Rorug02G0437800

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
56071429 .. 56075122
3694 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0437800.1

Sequence Viewer

Length: 1200 bp
ATGGGGATCATTGAAAGGATCAAAGAAATCGAGGCCGAAATGGCTCGGACTCAGAAAAACAAAGCCACAGAGTACCATCTCGGTCAGCTCAAGGCGAAGATTGCGAAGCTAAGGACTCAGCTGTTGGAGCCTCCAAAAGGTTCTAGTGGAGGTGGAGAGGGTTTCGAAGTTACAAAGTTTGGACACGGTCGTGTTGCCCTAATTGGGTTTCCAAGTGTTGGTAAGTCGACACTTTTGACAATGTTGACGGGGACGCACTCTGAAGCTGCTTCTTATGAGTTCACAACACTTACCTGCATTCCTGGGATTATACACTATAATGATACAAAAATTCAGTTGCTTGATCTTCCTGGAATTATTGAAGGTGCTTCTGAAGGCAAGGGTCGTGGGAGGCAGGTTATTGCTGTTGCAAAGTCATCAGATATTGTGTTAATGGTACTTGATGCCTCAAAAAGTGAAGGTCATCGGCAAATTTTGACAAAGGAGCTGGAAGCTGTGGGTTTGCGTTTAAACAAGAGACCACCACAAATATATTTCAAAAAGAAAAAAACCGGAGGCATTTCTTTTAACAGCACTCTCACTTTAACTCATGTGGACGAGAAGCTTTGTTATCAAATTCTGCACGAATACAAAATTCACAATGCTGAGTTGCTGTTTCGTGAGGATGCCACAGTGGATGATCTTATCGATGTAATTGAGGGTAACAGAAAATACATGAAGTGTGTATATGTATACAACAAGATAGATGTTATTGGTATTGATGATGTGGACAAATTAGCCCGGCAACCTAATTCTATTGTCATTAGCTGCAATCTGAAGCTGAACTTAGACAGACTACTCGCGAAGATGTGGGAGGAGATGGGACTTGTTAGAGTTTATACAAAGCCACAGGGCCAGCAACCTGATTTTGGTGATCCTGTGGTTCTTTCTGCTGATAGAGGTGGCTGCACAGTCGAGGACTTTTGTAACCATATCCACAGGAGTCTGCTGAAGGAGGTAAAATATGTGCTGGTGTGGGGTACAAGTGCAAGGCATTACCCTCAGCATTGTGGTGTCAGTCACCTTCTTAATGATGAAGACGTGGTTCAGATTGTAAAGAAAAAGGAGAAAGAAGGGGAAGGGAGGGGTCGGTTTAAGTCACATTCGACAGCCCCTGCTCGTATAGCTGACAGAGAGAAGAAGGCTCCCCTGAAACAATAA

Protein Analysis

399

Amino Acids

44.55

Weight (kDa)

9.0

Isoelectric Point (pI)

31.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 64 - 180 8.7e-24 50S ribosome-binding GTPase
FeoB_N PF02421 64 - 159 2.7e-12 Ferrous iron transport protein B
MMR_HSR1_Xtn PF16897 184 - 289 2.2e-41 C-terminal region of MMR_HSR1 domain
TGS PF02824 290 - 366 3e-19 TGS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 302, 385
AccB7I CCANNNNNTGG 1 cut(s) 218
AccI GTMKAC 2 cut(s) 227, 732
AccII CGCG 1 cut(s) 842
AclWI GGATC 3 cut(s) 14, 26, 908
AcsI RAATTY 4 cut(s) 330, 471, 615, 633
AcuI CTGAAG 4 cut(s) 282, 393, 836, 1010
AfaI GTAC 3 cut(s) 74, 438, 1021
AfiI CCNNNNNNNGG 4 cut(s) 137, 204, 218, 908
AgsI TTSAA 3 cut(s) 14, 362, 538
AjiI CACGTC 1 cut(s) 1081
AjnI CCWGG 2 cut(s) 301, 349
AleI CACNNNNGTG 1 cut(s) 189
Alw26I GTCTC 1 cut(s) 511
AlwI GGATC 3 cut(s) 14, 26, 908
AlwNI CAGNNNCTG 1 cut(s) 1154
AoxI GGCC 2 cut(s) 33, 892
ApeKI GCWGC 3 cut(s) 266, 807, 945
ApoI RAATTY 4 cut(s) 330, 471, 615, 633
AspS9I GGNCC 1 cut(s) 892
AsuC2I CCSGG 1 cut(s) 781
AsuHPI GGTGA 2 cut(s) 923, 1052
AsuII TTCGAA 1 cut(s) 165
BbsI GAAGAC 1 cut(s) 1083
BbvCI CCTCAGC 1 cut(s) 1041
BbvI GCAGC 3 cut(s) 253, 794, 932
BccI CCATC 2 cut(s) 84, 853
BciT130I CCWGG 2 cut(s) 303, 351
BcnI CCSGG 1 cut(s) 781
BcoDI GTCTC 1 cut(s) 511
BfaI CTAG 1 cut(s) 144
BfuAI ACCTGC 2 cut(s) 302, 385
BglI GCCNNNNNGGC 1 cut(s) 41
BisI GCNGC 3 cut(s) 267, 808, 946
BlsI GCNGC 3 cut(s) 268, 809, 947
Bme1390I CCNGG 3 cut(s) 303, 351, 781
BmgBI CACGTC 1 cut(s) 1081
BmgT120I GGNCC 1 cut(s) 892
BmiI GGNNCC 2 cut(s) 129, 1185
BmrFI CCNGG 3 cut(s) 303, 351, 781
BmsI GCATC 2 cut(s) 433, 655
BpiI GAAGAC 1 cut(s) 1083
Bpu10I CCTNAGC 2 cut(s) 110, 1041
Bpu14I TTCGAA 1 cut(s) 165
BpuEI CTTGAG 1 cut(s) 74
BpuMI CCSGG 1 cut(s) 781
Bsa29I ATCGAT 1 cut(s) 687
BsaI GGTCTC 1 cut(s) 511
BsaJI CCNNGG 1 cut(s) 302
BsaWI WCCGGW 1 cut(s) 551
Bsc4I CCNNNNNNNGG 4 cut(s) 137, 204, 218, 908
BseBI CCWGG 2 cut(s) 303, 351
BseCI ATCGAT 1 cut(s) 687
BseDI CCNNGG 1 cut(s) 302
BseGI GGATG 2 cut(s) 670, 682
BseLI CCNNNNNNNGG 4 cut(s) 137, 204, 218, 908
BseMII CTCAG 4 cut(s) 65, 131, 636, 1055
BseRI GAGGAG 1 cut(s) 869
BseXI GCAGC 3 cut(s) 253, 794, 932
BsgI GTGCAG 2 cut(s) 605, 931
Bsh1236I CGCG 1 cut(s) 842
Bsh1285I CGRYCG 1 cut(s) 190
BshFI GGCC 2 cut(s) 35, 894
BshVI ATCGAT 1 cut(s) 687
BsiEI CGRYCG 1 cut(s) 190
BsiSI CCGG 2 cut(s) 552, 781
BslFI GGGAC 2 cut(s) 265, 876
BslI CCNNNNNNNGG 4 cut(s) 137, 204, 218, 908
BsmAI GTCTC 1 cut(s) 511
BsmFI GGGAC 2 cut(s) 265, 876
BsmI GAATGC 1 cut(s) 297
BsnI GGCC 2 cut(s) 35, 894
Bso31I GGTCTC 1 cut(s) 511
Bsp119I TTCGAA 1 cut(s) 165
Bsp143I GATC 5 cut(s) 6, 18, 343, 679, 913
Bsp68I TCGCGA 1 cut(s) 842
BspANI GGCC 2 cut(s) 35, 894
BspCNI CTCAG 4 cut(s) 64, 130, 637, 1054
BspDI ATCGAT 1 cut(s) 687
BspFNI CGCG 1 cut(s) 842
BspLI GGNNCC 2 cut(s) 129, 1185
BspMI ACCTGC 2 cut(s) 302, 385
BspPI GGATC 3 cut(s) 14, 26, 908
BspT104I TTCGAA 1 cut(s) 165
BspTNI GGTCTC 1 cut(s) 511
BssECI CCNNGG 1 cut(s) 302
BssMI GATC 5 cut(s) 6, 18, 343, 679, 913
BssNAI GTATAC 1 cut(s) 733
Bst1107I GTATAC 1 cut(s) 733
Bst2UI CCWGG 2 cut(s) 303, 351
Bst4CI ACNGT 3 cut(s) 188, 673, 952
BstBI TTCGAA 1 cut(s) 165
BstC8I GCNNGC 1 cut(s) 896
BstDEI CTNAG 6 cut(s) 51, 110, 117, 645, 826, 1041
BstENI CCTNNNNNAGG 1 cut(s) 135
BstF5I GGATG 2 cut(s) 670, 682
BstFNI CGCG 1 cut(s) 842
BstKTI GATC 5 cut(s) 9, 21, 346, 682, 916
BstMAI GTCTC 1 cut(s) 511
BstMBI GATC 5 cut(s) 6, 18, 343, 679, 913
BstMCI CGRYCG 1 cut(s) 190
BstMWI GCNNNNNNNGC 4 cut(s) 41, 101, 127, 1163
BstNI CCWGG 2 cut(s) 303, 351
BstSCI CCNGG 3 cut(s) 301, 349, 779
BstUI CGCG 1 cut(s) 842
BstV1I GCAGC 3 cut(s) 253, 794, 932
BstV2I GAAGAC 1 cut(s) 1083
BstZ17I GTATAC 1 cut(s) 733
Bsu15I ATCGAT 1 cut(s) 687
BsuRI GGCC 2 cut(s) 35, 894
BsuTUI ATCGAT 1 cut(s) 687
BtrI CACGTC 1 cut(s) 1081
BtsCI GGATG 2 cut(s) 670, 682
BtsIMutI CAGTG 1 cut(s) 678
BtuMI TCGCGA 1 cut(s) 842
BveI ACCTGC 2 cut(s) 302, 385
Cac8I GCNNGC 1 cut(s) 896
CaiI CAGNNNCTG 1 cut(s) 1154
Cfr13I GGNCC 1 cut(s) 892
ClaI ATCGAT 1 cut(s) 687
CseI GACGC 1 cut(s) 262
Csp6I GTAC 3 cut(s) 73, 437, 1020
CspCI CAANNNNNGTGG 2 cut(s) 367, 402
CviAII CATG 2 cut(s) 590, 715
CviQI GTAC 3 cut(s) 73, 437, 1020
DdeI CTNAG 6 cut(s) 51, 110, 117, 645, 826, 1041
DpnI GATC 5 cut(s) 8, 20, 345, 681, 915
DpnII GATC 5 cut(s) 6, 18, 343, 679, 913
DraI TTTAAA 1 cut(s) 510
Eco31I GGTCTC 1 cut(s) 511
Eco57I CTGAAG 4 cut(s) 282, 393, 836, 1010
EcoNI CCTNNNNNAGG 1 cut(s) 135
EcoRII CCWGG 2 cut(s) 301, 349
FaeI CATG 2 cut(s) 593, 718
FalI AAGNNNNNCTT 2 cut(s) 809, 841
FaqI GGGAC 2 cut(s) 265, 876
FatI CATG 2 cut(s) 589, 714
FblI GTMKAC 2 cut(s) 227, 732
Fnu4HI GCNGC 3 cut(s) 267, 808, 946
FokI GGATG 2 cut(s) 677, 689
Fsp4HI GCNGC 3 cut(s) 267, 808, 946
FspBI CTAG 1 cut(s) 144
GluI GCNGC 3 cut(s) 267, 808, 946
HaeIII GGCC 2 cut(s) 35, 894
HapII CCGG 2 cut(s) 552, 781
HgaI GACGC 1 cut(s) 262
Hin1II CATG 2 cut(s) 593, 718
HincII GTYRAC 2 cut(s) 228, 246
HindII GTYRAC 2 cut(s) 228, 246
HindIII AAGCTT 1 cut(s) 602
HinfI GANTC 3 cut(s) 49, 115, 982
HpaII CCGG 2 cut(s) 552, 781
HphI GGTGA 2 cut(s) 923, 1052
Hpy166II GTNNAC 6 cut(s) 228, 246, 282, 595, 733, 769
Hpy188I TCNGA 7 cut(s) 48, 54, 262, 373, 421, 816, 1089
Hpy188III TCNNGA 2 cut(s) 659, 841
Hpy8I GTNNAC 6 cut(s) 228, 246, 282, 595, 733, 769
HpyAV CCTTC 8 cut(s) 356, 368, 452, 985, 1073, 1106, 1112, 1174
HpyCH4III ACNGT 3 cut(s) 188, 673, 952
HpyCH4IV ACGT 1 cut(s) 1080
HpyCH4V TGCA 6 cut(s) 297, 410, 622, 810, 948, 1028
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 101, 127, 1163
HpyF3I CTNAG 6 cut(s) 51, 110, 117, 645, 826, 1041
HpySE526I ACGT 1 cut(s) 1080
Hsp92II CATG 2 cut(s) 593, 718
Kzo9I GATC 5 cut(s) 6, 18, 343, 679, 913
LmnI GCTCC 3 cut(s) 127, 484, 1189
Lsp1109I GCAGC 3 cut(s) 253, 794, 932
LweI GCATC 2 cut(s) 433, 655
MaeI CTAG 1 cut(s) 144
MaeII ACGT 1 cut(s) 1080
MaeIII GTNAC 5 cut(s) 169, 701, 965, 1058, 1137
MalI GATC 5 cut(s) 8, 20, 345, 681, 915
MboI GATC 5 cut(s) 6, 18, 343, 679, 913
MboII GAAGA 5 cut(s) 109, 338, 856, 1088, 1189
MluCI AATT 9 cut(s) 201, 330, 354, 471, 615, 633, 693, 773, 790
MlyI GAGTC 3 cut(s) 43, 109, 991
MmeI TCCRAC 1 cut(s) 105
MseI TTAA 6 cut(s) 431, 509, 567, 584, 1068, 1134
MslI CAYNNNNRTG 3 cut(s) 189, 318, 1050
MspA1I CMGCKG 1 cut(s) 121
MspI CCGG 2 cut(s) 552, 781
MspR9I CCNGG 3 cut(s) 303, 351, 781
MssI GTTTAAAC 1 cut(s) 510
Mva1269I GAATGC 1 cut(s) 297
MvaI CCWGG 2 cut(s) 303, 351
MvnI CGCG 1 cut(s) 842
MwoI GCNNNNNNNGC 4 cut(s) 41, 101, 127, 1163
NciI CCSGG 1 cut(s) 781
NdeII GATC 5 cut(s) 6, 18, 343, 679, 913
NlaIII CATG 2 cut(s) 593, 718
NlaIV GGNNCC 2 cut(s) 129, 1185
NmuCI GTSAC 2 cut(s) 1058, 1137
NruI TCGCGA 1 cut(s) 842
NspV TTCGAA 1 cut(s) 165
OliI CACNNNNGTG 1 cut(s) 189
PctI GAATGC 1 cut(s) 297
PflFI GACNNNGTC 1 cut(s) 186
PflMI CCANNNNNTGG 1 cut(s) 218
PfoI TCCNGGA 1 cut(s) 349
PkrI GCNGC 3 cut(s) 268, 809, 947
PleI GAGTC 3 cut(s) 43, 109, 990
PmeI GTTTAAAC 1 cut(s) 510
PpsI GAGTC 3 cut(s) 43, 109, 990
Psp6I CCWGG 2 cut(s) 301, 349
PspGI CCWGG 2 cut(s) 301, 349
PspN4I GGNNCC 2 cut(s) 129, 1185
PspPI GGNCC 1 cut(s) 892
PstNI CAGNNNCTG 1 cut(s) 1154
PsyI GACNNNGTC 1 cut(s) 186
PvuII CAGCTG 1 cut(s) 121
RruI TCGCGA 1 cut(s) 842
RsaI GTAC 3 cut(s) 74, 438, 1021
RsaNI GTAC 3 cut(s) 73, 437, 1020
RseI CAYNNNNRTG 3 cut(s) 189, 318, 1050
SalI GTCGAC 1 cut(s) 226
SaqAI TTAA 6 cut(s) 431, 509, 567, 584, 1068, 1134
SatI GCNGC 3 cut(s) 267, 808, 946
Sau3AI GATC 5 cut(s) 6, 18, 343, 679, 913
Sau96I GGNCC 1 cut(s) 892
SchI GAGTC 3 cut(s) 43, 109, 991
ScrFI CCNGG 3 cut(s) 303, 351, 781
SfaNI GCATC 2 cut(s) 433, 655
SfuI TTCGAA 1 cut(s) 165
SmiMI CAYNNNNRTG 3 cut(s) 189, 318, 1050
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
Sse9I AATT 9 cut(s) 201, 330, 354, 471, 615, 633, 693, 773, 790
SspMI CTAG 1 cut(s) 144
StyD4I CCNGG 3 cut(s) 301, 349, 779
TaaI ACNGT 3 cut(s) 188, 673, 952
TaiI ACGT 1 cut(s) 1083
TaqI TCGA 6 cut(s) 30, 165, 227, 687, 954, 1145
TaqII GACCGA 1 cut(s) 71
TasI AATT 9 cut(s) 201, 330, 354, 471, 615, 633, 693, 773, 790
Tru1I TTAA 6 cut(s) 431, 509, 567, 584, 1068, 1134
Tru9I TTAA 6 cut(s) 431, 509, 567, 584, 1068, 1134
TscAI CASTG 1 cut(s) 678
TseFI GTSAC 2 cut(s) 1058, 1137
TseI GCWGC 3 cut(s) 266, 807, 945
Tsp45I GTSAC 2 cut(s) 1058, 1137
TspDTI ATGAA 2 cut(s) 731, 1089
TspRI CASTG 1 cut(s) 678
Tth111I GACNNNGTC 1 cut(s) 186
Van91I CCANNNNNTGG 1 cut(s) 218
XagI CCTNNNNNAGG 1 cut(s) 135
XapI RAATTY 4 cut(s) 330, 471, 615, 633
XmiI GTMKAC 2 cut(s) 227, 732
XspI CTAG 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.