Rorug02G0438100

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
56092979 .. 56095135
2157 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0438100.1

Sequence Viewer

Length: 1125 bp
ATGGTCACATTGACATCTATCAAATTTGAGTCCAAGCAAAATAAGACAACATCTAGAACAGTCAGCTTCAATAAAACTTACCTGAACGAAACAAGCAAATCTGATGGAATATATGAAGATGCTTTTGAGGAATCTACAAGCTGCAAGAAAAGGAAAATAGGAGAGCTGACTCTTGGAACAAATGTTTCATCCTATAATACCGAGGGACATTGCGTTGATAAGTTCAAGCCAGATTATTGGATTTCTCCACGGTCCCCAAGTGAGCTTGATGAAGCTGCCACCAAGCTGCAGAAAGTTTATAAGAGTTACCGGACTAGGAGGAATCTTGCAGATTGCACTGTTATTGTAGGGGAGCTATGGTGGAAGGCATTAGACTTTGCTGCTCTTAGGCAGAGCTCTGTGTCATTTTTTGACTCAGTTAAAGCAGAAACTGCTGTTTCAAGATGGGCACGGGCTAGGACCAGAGCTGCCAAGGTTGGTAAAGGTCTGTCCAAGGATGAGAAGGCCCAGAAGTTAGCTCTAAGACATTGGCTTGAGGCTATTGATCCACGCCATCGTTATGGACAAAATCTGTACTTGTATTATGATGTGTGGTTTAATAGTGGGAGCTTTCAACCTTTCTTCTACTGGTTGGATGTTGGAGATGGCAAAGAAGTGAATCTCGACAAGTGCCCAAGAACTGAACTGCATCATCAATGCATTAAATACCTTGGACCAAAAGAGAGGGATGCTTATGAAGTGATTGTGGAAAGTGGGAAGCTTATGTACAAACAAAGTGGGAACCTTGTGAATACTCCTGAAGGTTCCAAATGGATCTTTGTACTCAGCACATCAAGGAACATGTACGTAGGGGAGAAAAAGAAAGGCCTTTTCCAGCACTCTAGTTTTCTAGCTGGAGGTGCCACCATTGCAGCCGGAAGACTGGTTGCTCTTAATGGGCTTCTTGAGGCTGTATGGTCCTATAGCGGTCATTATCACCCAACAGAAGAGAATTTCATGGAATTCATTAGTTTCTTAGAGGAGCTTCATGTGGACTTGACAGATGTTAAAGTAATTATTCTTAAACATTCATATTCATGGGGTACATTAACTGGCCTATATTTGGTGCTTAAGCTAGAGCAATGA

Protein Analysis

374

Amino Acids

42.77

Weight (kDa)

8.9

Isoelectric Point (pI)

33.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 300
AccB1I GGYRCC 1 cut(s) 899
AciI CCGC 1 cut(s) 966
AclWI GGATC 2 cut(s) 539, 821
AcsI RAATTY 3 cut(s) 23, 991, 1001
AcuI CTGAAG 1 cut(s) 819
AfaI GTAC 5 cut(s) 575, 767, 822, 845, 1084
AfiI CCNNNNNNNGG 1 cut(s) 1102
AflII CTTAAG 1 cut(s) 1109
AflIII ACRYGT 1 cut(s) 840
AgsI TTSAA 4 cut(s) 70, 226, 441, 614
Alw21I GWGCWC 1 cut(s) 398
AlwI GGATC 2 cut(s) 539, 821
AlwNI CAGNNNCTG 1 cut(s) 431
AoxI GGCC 3 cut(s) 504, 865, 1093
ApeKI GCWGC 6 cut(s) 141, 275, 286, 380, 467, 911
ApoI RAATTY 3 cut(s) 23, 991, 1001
AspS9I GGNCC 5 cut(s) 252, 459, 505, 713, 957
AsuHPI GGTGA 1 cut(s) 968
AvaII GGWCC 4 cut(s) 252, 459, 713, 957
BaeGI GKGCMC 2 cut(s) 451, 674
BanI GGYRCC 1 cut(s) 899
BanII GRGCYC 1 cut(s) 398
BarI GAAGNNNNNNTAC 2 cut(s) 749, 781
BbsI GAAGAC 1 cut(s) 925
Bbv12I GWGCWC 1 cut(s) 398
BbvI GCAGC 6 cut(s) 128, 262, 273, 367, 454, 923
BccI CCATC 4 cut(s) 98, 438, 561, 638
BfaI CTAG 6 cut(s) 54, 315, 456, 882, 890, 1115
BfmI CTRYAG 2 cut(s) 287, 961
BfrI CTTAAG 1 cut(s) 1109
BisI GCNGC 6 cut(s) 142, 276, 287, 381, 468, 912
BlsI GCNGC 6 cut(s) 143, 277, 288, 382, 469, 913
Bme18I GGWCC 4 cut(s) 252, 459, 713, 957
BmgT120I GGNCC 5 cut(s) 252, 459, 505, 713, 957
BmiI GGNNCC 4 cut(s) 254, 782, 805, 901
BmsI GCATC 3 cut(s) 109, 697, 718
BpiI GAAGAC 1 cut(s) 925
BpmI CTGGAG 1 cut(s) 915
BpuEI CTTGAG 2 cut(s) 554, 965
BsaAI YACGTR 1 cut(s) 847
BsaJI CCNNGG 5 cut(s) 201, 248, 471, 492, 709
BsaWI WCCGGW 1 cut(s) 309
BsaXI ACNNNNNCTCC 2 cut(s) 344, 374
Bsc4I CCNNNNNNNGG 1 cut(s) 1102
Bse1I ACTGG 3 cut(s) 632, 927, 1096
Bse3DI GCAATG 2 cut(s) 208, 906
BseDI CCNNGG 5 cut(s) 201, 248, 471, 492, 709
BseGI GGATG 4 cut(s) 188, 502, 640, 733
BseLI CCNNNNNNNGG 1 cut(s) 1102
BseMI GCAATG 2 cut(s) 208, 906
BseMII CTCAG 2 cut(s) 429, 838
BseNI ACTGG 3 cut(s) 632, 927, 1096
BseRI GAGGAG 1 cut(s) 1034
BseSI GKGCMC 2 cut(s) 451, 674
BseXI GCAGC 6 cut(s) 128, 262, 273, 367, 454, 923
BshFI GGCC 3 cut(s) 506, 867, 1095
BshNI GGYRCC 1 cut(s) 899
BsiHKAI GWGCWC 1 cut(s) 398
BsiSI CCGG 2 cut(s) 310, 915
BslFI GGGAC 2 cut(s) 219, 238
BslI CCNNNNNNNGG 1 cut(s) 1102
BsmFI GGGAC 2 cut(s) 219, 238
BsnI GGCC 3 cut(s) 506, 867, 1095
Bsp1286I GDGCHC 3 cut(s) 398, 451, 674
Bsp1407I TGTACA 1 cut(s) 765
Bsp143I GATC 2 cut(s) 544, 813
BspACI CCGC 1 cut(s) 966
BspANI GGCC 3 cut(s) 506, 867, 1095
BspCNI CTCAG 2 cut(s) 428, 837
BspLI GGNNCC 4 cut(s) 254, 782, 805, 901
BspMAI CTGCAG 1 cut(s) 291
BspPI GGATC 2 cut(s) 539, 821
BspT107I GGYRCC 1 cut(s) 899
BspTI CTTAAG 1 cut(s) 1109
BsrDI GCAATG 2 cut(s) 208, 906
BsrGI TGTACA 1 cut(s) 765
BsrI ACTGG 3 cut(s) 632, 927, 1096
BssECI CCNNGG 5 cut(s) 201, 248, 471, 492, 709
BssMI GATC 2 cut(s) 544, 813
BssT1I CCWWGG 3 cut(s) 471, 492, 709
Bst4CI ACNGT 3 cut(s) 61, 252, 340
Bst6I CTCTTC 1 cut(s) 981
BstAFI CTTAAG 1 cut(s) 1109
BstAPI GCANNNNNTGC 1 cut(s) 431
BstAUI TGTACA 1 cut(s) 765
BstBAI YACGTR 1 cut(s) 847
BstDEI CTNAG 5 cut(s) 386, 415, 521, 824, 1015
BstDSI CCRYGG 1 cut(s) 248
BstF5I GGATG 4 cut(s) 188, 502, 640, 733
BstKTI GATC 2 cut(s) 547, 816
BstMBI GATC 2 cut(s) 544, 813
BstMWI GCNNNNNNNGC 3 cut(s) 431, 899, 908
BstNSI RCATGY 1 cut(s) 844
BstSFI CTRYAG 2 cut(s) 287, 961
BstSLI GKGCMC 2 cut(s) 451, 674
BstSNI TACGTA 1 cut(s) 847
BstV1I GCAGC 6 cut(s) 128, 262, 273, 367, 454, 923
BstV2I GAAGAC 1 cut(s) 925
BstX2I RGATCY 1 cut(s) 813
BstXI CCANNNNNNTGG 2 cut(s) 237, 560
BstYI RGATCY 1 cut(s) 813
BsuRI GGCC 3 cut(s) 506, 867, 1095
BtgI CCRYGG 1 cut(s) 248
BtsCI GGATG 4 cut(s) 188, 502, 640, 733
BtsIMutI CAGTG 1 cut(s) 336
CaiI CAGNNNCTG 1 cut(s) 431
Cfr13I GGNCC 5 cut(s) 252, 459, 505, 713, 957
Csp6I GTAC 5 cut(s) 574, 766, 821, 844, 1083
CspCI CAANNNNNGTGG 2 cut(s) 757, 792
CviAII CATG 4 cut(s) 841, 997, 1028, 1077
CviQI GTAC 5 cut(s) 574, 766, 821, 844, 1083
DdeI CTNAG 5 cut(s) 386, 415, 521, 824, 1015
DpnI GATC 2 cut(s) 546, 815
DpnII GATC 2 cut(s) 544, 813
Eam1104I CTCTTC 1 cut(s) 981
EarI CTCTTC 1 cut(s) 981
Ecl136II GAGCTC 1 cut(s) 396
Eco105I TACGTA 1 cut(s) 847
Eco130I CCWWGG 3 cut(s) 471, 492, 709
Eco147I AGGCCT 1 cut(s) 867
Eco24I GRGCYC 1 cut(s) 398
Eco47I GGWCC 4 cut(s) 252, 459, 713, 957
Eco53kI GAGCTC 1 cut(s) 396
Eco57I CTGAAG 1 cut(s) 819
EcoICRI GAGCTC 1 cut(s) 396
EcoRI GAATTC 1 cut(s) 1001
EcoT14I CCWWGG 3 cut(s) 471, 492, 709
EcoT22I ATGCAT 1 cut(s) 701
EcoT38I GRGCYC 1 cut(s) 398
ErhI CCWWGG 3 cut(s) 471, 492, 709
FaeI CATG 4 cut(s) 844, 1000, 1031, 1080
FaqI GGGAC 2 cut(s) 219, 238
FatI CATG 4 cut(s) 840, 996, 1027, 1076
Fnu4HI GCNGC 6 cut(s) 142, 276, 287, 381, 468, 912
FokI GGATG 4 cut(s) 175, 509, 647, 740
FriOI GRGCYC 1 cut(s) 398
Fsp4HI GCNGC 6 cut(s) 142, 276, 287, 381, 468, 912
FspBI CTAG 6 cut(s) 54, 315, 456, 882, 890, 1115
GluI GCNGC 6 cut(s) 142, 276, 287, 381, 468, 912
GsuI CTGGAG 1 cut(s) 915
HaeIII GGCC 3 cut(s) 506, 867, 1095
HapII CCGG 2 cut(s) 310, 915
Hin1II CATG 4 cut(s) 844, 1000, 1031, 1080
HindIII AAGCTT 1 cut(s) 758
HinfI GANTC 6 cut(s) 29, 131, 169, 322, 413, 658
HpaII CCGG 2 cut(s) 310, 915
HphI GGTGA 1 cut(s) 968
Hpy166II GTNNAC 1 cut(s) 1033
Hpy188I TCNGA 1 cut(s) 103
Hpy188III TCNNGA 5 cut(s) 54, 441, 662, 797, 944
Hpy8I GTNNAC 1 cut(s) 1033
HpyAV CCTTC 3 cut(s) 358, 496, 794
HpyCH4III ACNGT 3 cut(s) 61, 252, 340
HpyCH4IV ACGT 1 cut(s) 846
HpyCH4V TGCA 7 cut(s) 144, 289, 329, 336, 688, 699, 911
HpyF10VI GCNNNNNNNGC 3 cut(s) 431, 899, 908
HpyF3I CTNAG 5 cut(s) 386, 415, 521, 824, 1015
HpySE526I ACGT 1 cut(s) 846
Hsp92II CATG 4 cut(s) 844, 1000, 1031, 1080
Kzo9I GATC 2 cut(s) 544, 813
LmnI GCTCC 3 cut(s) 352, 606, 1021
Lsp1109I GCAGC 6 cut(s) 128, 262, 273, 367, 454, 923
LweI GCATC 3 cut(s) 109, 697, 718
MaeI CTAG 6 cut(s) 54, 315, 456, 882, 890, 1115
MaeII ACGT 1 cut(s) 846
MaeIII GTNAC 2 cut(s) 4, 305
MalI GATC 2 cut(s) 546, 815
MboI GATC 2 cut(s) 544, 813
MboII GAAGA 4 cut(s) 128, 613, 930, 998
MflI RGATCY 1 cut(s) 813
MhlI GDGCHC 3 cut(s) 398, 451, 674
MluCI AATT 4 cut(s) 23, 991, 1001, 1053
MlyI GAGTC 3 cut(s) 38, 163, 407
MmeI TCCRAC 2 cut(s) 612, 619
MnlI CCTC 8 cut(s) 121, 196, 312, 529, 717, 890, 940, 1012
Mph1103I ATGCAT 1 cut(s) 701
MseI TTAA 8 cut(s) 420, 597, 702, 933, 1047, 1062, 1088, 1110
MslI CAYNNNNRTG 2 cut(s) 558, 1075
MspCI CTTAAG 1 cut(s) 1109
MspI CCGG 2 cut(s) 310, 915
MwoI GCNNNNNNNGC 3 cut(s) 431, 899, 908
NdeII GATC 2 cut(s) 544, 813
NlaIII CATG 4 cut(s) 844, 1000, 1031, 1080
NlaIV GGNNCC 4 cut(s) 254, 782, 805, 901
NmuCI GTSAC 1 cut(s) 4
NsiI ATGCAT 1 cut(s) 701
NspI RCATGY 1 cut(s) 844
PceI AGGCCT 1 cut(s) 867
PciI ACATGT 1 cut(s) 840
PfeI GAWTC 3 cut(s) 131, 322, 658
PkrI GCNGC 6 cut(s) 143, 277, 288, 382, 469, 913
PleI GAGTC 3 cut(s) 37, 163, 407
PpsI GAGTC 3 cut(s) 37, 163, 407
Ppu21I YACGTR 1 cut(s) 847
PscI ACATGT 1 cut(s) 840
PsiI TTATAA 1 cut(s) 300
Psp124BI GAGCTC 1 cut(s) 398
PspN4I GGNNCC 4 cut(s) 254, 782, 805, 901
PspPI GGNCC 5 cut(s) 252, 459, 505, 713, 957
PstI CTGCAG 1 cut(s) 291
PstNI CAGNNNCTG 1 cut(s) 431
PsuI RGATCY 1 cut(s) 813
RsaI GTAC 5 cut(s) 575, 767, 822, 845, 1084
RsaNI GTAC 5 cut(s) 574, 766, 821, 844, 1083
RseI CAYNNNNRTG 2 cut(s) 558, 1075
SacI GAGCTC 1 cut(s) 398
SaqAI TTAA 8 cut(s) 420, 597, 702, 933, 1047, 1062, 1088, 1110
SatI GCNGC 6 cut(s) 142, 276, 287, 381, 468, 912
Sau3AI GATC 2 cut(s) 544, 813
Sau96I GGNCC 5 cut(s) 252, 459, 505, 713, 957
SchI GAGTC 3 cut(s) 38, 163, 407
SduI GDGCHC 3 cut(s) 398, 451, 674
SfaNI GCATC 3 cut(s) 109, 697, 718
SfcI CTRYAG 2 cut(s) 287, 961
SinI GGWCC 4 cut(s) 252, 459, 713, 957
SmiMI CAYNNNNRTG 2 cut(s) 558, 1075
SmlI CTYRAG 3 cut(s) 533, 944, 1109
SmoI CTYRAG 3 cut(s) 533, 944, 1109
SnaBI TACGTA 1 cut(s) 847
Sse9I AATT 4 cut(s) 23, 991, 1001, 1053
SseBI AGGCCT 1 cut(s) 867
SsiI CCGC 1 cut(s) 966
SspMI CTAG 6 cut(s) 54, 315, 456, 882, 890, 1115
SstI GAGCTC 1 cut(s) 398
StuI AGGCCT 1 cut(s) 867
StyI CCWWGG 3 cut(s) 471, 492, 709
TaaI ACNGT 3 cut(s) 61, 252, 340
TaiI ACGT 1 cut(s) 849
TaqI TCGA 1 cut(s) 663
TasI AATT 4 cut(s) 23, 991, 1001, 1053
TatI WGTACW 3 cut(s) 573, 765, 820
TfiI GAWTC 3 cut(s) 131, 322, 658
Tru1I TTAA 8 cut(s) 420, 597, 702, 933, 1047, 1062, 1088, 1110
Tru9I TTAA 8 cut(s) 420, 597, 702, 933, 1047, 1062, 1088, 1110
TscAI CASTG 1 cut(s) 343
TseFI GTSAC 1 cut(s) 4
TseI GCWGC 6 cut(s) 141, 275, 286, 380, 467, 911
Tsp45I GTSAC 1 cut(s) 4
TspDTI ATGAA 9 cut(s) 129, 177, 285, 750, 985, 994, 1016, 1059, 1065
TspRI CASTG 1 cut(s) 343
Vha464I CTTAAG 1 cut(s) 1109
VpaK11BI GGWCC 4 cut(s) 252, 459, 713, 957
XapI RAATTY 3 cut(s) 23, 991, 1001
XbaI TCTAGA 1 cut(s) 53
XceI RCATGY 1 cut(s) 844
XspI CTAG 6 cut(s) 54, 315, 456, 882, 890, 1115
Zsp2I ATGCAT 1 cut(s) 701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.