Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001293

Physical Location & Seq

Genomic Coordinates Reverse (-)

18562773 .. 18565312

Gene Structure 2540 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0131600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGTCAGTTGACTCTTTGACTCTGCAATTCTTCAACCAAGACGGCAAGACCCTCCTCACAATTCCTCAAAACCCCGCCACAAAATCCCGATCAAAAATCCAACCCATTTCAAATTTCAATCCCATAAAGATGAACACGTTCCTTAAAAACATGGAAATGCCCTCCGCCAAAACAGTGATGTCAACGGCGGCCTCCGTCGCCGCCACCGCCATGGTCCTCCGCTCCATTTCTCGCGACTTCATACCCAAGGACGTCCACCGCTATCTTTCCACCAAAATCAGACGCTTAATGAACTCGCTCTCTTCGCAACTCACCCTAGTCATCGACGAGTTCGAGGGTCTCAACCGGAACCACATTTTCACGGCCGCCCAAGTTTACTTACGACCCACAATCTCCCCAAATTCCAAAAGGTTCAGAGTCACAATGCCGACCCAAGAAAACAAAATTTCCGTTTCCATGGAAAAGAACGAAGAGATCATTGACTTCTTCGACGGAGTCAAACTCCAGTGGAAGCTGGTCTCAACCCAAATCTCGTCCAAGTACATAGACGGCCCAGGATCCGAATACGAGTCCACGGTCAAGTCGGAGCTCCGGTACTTGGAGTTGAGCTTCCACAAGAAGCACAAAGACTTGGTTCTTGGTTCTTACTTGCCATTTGTATTGCAAAAGGCCGAGGAAGTTAAGGAAGAGAGGAAGACCTTGAAGCTCTTCACTTTGAAATATGGGAGAAGGATTCGAGTAGTGGGAGGGTCCACGTGGCAATCAGTGAACCTCGATCACCCCGCGACGTTCGACACATTGGCAATGGATGAAGAGGCCCACAAGATGATAGTGGAGGATCTTGAGAGGTTTGTGAGGAGGAAGGAGTATTATAGGAAGGTTGGGAAGGCTTGGAAAAGGGGATACTTGCTGTTTGGGCCTCCTGGGACTGGGAAGTCGAGCTTGGTTGCTGCCATGGCCAATTACTTGAATTTTGATATCTATGACTTGGAGTTGAGTGAGATTAGGAGTAATTCTCAGCTCAGGAGGTTGATGATGTCCACGGCAAACAGGTCGATTCTTGTGGTGGAGGATATTGATTGCTCCATTGAACTACAGAACAGGCTTGCAAATGCCAGGGCCGCCGGCCCTCGTGCTTTTAATGCTCCGAAGACTGAGGTGACTCTGTCAGGATTGCTCAACTTCATAGATGGACTGTGGTCAAGCTGTGGCGACGAGCGGATCATAGTCTTCACTACCAATCACAAAGATCGGCTTGACTCTGCCTTGTTACGCCCTGGTCGAATGGATGTGCACATCCACATGTCCTTTTGCACGCCTTGTGGGTTCAAAACTCTTGCTTCTAACTACCTTGGAATTATGGAGCACACACTTTTCTTTGACATAGAGAAGTTGATAGCCACAATGAAGGTTACTCCGGCAGAGATAGGAGAGCAGTTACTGAAGAATGAGGAGCCTGAAGGTGCATTGAGAGACCTACTTGAGTTCCTTGAGAGGAAGAATAGAGCAATTGAAGAAGCTGCAAGTAAGTCAGAGTTGAGCACCAAAGAAACACATAGGAAAACCGATGAATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016491 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044238 GO:0048856 GO:0048878 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

525

Amino Acids

59.83

Weight (kDa)

9.1

Isoelectric Point (pI)

49.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	81 - 173	3.8e-26	Domain associated at C-terminal with AAA
AAA	PF00004	302 - 435	1.6e-19	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	438 - 506	2.7e-21	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001293)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16500 FvH4_2g16500
malus_domestica	MD05G1133200.v1.1 MD05G1133300.v1.1 MD05G1133400.v1.1 MD10G1138400.v1.1
prunus_persica	Prupe.8G177200_v2.0.a1 Prupe.8G177300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0490971 RchiOBHm_Chr6g0280371 RchiOBHm_Chr6g0280421 RchiOBHm_Chr6g0280441 RchiOBHm_Chr6g0280471 RchiOBHm_Chr6g0280481 RchiOBHm_Chr6g0280521
rosa_laevigata	RLG00000013058 RLG00000013063 RLG00000013064 RLG00000022868
rosa_multiflora	Rmu_co8277759.1_g000001 Rmu_sc0002754.1_g000040 Rmu_sc0004211.1_g000027 Rmu_sc0005585.1_g000006 Rmu_sc0015818.1_g000001 Rmu_ssc0000386.1_g000014
rosa_roxburghii	Rroxscaffold_7G00188020 Rroxscaffold_7G00188060
rosa_rugosa	Rorug06G0131600 Rorug06G0131700 Rorug06G0131800 Rorug06G0131800
rosa_samantha	Rh3AG295400 Rh3BG331700 Rh3CG328600 Rh3DG328800 Rh3DG328900 Rh3DG329200 Rh6AG243300 Rh6AG243600 Rh6AG243700 Rh6AG244200 Rh6BG245900 Rh6BG246100 Rh6BG246700 Rh6CG247500 Rh6CG247700 Rh6CG248100 Rh6DG238900 Rh6DG239100 Rh6DG239400 Rh6DG239500
rosa_wichuraiana	Rw3G026060 Rw6G021140 Rw6G021150 Rw6G021160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	934
AatII	GACGTC	1 cut(s)	255
AccBSI	CCGCTC	2 cut(s)	222, 1219
AccII	CGCG	2 cut(s)	234, 785
AclWI	GGATC	4 cut(s)	552, 565, 846, 1229
AcoI	YGGCCR	2 cut(s)	363, 957
AcsI	RAATTY	4 cut(s)	112, 400, 444, 970
AcuI	CTGAAG	2 cut(s)	1463, 1479
AcvI	CACGTG	1 cut(s)	756
AcyI	GRCGYC	1 cut(s)	252
AfaI	GTAC	2 cut(s)	542, 596
AfiI	CCNNNNNNNGG	2 cut(s)	598, 929
AflIII	ACRYGT	2 cut(s)	135, 1302
AgsI	TTSAA	9 cut(s)	34, 111, 118, 703, 718, 970, 1091, 1330, 1514
AjnI	CCWGG	4 cut(s)	553, 922, 1115, 1276
AjuI	GAANNNNNNNTTGG	2 cut(s)	926, 958
AluBI	AGCT	8 cut(s)	514, 589, 609, 706, 942, 1021, 1206, 1520
AluI	AGCT	8 cut(s)	514, 589, 609, 706, 942, 1021, 1206, 1520
Alw21I	GWGCWC	4 cut(s)	591, 1296, 1368, 1544
Alw26I	GTCTC	3 cut(s)	344, 523, 1467
Alw44I	GTGCAC	1 cut(s)	1292
AlwI	GGATC	4 cut(s)	552, 565, 846, 1229
AlwNI	CAGNNNCTG	1 cut(s)	1441
AoxI	GGCC	9 cut(s)	189, 363, 550, 669, 816, 917, 957, 1119, 1126
ApaLI	GTGCAC	1 cut(s)	1292
ApeKI	GCWGC	2 cut(s)	950, 1520
ApoI	RAATTY	4 cut(s)	112, 400, 444, 970
Asp700I	GAANNNNTTC	2 cut(s)	137, 707
AspS9I	GGNCC	7 cut(s)	214, 551, 750, 817, 917, 1119, 1127
AsuHPI	GGTGA	3 cut(s)	304, 770, 1171
AvaII	GGWCC	2 cut(s)	214, 750
BaeGI	GKGCMC	1 cut(s)	1296
BalI	TGGCCA	1 cut(s)	959
BamHI	GGATCC	1 cut(s)	557
BanII	GRGCYC	1 cut(s)	591
BauI	CACGAG	1 cut(s)	1131
BbrPI	CACGTG	1 cut(s)	756
BbsI	GAAGAC	3 cut(s)	701, 1157, 1222
Bbv12I	GWGCWC	4 cut(s)	591, 1296, 1368, 1544
BbvI	GCAGC	2 cut(s)	937, 1507
BccI	CCATC	1 cut(s)	1184
BceAI	ACGGC	5 cut(s)	58, 201, 378, 565, 1059
BcgI	CGANNNNNNTGC	2 cut(s)	1035, 1069
BciT130I	CCWGG	4 cut(s)	555, 924, 1117, 1278
BciVI	GTATCC	1 cut(s)	896
BcoDI	GTCTC	3 cut(s)	344, 523, 1467
BfaI	CTAG	1 cut(s)	317
BfmI	CTRYAG	1 cut(s)	1094
BfuI	GTATCC	1 cut(s)	896
BisI	GCNGC	6 cut(s)	189, 201, 366, 951, 1122, 1521
BlsI	GCNGC	6 cut(s)	190, 202, 367, 952, 1123, 1522
Bme1390I	CCNGG	4 cut(s)	555, 924, 1117, 1278
Bme18I	GGWCC	2 cut(s)	214, 750
BmgT120I	GGNCC	7 cut(s)	214, 551, 750, 817, 917, 1119, 1127
BmiI	GGNNCC	4 cut(s)	350, 559, 751, 1455
BmrFI	CCNGG	4 cut(s)	555, 924, 1117, 1278
BmrI	ACTGGG	1 cut(s)	939
BmuI	ACTGGG	1 cut(s)	939
BoxI	GACNNNNGTC	1 cut(s)	1198
BpiI	GAAGAC	3 cut(s)	701, 1157, 1222
BplI	GAGNNNNNCTC	4 cut(s)	486, 518, 1000, 1032
BpmI	CTGGAG	1 cut(s)	488
Bpu10I	CCTNAGC	1 cut(s)	1022
BpuEI	CTTGAG	3 cut(s)	863, 1502, 1511
BsaAI	YACGTR	1 cut(s)	756
BsaHI	GRCGYC	1 cut(s)	252
BsaI	GGTCTC	3 cut(s)	344, 523, 1467
BsaWI	WCCGGW	2 cut(s)	345, 591
BsaXI	ACNNNNNCTCC	2 cut(s)	578, 608
Bsc4I	CCNNNNNNNGG	2 cut(s)	598, 929
Bse118I	RCCGGY	1 cut(s)	1124
Bse1I	ACTGG	2 cut(s)	505, 934
Bse3DI	GCAATG	1 cut(s)	810
BseBI	CCWGG	4 cut(s)	555, 924, 1117, 1278
BseGI	GGATG	3 cut(s)	814, 1294, 1296
BseLI	CCNNNNNNNGG	2 cut(s)	598, 929
BseMI	GCAATG	1 cut(s)	810
BseMII	CTCAG	3 cut(s)	1031, 1036, 1146
BseNI	ACTGG	2 cut(s)	505, 934
BseRI	GAGGAG	3 cut(s)	44, 871, 1466
BseSI	GKGCMC	1 cut(s)	1296
BseX3I	CGGCCG	1 cut(s)	363
BseXI	GCAGC	2 cut(s)	937, 1507
Bsh1236I	CGCG	2 cut(s)	234, 785
Bsh1285I	CGRYCG	1 cut(s)	366
BshFI	GGCC	9 cut(s)	191, 365, 552, 671, 818, 919, 959, 1121, 1128
BsiEI	CGRYCG	1 cut(s)	366
BsiHKAI	GWGCWC	4 cut(s)	591, 1296, 1368, 1544
BsiSI	CCGG	4 cut(s)	346, 592, 1125, 1418
BslFI	GGGAC	1 cut(s)	940
BslI	CCNNNNNNNGG	2 cut(s)	598, 929
BsmAI	GTCTC	3 cut(s)	344, 523, 1467
BsmFI	GGGAC	1 cut(s)	940
BsnI	GGCC	9 cut(s)	191, 365, 552, 671, 818, 919, 959, 1121, 1128
Bso31I	GGTCTC	3 cut(s)	344, 523, 1467
Bsp1286I	GDGCHC	4 cut(s)	591, 1296, 1368, 1544
Bsp143I	GATC	7 cut(s)	89, 474, 557, 775, 838, 1221, 1249
Bsp19I	CCATGG	3 cut(s)	210, 456, 954
Bsp68I	TCGCGA	1 cut(s)	234
BspANI	GGCC	9 cut(s)	191, 365, 552, 671, 818, 919, 959, 1121, 1128
BspCNI	CTCAG	3 cut(s)	1030, 1035, 1147
BspFNI	CGCG	2 cut(s)	234, 785
BspLI	GGNNCC	4 cut(s)	350, 559, 751, 1455
BspPI	GGATC	4 cut(s)	552, 565, 846, 1229
BspQI	GCTCTTC	1 cut(s)	713
BspTNI	GGTCTC	3 cut(s)	344, 523, 1467
BsrBI	CCGCTC	2 cut(s)	222, 1219
BsrDI	GCAATG	1 cut(s)	810
BsrFI	RCCGGY	1 cut(s)	1124
BsrI	ACTGG	2 cut(s)	505, 934
BssAI	RCCGGY	1 cut(s)	1124
BssMI	GATC	7 cut(s)	89, 474, 557, 775, 838, 1221, 1249
BssNI	GRCGYC	1 cut(s)	252
BssSI	CACGAG	1 cut(s)	1131
BssT1I	CCWWGG	5 cut(s)	210, 246, 456, 954, 1351
Bst2BI	CACGAG	1 cut(s)	1131
Bst2UI	CCWGG	4 cut(s)	555, 924, 1117, 1278
Bst4CI	ACNGT	3 cut(s)	175, 577, 1197
Bst6I	CTCTTC	5 cut(s)	307, 465, 681, 713, 807
BstACI	GRCGYC	1 cut(s)	252
BstBAI	YACGTR	1 cut(s)	756
BstC8I	GCNNGC	3 cut(s)	1107, 1126, 1316
BstDEI	CTNAG	3 cut(s)	1017, 1022, 1155
BstDSI	CCRYGG	5 cut(s)	210, 456, 573, 954, 1041
BstF5I	GGATG	3 cut(s)	814, 1294, 1296
BstFNI	CGCG	2 cut(s)	234, 785
BstKTI	GATC	7 cut(s)	92, 477, 560, 778, 841, 1224, 1252
BstMAI	GTCTC	3 cut(s)	344, 523, 1467
BstMBI	GATC	7 cut(s)	89, 474, 557, 775, 838, 1221, 1249
BstMCI	CGRYCG	1 cut(s)	366
BstMWI	GCNNNNNNNGC	7 cut(s)	197, 206, 304, 916, 956, 1121, 1142
BstNI	CCWGG	4 cut(s)	555, 924, 1117, 1278
BstNSI	RCATGY	1 cut(s)	1306
BstPAI	GACNNNNGTC	1 cut(s)	1198
BstSCI	CCNGG	4 cut(s)	553, 922, 1115, 1276
BstSFI	CTRYAG	1 cut(s)	1094
BstSLI	GKGCMC	1 cut(s)	1296
BstUI	CGCG	2 cut(s)	234, 785
BstV1I	GCAGC	2 cut(s)	937, 1507
BstV2I	GAAGAC	3 cut(s)	701, 1157, 1222
BstX2I	RGATCY	2 cut(s)	557, 838
BstXI	CCANNNNNNTGG	1 cut(s)	211
BstYI	RGATCY	2 cut(s)	557, 838
BstZI	CGGCCG	1 cut(s)	363
BsuI	GTATCC	1 cut(s)	896
BsuRI	GGCC	9 cut(s)	191, 365, 552, 671, 818, 919, 959, 1121, 1128
BtgI	CCRYGG	5 cut(s)	210, 456, 573, 954, 1041
BtsCI	GGATG	3 cut(s)	814, 1294, 1296
BtsIMutI	CAGTG	3 cut(s)	180, 512, 771
BtuMI	TCGCGA	1 cut(s)	234
Cac8I	GCNNGC	3 cut(s)	1107, 1126, 1316
CaiI	CAGNNNCTG	1 cut(s)	1441
Cfr10I	RCCGGY	1 cut(s)	1124
Cfr13I	GGNCC	7 cut(s)	214, 551, 750, 817, 917, 1119, 1127
CseI	GACGC	1 cut(s)	291
Csp6I	GTAC	2 cut(s)	541, 595
CviAII	CATG	5 cut(s)	151, 211, 457, 955, 1303
CviQI	GTAC	2 cut(s)	541, 595
DdeI	CTNAG	3 cut(s)	1017, 1022, 1155
DpnI	GATC	7 cut(s)	91, 476, 559, 777, 840, 1223, 1251
DpnII	GATC	7 cut(s)	89, 474, 557, 775, 838, 1221, 1249
DrdI	GACNNNNNNGTC	1 cut(s)	934
DseDI	GACNNNNNNGTC	1 cut(s)	934
EaeI	YGGCCR	2 cut(s)	363, 957
EagI	CGGCCG	1 cut(s)	363
Eam1104I	CTCTTC	5 cut(s)	307, 465, 681, 713, 807
EarI	CTCTTC	5 cut(s)	307, 465, 681, 713, 807
EciI	GGCGGA	1 cut(s)	154
Ecl136II	GAGCTC	1 cut(s)	589
EclXI	CGGCCG	1 cut(s)	363
Eco130I	CCWWGG	5 cut(s)	210, 246, 456, 954, 1351
Eco24I	GRGCYC	1 cut(s)	591
Eco31I	GGTCTC	3 cut(s)	344, 523, 1467
Eco32I	GATATC	1 cut(s)	979
Eco47I	GGWCC	2 cut(s)	214, 750
Eco52I	CGGCCG	1 cut(s)	363
Eco53kI	GAGCTC	1 cut(s)	589
Eco57I	CTGAAG	2 cut(s)	1463, 1479
Eco72I	CACGTG	1 cut(s)	756
EcoICRI	GAGCTC	1 cut(s)	589
EcoRII	CCWGG	4 cut(s)	553, 922, 1115, 1276
EcoRV	GATATC	1 cut(s)	979
EcoT14I	CCWWGG	5 cut(s)	210, 246, 456, 954, 1351
EcoT38I	GRGCYC	1 cut(s)	591
ErhI	CCWWGG	5 cut(s)	210, 246, 456, 954, 1351
FaeI	CATG	5 cut(s)	154, 214, 460, 958, 1306
FalI	AAGNNNNNCTT	4 cut(s)	926, 958, 1239, 1271
FaqI	GGGAC	1 cut(s)	940
FatI	CATG	5 cut(s)	150, 210, 456, 954, 1302
FauI	CCCGC	2 cut(s)	82, 790
Fnu4HI	GCNGC	6 cut(s)	189, 201, 366, 951, 1122, 1521
FokI	GGATG	3 cut(s)	821, 1283, 1301
FriOI	GRGCYC	1 cut(s)	591
Fsp4HI	GCNGC	6 cut(s)	189, 201, 366, 951, 1122, 1521
FspBI	CTAG	1 cut(s)	317
GluI	GCNGC	6 cut(s)	189, 201, 366, 951, 1122, 1521
GsuI	CTGGAG	1 cut(s)	488
HaeIII	GGCC	9 cut(s)	191, 365, 552, 671, 818, 919, 959, 1121, 1128
HapII	CCGG	4 cut(s)	346, 592, 1125, 1418
HgaI	GACGC	1 cut(s)	291
Hin1I	GRCGYC	1 cut(s)	252
Hin1II	CATG	5 cut(s)	154, 214, 460, 958, 1306
HincII	GTYRAC	2 cut(s)	10, 183
HindII	GTYRAC	2 cut(s)	10, 183
HinfI	GANTC	9 cut(s)	11, 19, 417, 495, 569, 733, 1057, 1162, 1259
HpaII	CCGG	4 cut(s)	346, 592, 1125, 1418
HphI	GGTGA	3 cut(s)	304, 770, 1171
Hpy166II	GTNNAC	9 cut(s)	10, 183, 256, 376, 573, 753, 769, 1041, 1294
Hpy188I	TCNGA	6 cut(s)	281, 416, 562, 586, 1149, 1534
Hpy188III	TCNNGA	5 cut(s)	87, 233, 842, 1024, 1170
Hpy8I	GTNNAC	9 cut(s)	10, 183, 256, 376, 573, 753, 769, 1041, 1294
Hpy99I	CGWCG	5 cut(s)	200, 329, 494, 790, 1217
HpyAV	CCTTC	6 cut(s)	723, 856, 871, 880, 1402, 1454
HpyCH4III	ACNGT	3 cut(s)	175, 577, 1197
HpyCH4IV	ACGT	4 cut(s)	137, 252, 755, 788
HpyCH4V	TGCA	7 cut(s)	25, 664, 1109, 1294, 1314, 1466, 1523
HpyF10VI	GCNNNNNNNGC	7 cut(s)	197, 206, 304, 916, 956, 1121, 1142
HpyF3I	CTNAG	3 cut(s)	1017, 1022, 1155
HpySE526I	ACGT	4 cut(s)	137, 252, 755, 788
Hsp92I	GRCGYC	1 cut(s)	252
Hsp92II	CATG	5 cut(s)	154, 214, 460, 958, 1306
KroI	GCCGGC	1 cut(s)	1124
KroNI	GCCGGC	1 cut(s)	1126
Kzo9I	GATC	7 cut(s)	89, 474, 557, 775, 838, 1221, 1249
LguI	GCTCTTC	1 cut(s)	713
LmnI	GCTCC	7 cut(s)	227, 586, 594, 1088, 1150, 1363, 1453
Lsp1109I	GCAGC	2 cut(s)	937, 1507
MaeI	CTAG	1 cut(s)	317
MaeII	ACGT	4 cut(s)	137, 252, 755, 788
MaeIII	GTNAC	5 cut(s)	418, 1159, 1269, 1411, 1437
MalI	GATC	7 cut(s)	91, 476, 559, 777, 840, 1223, 1251
MbiI	CCGCTC	2 cut(s)	222, 1219
MboI	GATC	7 cut(s)	89, 474, 557, 775, 838, 1221, 1249
MfeI	CAATTG	1 cut(s)	1509
MflI	RGATCY	2 cut(s)	557, 838
MhlI	GDGCHC	4 cut(s)	591, 1296, 1368, 1544
MlsI	TGGCCA	1 cut(s)	959
MluNI	TGGCCA	1 cut(s)	959
MlyI	GAGTC	7 cut(s)	5, 13, 426, 504, 578, 1156, 1253
MmeI	TCCRAC	2 cut(s)	124, 564
Mox20I	TGGCCA	1 cut(s)	959
MroNI	GCCGGC	1 cut(s)	1124
MroXI	GAANNNNTTC	2 cut(s)	137, 707
MscI	TGGCCA	1 cut(s)	959
MseI	TTAA	4 cut(s)	144, 287, 681, 1140
MslI	CAYNNNNRTG	4 cut(s)	128, 155, 209, 1301
Msp20I	TGGCCA	1 cut(s)	959
MspI	CCGG	4 cut(s)	346, 592, 1125, 1418
MspR9I	CCNGG	4 cut(s)	555, 924, 1117, 1278
MunI	CAATTG	1 cut(s)	1509
MvaI	CCWGG	4 cut(s)	555, 924, 1117, 1278
MvnI	CGCG	2 cut(s)	234, 785
MwoI	GCNNNNNNNGC	7 cut(s)	197, 206, 304, 916, 956, 1121, 1142
NaeI	GCCGGC	1 cut(s)	1126
NcoI	CCATGG	3 cut(s)	210, 456, 954
NdeII	GATC	7 cut(s)	89, 474, 557, 775, 838, 1221, 1249
NgoMIV	GCCGGC	1 cut(s)	1124
NlaIII	CATG	5 cut(s)	154, 214, 460, 958, 1306
NlaIV	GGNNCC	4 cut(s)	350, 559, 751, 1455
NmeAIII	GCCGAG	1 cut(s)	697
NmuCI	GTSAC	2 cut(s)	418, 1159
NruI	TCGCGA	1 cut(s)	234
NspI	RCATGY	1 cut(s)	1306
PciI	ACATGT	1 cut(s)	1302
PciSI	GCTCTTC	1 cut(s)	713
PcsI	WCGNNNNNNNCGW	2 cut(s)	330, 1279
PdiI	GCCGGC	1 cut(s)	1126
PdmI	GAANNNNTTC	2 cut(s)	137, 707
PfeI	GAWTC	2 cut(s)	733, 1057
PflFI	GACNNNGTC	2 cut(s)	494, 1165
PkrI	GCNGC	6 cut(s)	190, 202, 367, 952, 1123, 1522
PleI	GAGTC	7 cut(s)	5, 13, 425, 503, 577, 1156, 1253
PmaCI	CACGTG	1 cut(s)	756
PmlI	CACGTG	1 cut(s)	756
PpsI	GAGTC	7 cut(s)	5, 13, 425, 503, 577, 1156, 1253
Ppu21I	YACGTR	1 cut(s)	756
PscI	ACATGT	1 cut(s)	1302
PshAI	GACNNNNGTC	1 cut(s)	1198
Psp124BI	GAGCTC	1 cut(s)	591
Psp6I	CCWGG	4 cut(s)	553, 922, 1115, 1276
PspCI	CACGTG	1 cut(s)	756
PspGI	CCWGG	4 cut(s)	553, 922, 1115, 1276
PspN4I	GGNNCC	4 cut(s)	350, 559, 751, 1455
PspPI	GGNCC	7 cut(s)	214, 551, 750, 817, 917, 1119, 1127
PstNI	CAGNNNCTG	1 cut(s)	1441
PsuI	RGATCY	2 cut(s)	557, 838
PsyI	GACNNNGTC	2 cut(s)	494, 1165
RruI	TCGCGA	1 cut(s)	234
RsaI	GTAC	2 cut(s)	542, 596
RsaNI	GTAC	2 cut(s)	541, 595
RseI	CAYNNNNRTG	4 cut(s)	128, 155, 209, 1301
SacI	GAGCTC	1 cut(s)	591
SapI	GCTCTTC	1 cut(s)	713
SaqAI	TTAA	4 cut(s)	144, 287, 681, 1140
SatI	GCNGC	6 cut(s)	189, 201, 366, 951, 1122, 1521
Sau3AI	GATC	7 cut(s)	89, 474, 557, 775, 838, 1221, 1249
Sau96I	GGNCC	7 cut(s)	214, 551, 750, 817, 917, 1119, 1127
SchI	GAGTC	7 cut(s)	5, 13, 426, 504, 578, 1156, 1253
ScrFI	CCNGG	4 cut(s)	555, 924, 1117, 1278
SduI	GDGCHC	4 cut(s)	591, 1296, 1368, 1544
SfcI	CTRYAG	1 cut(s)	1094
SinI	GGWCC	2 cut(s)	214, 750
SmiMI	CAYNNNNRTG	4 cut(s)	128, 155, 209, 1301
SmlI	CTYRAG	3 cut(s)	842, 1481, 1490
SmoI	CTYRAG	3 cut(s)	842, 1481, 1490
SspMI	CTAG	1 cut(s)	317
SstI	GAGCTC	1 cut(s)	591
StyD4I	CCNGG	4 cut(s)	553, 922, 1115, 1276
StyI	CCWWGG	5 cut(s)	210, 246, 456, 954, 1351
TaaI	ACNGT	3 cut(s)	175, 577, 1197
TaiI	ACGT	4 cut(s)	140, 255, 758, 791
TaqI	TCGA	9 cut(s)	324, 333, 489, 736, 774, 792, 938, 1055, 1282
TatI	WGTACW	1 cut(s)	540
TauI	GCSGC	4 cut(s)	191, 203, 368, 1124
TfiI	GAWTC	2 cut(s)	733, 1057
Tru1I	TTAA	4 cut(s)	144, 287, 681, 1140
Tru9I	TTAA	4 cut(s)	144, 287, 681, 1140
TscAI	CASTG	3 cut(s)	180, 512, 771
TseFI	GTSAC	2 cut(s)	418, 1159
TseI	GCWGC	2 cut(s)	950, 1520
Tsp45I	GTSAC	2 cut(s)	418, 1159
TspDTI	ATGAA	6 cut(s)	146, 229, 305, 825, 1174, 1421
TspGWI	ACGGA	3 cut(s)	184, 439, 507
TspRI	CASTG	3 cut(s)	180, 512, 771
Tth111I	GACNNNGTC	2 cut(s)	494, 1165
VneI	GTGCAC	1 cut(s)	1292
VpaK11BI	GGWCC	2 cut(s)	214, 750
XapI	RAATTY	4 cut(s)	112, 400, 444, 970
XceI	RCATGY	1 cut(s)	1306
XmnI	GAANNNNTTC	2 cut(s)	137, 707
XspI	CTAG	1 cut(s)	317
ZraI	GACGTC	1 cut(s)	253

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.