Rh6BG246700

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
45834196 .. 45836328
2133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG246700.1

Sequence Viewer

Length: 1314 bp
ATGGGCTTGCCTCTCATTGGAGAGACCTTAAGTTTGATCATTCCAAGCTACTCCCTAGATGTTCATCCGTTCATTAAGAAGAGACTTCAAAAATATGGGCCTATATTCCGGACTAGTTTGGCCGGTAGACCTGTCGTAATATCAGCTGATCCTGAGTTCAATAACTACATATTTCAGCAAGAAGGCAAGTCTGTTGAACTATGGTACATGGATACAATATCAAAAGTCTTTGTAGGCGATACCAAGGCAAATGCAACTGGCGTCATCCACAAGTACATAAGGAGCACATTCATGAAACACTTCAGTGCTGAGAACCTCAAGGAAAAGTTGCTCCCTCAAATGGAGGATTGCGTCAACAAAACTCTTCATTCGTGGTCTAGTAGGGCATCTGTTGAAGTGAAGCATGCTGCCTCAGTTATGGTTTTGAATTTTAGTGCAAAGCAGATGATCAGTTATGATGCTGAAAAGTCAACTGAGAATCTGAGTGAGAAATTTGCTGAAGTCATTCAAGGTCTTATGTCCTTTCCTTTGAATATTCCAGGTACTGGATACTACAACTGTTTGAAGGGCCAAAAGAAGGTAACAACCATGCTAAGGGATATGCTAAAGGAGAGATGCAATTCACCCGAGACACACCAAGGAGATTTCATCGATCAATTATGCAATGACATGGAGAAAGAGAAGTTCTTGACAGAGGATTTTGGTGTCCTGTTGATATTTGGGGGCTTATTTGCTACCTTTGAGTCCATTTCAGCTGTGTTGACTTTAGCTTTTAGTCTGCTGGAACAACATCCCTCAGTCTTACAAGAGTTGACTGCTGAGCATGATGCAATTCTCAAAAATAGAGAGAATCCAAATTCTCCACTCACATGGGACGAATATAAATCCATGACTTTCACTCTTCAGGTTATCAACGAAACTCTCAGGCTGGGAAATGTTGCACCTGGCTTGTTACGCAGAGCTTTGAAAGATGTCACAATAAAAGGGTATACAATTCCGGAAGATTGGGCCATTATGGTTGTCCCCTCTGCTCTTTACTTGAGTCCCAAGTCATTCAAGGATCCCCTCGAGTTCAATCCATGGCGTTGGAAGGACCTTGATTCACTTGCTACATCAAAGATCTTCATGCCTTTTGGTGGAGGATTGAGGCAATGTGCTGGAGCAGAGTATAGTAGAGTGTTCTTGGCCACATTTCTGCATGTATTTGTCACCAAGTTTAGCTCGACAACAATCAAAGAAGCACGCGTTGCTCGGAATCCTATTTTAGCATTTGGCGATGGTATGCACATCAAGTTTTCAGGGAAGACAATTTAA

Protein Analysis

437

Amino Acids

49.29

Weight (kDa)

8.11

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 18 - 414 3.7e-53 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 545
AccI GTMKAC 2 cut(s) 127, 989
AccII CGCG 1 cut(s) 1245
AccIII TCCGGA 2 cut(s) 108, 997
AclWI GGATC 3 cut(s) 143, 1055, 1068
AcoI YGGCCR 2 cut(s) 120, 1185
AcsI RAATTY 3 cut(s) 427, 491, 856
AcuI CTGAAG 3 cut(s) 286, 519, 887
AcyI GRCGYC 1 cut(s) 261
AfaI GTAC 3 cut(s) 206, 275, 544
AfiI CCNNNNNNNGG 6 cut(s) 17, 340, 545, 577, 594, 1136
AflII CTTAAG 1 cut(s) 28
AflIII ACRYGT 1 cut(s) 1243
AhlI ACTAGT 1 cut(s) 113
AjnI CCWGG 2 cut(s) 538, 943
AleI CACNNNNGTG 1 cut(s) 303
AluBI AGCT 6 cut(s) 48, 146, 755, 770, 962, 1221
AluI AGCT 6 cut(s) 48, 146, 755, 770, 962, 1221
Alw21I GWGCWC 1 cut(s) 287
Alw26I GTCTC 3 cut(s) 17, 76, 623
AlwI GGATC 3 cut(s) 143, 1055, 1068
AlwNI CAGNNNCTG 1 cut(s) 545
Ama87I CYCGRG 2 cut(s) 626, 1067
Aor13HI TCCGGA 2 cut(s) 108, 997
AoxI GGCC 5 cut(s) 98, 120, 568, 1008, 1185
ApeKI GCWGC 1 cut(s) 407
ApoI RAATTY 3 cut(s) 427, 491, 856
ArsI GACNNNNNNTTYG 2 cut(s) 16, 48
Asp700I GAANNNNTTC 2 cut(s) 299, 504
AspS9I GGNCC 4 cut(s) 98, 568, 1008, 1093
AsuHPI GGTGA 2 cut(s) 615, 1201
AvaI CYCGRG 2 cut(s) 626, 1067
AvaII GGWCC 1 cut(s) 1093
BalI TGGCCA 1 cut(s) 1187
BamHI GGATCC 1 cut(s) 1060
BbsI GAAGAC 1 cut(s) 1310
Bbv12I GWGCWC 1 cut(s) 287
BbvI GCAGC 1 cut(s) 394
BccI CCATC 1 cut(s) 1271
BciT130I CCWGG 2 cut(s) 540, 945
BciVI GTATCC 2 cut(s) 205, 542
BclI TGATCA 2 cut(s) 36, 447
BcoDI GTCTC 3 cut(s) 17, 76, 623
BcuI ACTAGT 1 cut(s) 113
BfaI CTAG 3 cut(s) 56, 114, 378
BfrI CTTAAG 1 cut(s) 28
BfuI GTATCC 2 cut(s) 205, 542
BglII AGATCT 1 cut(s) 1119
BisI GCNGC 1 cut(s) 408
BlpI GCTNAGC 1 cut(s) 819
BlsI GCNGC 1 cut(s) 409
Bme1390I CCNGG 2 cut(s) 540, 945
Bme18I GGWCC 1 cut(s) 1093
BmeT110I CYCGRG 2 cut(s) 626, 1067
BmgT120I GGNCC 4 cut(s) 98, 568, 1008, 1093
BmiI GGNNCC 1 cut(s) 1062
BmrFI CCNGG 2 cut(s) 540, 945
BmsI GCATC 4 cut(s) 395, 448, 605, 817
BpiI GAAGAC 1 cut(s) 1310
BpmI CTGGAG 1 cut(s) 1179
Bpu10I CCTNAGC 1 cut(s) 593
Bpu1102I GCTNAGC 1 cut(s) 819
BpuEI CTTGAG 2 cut(s) 302, 1060
Bsa29I ATCGAT 1 cut(s) 651
BsaBI GATNNNNATC 1 cut(s) 63
BsaHI GRCGYC 1 cut(s) 261
BsaI GGTCTC 1 cut(s) 17
BsaJI CCNNGG 3 cut(s) 243, 637, 1079
BsaWI WCCGGW 2 cut(s) 108, 997
Bsc4I CCNNNNNNNGG 6 cut(s) 17, 340, 545, 577, 594, 1136
Bse118I RCCGGY 1 cut(s) 122
Bse1I ACTGG 2 cut(s) 262, 550
Bse3DI GCAATG 2 cut(s) 670, 1157
Bse8I GATNNNNATC 1 cut(s) 63
BseAI TCCGGA 2 cut(s) 108, 997
BseBI CCWGG 2 cut(s) 540, 945
BseCI ATCGAT 1 cut(s) 651
BseDI CCNNGG 3 cut(s) 243, 637, 1079
BseGI GGATG 3 cut(s) 64, 264, 790
BseJI GATNNNNATC 1 cut(s) 63
BseLI CCNNNNNNNGG 6 cut(s) 17, 340, 545, 577, 594, 1136
BseMI GCAATG 2 cut(s) 670, 1157
BseMII CTCAG 8 cut(s) 144, 300, 426, 465, 473, 810, 810, 937
BseNI ACTGG 2 cut(s) 262, 550
BseXI GCAGC 1 cut(s) 394
BseYI CCCAGC 1 cut(s) 928
Bsh1236I CGCG 1 cut(s) 1245
BshFI GGCC 5 cut(s) 100, 122, 570, 1010, 1187
BshVI ATCGAT 1 cut(s) 651
BsiHKAI GWGCWC 1 cut(s) 287
BsiHKCI CYCGRG 2 cut(s) 626, 1067
BsiSI CCGG 3 cut(s) 109, 123, 998
BslFI GGGAC 3 cut(s) 887, 1007, 1029
BslI CCNNNNNNNGG 6 cut(s) 17, 340, 545, 577, 594, 1136
BsmAI GTCTC 3 cut(s) 17, 76, 623
BsmFI GGGAC 3 cut(s) 887, 1007, 1029
BsnI GGCC 5 cut(s) 100, 122, 570, 1010, 1187
Bso31I GGTCTC 1 cut(s) 17
BsoBI CYCGRG 2 cut(s) 626, 1067
Bsp1286I GDGCHC 1 cut(s) 287
Bsp13I TCCGGA 2 cut(s) 108, 997
Bsp143I GATC 6 cut(s) 36, 148, 447, 652, 1060, 1119
Bsp1720I GCTNAGC 1 cut(s) 819
Bsp19I CCATGG 1 cut(s) 1079
BspANI GGCC 5 cut(s) 100, 122, 570, 1010, 1187
BspCNI CTCAG 8 cut(s) 145, 301, 425, 466, 474, 809, 811, 936
BspDI ATCGAT 1 cut(s) 651
BspEI TCCGGA 2 cut(s) 108, 997
BspFNI CGCG 1 cut(s) 1245
BspHI TCATGA 1 cut(s) 291
BspLI GGNNCC 1 cut(s) 1062
BspPI GGATC 3 cut(s) 143, 1055, 1068
BspTI CTTAAG 1 cut(s) 28
BspTNI GGTCTC 1 cut(s) 17
BsrDI GCAATG 2 cut(s) 670, 1157
BsrFI RCCGGY 1 cut(s) 122
BsrI ACTGG 2 cut(s) 262, 550
BssAI RCCGGY 1 cut(s) 122
BssECI CCNNGG 3 cut(s) 243, 637, 1079
BssMI GATC 6 cut(s) 36, 148, 447, 652, 1060, 1119
BssNAI GTATAC 1 cut(s) 990
BssNI GRCGYC 1 cut(s) 261
BssT1I CCWWGG 3 cut(s) 243, 637, 1079
Bst1107I GTATAC 1 cut(s) 990
Bst2UI CCWGG 2 cut(s) 540, 945
Bst4CI ACNGT 1 cut(s) 560
Bst6I CTCTTC 3 cut(s) 74, 369, 906
BstACI GRCGYC 1 cut(s) 261
BstAFI CTTAAG 1 cut(s) 28
BstAPI GCANNNNNTGC 1 cut(s) 1247
BstC8I GCNNGC 3 cut(s) 8, 405, 1243
BstDEI CTNAG 9 cut(s) 153, 309, 412, 474, 482, 593, 796, 819, 923
BstDSI CCRYGG 1 cut(s) 1079
BstF5I GGATG 3 cut(s) 64, 264, 790
BstFNI CGCG 1 cut(s) 1245
BstKTI GATC 6 cut(s) 39, 151, 450, 655, 1063, 1122
BstMAI GTCTC 3 cut(s) 17, 76, 623
BstMBI GATC 6 cut(s) 36, 148, 447, 652, 1060, 1119
BstMWI GCNNNNNNNGC 2 cut(s) 954, 1247
BstNI CCWGG 2 cut(s) 540, 945
BstNSI RCATGY 2 cut(s) 407, 1202
BstSCI CCNGG 2 cut(s) 538, 943
BstUI CGCG 1 cut(s) 1245
BstV1I GCAGC 1 cut(s) 394
BstV2I GAAGAC 1 cut(s) 1310
BstX2I RGATCY 2 cut(s) 1060, 1119
BstXI CCANNNNNNTGG 2 cut(s) 870, 1086
BstYI RGATCY 2 cut(s) 1060, 1119
BstZ17I GTATAC 1 cut(s) 990
Bsu15I ATCGAT 1 cut(s) 651
BsuI GTATCC 2 cut(s) 205, 542
BsuRI GGCC 5 cut(s) 100, 122, 570, 1010, 1187
BsuTUI ATCGAT 1 cut(s) 651
BtgI CCRYGG 1 cut(s) 1079
BtgZI GCGATG 1 cut(s) 1290
BtsCI GGATG 3 cut(s) 64, 264, 790
BtsIMutI CAGTG 1 cut(s) 310
Cac8I GCNNGC 3 cut(s) 8, 405, 1243
CaiI CAGNNNCTG 1 cut(s) 545
CciI TCATGA 1 cut(s) 291
Cfr10I RCCGGY 1 cut(s) 122
Cfr13I GGNCC 4 cut(s) 98, 568, 1008, 1093
ClaI ATCGAT 1 cut(s) 651
CseI GACGC 2 cut(s) 250, 340
Csp6I GTAC 3 cut(s) 205, 274, 543
CviQI GTAC 3 cut(s) 205, 274, 543
DdeI CTNAG 9 cut(s) 153, 309, 412, 474, 482, 593, 796, 819, 923
DpnI GATC 6 cut(s) 38, 150, 449, 654, 1062, 1121
DpnII GATC 6 cut(s) 36, 148, 447, 652, 1060, 1119
EaeI YGGCCR 2 cut(s) 120, 1185
Eam1104I CTCTTC 3 cut(s) 74, 369, 906
EarI CTCTTC 3 cut(s) 74, 369, 906
Eco130I CCWWGG 3 cut(s) 243, 637, 1079
Eco31I GGTCTC 1 cut(s) 17
Eco47I GGWCC 1 cut(s) 1093
Eco57I CTGAAG 3 cut(s) 286, 519, 887
Eco88I CYCGRG 2 cut(s) 626, 1067
EcoO109I RGGNCCY 1 cut(s) 1093
EcoRII CCWGG 2 cut(s) 538, 943
EcoT14I CCWWGG 3 cut(s) 243, 637, 1079
ErhI CCWWGG 3 cut(s) 243, 637, 1079
FaqI GGGAC 3 cut(s) 887, 1007, 1029
FbaI TGATCA 2 cut(s) 36, 447
FblI GTMKAC 2 cut(s) 127, 989
Fnu4HI GCNGC 1 cut(s) 408
FokI GGATG 3 cut(s) 51, 251, 777
Fsp4HI GCNGC 1 cut(s) 408
FspBI CTAG 3 cut(s) 56, 114, 378
GluI GCNGC 1 cut(s) 408
GsaI CCCAGC 1 cut(s) 932
GsuI CTGGAG 1 cut(s) 1179
HaeIII GGCC 5 cut(s) 100, 122, 570, 1010, 1187
HapII CCGG 3 cut(s) 109, 123, 998
HgaI GACGC 2 cut(s) 250, 340
Hin1I GRCGYC 1 cut(s) 261
HincII GTYRAC 4 cut(s) 355, 471, 762, 813
HindII GTYRAC 4 cut(s) 355, 471, 762, 813
HinfI GANTC 6 cut(s) 478, 743, 850, 1042, 1100, 1255
HpaII CCGG 3 cut(s) 109, 123, 998
HphI GGTGA 2 cut(s) 615, 1201
Hpy166II GTNNAC 6 cut(s) 128, 355, 471, 762, 813, 990
Hpy188I TCNGA 2 cut(s) 483, 1254
Hpy188III TCNNGA 5 cut(s) 109, 152, 292, 688, 998
Hpy8I GTNNAC 6 cut(s) 128, 355, 471, 762, 813, 990
HpyAV CCTTC 4 cut(s) 176, 559, 571, 1084
HpyCH4III ACNGT 1 cut(s) 560
HpyCH4V TGCA 8 cut(s) 254, 437, 618, 663, 830, 941, 1198, 1285
HpyF10VI GCNNNNNNNGC 2 cut(s) 954, 1247
HpyF3I CTNAG 9 cut(s) 153, 309, 412, 474, 482, 593, 796, 819, 923
Hsp92I GRCGYC 1 cut(s) 261
Kpn2I TCCGGA 2 cut(s) 108, 997
Ksp22I TGATCA 2 cut(s) 36, 447
Kzo9I GATC 6 cut(s) 36, 148, 447, 652, 1060, 1119
LmnI GCTCC 3 cut(s) 282, 336, 1160
Lsp1109I GCAGC 1 cut(s) 394
LweI GCATC 4 cut(s) 395, 448, 605, 817
MaeI CTAG 3 cut(s) 56, 114, 378
MaeIII GTNAC 4 cut(s) 580, 951, 973, 1207
MalI GATC 6 cut(s) 38, 150, 449, 654, 1062, 1121
MboI GATC 6 cut(s) 36, 148, 447, 652, 1060, 1119
MboII GAAGA 5 cut(s) 91, 356, 893, 1013, 1114
MflI RGATCY 2 cut(s) 1060, 1119
MhlI GDGCHC 1 cut(s) 287
MlsI TGGCCA 1 cut(s) 1187
MluCI AATT 8 cut(s) 427, 491, 619, 656, 831, 856, 993, 1308
MluI ACGCGT 1 cut(s) 1243
MluNI TGGCCA 1 cut(s) 1187
MlyI GAGTC 2 cut(s) 752, 1051
MmeI TCCRAC 1 cut(s) 1067
Mox20I TGGCCA 1 cut(s) 1187
MroI TCCGGA 2 cut(s) 108, 997
MroXI GAANNNNTTC 2 cut(s) 299, 504
MscI TGGCCA 1 cut(s) 1187
MseI TTAA 3 cut(s) 29, 75, 1312
MslI CAYNNNNRTG 3 cut(s) 290, 303, 868
Msp20I TGGCCA 1 cut(s) 1187
MspA1I CMGCKG 2 cut(s) 146, 755
MspCI CTTAAG 1 cut(s) 28
MspI CCGG 3 cut(s) 109, 123, 998
MspR9I CCNGG 2 cut(s) 540, 945
MvaI CCWGG 2 cut(s) 540, 945
MvnI CGCG 1 cut(s) 1245
MwoI GCNNNNNNNGC 2 cut(s) 954, 1247
NcoI CCATGG 1 cut(s) 1079
NdeII GATC 6 cut(s) 36, 148, 447, 652, 1060, 1119
NlaIV GGNNCC 1 cut(s) 1062
NmuCI GTSAC 2 cut(s) 973, 1207
NspI RCATGY 2 cut(s) 407, 1202
OliI CACNNNNGTG 1 cut(s) 303
PaeI GCATGC 1 cut(s) 407
PaeR7I CTCGAG 1 cut(s) 1067
PagI TCATGA 1 cut(s) 291
PdmI GAANNNNTTC 2 cut(s) 299, 504
PfeI GAWTC 4 cut(s) 478, 850, 1100, 1255
PflMI CCANNNNNTGG 1 cut(s) 545
PkrI GCNGC 1 cut(s) 409
PleI GAGTC 2 cut(s) 751, 1050
PpsI GAGTC 2 cut(s) 751, 1050
PpuMI RGGWCCY 1 cut(s) 1093
Psp5II RGGWCCY 1 cut(s) 1093
Psp6I CCWGG 2 cut(s) 538, 943
PspFI CCCAGC 1 cut(s) 928
PspGI CCWGG 2 cut(s) 538, 943
PspN4I GGNNCC 1 cut(s) 1062
PspPI GGNCC 4 cut(s) 98, 568, 1008, 1093
PspPPI RGGWCCY 1 cut(s) 1093
PspXI VCTCGAGB 1 cut(s) 1067
PstNI CAGNNNCTG 1 cut(s) 545
PsuI RGATCY 2 cut(s) 1060, 1119
PvuII CAGCTG 2 cut(s) 146, 755
RsaI GTAC 3 cut(s) 206, 275, 544
RsaNI GTAC 3 cut(s) 205, 274, 543
RseI CAYNNNNRTG 3 cut(s) 290, 303, 868
SaqAI TTAA 3 cut(s) 29, 75, 1312
SatI GCNGC 1 cut(s) 408
Sau3AI GATC 6 cut(s) 36, 148, 447, 652, 1060, 1119
Sau96I GGNCC 4 cut(s) 98, 568, 1008, 1093
SchI GAGTC 2 cut(s) 752, 1051
ScrFI CCNGG 2 cut(s) 540, 945
SduI GDGCHC 1 cut(s) 287
SfaNI GCATC 4 cut(s) 395, 448, 605, 817
Sfr274I CTCGAG 1 cut(s) 1067
SinI GGWCC 1 cut(s) 1093
SlaI CTCGAG 1 cut(s) 1067
SmiMI CAYNNNNRTG 3 cut(s) 290, 303, 868
SmlI CTYRAG 4 cut(s) 28, 317, 1039, 1067
SmoI CTYRAG 4 cut(s) 28, 317, 1039, 1067
SpeI ACTAGT 1 cut(s) 113
SphI GCATGC 1 cut(s) 407
Sse9I AATT 8 cut(s) 427, 491, 619, 656, 831, 856, 993, 1308
SspI AATATT 1 cut(s) 535
SspMI CTAG 3 cut(s) 56, 114, 378
StyD4I CCNGG 2 cut(s) 538, 943
StyI CCWWGG 3 cut(s) 243, 637, 1079
TaaI ACNGT 1 cut(s) 560
TaqI TCGA 3 cut(s) 651, 1068, 1223
TasI AATT 8 cut(s) 427, 491, 619, 656, 831, 856, 993, 1308
TatI WGTACW 1 cut(s) 273
TfiI GAWTC 4 cut(s) 478, 850, 1100, 1255
Tru1I TTAA 3 cut(s) 29, 75, 1312
Tru9I TTAA 3 cut(s) 29, 75, 1312
TscAI CASTG 1 cut(s) 310
TseFI GTSAC 2 cut(s) 973, 1207
TseI GCWGC 1 cut(s) 407
Tsp45I GTSAC 2 cut(s) 973, 1207
TspDTI ATGAA 7 cut(s) 53, 61, 280, 308, 356, 637, 1114
TspGWI ACGGA 1 cut(s) 57
TspRI CASTG 1 cut(s) 310
Van91I CCANNNNNTGG 1 cut(s) 545
Vha464I CTTAAG 1 cut(s) 28
VpaK11BI GGWCC 1 cut(s) 1093
XapI RAATTY 3 cut(s) 427, 491, 856
XceI RCATGY 2 cut(s) 407, 1202
XhoI CTCGAG 1 cut(s) 1067
XmiI GTMKAC 2 cut(s) 127, 989
XmnI GAANNNNTTC 2 cut(s) 299, 504
XspI CTAG 3 cut(s) 56, 114, 378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.