Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

65455257 .. 65463298

Gene Structure 8042 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG488100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1014 bp

ATGAAGGAACCTAGAGAGTTGGTCTTCATCACAGCCCCAGGTATTGGCCATCTCGTATCAACCGTCGAGATTGCAAAGCTCCTTGTTGATCGAGATGACCAAATTTTCGTCACAATTCTCATAATGAAGTTTCCCTTTGACGACTCCAACACCAAAGGTTCTGAAGAAGACTACTACTCCTCCATTTCACCGCGCATCAAGTTCATGAGCCTCCCAGAGCTCAACATAGACACAAAAGGAATGGGACCTTCCGCCTTCTTCAAAATATTTGTTGAAAATCAGAAACCTAACGTTACAGACTTGGTCACCAAACTCACCGAGTCTCAGTCCGAGTCCAAGCCTCGACTCGCCGGGTTTGTCATTGACATGTTCTGCACTACCATGATCGATGTGGCCAATGAATTTGGGGTTCCTACTTACGTTTTCTTCACGTCCAACGCAGCGTGTCTTGGGTTCTTTCTACACCTCCAAGCCATTTGTGATGAGGAAAACAAGGACGTTTCCGAGTTCTTGGAGTCGGGGGCCGATTTATCTCTGCCGAGTTTTATCAATCCGCTGCCTCATGGAGTTTTGACTAGTGTTTTTCCAGACAAGGTGGGCGCCCATGCATTCCTCAACCATGCAAGAAGGTTTAGAGAAACCAAGGGTATTTTGGTAAACACGTTCTTGGAGTTGGAGTCACATGCTTTGCACTCTCTTTCCGATGGTAAAGTCCCGCCGGTGTACCCCGTGGGGCCCTTACTGAACTTGAAAAATGATGATGACCAACCGAAGTCCGATATCTTGGAGTGGCTTGAGGATCAGCCTCCCTTATCTGTAGTGTTCCTGTGCTTCGGGAGCATGGGAAGTTTTGCTGAGGATCAGGTGAAAGAGATAGCGTGTGCGTTGGAGCAAAGTGGATATCGGTTCTTGTGGTCCTTACGTCAGCCCCCACCAAAGGATCAGCTAGAGATCAAACTTGAGCTTCTTGGGTTTAACGGCCAGATTATCATCAGAACCAGGGTGAGGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

337

Amino Acids

37.74

Weight (kDa)

4.93

Isoelectric Point (pI)

43.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	599
AccB7I	CCANNNNNTGG	1 cut(s)	44
AccII	CGCG	1 cut(s)	193
AciI	CCGC	4 cut(s)	191, 252, 554, 716
AclI	AACGTT	1 cut(s)	291
AclWI	GGATC	3 cut(s)	807, 867, 948
AcoI	YGGCCR	3 cut(s)	46, 393, 979
AcsI	RAATTY	2 cut(s)	102, 401
AcuI	CTGAAG	1 cut(s)	183
AcyI	GRCGYC	1 cut(s)	600
AfaI	GTAC	1 cut(s)	725
AfiI	CCNNNNNNNGG	3 cut(s)	44, 937, 1005
AflIII	ACRYGT	2 cut(s)	366, 660
AgsI	TTSAA	3 cut(s)	262, 275, 751
AhlI	ACTAGT	1 cut(s)	575
AjiI	CACGTC	1 cut(s)	432
AjnI	CCWGG	2 cut(s)	37, 998
AluBI	AGCT	4 cut(s)	79, 220, 946, 964
AluI	AGCT	4 cut(s)	79, 220, 946, 964
Alw21I	GWGCWC	1 cut(s)	222
Alw26I	GTCTC	1 cut(s)	327
AlwI	GGATC	3 cut(s)	807, 867, 948
AoxI	GGCC	5 cut(s)	46, 393, 522, 734, 979
ApaI	GGGCCC	1 cut(s)	738
ApeKI	GCWGC	2 cut(s)	440, 556
ApoI	RAATTY	2 cut(s)	102, 401
ArsI	GACNNNNNNTTYG	2 cut(s)	89, 121
AspLEI	GCGC	2 cut(s)	195, 602
AspS9I	GGNCC	5 cut(s)	245, 522, 734, 735, 915
AsuC2I	CCSGG	1 cut(s)	352
AsuHPI	GGTGA	4 cut(s)	180, 298, 307, 877
AvaII	GGWCC	2 cut(s)	245, 915
BaeGI	GKGCMC	1 cut(s)	738
BalI	TGGCCA	2 cut(s)	48, 395
BanI	GGYRCC	1 cut(s)	599
BanII	GRGCYC	2 cut(s)	222, 738
BbsI	GAAGAC	2 cut(s)	16, 174
Bbv12I	GWGCWC	1 cut(s)	222
BbvCI	CCTCAGC	1 cut(s)	855
BbvI	GCAGC	2 cut(s)	452, 543
BccI	CCATC	2 cut(s)	57, 698
BceAI	ACGGC	1 cut(s)	994
BciT130I	CCWGG	2 cut(s)	39, 1000
BcnI	CCSGG	1 cut(s)	352
BcoDI	GTCTC	1 cut(s)	327
BcuI	ACTAGT	1 cut(s)	575
BfaI	CTAG	3 cut(s)	12, 576, 947
BfmI	CTRYAG	1 cut(s)	816
BfoI	RGCGCY	1 cut(s)	603
BisI	GCNGC	2 cut(s)	441, 557
BlsI	GCNGC	2 cut(s)	442, 558
Bme1390I	CCNGG	3 cut(s)	39, 352, 1000
Bme18I	GGWCC	2 cut(s)	245, 915
BmgBI	CACGTC	1 cut(s)	432
BmgT120I	GGNCC	5 cut(s)	245, 522, 734, 735, 915
BmiI	GGNNCC	7 cut(s)	9, 246, 411, 523, 601, 735, 736
BmrFI	CCNGG	3 cut(s)	39, 352, 1000
BmsI	GCATC	1 cut(s)	204
BpiI	GAAGAC	2 cut(s)	16, 174
Bpu10I	CCTNAGC	1 cut(s)	855
BpuEI	CTTGAG	2 cut(s)	815, 980
BpuMI	CCSGG	1 cut(s)	352
Bsa29I	ATCGAT	1 cut(s)	387
BsaBI	GATNNNNATC	1 cut(s)	989
BsaHI	GRCGYC	1 cut(s)	600
BsaJI	CCNNGG	4 cut(s)	37, 642, 729, 999
BsaXI	ACNNNNNCTCC	6 cut(s)	161, 164, 191, 194, 662, 692
Bsc4I	CCNNNNNNNGG	3 cut(s)	44, 937, 1005
Bse118I	RCCGGY	1 cut(s)	718
Bse8I	GATNNNNATC	1 cut(s)	989
BseBI	CCWGG	2 cut(s)	39, 1000
BseCI	ATCGAT	1 cut(s)	387
BseDI	CCNNGG	4 cut(s)	37, 642, 729, 999
BseJI	GATNNNNATC	1 cut(s)	989
BseLI	CCNNNNNNNGG	3 cut(s)	44, 937, 1005
BseMII	CTCAG	2 cut(s)	338, 846
BseRI	GAGGAG	1 cut(s)	169
BseSI	GKGCMC	1 cut(s)	738
BseXI	GCAGC	2 cut(s)	452, 543
BsgI	GTGCAG	1 cut(s)	358
Bsh1236I	CGCG	1 cut(s)	193
BshFI	GGCC	5 cut(s)	48, 395, 524, 736, 981
BshNI	GGYRCC	1 cut(s)	599
BshVI	ATCGAT	1 cut(s)	387
BsiHKAI	GWGCWC	1 cut(s)	222
BsiSI	CCGG	2 cut(s)	351, 719
BslFI	GGGAC	2 cut(s)	258, 698
BslI	CCNNNNNNNGG	3 cut(s)	44, 937, 1005
BsmAI	GTCTC	1 cut(s)	327
BsmFI	GGGAC	2 cut(s)	258, 698
BsmI	GAATGC	1 cut(s)	608
BsnI	GGCC	5 cut(s)	48, 395, 524, 736, 981
Bsp120I	GGGCCC	1 cut(s)	734
Bsp1286I	GDGCHC	2 cut(s)	222, 738
Bsp143I	GATC	6 cut(s)	88, 384, 799, 859, 940, 951
BspACI	CCGC	4 cut(s)	191, 252, 554, 716
BspANI	GGCC	5 cut(s)	48, 395, 524, 736, 981
BspCNI	CTCAG	2 cut(s)	337, 847
BspDI	ATCGAT	1 cut(s)	387
BspFNI	CGCG	1 cut(s)	193
BspHI	TCATGA	1 cut(s)	204
BspLI	GGNNCC	7 cut(s)	9, 246, 411, 523, 601, 735, 736
BspPI	GGATC	3 cut(s)	807, 867, 948
BspT107I	GGYRCC	1 cut(s)	599
BsrFI	RCCGGY	1 cut(s)	718
BssAI	RCCGGY	1 cut(s)	718
BssECI	CCNNGG	4 cut(s)	37, 642, 729, 999
BssMI	GATC	6 cut(s)	88, 384, 799, 859, 940, 951
BssNI	GRCGYC	1 cut(s)	600
BssT1I	CCWWGG	1 cut(s)	642
Bst2UI	CCWGG	2 cut(s)	39, 1000
Bst4CI	ACNGT	1 cut(s)	64
BstACI	GRCGYC	1 cut(s)	600
BstDEI	CTNAG	2 cut(s)	324, 855
BstDSI	CCRYGG	1 cut(s)	729
BstEII	GGTNACC	1 cut(s)	304
BstFNI	CGCG	1 cut(s)	193
BstH2I	RGCGCY	1 cut(s)	603
BstHHI	GCGC	2 cut(s)	195, 602
BstKTI	GATC	6 cut(s)	91, 387, 802, 862, 943, 954
BstMAI	GTCTC	1 cut(s)	327
BstMBI	GATC	6 cut(s)	88, 384, 799, 859, 940, 951
BstMWI	GCNNNNNNNGC	1 cut(s)	837
BstNI	CCWGG	2 cut(s)	39, 1000
BstNSI	RCATGY	2 cut(s)	370, 686
BstPI	GGTNACC	1 cut(s)	304
BstSCI	CCNGG	3 cut(s)	37, 350, 998
BstSFI	CTRYAG	1 cut(s)	816
BstSLI	GKGCMC	1 cut(s)	738
BstUI	CGCG	1 cut(s)	193
BstV1I	GCAGC	2 cut(s)	452, 543
BstV2I	GAAGAC	2 cut(s)	16, 174
Bsu15I	ATCGAT	1 cut(s)	387
BsuRI	GGCC	5 cut(s)	48, 395, 524, 736, 981
BsuTUI	ATCGAT	1 cut(s)	387
BtgI	CCRYGG	1 cut(s)	729
BtrI	CACGTC	1 cut(s)	432
CciI	TCATGA	1 cut(s)	204
CfoI	GCGC	2 cut(s)	195, 602
Cfr10I	RCCGGY	1 cut(s)	718
Cfr13I	GGNCC	5 cut(s)	245, 522, 734, 735, 915
ClaI	ATCGAT	1 cut(s)	387
Csp6I	GTAC	1 cut(s)	724
CviAII	CATG	8 cut(s)	205, 367, 382, 563, 605, 620, 683, 841
CviQI	GTAC	1 cut(s)	724
DdeI	CTNAG	2 cut(s)	324, 855
DinI	GGCGCC	1 cut(s)	601
DpnI	GATC	6 cut(s)	90, 386, 801, 861, 942, 953
DpnII	GATC	6 cut(s)	88, 384, 799, 859, 940, 951
EaeI	YGGCCR	3 cut(s)	46, 393, 979
EciI	GGCGGA	1 cut(s)	241
Ecl136II	GAGCTC	1 cut(s)	220
Eco130I	CCWWGG	1 cut(s)	642
Eco24I	GRGCYC	2 cut(s)	222, 738
Eco32I	GATATC	2 cut(s)	781, 902
Eco47I	GGWCC	2 cut(s)	245, 915
Eco53kI	GAGCTC	1 cut(s)	220
Eco57I	CTGAAG	1 cut(s)	183
Eco91I	GGTNACC	1 cut(s)	304
EcoICRI	GAGCTC	1 cut(s)	220
EcoO109I	RGGNCCY	3 cut(s)	245, 734, 735
EcoO65I	GGTNACC	1 cut(s)	304
EcoRII	CCWGG	2 cut(s)	37, 998
EcoRV	GATATC	2 cut(s)	781, 902
EcoT14I	CCWWGG	1 cut(s)	642
EcoT22I	ATGCAT	1 cut(s)	610
EcoT38I	GRGCYC	2 cut(s)	222, 738
EgeI	GGCGCC	1 cut(s)	601
EheI	GGCGCC	1 cut(s)	601
ErhI	CCWWGG	1 cut(s)	642
FaeI	CATG	8 cut(s)	208, 370, 385, 566, 608, 623, 686, 844
FalI	AAGNNNNNCTT	2 cut(s)	119, 151
FaqI	GGGAC	2 cut(s)	258, 698
FatI	CATG	8 cut(s)	204, 366, 381, 562, 604, 619, 682, 840
FauI	CCCGC	1 cut(s)	723
Fnu4HI	GCNGC	2 cut(s)	441, 557
FriOI	GRGCYC	2 cut(s)	222, 738
Fsp4HI	GCNGC	2 cut(s)	441, 557
FspBI	CTAG	3 cut(s)	12, 576, 947
GlaI	GCGC	2 cut(s)	194, 601
GluI	GCNGC	2 cut(s)	441, 557
HaeII	RGCGCY	1 cut(s)	603
HaeIII	GGCC	5 cut(s)	48, 395, 524, 736, 981
HapII	CCGG	2 cut(s)	351, 719
HhaI	GCGC	2 cut(s)	195, 602
Hin1I	GRCGYC	1 cut(s)	600
Hin1II	CATG	8 cut(s)	208, 370, 385, 566, 608, 623, 686, 844
Hin6I	GCGC	2 cut(s)	193, 600
HinP1I	GCGC	2 cut(s)	193, 600
HinfI	GANTC	6 cut(s)	143, 320, 332, 345, 515, 677
HpaII	CCGG	2 cut(s)	351, 719
HphI	GGTGA	4 cut(s)	180, 298, 307, 877
Hpy166II	GTNNAC	2 cut(s)	658, 724
Hpy188I	TCNGA	7 cut(s)	163, 282, 331, 505, 703, 778, 995
Hpy188III	TCNNGA	5 cut(s)	67, 92, 205, 587, 835
Hpy8I	GTNNAC	2 cut(s)	658, 724
Hpy99I	CGWCG	1 cut(s)	68
HpyAV	CCTTC	3 cut(s)	258, 265, 621
HpyCH4III	ACNGT	1 cut(s)	64
HpyCH4IV	ACGT	6 cut(s)	291, 420, 431, 498, 662, 922
HpyCH4V	TGCA	5 cut(s)	74, 375, 608, 623, 691
HpyF10VI	GCNNNNNNNGC	1 cut(s)	837
HpyF3I	CTNAG	2 cut(s)	324, 855
HpySE526I	ACGT	6 cut(s)	291, 420, 431, 498, 662, 922
Hsp92I	GRCGYC	1 cut(s)	600
Hsp92II	CATG	8 cut(s)	208, 370, 385, 566, 608, 623, 686, 844
HspAI	GCGC	2 cut(s)	193, 600
KasI	GGCGCC	1 cut(s)	599
Kzo9I	GATC	6 cut(s)	88, 384, 799, 859, 940, 951
LmnI	GCTCC	3 cut(s)	84, 837, 889
Lsp1109I	GCAGC	2 cut(s)	452, 543
LweI	GCATC	1 cut(s)	204
MaeI	CTAG	3 cut(s)	12, 576, 947
MaeII	ACGT	6 cut(s)	291, 420, 431, 498, 662, 922
MaeIII	GTNAC	4 cut(s)	109, 292, 304, 678
MalI	GATC	6 cut(s)	90, 386, 801, 861, 942, 953
MboI	GATC	6 cut(s)	88, 384, 799, 859, 940, 951
MboII	GAAGA	5 cut(s)	16, 176, 179, 250, 418
MhlI	GDGCHC	2 cut(s)	222, 738
MlsI	TGGCCA	2 cut(s)	48, 395
MluCI	AATT	3 cut(s)	102, 114, 401
MluNI	TGGCCA	2 cut(s)	48, 395
Mly113I	GGCGCC	1 cut(s)	600
MlyI	GAGTC	6 cut(s)	137, 329, 339, 341, 524, 686
MmeI	TCCRAC	4 cut(s)	171, 459, 654, 867
Mox20I	TGGCCA	2 cut(s)	48, 395
Mph1103I	ATGCAT	1 cut(s)	610
MscI	TGGCCA	2 cut(s)	48, 395
MseI	TTAA	2 cut(s)	975, 1012
MslI	CAYNNNNRTG	2 cut(s)	365, 380
Msp20I	TGGCCA	2 cut(s)	48, 395
MspA1I	CMGCKG	1 cut(s)	556
MspI	CCGG	2 cut(s)	351, 719
MspR9I	CCNGG	3 cut(s)	39, 352, 1000
Mva1269I	GAATGC	1 cut(s)	608
MvaI	CCWGG	2 cut(s)	39, 1000
MvnI	CGCG	1 cut(s)	193
MwoI	GCNNNNNNNGC	1 cut(s)	837
NarI	GGCGCC	1 cut(s)	600
NciI	CCSGG	1 cut(s)	352
NdeII	GATC	6 cut(s)	88, 384, 799, 859, 940, 951
NlaIII	CATG	8 cut(s)	208, 370, 385, 566, 608, 623, 686, 844
NlaIV	GGNNCC	7 cut(s)	9, 246, 411, 523, 601, 735, 736
NmeAIII	GCCGAG	1 cut(s)	564
NmuCI	GTSAC	3 cut(s)	109, 304, 678
NsiI	ATGCAT	1 cut(s)	610
NspI	RCATGY	2 cut(s)	370, 686
PagI	TCATGA	1 cut(s)	204
PciI	ACATGT	1 cut(s)	366
PcsI	WCGNNNNNNNCGW	1 cut(s)	60
PctI	GAATGC	1 cut(s)	608
PflFI	GACNNNGTC	1 cut(s)	302
PflMI	CCANNNNNTGG	1 cut(s)	44
PkrI	GCNGC	2 cut(s)	442, 558
PleI	GAGTC	6 cut(s)	137, 328, 339, 340, 523, 685
PluTI	GGCGCC	1 cut(s)	603
PpsI	GAGTC	6 cut(s)	137, 328, 339, 340, 523, 685
PpuMI	RGGWCCY	1 cut(s)	245
PscI	ACATGT	1 cut(s)	366
Psp124BI	GAGCTC	1 cut(s)	222
Psp1406I	AACGTT	1 cut(s)	291
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	2 cut(s)	37, 998
PspEI	GGTNACC	1 cut(s)	304
PspGI	CCWGG	2 cut(s)	37, 998
PspN4I	GGNNCC	7 cut(s)	9, 246, 411, 523, 601, 735, 736
PspOMI	GGGCCC	1 cut(s)	734
PspPI	GGNCC	5 cut(s)	245, 522, 734, 735, 915
PspPPI	RGGWCCY	1 cut(s)	245
PsyI	GACNNNGTC	1 cut(s)	302
RsaI	GTAC	1 cut(s)	725
RsaNI	GTAC	1 cut(s)	724
RseI	CAYNNNNRTG	2 cut(s)	365, 380
SacI	GAGCTC	1 cut(s)	222
SaqAI	TTAA	2 cut(s)	975, 1012
SatI	GCNGC	2 cut(s)	441, 557
Sau3AI	GATC	6 cut(s)	88, 384, 799, 859, 940, 951
Sau96I	GGNCC	5 cut(s)	245, 522, 734, 735, 915
SchI	GAGTC	6 cut(s)	137, 329, 339, 341, 524, 686
ScrFI	CCNGG	3 cut(s)	39, 352, 1000
SduI	GDGCHC	2 cut(s)	222, 738
SfaNI	GCATC	1 cut(s)	204
SfcI	CTRYAG	1 cut(s)	816
SfoI	GGCGCC	1 cut(s)	601
SgrAI	CRCCGGYG	1 cut(s)	718
SinI	GGWCC	2 cut(s)	245, 915
SmiMI	CAYNNNNRTG	2 cut(s)	365, 380
SmlI	CTYRAG	2 cut(s)	794, 959
SmoI	CTYRAG	2 cut(s)	794, 959
SpeI	ACTAGT	1 cut(s)	575
Sse9I	AATT	3 cut(s)	102, 114, 401
SsiI	CCGC	4 cut(s)	191, 252, 554, 716
SspDI	GGCGCC	1 cut(s)	599
SspI	AATATT	1 cut(s)	267
SspMI	CTAG	3 cut(s)	12, 576, 947
SstI	GAGCTC	1 cut(s)	222
StyD4I	CCNGG	3 cut(s)	37, 350, 998
StyI	CCWWGG	1 cut(s)	642
TaaI	ACNGT	1 cut(s)	64
TaiI	ACGT	6 cut(s)	294, 423, 434, 501, 665, 925
TaqI	TCGA	4 cut(s)	66, 91, 343, 387
TasI	AATT	3 cut(s)	102, 114, 401
Tru1I	TTAA	2 cut(s)	975, 1012
Tru9I	TTAA	2 cut(s)	975, 1012
TseFI	GTSAC	3 cut(s)	109, 304, 678
TseI	GCWGC	2 cut(s)	440, 556
Tsp45I	GTSAC	3 cut(s)	109, 304, 678
TspDTI	ATGAA	5 cut(s)	16, 17, 140, 193, 414
Tth111I	GACNNNGTC	1 cut(s)	302
Van91I	CCANNNNNTGG	1 cut(s)	44
VpaK11BI	GGWCC	2 cut(s)	245, 915
XapI	RAATTY	2 cut(s)	102, 401
XceI	RCATGY	2 cut(s)	370, 686
XcmI	CCANNNNNNNNNTGG	2 cut(s)	388, 649
XspI	CTAG	3 cut(s)	12, 576, 947
Zsp2I	ATGCAT	1 cut(s)	610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.