Rmu_co8369919.1_g000001

MLO-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8369919.1
OG0001802
Physical Location & Seq
Reverse (-)
224 .. 1118
895 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8369919.1_g000001.1.cds

Sequence Viewer

Length: 471 bp
aatgcatttgagcttgccttcttcgtttgggttacagcccaatttggagtaggatcatgctaccacgagcacacctcgatcattgttacaagagttttcttagcggtgaccacccaagtcctctgcagctacattactcttcctctgtatgcacttgtaacacagatgggttcacaattcaagggtaagatactagaagataacatggctggcattctaaagcaatggcacagtgatgtgaggcggagaaggaagagggaagaacaagaatcacaatctgcacgcacgtctttttccatggaatggagctctgtgaggcacagcatttcttcttatatgagaccaagcacttccagacgaggtgaaaatgccgatttttctaacagatgggataacaaggaccagacagtagaattagaagaaagctcctcatcaaggggtcacagaagaaatagtgattatgggacgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0016020 GO:0044464 GO:0050896 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mlo

Protein Analysis

156

Amino Acids

18.01

Weight (kDa)

9.03

Isoelectric Point (pI)

63.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 303
AciI CCGC 2 cut(s) 104, 244
AclWI GGATC 1 cut(s) 61
AfiI CCNNNNNNNGG 2 cut(s) 303, 435
AgsI TTSAA 1 cut(s) 181
AjiI CACGTC 2 cut(s) 288, 468
AluBI AGCT 4 cut(s) 13, 129, 309, 426
AluI AGCT 4 cut(s) 13, 129, 309, 426
Alw21I GWGCWC 2 cut(s) 72, 311
Alw26I GTCTC 1 cut(s) 334
AlwI GGATC 1 cut(s) 61
ApeKI GCWGC 1 cut(s) 126
AspS9I GGNCC 1 cut(s) 400
AsuHPI GGTGA 2 cut(s) 118, 374
AvaII GGWCC 1 cut(s) 400
BanII GRGCYC 1 cut(s) 311
BauI CACGAG 1 cut(s) 65
Bbv12I GWGCWC 2 cut(s) 72, 311
BbvI GCAGC 1 cut(s) 138
BccI CCATC 2 cut(s) 160, 381
BcoDI GTCTC 1 cut(s) 334
BfaI CTAG 1 cut(s) 194
BfmI CTRYAG 1 cut(s) 124
BisI GCNGC 1 cut(s) 127
BlsI GCNGC 1 cut(s) 128
Bme18I GGWCC 1 cut(s) 400
BmgBI CACGTC 2 cut(s) 288, 468
BmgT120I GGNCC 1 cut(s) 400
BplI GAGNNNNNCTC 2 cut(s) 59, 91
BsaI GGTCTC 1 cut(s) 334
BsaJI CCNNGG 1 cut(s) 297
Bsc4I CCNNNNNNNGG 2 cut(s) 303, 435
Bse3DI GCAATG 1 cut(s) 230
BseDI CCNNGG 1 cut(s) 297
BseLI CCNNNNNNNGG 2 cut(s) 303, 435
BseMI GCAATG 1 cut(s) 230
BseRI GAGGAG 1 cut(s) 418
BseXI GCAGC 1 cut(s) 138
BsgI GTGCAG 1 cut(s) 264
BsiHKAI GWGCWC 2 cut(s) 72, 311
BslI CCNNNNNNNGG 2 cut(s) 303, 435
BsmAI GTCTC 1 cut(s) 334
BsmI GAATGC 1 cut(s) 213
Bso31I GGTCTC 1 cut(s) 334
Bsp1286I GDGCHC 2 cut(s) 72, 311
Bsp143I GATC 2 cut(s) 53, 78
Bsp19I CCATGG 1 cut(s) 297
BspACI CCGC 2 cut(s) 104, 244
BspMAI CTGCAG 1 cut(s) 128
BspPI GGATC 1 cut(s) 61
BspTNI GGTCTC 1 cut(s) 334
BsrDI GCAATG 1 cut(s) 230
BssECI CCNNGG 1 cut(s) 297
BssMI GATC 2 cut(s) 53, 78
BssSI CACGAG 1 cut(s) 65
BssT1I CCWWGG 1 cut(s) 297
Bst2BI CACGAG 1 cut(s) 65
Bst4CI ACNGT 2 cut(s) 233, 409
Bst6I CTCTTC 2 cut(s) 144, 248
BstC8I GCNNGC 3 cut(s) 15, 211, 283
BstDEI CTNAG 1 cut(s) 100
BstDSI CCRYGG 1 cut(s) 297
BstEII GGTNACC 1 cut(s) 106
BstENI CCTNNNNNAGG 1 cut(s) 433
BstKTI GATC 2 cut(s) 56, 81
BstMAI GTCTC 1 cut(s) 334
BstMBI GATC 2 cut(s) 53, 78
BstPI GGTNACC 1 cut(s) 106
BstSFI CTRYAG 1 cut(s) 124
BstV1I GCAGC 1 cut(s) 138
BtgI CCRYGG 1 cut(s) 297
BtrI CACGTC 2 cut(s) 288, 468
BtsIMutI CAGTG 1 cut(s) 238
Cac8I GCNNGC 3 cut(s) 15, 211, 283
Cfr13I GGNCC 1 cut(s) 400
CviAII CATG 3 cut(s) 57, 205, 298
CviJI RGCY 6 cut(s) 13, 38, 129, 209, 309, 426
CviKI_1 RGCY 6 cut(s) 13, 38, 129, 209, 309, 426
DdeI CTNAG 1 cut(s) 100
DpnI GATC 2 cut(s) 55, 80
DpnII GATC 2 cut(s) 53, 78
Eam1104I CTCTTC 2 cut(s) 144, 248
EarI CTCTTC 2 cut(s) 144, 248
EciI GGCGGA 1 cut(s) 259
Ecl136II GAGCTC 1 cut(s) 309
Eco130I CCWWGG 1 cut(s) 297
Eco24I GRGCYC 1 cut(s) 311
Eco31I GGTCTC 1 cut(s) 334
Eco47I GGWCC 1 cut(s) 400
Eco53kI GAGCTC 1 cut(s) 309
Eco91I GGTNACC 1 cut(s) 106
EcoICRI GAGCTC 1 cut(s) 309
EcoNI CCTNNNNNAGG 1 cut(s) 433
EcoO65I GGTNACC 1 cut(s) 106
EcoT14I CCWWGG 1 cut(s) 297
EcoT22I ATGCAT 1 cut(s) 7
EcoT38I GRGCYC 1 cut(s) 311
ErhI CCWWGG 1 cut(s) 297
FaeI CATG 3 cut(s) 60, 208, 301
FaiI YATR 7 cut(s) 58, 150, 206, 299, 336, 338, 462
FatI CATG 3 cut(s) 56, 204, 297
Fnu4HI GCNGC 1 cut(s) 127
FriOI GRGCYC 1 cut(s) 311
Fsp4HI GCNGC 1 cut(s) 127
FspBI CTAG 1 cut(s) 194
GluI GCNGC 1 cut(s) 127
Hin1II CATG 3 cut(s) 60, 208, 301
HinfI GANTC 1 cut(s) 269
HphI GGTGA 2 cut(s) 118, 374
Hpy166II GTNNAC 1 cut(s) 173
Hpy188III TCNNGA 1 cut(s) 354
Hpy8I GTNNAC 1 cut(s) 173
HpyAV CCTTC 2 cut(s) 28, 243
HpyCH4III ACNGT 2 cut(s) 233, 409
HpyCH4IV ACGT 2 cut(s) 287, 467
HpyCH4V TGCA 4 cut(s) 5, 126, 152, 281
HpyF3I CTNAG 1 cut(s) 100
HpySE526I ACGT 2 cut(s) 287, 467
Hsp92II CATG 3 cut(s) 60, 208, 301
Kzo9I GATC 2 cut(s) 53, 78
LmnI GCTCC 2 cut(s) 306, 431
LpnPI CCDG 3 cut(s) 195, 367, 416
Lsp1109I GCAGC 1 cut(s) 138
MaeI CTAG 1 cut(s) 194
MaeII ACGT 2 cut(s) 287, 467
MaeIII GTNAC 5 cut(s) 31, 85, 106, 157, 440
MalI GATC 2 cut(s) 55, 80
MboI GATC 2 cut(s) 53, 78
MboII GAAGA 8 cut(s) 13, 131, 209, 265, 272, 321, 431, 459
MhlI GDGCHC 2 cut(s) 72, 311
MluCI AATT 3 cut(s) 41, 176, 413
MnlI CCTC 8 cut(s) 85, 131, 153, 234, 249, 309, 353, 439
Mph1103I ATGCAT 1 cut(s) 7
MslI CAYNNNNRTG 1 cut(s) 234
Mva1269I GAATGC 1 cut(s) 213
NcoI CCATGG 1 cut(s) 297
NdeII GATC 2 cut(s) 53, 78
NlaIII CATG 3 cut(s) 60, 208, 301
NmuCI GTSAC 2 cut(s) 106, 440
NsiI ATGCAT 1 cut(s) 7
PctI GAATGC 1 cut(s) 213
PfeI GAWTC 1 cut(s) 269
PflMI CCANNNNNTGG 1 cut(s) 303
PkrI GCNGC 1 cut(s) 128
Psp124BI GAGCTC 1 cut(s) 311
PspEI GGTNACC 1 cut(s) 106
PspPI GGNCC 1 cut(s) 400
PstI CTGCAG 1 cut(s) 128
RseI CAYNNNNRTG 1 cut(s) 234
SacI GAGCTC 1 cut(s) 311
SatI GCNGC 1 cut(s) 127
Sau3AI GATC 2 cut(s) 53, 78
Sau96I GGNCC 1 cut(s) 400
SduI GDGCHC 2 cut(s) 72, 311
SetI ASST 8 cut(s) 15, 77, 131, 290, 311, 364, 428, 470
SfcI CTRYAG 1 cut(s) 124
SinI GGWCC 1 cut(s) 400
SmiMI CAYNNNNRTG 1 cut(s) 234
Sse9I AATT 3 cut(s) 41, 176, 413
SsiI CCGC 2 cut(s) 104, 244
SspMI CTAG 1 cut(s) 194
SstI GAGCTC 1 cut(s) 311
StyI CCWWGG 1 cut(s) 297
TaaI ACNGT 2 cut(s) 233, 409
TaiI ACGT 2 cut(s) 290, 470
TaqI TCGA 1 cut(s) 77
TasI AATT 3 cut(s) 41, 176, 413
TfiI GAWTC 1 cut(s) 269
TscAI CASTG 1 cut(s) 238
TseFI GTSAC 2 cut(s) 106, 440
TseI GCWGC 1 cut(s) 126
Tsp45I GTSAC 2 cut(s) 106, 440
TspRI CASTG 1 cut(s) 238
Van91I CCANNNNNTGG 1 cut(s) 303
VpaK11BI GGWCC 1 cut(s) 400
XagI CCTNNNNNAGG 1 cut(s) 433
XspI CTAG 1 cut(s) 194
Zsp2I ATGCAT 1 cut(s) 7
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.