884, 930, 1140, 1186, 1259
HspAI GCGC 1 cut(s) 1088
Ksp22I TGATCA 1 cut(s) 709
Kzo9I GATC 5 cut(s) 169, 259, 709, 907, 1117
LmnI GCTCC 3 cut(s) 339, 393, 1295
LweI GCATC 1 cut(s) 856
MaeI CTAG 2 cut(s) 167, 225
MaeII ACGT 2 cut(s) 333, 1082
MaeIII GTNAC 3 cut(s) 640, 1078, 1264
MalI GATC 5 cut(s) 171, 261, 711, 909, 1119
MboI GATC 5 cut(s) 169, 259, 709, 907, 1117
MboII GAAGA 3 cut(s) 89, 164, 917
MflI RGATCY 3 cut(s) 169, 907, 1117
MhlI GDGCHC 2 cut(s) 344, 1300
MluCI AATT 6 cut(s) 266, 404, 484, 714, 1068, 1177
MlyI GAGTC 1 cut(s) 1151
MmeI TCCRAC 2 cut(s) 1043, 1124
MroXI GAANNNNTTC 1 cut(s) 888
MseI TTAA 6 cut(s) 375, 483, 960, 1097, 1125, 1347
MslI CAYNNNNRTG 2 cut(s) 360, 925
MspA1I CMGCKG 1 cut(s) 257
MspCI CTTAAG 2 cut(s) 374, 959
MspI CCGG 1 cut(s) 1002
MspR9I CCNGG 3 cut(s) 105, 597, 1002
Mva1269I GAATGC 1 cut(s) 1338
MvaI CCWGG 2 cut(s) 105, 597
MwoI GCNNNNNNNGC 2 cut(s) 818, 1304
NciI CCSGG 1 cut(s) 1002
NcoI CCATGG 1 cut(s) 1136
NdeII GATC 5 cut(s) 169, 259, 709, 907, 1117
NlaIII CATG 9 cut(s) 464, 649, 698, 730, 884, 930, 1140, 1186, 1259
NlaIV GGNNCC 2 cut(s) 77, 1119
NmuCI GTSAC 3 cut(s) 640, 1078, 1264
NspI RCATGY 1 cut(s) 464
OliI CACNNNNGTG 1 cut(s) 360
PasI CCCWGGG 1 cut(s) 596
PcsI WCGNNNNNNNCGW 2 cut(s) 315, 1306
PctI GAATGC 1 cut(s) 1338
PdmI GAANNNNTTC 1 cut(s) 888
PfeI GAWTC 4 cut(s) 352, 443, 677, 800
PflMI CCANNNNNTGG 1 cut(s) 1261
PleI GAGTC 1 cut(s) 1151
PpsI GAGTC 1 cut(s) 1151
Ppu21I YACGTR 1 cut(s) 334
PsiI TTATAA 1 cut(s) 513
Psp6I CCWGG 2 cut(s) 103, 595
PspEI GGTNACC 1 cut(s) 1264
PspFI CCCAGC 1 cut(s) 1214
PspGI CCWGG 2 cut(s) 103, 595
PspN4I GGNNCC 2 cut(s) 77, 1119
PspPI GGNCC 1 cut(s) 209
PsuI RGATCY 3 cut(s) 169, 907, 1117
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 1 cut(s) 619
RsaNI GTAC 1 cut(s) 618
RseI CAYNNNNRTG 2 cut(s) 360, 925
SaqAI TTAA 6 cut(s) 375, 483, 960, 1097, 1125, 1347
Sau3AI GATC 5 cut(s) 169, 259, 709, 907, 1117
Sau96I GGNCC 1 cut(s) 209
SchI GAGTC 1 cut(s) 1151
ScrFI CCNGG 3 cut(s) 105, 597, 1002
SduI GDGCHC 2 cut(s) 344, 1300
SfaNI GCATC 1 cut(s) 856
SinI GGWCC 1 cut(s) 209
SmiMI CAYNNNNRTG 2 cut(s) 360, 925
SmlI CTYRAG 3 cut(s) 374, 662, 959
SmoI CTYRAG 3 cut(s) 374, 662, 959
SnaBI TACGTA 1 cut(s) 334
SpeI ACTAGT 1 cut(s) 224
Sse9I AATT 6 cut(s) 266, 404, 484, 714, 1068, 1177
SsiI CCGC 1 cut(s) 779
SspMI CTAG 2 cut(s) 167, 225
StyD4I CCNGG 3 cut(s) 103, 595, 1000
StyI CCWWGG 1 cut(s) 1136
TaaI ACNGT 1 cut(s) 617
TaiI ACGT 2 cut(s) 336, 1085
TaqI TCGA 2 cut(s) 1113, 1309
TasI AATT 6 cut(s) 266, 404, 484, 714, 1068, 1177
TfiI GAWTC 4 cut(s) 352, 443, 677, 800
Tru1I TTAA 6 cut(s) 375, 483, 960, 1097, 1125, 1347
Tru9I TTAA 6 cut(s) 375, 483, 960, 1097, 1125, 1347
TscAI CASTG 2 cut(s) 62, 819
TseFI GTSAC 3 cut(s) 640, 1078, 1264
Tsp45I GTSAC 3 cut(s) 640, 1078, 1264
TspDTI ATGAA 6 cut(s) 80, 136, 172, 897, 948, 1171
TspGWI ACGGA 1 cut(s) 1315
TspRI CASTG 2 cut(s) 62, 819
Van91I CCANNNNNTGG 1 cut(s) 1261
Vha464I CTTAAG 2 cut(s) 374, 959
VpaK11BI GGWCC 1 cut(s) 209
XapI RAATTY 3 cut(s) 266, 404, 1177
XceI RCATGY 1 cut(s) 464
XmiI GTMKAC 1 cut(s) 1244
XmnI GAANNNNTTC 1 cut(s) 888
XspI CTAG 2 cut(s) 167, 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.