Rh1AG232600

NEDD8-activating enzyme E1 catalytic

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
44214326 .. 44214670
345 bp
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UTR
Exon/CDS
Intron
Rh1AG232600.1

Sequence Viewer

Length: 345 bp
ATGATGCCTATTAGATCTCATTCTGCGAATGACTTGCTTTTACTGTACTACTATGCTTTGGCTAATGTGGGTGGTTTAATTTTTCTTCTGACAGAGTATGATGCTGATGATAAACCCCAAGAAGAAACTGTCAACCCTATGGTCGATGGTGGGACTGAAGGTTTTCAAGGACATGCCAGGGTCATTATGCCAGGGATATCAGTCCATGCATGCTTTGAGTGTACAATCTGGCTTTTCCCCCCTCAAGTGAAGTTCCCTTTATGCACACTTGCAGAAATCCCTAGAACTGCTGCTCATTGTATTGAATATGCTCACCTAATTAAATGGGATGAGGTCATGGATTAG

Protein Analysis

114

Amino Acids

12.83

Weight (kDa)

4.74

Isoelectric Point (pI)

57.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 2 cut(s) 47, 223
AgsI TTSAA 2 cut(s) 167, 305
AjnI CCWGG 2 cut(s) 176, 190
ApeKI GCWGC 1 cut(s) 290
Asp700I GAANNNNTTC 1 cut(s) 162
AsuHPI GGTGA 1 cut(s) 305
BbvI GCAGC 1 cut(s) 277
BccI CCATC 1 cut(s) 140
BcgI CGANNNNNNTGC 2 cut(s) 16, 50
BciT130I CCWGG 2 cut(s) 178, 192
BfaI CTAG 1 cut(s) 282
BglII AGATCT 1 cut(s) 14
BisI GCNGC 1 cut(s) 291
BlsI GCNGC 1 cut(s) 292
Bme1390I CCNGG 2 cut(s) 178, 192
BmrFI CCNGG 2 cut(s) 178, 192
BmsI GCATC 1 cut(s) 91
BpuEI CTTGAG 1 cut(s) 228
BsaJI CCNNGG 2 cut(s) 177, 191
BseBI CCWGG 2 cut(s) 178, 192
BseDI CCNNGG 2 cut(s) 177, 191
BseGI GGATG 1 cut(s) 334
BseXI GCAGC 1 cut(s) 277
BslFI GGGAC 1 cut(s) 166
BsmFI GGGAC 1 cut(s) 166
Bsp1407I TGTACA 1 cut(s) 221
Bsp143I GATC 1 cut(s) 14
BsrGI TGTACA 1 cut(s) 221
BssECI CCNNGG 2 cut(s) 177, 191
BssMI GATC 1 cut(s) 14
Bst2UI CCWGG 2 cut(s) 178, 192
Bst4CI ACNGT 2 cut(s) 45, 130
BstAUI TGTACA 1 cut(s) 221
BstC8I GCNNGC 1 cut(s) 211
BstF5I GGATG 1 cut(s) 334
BstKTI GATC 1 cut(s) 17
BstMBI GATC 1 cut(s) 14
BstNI CCWGG 2 cut(s) 178, 192
BstNSI RCATGY 2 cut(s) 176, 213
BstSCI CCNGG 2 cut(s) 176, 190
BstV1I GCAGC 1 cut(s) 277
BstX2I RGATCY 1 cut(s) 14
BstYI RGATCY 1 cut(s) 14
BtsCI GGATG 1 cut(s) 334
Cac8I GCNNGC 1 cut(s) 211
Csp6I GTAC 2 cut(s) 46, 222
CviAII CATG 4 cut(s) 173, 206, 210, 337
CviJI RGCY 2 cut(s) 62, 232
CviKI_1 RGCY 2 cut(s) 62, 232
CviQI GTAC 2 cut(s) 46, 222
DpnI GATC 1 cut(s) 16
DpnII GATC 1 cut(s) 14
Eco32I GATATC 1 cut(s) 198
Eco57I CTGAAG 1 cut(s) 177
EcoRII CCWGG 2 cut(s) 176, 190
EcoRV GATATC 1 cut(s) 198
EcoT22I ATGCAT 1 cut(s) 211
FaeI CATG 4 cut(s) 176, 209, 213, 340
FaqI GGGAC 1 cut(s) 166
FatI CATG 4 cut(s) 172, 205, 209, 336
Fnu4HI GCNGC 1 cut(s) 291
FokI GGATG 1 cut(s) 341
Fsp4HI GCNGC 1 cut(s) 291
FspBI CTAG 1 cut(s) 282
GluI GCNGC 1 cut(s) 291
Hin1II CATG 4 cut(s) 176, 209, 213, 340
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HphI GGTGA 1 cut(s) 305
Hpy166II GTNNAC 2 cut(s) 133, 222
Hpy188I TCNGA 1 cut(s) 90
Hpy8I GTNNAC 2 cut(s) 133, 222
HpyAV CCTTC 1 cut(s) 152
HpyCH4III ACNGT 2 cut(s) 45, 130
HpyCH4V TGCA 3 cut(s) 209, 264, 272
Hsp92II CATG 4 cut(s) 176, 209, 213, 340
Kzo9I GATC 1 cut(s) 14
LpnPI CCDG 5 cut(s) 163, 177, 190, 204, 214
Lsp1109I GCAGC 1 cut(s) 277
LweI GCATC 1 cut(s) 91
MaeI CTAG 1 cut(s) 282
MalI GATC 1 cut(s) 16
MboI GATC 1 cut(s) 14
MboII GAAGA 2 cut(s) 77, 134
MflI RGATCY 1 cut(s) 14
MluCI AATT 2 cut(s) 78, 318
MnlI CCTC 2 cut(s) 252, 325
Mph1103I ATGCAT 1 cut(s) 211
MroXI GAANNNNTTC 1 cut(s) 162
MseI TTAA 2 cut(s) 77, 321
MspR9I CCNGG 2 cut(s) 178, 192
MvaI CCWGG 2 cut(s) 178, 192
NdeII GATC 1 cut(s) 14
NlaIII CATG 4 cut(s) 176, 209, 213, 340
NsiI ATGCAT 1 cut(s) 211
NspI RCATGY 2 cut(s) 176, 213
PaeI GCATGC 1 cut(s) 213
PdmI GAANNNNTTC 1 cut(s) 162
PkrI GCNGC 1 cut(s) 292
Psp6I CCWGG 2 cut(s) 176, 190
PspGI CCWGG 2 cut(s) 176, 190
PsuI RGATCY 1 cut(s) 14
RsaI GTAC 2 cut(s) 47, 223
RsaNI GTAC 2 cut(s) 46, 222
SaqAI TTAA 2 cut(s) 77, 321
SatI GCNGC 1 cut(s) 291
Sau3AI GATC 1 cut(s) 14
ScrFI CCNGG 2 cut(s) 178, 192
SetI ASST 3 cut(s) 163, 318, 336
SfaNI GCATC 1 cut(s) 91
SmlI CTYRAG 1 cut(s) 243
SmoI CTYRAG 1 cut(s) 243
SphI GCATGC 1 cut(s) 213
Sse9I AATT 2 cut(s) 78, 318
SspMI CTAG 1 cut(s) 282
StyD4I CCNGG 2 cut(s) 176, 190
TaaI ACNGT 2 cut(s) 45, 130
TaqI TCGA 1 cut(s) 144
TasI AATT 2 cut(s) 78, 318
TatI WGTACW 2 cut(s) 45, 221
Tru1I TTAA 2 cut(s) 77, 321
Tru9I TTAA 2 cut(s) 77, 321
TseI GCWGC 1 cut(s) 290
XceI RCATGY 2 cut(s) 176, 213
XmnI GAANNNNTTC 1 cut(s) 162
XspI CTAG 1 cut(s) 282
Zsp2I ATGCAT 1 cut(s) 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.