Rmu_ssc0000386.1_g000014

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000386.1
Physical Location & Seq
Forward (+)
55569 .. 59617
4049 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000386.1_g000014.1.cds

Sequence Viewer

Length: 1362 bp
atggctgaggaggatttcggagacggagactcggagagtggtgcaggagctgcatttctggtgatatacatcacccattggattatgaaatggaggaacccaaagtgcaatggggttcttcctccaggttcaatgggtttgcctctcatcggtgagaccctcagtttgatcattccaagctactccctagatcttcaccctttcataaagaaaagacttgaaagatatggacctatatttcgaacaagtttggcaggtaggccagttgtggtatcagctgatcctgaattcaataacttcctttttcagcaagaagggaggtctgttgagttgtggtacttggatacattttcaaagatcttcgtgatggaaggtgaatcaaaagtaaacgcagttggcattgttcacaaatacgtaaggagcactttattgaatcactttggtgctgagaggcttaaggaaaagttgctccctgaaatacaagaattcgtcaacaaaagtttatgttcttggtcaagtcaggaatctgttgaagtgaaacatgctggctcagttatgcttcttaattttagtgcaaagcagatgattagttataatgctgaaaaagctactgatgacctgagtgagaaatatactaaaatcatagatggtcttatgtcgtttcccttgaatatccctgggactgcatactataattgtaccaagcaccaaaagaaggtagagaccatgttgagggatatgctcaaggagagacatgatttgcctaagacccaacatggggatttgcttgatcaaattgcaaatgacatggacaaggagaagtttttatcagaggattttatcgttcacttgttatttgcgggcttatttgctacctttgaatctatttcagcagtgttggcattagccttcagtttacttgcagggcatccttcagtcttacaagagttgactgttatcaatgaaactcttcggttgggtaatgttgcacccggcttgttacgtagagctttgagagacatcccaataaagggatatacaatcccagaaggttggacgattatgattgtcacgtctgcgcttcagttaaatcccaacacattcgaggatccccttaagttcaatccatggcgttggaaggacattgactcacactctatatctaagaatttcatgccttttggtggaggaatgagacaatgtgctggggcagagtatagtagagttttcttgtctacatttttccatgtcttggtcaccaaatataggtggacaacaatcaaaggagcacggattgctcgaaatcccatgttagggtttggtgatggcattcacattaagttctcagaaaagaaaaagtga

Protein Analysis

453

Amino Acids

51.18

Weight (kDa)

8.17

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 594
Acc36I ACCTGC 1 cut(s) 245
AccB7I CCANNNNNTGG 1 cut(s) 1252
AccI GTMKAC 1 cut(s) 1235
AciI CCGC 1 cut(s) 860
AclWI GGATC 3 cut(s) 275, 1103, 1116
AcsI RAATTY 3 cut(s) 287, 485, 1168
AcuI CTGAAG 3 cut(s) 895, 918, 1067
AfaI GTAC 2 cut(s) 338, 700
AflII CTTAAG 2 cut(s) 455, 1115
AgsI TTSAA 9 cut(s) 132, 221, 292, 354, 433, 533, 670, 881, 1123
AjiI CACGTC 1 cut(s) 1074
AjnI CCWGG 2 cut(s) 124, 676
AleI CACNNNNGTG 1 cut(s) 441
AluBI AGCT 5 cut(s) 50, 180, 278, 608, 1010
AluI AGCT 5 cut(s) 50, 180, 278, 608, 1010
Alw21I GWGCWC 2 cut(s) 425, 1291
Alw26I GTCTC 7 cut(s) 15, 21, 149, 716, 745, 1011, 1189
AlwI GGATC 3 cut(s) 275, 1103, 1116
AlwNI CAGNNNCTG 1 cut(s) 50
AoxI GGCC 1 cut(s) 260
ApeKI GCWGC 1 cut(s) 50
ApoI RAATTY 3 cut(s) 287, 485, 1168
ArsI GACNNNNNNTTYG 4 cut(s) 148, 180, 222, 254
Asp700I GAANNNNTTC 1 cut(s) 969
AspLEI GCGC 1 cut(s) 1081
AspS9I GGNCC 1 cut(s) 230
AsuC2I CCSGG 1 cut(s) 993
AsuHPI GGTGA 7 cut(s) 64, 73, 164, 188, 386, 1249, 1334
AsuII TTCGAA 1 cut(s) 241
AvaII GGWCC 1 cut(s) 230
BamHI GGATCC 1 cut(s) 1108
Bbv12I GWGCWC 2 cut(s) 425, 1291
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 1 cut(s) 37
BccI CCATC 3 cut(s) 361, 641, 1319
BciT130I CCWGG 2 cut(s) 126, 678
BciVI GTATCC 1 cut(s) 337
BclI TGATCA 2 cut(s) 168, 790
BcnI CCSGG 1 cut(s) 993
BcoDI GTCTC 7 cut(s) 15, 21, 149, 716, 745, 1011, 1189
BfaI CTAG 1 cut(s) 188
BfrI CTTAAG 2 cut(s) 455, 1115
BfuAI ACCTGC 1 cut(s) 245
BfuI GTATCC 1 cut(s) 337
BglII AGATCT 2 cut(s) 190, 357
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
Bme1390I CCNGG 3 cut(s) 126, 678, 993
Bme18I GGWCC 1 cut(s) 230
BmgBI CACGTC 1 cut(s) 1074
BmgT120I GGNCC 1 cut(s) 230
BmiI GGNNCC 2 cut(s) 98, 1110
BmrFI CCNGG 3 cut(s) 126, 678, 993
BmsI GCATC 1 cut(s) 937
BpmI CTGGAG 1 cut(s) 108
Bpu10I CCTNAGC 1 cut(s) 6
Bpu14I TTCGAA 1 cut(s) 241
BpuEI CTTGAG 1 cut(s) 728
BpuMI CCSGG 1 cut(s) 993
BsaAI YACGTR 2 cut(s) 415, 1004
BsaBI GATNNNNATC 1 cut(s) 68
BsaI GGTCTC 2 cut(s) 149, 716
BsaJI CCNNGG 3 cut(s) 676, 677, 1127
Bse1I ACTGG 1 cut(s) 263
Bse3DI GCAATG 1 cut(s) 115
Bse8I GATNNNNATC 1 cut(s) 68
BseBI CCWGG 2 cut(s) 126, 678
BseDI CCNNGG 3 cut(s) 676, 677, 1127
BseGI GGATG 2 cut(s) 928, 1020
BseJI GATNNNNATC 1 cut(s) 68
BseMI GCAATG 1 cut(s) 115
BseMII CTCAG 5 cut(s) 175, 438, 564, 611, 1359
BseNI ACTGG 1 cut(s) 263
BseRI GAGGAG 1 cut(s) 23
BseXI GCAGC 1 cut(s) 37
BseYI CCCAGC 1 cut(s) 1205
BsgI GTGCAG 1 cut(s) 63
BshFI GGCC 1 cut(s) 262
BsiHKAI GWGCWC 2 cut(s) 425, 1291
BsiSI CCGG 1 cut(s) 993
BslFI GGGAC 1 cut(s) 694
BsmAI GTCTC 7 cut(s) 15, 21, 149, 716, 745, 1011, 1189
BsmBI CGTCTC 1 cut(s) 15
BsmFI GGGAC 1 cut(s) 694
BsmI GAATGC 1 cut(s) 1329
BsnI GGCC 1 cut(s) 262
Bso31I GGTCTC 2 cut(s) 149, 716
Bsp119I TTCGAA 1 cut(s) 241
Bsp1286I GDGCHC 2 cut(s) 425, 1291
Bsp143I GATC 6 cut(s) 168, 190, 280, 357, 790, 1108
Bsp19I CCATGG 1 cut(s) 1127
BspACI CCGC 1 cut(s) 860
BspANI GGCC 1 cut(s) 262
BspCNI CTCAG 5 cut(s) 174, 439, 563, 612, 1358
BspLI GGNNCC 2 cut(s) 98, 1110
BspMI ACCTGC 1 cut(s) 245
BspPI GGATC 3 cut(s) 275, 1103, 1116
BspT104I TTCGAA 1 cut(s) 241
BspTI CTTAAG 2 cut(s) 455, 1115
BspTNI GGTCTC 2 cut(s) 149, 716
BsrDI GCAATG 1 cut(s) 115
BsrI ACTGG 1 cut(s) 263
BssECI CCNNGG 3 cut(s) 676, 677, 1127
BssMI GATC 6 cut(s) 168, 190, 280, 357, 790, 1108
BssT1I CCWWGG 1 cut(s) 1127
Bst2UI CCWGG 2 cut(s) 126, 678
Bst4CI ACNGT 1 cut(s) 955
Bst6I CTCTTC 1 cut(s) 975
BstAFI CTTAAG 2 cut(s) 455, 1115
BstAPI GCANNNNNTGC 2 cut(s) 50, 1295
BstBAI YACGTR 2 cut(s) 415, 1004
BstBI TTCGAA 1 cut(s) 241
BstC8I GCNNGC 2 cut(s) 547, 862
BstDEI CTNAG 8 cut(s) 6, 161, 447, 550, 620, 765, 1164, 1345
BstDSI CCRYGG 1 cut(s) 1127
BstEII GGTNACC 1 cut(s) 1255
BstF5I GGATG 2 cut(s) 928, 1020
BstHHI GCGC 1 cut(s) 1081
BstKTI GATC 6 cut(s) 171, 193, 283, 360, 793, 1111
BstMAI GTCTC 7 cut(s) 15, 21, 149, 716, 745, 1011, 1189
BstMBI GATC 6 cut(s) 168, 190, 280, 357, 790, 1108
BstMWI GCNNNNNNNGC 4 cut(s) 50, 605, 899, 1295
BstNI CCWGG 2 cut(s) 126, 678
BstNSI RCATGY 1 cut(s) 545
BstPI GGTNACC 1 cut(s) 1255
BstSCI CCNGG 3 cut(s) 124, 676, 991
BstSNI TACGTA 2 cut(s) 415, 1004
BstV1I GCAGC 1 cut(s) 37
BstX2I RGATCY 3 cut(s) 190, 357, 1108
BstXI CCANNNNNNTGG 2 cut(s) 1053, 1134
BstYI RGATCY 3 cut(s) 190, 357, 1108
BsuI GTATCC 1 cut(s) 337
BsuRI GGCC 1 cut(s) 262
BtgI CCRYGG 1 cut(s) 1127
BtrI CACGTC 1 cut(s) 1074
BtsCI GGATG 2 cut(s) 928, 1020
BtsI GCAGTG 1 cut(s) 900
BtsIMutI CAGTG 1 cut(s) 900
BveI ACCTGC 1 cut(s) 245
Cac8I GCNNGC 2 cut(s) 547, 862
CaiI CAGNNNCTG 1 cut(s) 50
CfoI GCGC 1 cut(s) 1081
Cfr13I GGNCC 1 cut(s) 230
Csp6I GTAC 2 cut(s) 337, 699
CviAII CATG 9 cut(s) 542, 727, 755, 776, 808, 1128, 1174, 1247, 1309
CviQI GTAC 2 cut(s) 337, 699
DdeI CTNAG 8 cut(s) 6, 161, 447, 550, 620, 765, 1164, 1345
DpnI GATC 6 cut(s) 170, 192, 282, 359, 792, 1110
DpnII GATC 6 cut(s) 168, 190, 280, 357, 790, 1108
Eam1104I CTCTTC 1 cut(s) 975
EarI CTCTTC 1 cut(s) 975
Eco105I TACGTA 2 cut(s) 415, 1004
Eco130I CCWWGG 1 cut(s) 1127
Eco31I GGTCTC 2 cut(s) 149, 716
Eco47I GGWCC 1 cut(s) 230
Eco57I CTGAAG 3 cut(s) 895, 918, 1067
Eco91I GGTNACC 1 cut(s) 1255
EcoO65I GGTNACC 1 cut(s) 1255
EcoRI GAATTC 2 cut(s) 287, 485
EcoRII CCWGG 2 cut(s) 124, 676
EcoT14I CCWWGG 1 cut(s) 1127
ErhI CCWWGG 1 cut(s) 1127
Esp3I CGTCTC 1 cut(s) 15
FaeI CATG 9 cut(s) 545, 730, 758, 779, 811, 1131, 1177, 1250, 1312
FalI AAGNNNNNCTT 2 cut(s) 409, 441
FaqI GGGAC 1 cut(s) 694
FatI CATG 9 cut(s) 541, 726, 754, 775, 807, 1127, 1173, 1246, 1308
FauI CCCGC 1 cut(s) 853
FbaI TGATCA 2 cut(s) 168, 790
FblI GTMKAC 1 cut(s) 1235
Fnu4HI GCNGC 1 cut(s) 51
FokI GGATG 2 cut(s) 915, 1007
Fsp4HI GCNGC 1 cut(s) 51
FspBI CTAG 1 cut(s) 188
GlaI GCGC 1 cut(s) 1080
GluI GCNGC 1 cut(s) 51
GsaI CCCAGC 1 cut(s) 1209
GsuI CTGGAG 1 cut(s) 108
HaeIII GGCC 1 cut(s) 262
HapII CCGG 1 cut(s) 993
HhaI GCGC 1 cut(s) 1081
Hin1II CATG 9 cut(s) 545, 730, 758, 779, 811, 1131, 1177, 1250, 1312
Hin6I GCGC 1 cut(s) 1079
HinP1I GCGC 1 cut(s) 1079
HincII GTYRAC 2 cut(s) 493, 951
HindII GTYRAC 2 cut(s) 493, 951
HinfI GANTC 6 cut(s) 29, 377, 433, 524, 881, 1148
HpaII CCGG 1 cut(s) 993
HphI GGTGA 7 cut(s) 64, 73, 164, 188, 386, 1249, 1334
Hpy166II GTNNAC 8 cut(s) 388, 406, 493, 847, 917, 951, 1236, 1272
Hpy188I TCNGA 4 cut(s) 20, 34, 832, 1348
Hpy188III TCNNGA 3 cut(s) 284, 364, 521
Hpy8I GTNNAC 8 cut(s) 388, 406, 493, 847, 917, 951, 1236, 1272
HpyAV CCTTC 7 cut(s) 308, 365, 709, 919, 942, 1043, 1132
HpyCH4III ACNGT 1 cut(s) 955
HpyCH4IV ACGT 3 cut(s) 414, 1003, 1073
HpyCH4V TGCA 8 cut(s) 44, 53, 108, 575, 686, 800, 923, 989
HpyF10VI GCNNNNNNNGC 4 cut(s) 50, 605, 899, 1295
HpyF3I CTNAG 8 cut(s) 6, 161, 447, 550, 620, 765, 1164, 1345
HpySE526I ACGT 3 cut(s) 414, 1003, 1073
Hsp92II CATG 9 cut(s) 545, 730, 758, 779, 811, 1131, 1177, 1250, 1312
HspAI GCGC 1 cut(s) 1079
Ksp22I TGATCA 2 cut(s) 168, 790
Kzo9I GATC 6 cut(s) 168, 190, 280, 357, 790, 1108
LmnI GCTCC 4 cut(s) 47, 420, 474, 1286
Lsp1109I GCAGC 1 cut(s) 37
LweI GCATC 1 cut(s) 937
MaeI CTAG 1 cut(s) 188
MaeII ACGT 3 cut(s) 414, 1003, 1073
MaeIII GTNAC 3 cut(s) 999, 1069, 1255
MalI GATC 6 cut(s) 170, 192, 282, 359, 792, 1110
MboI GATC 6 cut(s) 168, 190, 280, 357, 790, 1108
MboII GAAGA 4 cut(s) 110, 185, 352, 962
MflI RGATCY 3 cut(s) 190, 357, 1108
MhlI GDGCHC 2 cut(s) 425, 1291
MluCI AATT 6 cut(s) 287, 485, 565, 694, 795, 1168
MlyI GAGTC 2 cut(s) 23, 1142
MmeI TCCRAC 2 cut(s) 1034, 1115
MroXI GAANNNNTTC 1 cut(s) 969
MseI TTAA 5 cut(s) 456, 564, 1088, 1116, 1338
MslI CAYNNNNRTG 1 cut(s) 441
MspA1I CMGCKG 1 cut(s) 278
MspCI CTTAAG 2 cut(s) 455, 1115
MspI CCGG 1 cut(s) 993
MspR9I CCNGG 3 cut(s) 126, 678, 993
Mva1269I GAATGC 1 cut(s) 1329
MvaI CCWGG 2 cut(s) 126, 678
MwoI GCNNNNNNNGC 4 cut(s) 50, 605, 899, 1295
NciI CCSGG 1 cut(s) 993
NcoI CCATGG 1 cut(s) 1127
NdeII GATC 6 cut(s) 168, 190, 280, 357, 790, 1108
NlaIII CATG 9 cut(s) 545, 730, 758, 779, 811, 1131, 1177, 1250, 1312
NlaIV GGNNCC 2 cut(s) 98, 1110
NmuCI GTSAC 2 cut(s) 1069, 1255
NspI RCATGY 1 cut(s) 545
NspV TTCGAA 1 cut(s) 241
OliI CACNNNNGTG 1 cut(s) 441
PasI CCCWGGG 1 cut(s) 677
PcsI WCGNNNNNNNCGW 1 cut(s) 1297
PctI GAATGC 1 cut(s) 1329
PdmI GAANNNNTTC 1 cut(s) 969
PfeI GAWTC 4 cut(s) 377, 433, 524, 881
PflMI CCANNNNNTGG 1 cut(s) 1252
PkrI GCNGC 1 cut(s) 52
PleI GAGTC 2 cut(s) 23, 1142
PpsI GAGTC 2 cut(s) 23, 1142
Ppu21I YACGTR 2 cut(s) 415, 1004
PsiI TTATAA 1 cut(s) 594
Psp6I CCWGG 2 cut(s) 124, 676
PspEI GGTNACC 1 cut(s) 1255
PspFI CCCAGC 1 cut(s) 1205
PspGI CCWGG 2 cut(s) 124, 676
PspN4I GGNNCC 2 cut(s) 98, 1110
PspPI GGNCC 1 cut(s) 230
PstNI CAGNNNCTG 1 cut(s) 50
PsuI RGATCY 3 cut(s) 190, 357, 1108
PvuII CAGCTG 1 cut(s) 278
RsaI GTAC 2 cut(s) 338, 700
RsaNI GTAC 2 cut(s) 337, 699
RseI CAYNNNNRTG 1 cut(s) 441
SaqAI TTAA 5 cut(s) 456, 564, 1088, 1116, 1338
SatI GCNGC 1 cut(s) 51
Sau3AI GATC 6 cut(s) 168, 190, 280, 357, 790, 1108
Sau96I GGNCC 1 cut(s) 230
SchI GAGTC 2 cut(s) 23, 1142
ScrFI CCNGG 3 cut(s) 126, 678, 993
SduI GDGCHC 2 cut(s) 425, 1291
SfaNI GCATC 1 cut(s) 937
SfuI TTCGAA 1 cut(s) 241
SinI GGWCC 1 cut(s) 230
SmiMI CAYNNNNRTG 1 cut(s) 441
SmlI CTYRAG 3 cut(s) 455, 743, 1115
SmoI CTYRAG 3 cut(s) 455, 743, 1115
SnaBI TACGTA 2 cut(s) 415, 1004
Sse9I AATT 6 cut(s) 287, 485, 565, 694, 795, 1168
SsiI CCGC 1 cut(s) 860
SspMI CTAG 1 cut(s) 188
StyD4I CCNGG 3 cut(s) 124, 676, 991
StyI CCWWGG 1 cut(s) 1127
TaaI ACNGT 1 cut(s) 955
TaiI ACGT 3 cut(s) 417, 1006, 1076
TaqI TCGA 3 cut(s) 241, 1104, 1300
TasI AATT 6 cut(s) 287, 485, 565, 694, 795, 1168
TfiI GAWTC 4 cut(s) 377, 433, 524, 881
Tru1I TTAA 5 cut(s) 456, 564, 1088, 1116, 1338
Tru9I TTAA 5 cut(s) 456, 564, 1088, 1116, 1338
TscAI CASTG 1 cut(s) 900
TseFI GTSAC 2 cut(s) 1069, 1255
TseI GCWGC 1 cut(s) 50
Tsp45I GTSAC 2 cut(s) 1069, 1255
TspDTI ATGAA 4 cut(s) 101, 193, 978, 1162
TspGWI ACGGA 2 cut(s) 39, 1306
TspRI CASTG 1 cut(s) 900
Van91I CCANNNNNTGG 1 cut(s) 1252
Vha464I CTTAAG 2 cut(s) 455, 1115
VpaK11BI GGWCC 1 cut(s) 230
XapI RAATTY 3 cut(s) 287, 485, 1168
XceI RCATGY 1 cut(s) 545
XmiI GTMKAC 1 cut(s) 1235
XmnI GAANNNNTTC 1 cut(s) 969
XspI CTAG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.