Rmu_sc0005585.1_g000006

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005585.1
Physical Location & Seq
Forward (+)
27056 .. 29002
1947 bp
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UTR
Exon/CDS
Intron
Rmu_sc0005585.1_g000006.1.cds

Sequence Viewer

Length: 1275 bp
atgttgcatgccgaatctagtttaacagaggtgttgttctctttgccttgcagatatgggcctatattccggactagtttggcgggtagacatgtcgtaatatcagctgatcctgagttcaataactacatatttcagcaagaaggcaagtctgttgaactatggtacatggatacaatatcaaaagtctttgtaggcgataccaaggcaaatgcaactggcgtcatccacaagtacataaggagcacattcatgaaacacttcggtgctgagaacctcaaggaaaagttgctccctcaaatggaggattgcgtcaacaaaactcttcattcgtggtctagtagggcatctgttgaagtgaagcatgctgcctcagttatggttttgaattttagtgcaaagcagatgatcagttatgatgctgaaaaatcaactgagaatctgagtgagaaatttgctgaagtcattcaaggtcttatgtcctttcctttgaatattccaggtactggatactacaagtgttcgaagggccaaaagaaggtaacaaccatgctaagggatatgctaaaggagagatgcaattcacccgagacacaccaaggagatttcatcgatcaattatgcaatgacatggagaaagagaagttcttgacagaggattttggtgtcctgttgatatttgggggcttatttgctacctttgagtccatttcagctgtgttgactttagcttttagtctgctggaacaacatccctcagtcttacaagagttgactgctgagcatgatgcaattctcaaaaatagagagaatccaaattctccactcacatgggacgaatataaatccatgactttcactcttcaggttatcaacgaaactctcaggctgggaaatgttgcacctggcttgttacgcagagctttgaaagatgtcacaataaaagggtatacaattccggaagattgggccattatggttgtcccctctgctctttacttgagtcccaagtcattcaaggatcccctcgagttcaatccatggcgttggaaggaccttgattcacttgctacatcaaagatcttcatgccttttggtggaggattgaggcaatgtgctggagcagagtatagtagagtgttcttggccacatttctgcatgtatttgtcaccaagtttagctcgacaacaatcaaagaagcacgcgttgctcggaatcctattttagcatttggcgatggtatgcacatcaagttttcagcgaagacagtttaa

Protein Analysis

424

Amino Acids

47.81

Weight (kDa)

7.17

Isoelectric Point (pI)

37.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 506
AccI GTMKAC 2 cut(s) 88, 950
AccII CGCG 1 cut(s) 1206
AccIII TCCGGA 2 cut(s) 69, 958
AciI CCGC 1 cut(s) 83
AclWI GGATC 3 cut(s) 104, 1016, 1029
AcoI YGGCCR 1 cut(s) 1146
AcsI RAATTY 3 cut(s) 388, 452, 817
AcuI CTGAAG 2 cut(s) 480, 848
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 3 cut(s) 167, 236, 505
AfiI CCNNNNNNNGG 5 cut(s) 301, 506, 538, 555, 1097
AflIII ACRYGT 2 cut(s) 91, 1204
AgsI TTSAA 9 cut(s) 121, 158, 356, 388, 470, 493, 928, 1018, 1036
AhlI ACTAGT 1 cut(s) 74
AjnI CCWGG 2 cut(s) 499, 904
AleI CACNNNNGTG 1 cut(s) 264
AluBI AGCT 5 cut(s) 107, 716, 731, 923, 1182
AluI AGCT 5 cut(s) 107, 716, 731, 923, 1182
Alw21I GWGCWC 1 cut(s) 248
Alw26I GTCTC 1 cut(s) 584
AlwI GGATC 3 cut(s) 104, 1016, 1029
AlwNI CAGNNNCTG 1 cut(s) 506
Ama87I CYCGRG 2 cut(s) 587, 1028
Aor13HI TCCGGA 2 cut(s) 69, 958
AoxI GGCC 4 cut(s) 59, 529, 969, 1146
ApeKI GCWGC 1 cut(s) 368
ApoI RAATTY 3 cut(s) 388, 452, 817
Asp700I GAANNNNTTC 2 cut(s) 260, 465
AspS9I GGNCC 4 cut(s) 59, 529, 969, 1054
AsuHPI GGTGA 2 cut(s) 576, 1162
AsuII TTCGAA 1 cut(s) 524
AvaI CYCGRG 2 cut(s) 587, 1028
AvaII GGWCC 1 cut(s) 1054
BalI TGGCCA 1 cut(s) 1148
BamHI GGATCC 1 cut(s) 1021
BbsI GAAGAC 1 cut(s) 1271
Bbv12I GWGCWC 1 cut(s) 248
BbvI GCAGC 1 cut(s) 355
BccI CCATC 1 cut(s) 1232
BciT130I CCWGG 2 cut(s) 501, 906
BciVI GTATCC 2 cut(s) 166, 503
BclI TGATCA 1 cut(s) 408
BcoDI GTCTC 1 cut(s) 584
BcuI ACTAGT 1 cut(s) 74
BfaI CTAG 3 cut(s) 18, 75, 339
BfuI GTATCC 2 cut(s) 166, 503
BglII AGATCT 1 cut(s) 1080
BisI GCNGC 1 cut(s) 369
BlpI GCTNAGC 1 cut(s) 780
BlsI GCNGC 1 cut(s) 370
Bme1390I CCNGG 2 cut(s) 501, 906
Bme18I GGWCC 1 cut(s) 1054
BmeT110I CYCGRG 2 cut(s) 587, 1028
BmgT120I GGNCC 4 cut(s) 59, 529, 969, 1054
BmiI GGNNCC 1 cut(s) 1023
BmrFI CCNGG 2 cut(s) 501, 906
BmsI GCATC 4 cut(s) 356, 409, 566, 778
BpiI GAAGAC 1 cut(s) 1271
BpmI CTGGAG 1 cut(s) 1140
Bpu10I CCTNAGC 1 cut(s) 554
Bpu1102I GCTNAGC 1 cut(s) 780
Bpu14I TTCGAA 1 cut(s) 524
BpuEI CTTGAG 2 cut(s) 263, 1021
Bsa29I ATCGAT 1 cut(s) 612
BsaHI GRCGYC 1 cut(s) 222
BsaJI CCNNGG 3 cut(s) 204, 598, 1040
BsaWI WCCGGW 2 cut(s) 69, 958
Bsc4I CCNNNNNNNGG 5 cut(s) 301, 506, 538, 555, 1097
Bse1I ACTGG 2 cut(s) 223, 511
Bse3DI GCAATG 2 cut(s) 631, 1118
BseAI TCCGGA 2 cut(s) 69, 958
BseBI CCWGG 2 cut(s) 501, 906
BseCI ATCGAT 1 cut(s) 612
BseDI CCNNGG 3 cut(s) 204, 598, 1040
BseGI GGATG 2 cut(s) 225, 751
BseLI CCNNNNNNNGG 5 cut(s) 301, 506, 538, 555, 1097
BseMI GCAATG 2 cut(s) 631, 1118
BseMII CTCAG 8 cut(s) 105, 261, 387, 426, 434, 771, 771, 898
BseNI ACTGG 2 cut(s) 223, 511
BseXI GCAGC 1 cut(s) 355
BseYI CCCAGC 1 cut(s) 889
Bsh1236I CGCG 1 cut(s) 1206
BshFI GGCC 4 cut(s) 61, 531, 971, 1148
BshVI ATCGAT 1 cut(s) 612
BsiHKAI GWGCWC 1 cut(s) 248
BsiHKCI CYCGRG 2 cut(s) 587, 1028
BsiSI CCGG 2 cut(s) 70, 959
BslFI GGGAC 3 cut(s) 848, 968, 990
BslI CCNNNNNNNGG 5 cut(s) 301, 506, 538, 555, 1097
BsmAI GTCTC 1 cut(s) 584
BsmFI GGGAC 3 cut(s) 848, 968, 990
BsnI GGCC 4 cut(s) 61, 531, 971, 1148
BsoBI CYCGRG 2 cut(s) 587, 1028
Bsp119I TTCGAA 1 cut(s) 524
Bsp1286I GDGCHC 1 cut(s) 248
Bsp13I TCCGGA 2 cut(s) 69, 958
Bsp143I GATC 5 cut(s) 109, 408, 613, 1021, 1080
Bsp1720I GCTNAGC 1 cut(s) 780
Bsp19I CCATGG 1 cut(s) 1040
BspACI CCGC 1 cut(s) 83
BspANI GGCC 4 cut(s) 61, 531, 971, 1148
BspCNI CTCAG 8 cut(s) 106, 262, 386, 427, 435, 770, 772, 897
BspDI ATCGAT 1 cut(s) 612
BspEI TCCGGA 2 cut(s) 69, 958
BspFNI CGCG 1 cut(s) 1206
BspHI TCATGA 1 cut(s) 252
BspLI GGNNCC 1 cut(s) 1023
BspPI GGATC 3 cut(s) 104, 1016, 1029
BspT104I TTCGAA 1 cut(s) 524
BsrDI GCAATG 2 cut(s) 631, 1118
BsrI ACTGG 2 cut(s) 223, 511
BssECI CCNNGG 3 cut(s) 204, 598, 1040
BssMI GATC 5 cut(s) 109, 408, 613, 1021, 1080
BssNAI GTATAC 1 cut(s) 951
BssNI GRCGYC 1 cut(s) 222
BssT1I CCWWGG 3 cut(s) 204, 598, 1040
Bst1107I GTATAC 1 cut(s) 951
Bst2UI CCWGG 2 cut(s) 501, 906
Bst4CI ACNGT 1 cut(s) 1270
Bst6I CTCTTC 2 cut(s) 330, 867
BstACI GRCGYC 1 cut(s) 222
BstAPI GCANNNNNTGC 1 cut(s) 1208
BstBI TTCGAA 1 cut(s) 524
BstC8I GCNNGC 3 cut(s) 9, 366, 1204
BstDEI CTNAG 9 cut(s) 114, 270, 373, 435, 443, 554, 757, 780, 884
BstDSI CCRYGG 1 cut(s) 1040
BstF5I GGATG 2 cut(s) 225, 751
BstFNI CGCG 1 cut(s) 1206
BstKTI GATC 5 cut(s) 112, 411, 616, 1024, 1083
BstMAI GTCTC 1 cut(s) 584
BstMBI GATC 5 cut(s) 109, 408, 613, 1021, 1080
BstMWI GCNNNNNNNGC 2 cut(s) 915, 1208
BstNI CCWGG 2 cut(s) 501, 906
BstNSI RCATGY 4 cut(s) 11, 95, 368, 1163
BstSCI CCNGG 2 cut(s) 499, 904
BstUI CGCG 1 cut(s) 1206
BstV1I GCAGC 1 cut(s) 355
BstV2I GAAGAC 1 cut(s) 1271
BstX2I RGATCY 2 cut(s) 1021, 1080
BstXI CCANNNNNNTGG 2 cut(s) 831, 1047
BstYI RGATCY 2 cut(s) 1021, 1080
BstZ17I GTATAC 1 cut(s) 951
Bsu15I ATCGAT 1 cut(s) 612
BsuI GTATCC 2 cut(s) 166, 503
BsuRI GGCC 4 cut(s) 61, 531, 971, 1148
BsuTUI ATCGAT 1 cut(s) 612
BtgI CCRYGG 1 cut(s) 1040
BtgZI GCGATG 1 cut(s) 1251
BtsCI GGATG 2 cut(s) 225, 751
Cac8I GCNNGC 3 cut(s) 9, 366, 1204
CaiI CAGNNNCTG 1 cut(s) 506
CciI TCATGA 1 cut(s) 252
Cfr13I GGNCC 4 cut(s) 59, 529, 969, 1054
ClaI ATCGAT 1 cut(s) 612
CseI GACGC 2 cut(s) 211, 301
Csp6I GTAC 3 cut(s) 166, 235, 504
CviQI GTAC 3 cut(s) 166, 235, 504
DdeI CTNAG 9 cut(s) 114, 270, 373, 435, 443, 554, 757, 780, 884
DpnI GATC 5 cut(s) 111, 410, 615, 1023, 1082
DpnII GATC 5 cut(s) 109, 408, 613, 1021, 1080
EaeI YGGCCR 1 cut(s) 1146
Eam1104I CTCTTC 2 cut(s) 330, 867
EarI CTCTTC 2 cut(s) 330, 867
Eco130I CCWWGG 3 cut(s) 204, 598, 1040
Eco47I GGWCC 1 cut(s) 1054
Eco57I CTGAAG 2 cut(s) 480, 848
Eco88I CYCGRG 2 cut(s) 587, 1028
EcoO109I RGGNCCY 1 cut(s) 1054
EcoRII CCWGG 2 cut(s) 499, 904
EcoT14I CCWWGG 3 cut(s) 204, 598, 1040
ErhI CCWWGG 3 cut(s) 204, 598, 1040
FaqI GGGAC 3 cut(s) 848, 968, 990
FauI CCCGC 1 cut(s) 76
FbaI TGATCA 1 cut(s) 408
FblI GTMKAC 2 cut(s) 88, 950
Fnu4HI GCNGC 1 cut(s) 369
FokI GGATG 2 cut(s) 212, 738
Fsp4HI GCNGC 1 cut(s) 369
FspBI CTAG 3 cut(s) 18, 75, 339
GluI GCNGC 1 cut(s) 369
GsaI CCCAGC 1 cut(s) 893
GsuI CTGGAG 1 cut(s) 1140
HaeIII GGCC 4 cut(s) 61, 531, 971, 1148
HapII CCGG 2 cut(s) 70, 959
HgaI GACGC 2 cut(s) 211, 301
Hin1I GRCGYC 1 cut(s) 222
HincII GTYRAC 3 cut(s) 316, 723, 774
HindII GTYRAC 3 cut(s) 316, 723, 774
HinfI GANTC 7 cut(s) 14, 439, 704, 811, 1003, 1061, 1216
HpaII CCGG 2 cut(s) 70, 959
HphI GGTGA 2 cut(s) 576, 1162
Hpy166II GTNNAC 5 cut(s) 89, 316, 723, 774, 951
Hpy188I TCNGA 2 cut(s) 444, 1215
Hpy188III TCNNGA 5 cut(s) 70, 113, 253, 649, 959
Hpy8I GTNNAC 5 cut(s) 89, 316, 723, 774, 951
HpyAV CCTTC 4 cut(s) 137, 520, 532, 1045
HpyCH4III ACNGT 1 cut(s) 1270
HpyF10VI GCNNNNNNNGC 2 cut(s) 915, 1208
HpyF3I CTNAG 9 cut(s) 114, 270, 373, 435, 443, 554, 757, 780, 884
Hsp92I GRCGYC 1 cut(s) 222
Kpn2I TCCGGA 2 cut(s) 69, 958
Ksp22I TGATCA 1 cut(s) 408
Kzo9I GATC 5 cut(s) 109, 408, 613, 1021, 1080
LmnI GCTCC 3 cut(s) 243, 297, 1121
Lsp1109I GCAGC 1 cut(s) 355
LweI GCATC 4 cut(s) 356, 409, 566, 778
MaeI CTAG 3 cut(s) 18, 75, 339
MaeIII GTNAC 4 cut(s) 541, 912, 934, 1168
MalI GATC 5 cut(s) 111, 410, 615, 1023, 1082
MboI GATC 5 cut(s) 109, 408, 613, 1021, 1080
MboII GAAGA 4 cut(s) 317, 854, 974, 1075
MflI RGATCY 2 cut(s) 1021, 1080
MhlI GDGCHC 1 cut(s) 248
MlsI TGGCCA 1 cut(s) 1148
MluCI AATT 7 cut(s) 388, 452, 580, 617, 792, 817, 954
MluI ACGCGT 1 cut(s) 1204
MluNI TGGCCA 1 cut(s) 1148
MlyI GAGTC 2 cut(s) 713, 1012
MmeI TCCRAC 1 cut(s) 1028
Mox20I TGGCCA 1 cut(s) 1148
MroI TCCGGA 2 cut(s) 69, 958
MroXI GAANNNNTTC 2 cut(s) 260, 465
MscI TGGCCA 1 cut(s) 1148
MseI TTAA 2 cut(s) 23, 1273
MslI CAYNNNNRTG 3 cut(s) 251, 264, 829
Msp20I TGGCCA 1 cut(s) 1148
MspA1I CMGCKG 2 cut(s) 107, 716
MspI CCGG 2 cut(s) 70, 959
MspR9I CCNGG 2 cut(s) 501, 906
MvaI CCWGG 2 cut(s) 501, 906
MvnI CGCG 1 cut(s) 1206
MwoI GCNNNNNNNGC 2 cut(s) 915, 1208
NcoI CCATGG 1 cut(s) 1040
NdeII GATC 5 cut(s) 109, 408, 613, 1021, 1080
NlaIV GGNNCC 1 cut(s) 1023
NmuCI GTSAC 2 cut(s) 934, 1168
NspI RCATGY 4 cut(s) 11, 95, 368, 1163
NspV TTCGAA 1 cut(s) 524
OliI CACNNNNGTG 1 cut(s) 264
PaeI GCATGC 2 cut(s) 11, 368
PaeR7I CTCGAG 1 cut(s) 1028
PagI TCATGA 1 cut(s) 252
PciI ACATGT 1 cut(s) 91
PdmI GAANNNNTTC 2 cut(s) 260, 465
PfeI GAWTC 5 cut(s) 14, 439, 811, 1061, 1216
PflMI CCANNNNNTGG 1 cut(s) 506
PkrI GCNGC 1 cut(s) 370
PleI GAGTC 2 cut(s) 712, 1011
PpsI GAGTC 2 cut(s) 712, 1011
PpuMI RGGWCCY 1 cut(s) 1054
PscI ACATGT 1 cut(s) 91
Psp5II RGGWCCY 1 cut(s) 1054
Psp6I CCWGG 2 cut(s) 499, 904
PspFI CCCAGC 1 cut(s) 889
PspGI CCWGG 2 cut(s) 499, 904
PspN4I GGNNCC 1 cut(s) 1023
PspPI GGNCC 4 cut(s) 59, 529, 969, 1054
PspPPI RGGWCCY 1 cut(s) 1054
PspXI VCTCGAGB 1 cut(s) 1028
PstNI CAGNNNCTG 1 cut(s) 506
PsuI RGATCY 2 cut(s) 1021, 1080
PvuII CAGCTG 2 cut(s) 107, 716
RsaI GTAC 3 cut(s) 167, 236, 505
RsaNI GTAC 3 cut(s) 166, 235, 504
RseI CAYNNNNRTG 3 cut(s) 251, 264, 829
SaqAI TTAA 2 cut(s) 23, 1273
SatI GCNGC 1 cut(s) 369
Sau3AI GATC 5 cut(s) 109, 408, 613, 1021, 1080
Sau96I GGNCC 4 cut(s) 59, 529, 969, 1054
SchI GAGTC 2 cut(s) 713, 1012
ScrFI CCNGG 2 cut(s) 501, 906
SduI GDGCHC 1 cut(s) 248
SfaNI GCATC 4 cut(s) 356, 409, 566, 778
Sfr274I CTCGAG 1 cut(s) 1028
SfuI TTCGAA 1 cut(s) 524
SinI GGWCC 1 cut(s) 1054
SlaI CTCGAG 1 cut(s) 1028
SmiMI CAYNNNNRTG 3 cut(s) 251, 264, 829
SmlI CTYRAG 3 cut(s) 278, 1000, 1028
SmoI CTYRAG 3 cut(s) 278, 1000, 1028
SpeI ACTAGT 1 cut(s) 74
SphI GCATGC 2 cut(s) 11, 368
Sse9I AATT 7 cut(s) 388, 452, 580, 617, 792, 817, 954
SsiI CCGC 1 cut(s) 83
SspI AATATT 1 cut(s) 496
SspMI CTAG 3 cut(s) 18, 75, 339
StyD4I CCNGG 2 cut(s) 499, 904
StyI CCWWGG 3 cut(s) 204, 598, 1040
TaaI ACNGT 1 cut(s) 1270
TaqI TCGA 4 cut(s) 524, 612, 1029, 1184
TasI AATT 7 cut(s) 388, 452, 580, 617, 792, 817, 954
TatI WGTACW 1 cut(s) 234
TfiI GAWTC 5 cut(s) 14, 439, 811, 1061, 1216
Tru1I TTAA 2 cut(s) 23, 1273
Tru9I TTAA 2 cut(s) 23, 1273
TseFI GTSAC 2 cut(s) 934, 1168
TseI GCWGC 1 cut(s) 368
Tsp45I GTSAC 2 cut(s) 934, 1168
TspDTI ATGAA 5 cut(s) 241, 269, 317, 598, 1075
Van91I CCANNNNNTGG 1 cut(s) 506
VpaK11BI GGWCC 1 cut(s) 1054
XapI RAATTY 3 cut(s) 388, 452, 817
XceI RCATGY 4 cut(s) 11, 95, 368, 1163
XhoI CTCGAG 1 cut(s) 1028
XmiI GTMKAC 2 cut(s) 88, 950
XmnI GAANNNNTTC 2 cut(s) 260, 465
XspI CTAG 3 cut(s) 18, 75, 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.