Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001293

Physical Location & Seq

Genomic Coordinates Forward (+)

27468510 .. 27476503

Gene Structure 7994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00188020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGTGGAATGTTATGGGATTGAGTTTAGTAGCTCTGCTACTGATATATATCACTCACTGGATAGCCAAATGGAGGAACCCAAAATGCAATGGGGTTCTGCCTCCTGGTTCCATGGGCTTGCCTCTCATTGGAGAGACCTTAAGTTTGATCATTCCAAGCTACTCCCTAGATGTTCATCCGTTCATTAAGAAGAGACTTCAAAAATATGGGCCTATATTCCGGACTAGTTTGGCGGGTAGACCTGTCGTAATATCAGCTGATCCTGAGTTCAATAACTACATATTTCAGCAAGAAGGCAAGTCTGTTGAACTATGGTACATGGATACAATATCAAAAGTCTTTGTAGGCGATACCAAGGCAAATGCAACTGGCGTCATCCACAAGTACATAAGGAGCACATTCATGAAACACTTCGGTGCTGAGAACCTCAAGGAAAAGTTGCTCCCTCAAATGGAGGATTGCGTCAACAAAACTCTTCATTCGTGGTCTAGTAGGGCTTCTGTTGAAGTGAAGCATGCTGCCTCAGTTGATGACAAACAAAAAATTGATATTGAAAGACTCCCGAGACTCCCAAATGGACAGGAAGAGACTCCAAGGAGGTTGATTGTCAAAAGAGCTAGAGTAAAAGCGTTGGTGAAGGATAAGCAAGCTGCACTTGAAGCATTTGGAACTTATGTTGAGTCATTGACTGGAGATTCAAGGGACAAGCCATTCCTAAGGAAAGCTCTGAGAGGAGTTTCCACAGTAATATGCCCAAATGCAAAGGTTACTGTTGTTAATGGTGAGATACCAATGGTTGAGCAGGTTTCTGTGTTTTTCCCGAGAACTATATGCAAAAGACTCAACAGAGGATTGAGCACAGTGTTAGCTCACTCTTGGATAAAGATGGTTTTGAATTTTAGTGCAAAGCAGATGATCAGTTATGATGCTGAAAAATCAACTGAGAATCTGAGTGAGAAATTTGCTGAAGTCATTGAAGGTCTTATGTCCTTTCCTTTGAATATTCCTGGTACTGGATACTACAAGTGTTTGAAGGGCCAAAAGAAGGTAACAACCATGCTAAGGGATATGCTAAAGGAGAGATGCAATTCACCCGAGACACACCGAGGAGATTTCATCGATCAATTATGCAATGACATGGAGAAAGAGAAGTTCTTGACAGAGGATTTTGGTGTCCTGTTGATATTTGGGGGCTTATTTGCTACCTTTGAGTCCATTTCAGCTGTGTTGACTTTAGCTTTTAGTCTGCTGGAACAACATCCCTCAGTCTTACAAGAGTTGACTGCTGAGCATGATGCAATTCTCAAAAATAGAGAGAATCCGAATTCTCCACTCACATGGGACGAATATAAATCCATGACTTTCACTCTTCAGGTTATCAACGAAACTCTCAGGCTGGGAAATGTTGCACCTGGCTTGTTACGCAGAGCTTTGAAAGATGTCACAATCAAAGGGTATACAATTCCGGAAGATTGGGCCATTATGGTTGTCCCCTCTGCTCTTTACTTGAGTCCCAAGTCATTCAAGGATCCCCTCGAGTTCAATCCATGGCGTTGGAAGGACCTTGATTCACTTGCTACATCAAAGATCTTCATGCCTTTTGGTGGAGGATTGAGGCAATGTGCTGGAGCAGAGTATAGTAGAGTGTTCTTGGCCACATTTCTGCATGTATTTGTCACCAAGTTTAGCTCGACAACAATCAAAGAAGCACGCGTTGCTCGTAATCCTATTTTAGCATTTGGCGATGGTATGCACATCAAGTTTTCAGGGAAGACAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016491 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044238 GO:0048856 GO:0048878 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

593

Amino Acids

66.87

Weight (kDa)

9.28

Isoelectric Point (pI)

37.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	34 - 167	1.1e-06	Cytochrome P450
p450	PF00067	314 - 570	1.9e-42	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001293)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16500 FvH4_2g16500
malus_domestica	MD05G1133200.v1.1 MD05G1133300.v1.1 MD05G1133400.v1.1 MD10G1138400.v1.1
prunus_persica	Prupe.8G177200_v2.0.a1 Prupe.8G177300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0490971 RchiOBHm_Chr6g0280371 RchiOBHm_Chr6g0280421 RchiOBHm_Chr6g0280441 RchiOBHm_Chr6g0280471 RchiOBHm_Chr6g0280481 RchiOBHm_Chr6g0280521
rosa_laevigata	RLG00000013058 RLG00000013063 RLG00000013064 RLG00000022868
rosa_multiflora	Rmu_co8277759.1_g000001 Rmu_sc0002754.1_g000040 Rmu_sc0004211.1_g000027 Rmu_sc0005585.1_g000006 Rmu_sc0015818.1_g000001 Rmu_ssc0000386.1_g000014
rosa_roxburghii	Rroxscaffold_7G00188020 Rroxscaffold_7G00188060
rosa_rugosa	Rorug06G0131600 Rorug06G0131700 Rorug06G0131800 Rorug06G0131800
rosa_samantha	Rh3AG295400 Rh3BG331700 Rh3CG328600 Rh3DG328800 Rh3DG328900 Rh3DG329200 Rh6AG243300 Rh6AG243600 Rh6AG243700 Rh6AG244200 Rh6BG245900 Rh6BG246100 Rh6BG246700 Rh6CG247500 Rh6CG247700 Rh6CG248100 Rh6DG238900 Rh6DG239100 Rh6DG239400 Rh6DG239500
rosa_wichuraiana	Rw3G026060 Rw6G021140 Rw6G021150 Rw6G021160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	793
AccI	GTMKAC	2 cut(s)	238, 1457
AccII	CGCG	1 cut(s)	1713
AccIII	TCCGGA	2 cut(s)	219, 1465
AciI	CCGC	1 cut(s)	233
AclWI	GGATC	3 cut(s)	254, 1523, 1536
AcoI	YGGCCR	1 cut(s)	1653
AcsI	RAATTY	3 cut(s)	895, 959, 1324
AcuI	CTGAAG	2 cut(s)	987, 1355
AcyI	GRCGYC	1 cut(s)	372
AfaI	GTAC	3 cut(s)	317, 386, 1012
AfiI	CCNNNNNNNGG	7 cut(s)	72, 128, 451, 1013, 1045, 1062, 1604
AflII	CTTAAG	1 cut(s)	139
AflIII	ACRYGT	1 cut(s)	1711
AhlI	ACTAGT	1 cut(s)	224
AjnI	CCWGG	3 cut(s)	103, 1006, 1411
AleI	CACNNNNGTG	1 cut(s)	414
Alw21I	GWGCWC	2 cut(s)	398, 860
Alw26I	GTCTC	5 cut(s)	128, 187, 559, 581, 1091
AlwI	GGATC	3 cut(s)	254, 1523, 1536
Ama87I	CYCGRG	4 cut(s)	562, 820, 1094, 1535
Aor13HI	TCCGGA	2 cut(s)	219, 1465
AoxI	GGCC	4 cut(s)	209, 1036, 1476, 1653
ApeKI	GCWGC	2 cut(s)	518, 650
ApoI	RAATTY	3 cut(s)	895, 959, 1324
ArsI	GACNNNNNNTTYG	2 cut(s)	127, 159
Asp700I	GAANNNNTTC	1 cut(s)	410
AspS9I	GGNCC	4 cut(s)	209, 1036, 1476, 1561
AsuHPI	GGTGA	4 cut(s)	646, 794, 1083, 1669
AvaI	CYCGRG	4 cut(s)	562, 820, 1094, 1535
AvaII	GGWCC	1 cut(s)	1561
AxyI	CCTNAGG	1 cut(s)	716
BalI	TGGCCA	1 cut(s)	1655
BamHI	GGATCC	1 cut(s)	1528
BbsI	GAAGAC	1 cut(s)	1778
Bbv12I	GWGCWC	2 cut(s)	398, 860
BbvI	GCAGC	2 cut(s)	505, 637
BccI	CCATC	2 cut(s)	880, 1739
BciT130I	CCWGG	3 cut(s)	105, 1008, 1413
BciVI	GTATCC	2 cut(s)	316, 1010
BclI	TGATCA	2 cut(s)	147, 915
BcoDI	GTCTC	5 cut(s)	128, 187, 559, 581, 1091
BcuI	ACTAGT	1 cut(s)	224
BfaI	CTAG	4 cut(s)	167, 225, 489, 618
BfrI	CTTAAG	1 cut(s)	139
BfuAI	ACCTGC	1 cut(s)	793
BfuI	GTATCC	2 cut(s)	316, 1010
BglII	AGATCT	1 cut(s)	1587
BisI	GCNGC	2 cut(s)	519, 651
BlpI	GCTNAGC	1 cut(s)	1287
BlsI	GCNGC	2 cut(s)	520, 652
Bme1390I	CCNGG	3 cut(s)	105, 1008, 1413
Bme18I	GGWCC	1 cut(s)	1561
BmeT110I	CYCGRG	4 cut(s)	562, 820, 1094, 1535
BmgT120I	GGNCC	4 cut(s)	209, 1036, 1476, 1561
BmiI	GGNNCC	3 cut(s)	77, 109, 1530
BmrFI	CCNGG	3 cut(s)	105, 1008, 1413
BmsI	GCATC	3 cut(s)	916, 1073, 1285
BpiI	GAAGAC	1 cut(s)	1778
BpmI	CTGGAG	2 cut(s)	711, 1647
Bpu10I	CCTNAGC	1 cut(s)	1061
Bpu1102I	GCTNAGC	1 cut(s)	1287
BpuEI	CTTGAG	2 cut(s)	413, 1528
Bsa29I	ATCGAT	1 cut(s)	1119
BsaBI	GATNNNNATC	2 cut(s)	47, 174
BsaHI	GRCGYC	1 cut(s)	372
BsaI	GGTCTC	1 cut(s)	128
BsaJI	CCNNGG	5 cut(s)	111, 354, 593, 1105, 1547
BsaWI	WCCGGW	2 cut(s)	219, 1465
Bsc4I	CCNNNNNNNGG	7 cut(s)	72, 128, 451, 1013, 1045, 1062, 1604
Bse1I	ACTGG	4 cut(s)	62, 373, 694, 1018
Bse21I	CCTNAGG	1 cut(s)	716
Bse3DI	GCAATG	3 cut(s)	94, 1138, 1625
Bse8I	GATNNNNATC	2 cut(s)	47, 174
BseAI	TCCGGA	2 cut(s)	219, 1465
BseBI	CCWGG	3 cut(s)	105, 1008, 1413
BseCI	ATCGAT	1 cut(s)	1119
BseDI	CCNNGG	5 cut(s)	111, 354, 593, 1105, 1547
BseGI	GGATG	3 cut(s)	175, 375, 1258
BseJI	GATNNNNATC	2 cut(s)	47, 174
BseLI	CCNNNNNNNGG	7 cut(s)	72, 128, 451, 1013, 1045, 1062, 1604
BseMI	GCAATG	3 cut(s)	94, 1138, 1625
BseMII	CTCAG	9 cut(s)	255, 411, 537, 719, 933, 941, 1278, 1278, 1405
BseNI	ACTGG	4 cut(s)	62, 373, 694, 1018
BseRI	GAGGAG	2 cut(s)	747, 1122
BseXI	GCAGC	2 cut(s)	505, 637
BseYI	CCCAGC	1 cut(s)	1396
BsgI	GTGCAG	1 cut(s)	636
Bsh1236I	CGCG	1 cut(s)	1713
BshFI	GGCC	4 cut(s)	211, 1038, 1478, 1655
BshVI	ATCGAT	1 cut(s)	1119
BsiHKAI	GWGCWC	2 cut(s)	398, 860
BsiHKCI	CYCGRG	4 cut(s)	562, 820, 1094, 1535
BsiSI	CCGG	2 cut(s)	220, 1466
BslFI	GGGAC	4 cut(s)	716, 1355, 1475, 1497
BslI	CCNNNNNNNGG	7 cut(s)	72, 128, 451, 1013, 1045, 1062, 1604
BsmAI	GTCTC	5 cut(s)	128, 187, 559, 581, 1091
BsmFI	GGGAC	4 cut(s)	716, 1355, 1475, 1497
BsnI	GGCC	4 cut(s)	211, 1038, 1478, 1655
Bso31I	GGTCTC	1 cut(s)	128
BsoBI	CYCGRG	4 cut(s)	562, 820, 1094, 1535
Bsp1286I	GDGCHC	2 cut(s)	398, 860
Bsp13I	TCCGGA	2 cut(s)	219, 1465
Bsp143I	GATC	6 cut(s)	147, 259, 915, 1120, 1528, 1587
Bsp1720I	GCTNAGC	1 cut(s)	1287
Bsp19I	CCATGG	2 cut(s)	111, 1547
BspACI	CCGC	1 cut(s)	233
BspANI	GGCC	4 cut(s)	211, 1038, 1478, 1655
BspCNI	CTCAG	9 cut(s)	256, 412, 536, 720, 934, 942, 1277, 1279, 1404
BspDI	ATCGAT	1 cut(s)	1119
BspEI	TCCGGA	2 cut(s)	219, 1465
BspFNI	CGCG	1 cut(s)	1713
BspHI	TCATGA	1 cut(s)	402
BspLI	GGNNCC	3 cut(s)	77, 109, 1530
BspMI	ACCTGC	1 cut(s)	793
BspPI	GGATC	3 cut(s)	254, 1523, 1536
BspTI	CTTAAG	1 cut(s)	139
BspTNI	GGTCTC	1 cut(s)	128
BsrDI	GCAATG	3 cut(s)	94, 1138, 1625
BsrI	ACTGG	4 cut(s)	62, 373, 694, 1018
BssECI	CCNNGG	5 cut(s)	111, 354, 593, 1105, 1547
BssMI	GATC	6 cut(s)	147, 259, 915, 1120, 1528, 1587
BssNAI	GTATAC	1 cut(s)	1458
BssNI	GRCGYC	1 cut(s)	372
BssT1I	CCWWGG	4 cut(s)	111, 354, 593, 1547
Bst1107I	GTATAC	1 cut(s)	1458
Bst2UI	CCWGG	3 cut(s)	105, 1008, 1413
Bst4CI	ACNGT	4 cut(s)	745, 772, 862, 1777
Bst6I	CTCTTC	4 cut(s)	185, 480, 579, 1374
BstACI	GRCGYC	1 cut(s)	372
BstAFI	CTTAAG	1 cut(s)	139
BstAPI	GCANNNNNTGC	1 cut(s)	1715
BstC8I	GCNNGC	4 cut(s)	119, 516, 648, 1711
BstDSI	CCRYGG	2 cut(s)	111, 1547
BstF5I	GGATG	3 cut(s)	175, 375, 1258
BstFNI	CGCG	1 cut(s)	1713
BstKTI	GATC	6 cut(s)	150, 262, 918, 1123, 1531, 1590
BstMAI	GTCTC	5 cut(s)	128, 187, 559, 581, 1091
BstMBI	GATC	6 cut(s)	147, 259, 915, 1120, 1528, 1587
BstMWI	GCNNNNNNNGC	3 cut(s)	659, 1422, 1715
BstNI	CCWGG	3 cut(s)	105, 1008, 1413
BstNSI	RCATGY	2 cut(s)	518, 1670
BstSCI	CCNGG	3 cut(s)	103, 1006, 1411
BstUI	CGCG	1 cut(s)	1713
BstV1I	GCAGC	2 cut(s)	505, 637
BstV2I	GAAGAC	1 cut(s)	1778
BstX2I	RGATCY	2 cut(s)	1528, 1587
BstXI	CCANNNNNNTGG	2 cut(s)	1338, 1554
BstYI	RGATCY	2 cut(s)	1528, 1587
BstZ17I	GTATAC	1 cut(s)	1458
Bsu15I	ATCGAT	1 cut(s)	1119
Bsu36I	CCTNAGG	1 cut(s)	716
BsuI	GTATCC	2 cut(s)	316, 1010
BsuRI	GGCC	4 cut(s)	211, 1038, 1478, 1655
BsuTUI	ATCGAT	1 cut(s)	1119
BtgI	CCRYGG	2 cut(s)	111, 1547
BtgZI	GCGATG	1 cut(s)	1758
BtsCI	GGATG	3 cut(s)	175, 375, 1258
BtsIMutI	CAGTG	2 cut(s)	55, 867
BveI	ACCTGC	1 cut(s)	793
Cac8I	GCNNGC	4 cut(s)	119, 516, 648, 1711
CciI	TCATGA	1 cut(s)	402
Cfr13I	GGNCC	4 cut(s)	209, 1036, 1476, 1561
ClaI	ATCGAT	1 cut(s)	1119
CseI	GACGC	2 cut(s)	361, 451
Csp6I	GTAC	3 cut(s)	316, 385, 1011
CviQI	GTAC	3 cut(s)	316, 385, 1011
DpnI	GATC	6 cut(s)	149, 261, 917, 1122, 1530, 1589
DpnII	GATC	6 cut(s)	147, 259, 915, 1120, 1528, 1587
EaeI	YGGCCR	1 cut(s)	1653
Eam1104I	CTCTTC	4 cut(s)	185, 480, 579, 1374
EarI	CTCTTC	4 cut(s)	185, 480, 579, 1374
Eco130I	CCWWGG	4 cut(s)	111, 354, 593, 1547
Eco31I	GGTCTC	1 cut(s)	128
Eco47I	GGWCC	1 cut(s)	1561
Eco57I	CTGAAG	2 cut(s)	987, 1355
Eco81I	CCTNAGG	1 cut(s)	716
Eco88I	CYCGRG	4 cut(s)	562, 820, 1094, 1535
EcoO109I	RGGNCCY	1 cut(s)	1561
EcoRI	GAATTC	1 cut(s)	1324
EcoRII	CCWGG	3 cut(s)	103, 1006, 1411
EcoT14I	CCWWGG	4 cut(s)	111, 354, 593, 1547
ErhI	CCWWGG	4 cut(s)	111, 354, 593, 1547
FalI	AAGNNNNNCTT	2 cut(s)	639, 671
FaqI	GGGAC	4 cut(s)	716, 1355, 1475, 1497
FauI	CCCGC	1 cut(s)	226
FbaI	TGATCA	2 cut(s)	147, 915
FblI	GTMKAC	2 cut(s)	238, 1457
Fnu4HI	GCNGC	2 cut(s)	519, 651
FokI	GGATG	3 cut(s)	162, 362, 1245
Fsp4HI	GCNGC	2 cut(s)	519, 651
FspBI	CTAG	4 cut(s)	167, 225, 489, 618
GluI	GCNGC	2 cut(s)	519, 651
GsaI	CCCAGC	1 cut(s)	1400
GsuI	CTGGAG	2 cut(s)	711, 1647
HaeIII	GGCC	4 cut(s)	211, 1038, 1478, 1655
HapII	CCGG	2 cut(s)	220, 1466
HgaI	GACGC	2 cut(s)	361, 451
Hin1I	GRCGYC	1 cut(s)	372
HincII	GTYRAC	3 cut(s)	466, 1230, 1281
HindII	GTYRAC	3 cut(s)	466, 1230, 1281
HpaII	CCGG	2 cut(s)	220, 1466
HphI	GGTGA	4 cut(s)	646, 794, 1083, 1669
Hpy166II	GTNNAC	5 cut(s)	239, 466, 1230, 1281, 1458
Hpy188I	TCNGA	3 cut(s)	729, 951, 1323
Hpy188III	TCNNGA	7 cut(s)	220, 263, 403, 562, 820, 1156, 1466
Hpy8I	GTNNAC	5 cut(s)	239, 466, 1230, 1281, 1458
HpyAV	CCTTC	6 cut(s)	287, 631, 971, 1027, 1039, 1552
HpyCH4III	ACNGT	4 cut(s)	745, 772, 862, 1777
HpyF10VI	GCNNNNNNNGC	3 cut(s)	659, 1422, 1715
Hsp92I	GRCGYC	1 cut(s)	372
Kpn2I	TCCGGA	2 cut(s)	219, 1465
Ksp22I	TGATCA	2 cut(s)	147, 915
Kzo9I	GATC	6 cut(s)	147, 259, 915, 1120, 1528, 1587
LmnI	GCTCC	3 cut(s)	393, 447, 1628
Lsp1109I	GCAGC	2 cut(s)	505, 637
LweI	GCATC	3 cut(s)	916, 1073, 1285
MaeI	CTAG	4 cut(s)	167, 225, 489, 618
MaeIII	GTNAC	5 cut(s)	766, 1048, 1419, 1441, 1675
MalI	GATC	6 cut(s)	149, 261, 917, 1122, 1530, 1589
MboI	GATC	6 cut(s)	147, 259, 915, 1120, 1528, 1587
MboII	GAAGA	6 cut(s)	202, 467, 596, 1361, 1481, 1582
MflI	RGATCY	2 cut(s)	1528, 1587
MhlI	GDGCHC	2 cut(s)	398, 860
MlsI	TGGCCA	1 cut(s)	1655
MluCI	AATT	8 cut(s)	543, 895, 959, 1087, 1124, 1299, 1324, 1461
MluI	ACGCGT	1 cut(s)	1711
MluNI	TGGCCA	1 cut(s)	1655
MlyI	GAGTC	7 cut(s)	552, 561, 583, 689, 834, 1220, 1519
MmeI	TCCRAC	1 cut(s)	1535
Mox20I	TGGCCA	1 cut(s)	1655
MroI	TCCGGA	2 cut(s)	219, 1465
MroXI	GAANNNNTTC	1 cut(s)	410
MscI	TGGCCA	1 cut(s)	1655
MseI	TTAA	4 cut(s)	140, 186, 777, 1780
MslI	CAYNNNNRTG	3 cut(s)	401, 414, 1336
Msp20I	TGGCCA	1 cut(s)	1655
MspA1I	CMGCKG	2 cut(s)	257, 1223
MspCI	CTTAAG	1 cut(s)	139
MspI	CCGG	2 cut(s)	220, 1466
MspR9I	CCNGG	3 cut(s)	105, 1008, 1413
MvaI	CCWGG	3 cut(s)	105, 1008, 1413
MvnI	CGCG	1 cut(s)	1713
MwoI	GCNNNNNNNGC	3 cut(s)	659, 1422, 1715
NcoI	CCATGG	2 cut(s)	111, 1547
NdeII	GATC	6 cut(s)	147, 259, 915, 1120, 1528, 1587
NlaIV	GGNNCC	3 cut(s)	77, 109, 1530
NmuCI	GTSAC	2 cut(s)	1441, 1675
NspI	RCATGY	2 cut(s)	518, 1670
OliI	CACNNNNGTG	1 cut(s)	414
PaeI	GCATGC	1 cut(s)	518
PaeR7I	CTCGAG	1 cut(s)	1535
PagI	TCATGA	1 cut(s)	402
PcsI	WCGNNNNNNNCGW	1 cut(s)	1717
PdmI	GAANNNNTTC	1 cut(s)	410
PfeI	GAWTC	4 cut(s)	695, 946, 1318, 1568
PkrI	GCNGC	2 cut(s)	520, 652
PleI	GAGTC	7 cut(s)	552, 561, 583, 688, 834, 1219, 1518
PpsI	GAGTC	7 cut(s)	552, 561, 583, 688, 834, 1219, 1518
PpuMI	RGGWCCY	1 cut(s)	1561
Psp5II	RGGWCCY	1 cut(s)	1561
Psp6I	CCWGG	3 cut(s)	103, 1006, 1411
PspFI	CCCAGC	1 cut(s)	1396
PspGI	CCWGG	3 cut(s)	103, 1006, 1411
PspN4I	GGNNCC	3 cut(s)	77, 109, 1530
PspPI	GGNCC	4 cut(s)	209, 1036, 1476, 1561
PspPPI	RGGWCCY	1 cut(s)	1561
PspXI	VCTCGAGB	1 cut(s)	1535
PsuI	RGATCY	2 cut(s)	1528, 1587
PvuII	CAGCTG	2 cut(s)	257, 1223
RsaI	GTAC	3 cut(s)	317, 386, 1012
RsaNI	GTAC	3 cut(s)	316, 385, 1011
RseI	CAYNNNNRTG	3 cut(s)	401, 414, 1336
SaqAI	TTAA	4 cut(s)	140, 186, 777, 1780
SatI	GCNGC	2 cut(s)	519, 651
Sau3AI	GATC	6 cut(s)	147, 259, 915, 1120, 1528, 1587
Sau96I	GGNCC	4 cut(s)	209, 1036, 1476, 1561
SchI	GAGTC	7 cut(s)	552, 561, 583, 689, 834, 1220, 1519
ScrFI	CCNGG	3 cut(s)	105, 1008, 1413
SduI	GDGCHC	2 cut(s)	398, 860
SfaNI	GCATC	3 cut(s)	916, 1073, 1285
Sfr274I	CTCGAG	1 cut(s)	1535
SinI	GGWCC	1 cut(s)	1561
SlaI	CTCGAG	1 cut(s)	1535
SmiMI	CAYNNNNRTG	3 cut(s)	401, 414, 1336
SmlI	CTYRAG	4 cut(s)	139, 428, 1507, 1535
SmoI	CTYRAG	4 cut(s)	139, 428, 1507, 1535
SpeI	ACTAGT	1 cut(s)	224
SphI	GCATGC	1 cut(s)	518
Sse9I	AATT	8 cut(s)	543, 895, 959, 1087, 1124, 1299, 1324, 1461
SsiI	CCGC	1 cut(s)	233
SspI	AATATT	1 cut(s)	1003
SspMI	CTAG	4 cut(s)	167, 225, 489, 618
StyD4I	CCNGG	3 cut(s)	103, 1006, 1411
StyI	CCWWGG	4 cut(s)	111, 354, 593, 1547
TaaI	ACNGT	4 cut(s)	745, 772, 862, 1777
TaqI	TCGA	3 cut(s)	1119, 1536, 1691
TasI	AATT	8 cut(s)	543, 895, 959, 1087, 1124, 1299, 1324, 1461
TatI	WGTACW	1 cut(s)	384
TfiI	GAWTC	4 cut(s)	695, 946, 1318, 1568
Tru1I	TTAA	4 cut(s)	140, 186, 777, 1780
Tru9I	TTAA	4 cut(s)	140, 186, 777, 1780
TscAI	CASTG	2 cut(s)	62, 867
TseFI	GTSAC	2 cut(s)	1441, 1675
TseI	GCWGC	2 cut(s)	518, 650
Tsp45I	GTSAC	2 cut(s)	1441, 1675
TspDTI	ATGAA	7 cut(s)	164, 172, 391, 419, 467, 1105, 1582
TspGWI	ACGGA	1 cut(s)	168
TspRI	CASTG	2 cut(s)	62, 867
Vha464I	CTTAAG	1 cut(s)	139
VpaK11BI	GGWCC	1 cut(s)	1561
XapI	RAATTY	3 cut(s)	895, 959, 1324
XceI	RCATGY	2 cut(s)	518, 1670
XhoI	CTCGAG	1 cut(s)	1535
XmiI	GTMKAC	2 cut(s)	238, 1457
XmnI	GAANNNNTTC	1 cut(s)	410
XspI	CTAG	4 cut(s)	167, 225, 489, 618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.