Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003810.1

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

1615 .. 5328

Gene Structure 3714 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003810.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

atggagaaacctgcagagctcgtgttcatcccatcccctggtataggccacctggtttcaacacttgagatcgcaaagttcctcctgtctcgagacgaccaactcttgatcactgtcctcatcatgaagtttcccgctgtttccaaaggcactgatgcttatgtcgagtcatttgcagactcttcttctcccatatcacagcgtatcaagttcatcaacctcccacaagtcaatactgaccatacggaaggtagtgtccgcaatagcttgatcggtttagttgaaagtcagcaaccccatgtcaaagatgccatcacaaaactcagcgagtcccagactcgacttgcggggtttgtcgtcgacatgttctgtacggctatgatcgacgtggccgaccaatttggtgttcctagctacgtgttcttcacctccagcgccgccacgctcgggctaatgttccacctccaagcgctgcgcgatcaagaaggcaaggactgcatcgagttcaaagactccgacgctgagttgctcatcccgagttttgtcaatcccttgccagctgctaaagtcctacctggcaggctattcgcaaaggagggagcagaatcatttctcaacattatcaaaaggtttagagacaccaagggtattttggtgaacacgttcgcagacctagaatcgcatgcccttcatgctctttcatctgatgcctttatccctcccgtatatccggtaggacccttacttaacttgaacaccaatgaaagtcgtgtggattcggacgaggccaagcagaagtctgatatcttgaaatggcttgatgatcagcctccattgtctgtagtgttcttgtgctttggaagcatgggaagctttggcgaggaccaggtgaaagagatcgcccatgccctagagcaggcgggccatcggttcttgtggtccttacgtcggcccccacccacaggaaaaattgcttttccaagtgactacgatgaccacaccggagtcttgcccaaagggttcctcgatcgaacagttgggattggaaaggtcataggctgggccccgcaagttgccgtcttggctcacccatctgtgggaggatttgtatcccattgtgggtggaattccacgcttgagagtctttggcacggtgtgcccgttgctacgtggccattgtacgcggagcaacagctgaacgcgtttcagctggtggaggaattggaattggcggtggaaattgatatgagctacaggagcgagagtccagttcttgtgagcgcgaaggagatagagagaggaataagagaggtgatgaaacgtgacaatgatagaagaaagagagtgaaagaaatgagtgagaagggcaagaaagctttgatggatgatgatagcatgttgtatgctcaggcctctttggatgtgtgttatgagatccaagatgttatagaaacatatggcaaagcctcaggggtggaagttgtggattcacatgagcgatatctaggtctcccaacttatgtgggccgcaagaaaacggcgacattccaatacatcaaggataacttggccaagaagttaaagaattggcaggggaagatacttagtggtgcagacaaagacattttaattaggggaagcaccgaagacaaaagaaaaattaactggaaagcttgggggtctctttgccatcctaaagaagaaggagaacttggttttcggagtcttactgagtttaacatggctatgttatccaaacaagcttggaggattgctaatgatcatgaatccttaattgctcgagtctacaaggctcgttactttcctgggagctcgttttggatggctcttgttcacagcgccccatcatactcatggagaagcatttttgcttctagagaattgcttaaagcaagggatattggcagattggtactagtgaatctctcaaagtttggtctgataattggatgggatgaaggtaaaatcagagttgtttttgctcaggaaggggccgaagcaattttaaacatccctttgactaggcgattagttaatgacatagtggcttgttcggttggagaagaaaagggagttctcagtcaagacagcttagtcaagacaacctatagatatgctttgtccacttctttggagaggccaggaattttggagaatgtgacatctcaattttggaagaagatatggcgggctaatattccaagctcggctaaggtgcatgtatggaaagtttgccacaatattcttccaactctaacaagacttgtagccaaacatgttgtcattgaatcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

771

Amino Acids

86.08

Weight (kDa)

6.85

Isoelectric Point (pI)

44.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2114
Acc36I	ACCTGC	1 cut(s)	19
AccB7I	CCANNNNNTGG	1 cut(s)	38
AccI	GTMKAC	2 cut(s)	360, 1806
AccII	CGCG	4 cut(s)	477, 1184, 1202, 1283
AclWI	GGATC	1 cut(s)	1429
AcoI	YGGCCR	3 cut(s)	390, 1172, 1569
AcsI	RAATTY	2 cut(s)	1126, 2166
AdeI	CACNNNGTG	1 cut(s)	1156
AfaI	GTAC	3 cut(s)	373, 1181, 1935
AfeI	AGCGCT	1 cut(s)	471
AfiI	CCNNNNNNNGG	9 cut(s)	38, 44, 447, 916, 948, 962, 1096, 1097, 1119
AflIII	ACRYGT	5 cut(s)	363, 417, 660, 1200, 2296
AgsI	TTSAA	6 cut(s)	60, 284, 508, 754, 811, 2309
AhlI	ACTAGT	1 cut(s)	1936
AjiI	CACGTC	1 cut(s)	388
AjnI	CCWGG	6 cut(s)	37, 51, 574, 885, 1825, 2161
AjuI	GAANNNNNNNTTGG	4 cut(s)	390, 422, 1695, 1727
Alw21I	GWGCWC	2 cut(s)	21, 1835
Alw26I	GTCTC	5 cut(s)	87, 93, 630, 1514, 1686
AlwI	GGATC	1 cut(s)	1429
Ama87I	CYCGRG	4 cut(s)	90, 446, 535, 1800
Aor51HI	AGCGCT	1 cut(s)	471
ApaI	GGGCCC	1 cut(s)	1066
ApeKI	GCWGC	2 cut(s)	472, 560
ApoI	RAATTY	2 cut(s)	1126, 2166
ArsI	GACNNNNNNTTYG	1 cut(s)	2286
Asp700I	GAANNNNTTC	2 cut(s)	609, 662
AspLEI	GCGC	5 cut(s)	437, 472, 477, 1283, 1862
AspS9I	GGNCC	9 cut(s)	737, 883, 922, 939, 951, 1062, 1063, 1525, 2013
AsuHPI	GGTGA	5 cut(s)	418, 667, 901, 1079, 1324
AvaI	CYCGRG	4 cut(s)	90, 446, 535, 1800
AvaII	GGWCC	3 cut(s)	737, 883, 939
AxyI	CCTNAGG	1 cut(s)	1468
BaeGI	GKGCMC	2 cut(s)	1066, 1161
BalI	TGGCCA	2 cut(s)	1174, 1571
BanII	GRGCYC	3 cut(s)	21, 1066, 1835
BauI	CACGAG	1 cut(s)	20
BbsI	GAAGAC	1 cut(s)	1653
Bbv12I	GWGCWC	2 cut(s)	21, 1835
BbvI	GCAGC	2 cut(s)	459, 547
BccI	CCATC	9 cut(s)	40, 320, 933, 1099, 1375, 1698, 1837, 1873, 1965
BceAI	ACGGC	3 cut(s)	390, 1061, 1554
BcgI	CGANNNNNNTGC	4 cut(s)	155, 189, 568, 602
BciT130I	CCWGG	6 cut(s)	39, 53, 576, 887, 1827, 2163
BciVI	GTATCC	1 cut(s)	1120
BclI	TGATCA	3 cut(s)	108, 823, 1780
BcoDI	GTCTC	5 cut(s)	87, 93, 630, 1514, 1686
BcuI	ACTAGT	1 cut(s)	1936
BfaI	CTAG	7 cut(s)	411, 674, 911, 1505, 1896, 1937, 2043
BfmI	CTRYAG	4 cut(s)	12, 840, 1252, 2128
BfoI	RGCGCY	3 cut(s)	438, 473, 1863
BfuAI	ACCTGC	1 cut(s)	19
BfuI	GTATCC	1 cut(s)	1120
BglI	GCCNNNNNGGC	1 cut(s)	1082
BisI	GCNGC	4 cut(s)	438, 473, 561, 1528
BlsI	GCNGC	4 cut(s)	439, 474, 562, 1529
Bme1390I	CCNGG	6 cut(s)	39, 53, 576, 887, 1827, 2163
Bme18I	GGWCC	3 cut(s)	737, 883, 939
BmeT110I	CYCGRG	4 cut(s)	90, 446, 535, 1800
BmgBI	CACGTC	1 cut(s)	388
BmgT120I	GGNCC	9 cut(s)	737, 883, 922, 939, 951, 1062, 1063, 1525, 2013
BmiI	GGNNCC	6 cut(s)	739, 953, 1022, 1064, 1065, 2014
BmrFI	CCNGG	6 cut(s)	39, 53, 576, 887, 1827, 2163
BmsI	GCATC	4 cut(s)	145, 298, 507, 697
BpiI	GAAGAC	1 cut(s)	1653
BpmI	CTGGAG	1 cut(s)	415
Bpu10I	CCTNAGC	3 cut(s)	1407, 2004, 2232
BpuEI	CTTGAG	2 cut(s)	86, 1157
BsaAI	YACGTR	2 cut(s)	418, 1170
BsaBI	GATNNNNATC	1 cut(s)	1108
BsaI	GGTCTC	2 cut(s)	1514, 1686
BsaJI	CCNNGG	3 cut(s)	37, 642, 1826
BsaWI	WCCGGW	2 cut(s)	730, 1001
BsaXI	ACNNNNNCTCC	4 cut(s)	1092, 1122, 1249, 1279
Bsc4I	CCNNNNNNNGG	9 cut(s)	38, 44, 447, 916, 948, 962, 1096, 1097, 1119
Bse1I	ACTGG	2 cut(s)	1268, 1670
Bse21I	CCTNAGG	1 cut(s)	1468
Bse8I	GATNNNNATC	1 cut(s)	1108
BseBI	CCWGG	6 cut(s)	39, 53, 576, 887, 1827, 2163
BseDI	CCNNGG	3 cut(s)	37, 642, 1826
BseJI	GATNNNNATC	1 cut(s)	1108
BseLI	CCNNNNNNNGG	9 cut(s)	38, 44, 447, 916, 948, 962, 1096, 1097, 1119
BseMII	CTCAG	7 cut(s)	337, 513, 1421, 1482, 1722, 2018, 2113
BseNI	ACTGG	2 cut(s)	1268, 1670
BseSI	GKGCMC	2 cut(s)	1066, 1161
BseXI	GCAGC	2 cut(s)	459, 547
BseYI	CCCAGC	1 cut(s)	1059
BsgI	GTGCAG	1 cut(s)	1632
Bsh1236I	CGCG	4 cut(s)	477, 1184, 1202, 1283
Bsh1285I	CGRYCG	1 cut(s)	1030
BsiEI	CGRYCG	1 cut(s)	1030
BsiHKAI	GWGCWC	2 cut(s)	21, 1835
BsiHKCI	CYCGRG	4 cut(s)	90, 446, 535, 1800
BsiSI	CCGG	2 cut(s)	731, 1002
BslFI	GGGAC	1 cut(s)	316
BslI	CCNNNNNNNGG	9 cut(s)	38, 44, 447, 916, 948, 962, 1096, 1097, 1119
BsmAI	GTCTC	5 cut(s)	87, 93, 630, 1514, 1686
BsmBI	CGTCTC	1 cut(s)	87
BsmFI	GGGAC	1 cut(s)	316
Bso31I	GGTCTC	2 cut(s)	1514, 1686
BsoBI	CYCGRG	4 cut(s)	90, 446, 535, 1800
Bsp120I	GGGCCC	1 cut(s)	1062
Bsp1286I	GDGCHC	4 cut(s)	21, 1066, 1161, 1835
BspCNI	CTCAG	7 cut(s)	336, 514, 1420, 1481, 1723, 2017, 2112
BspFNI	CGCG	4 cut(s)	477, 1184, 1202, 1283
BspHI	TCATGA	2 cut(s)	123, 1783
BspLI	GGNNCC	6 cut(s)	739, 953, 1022, 1064, 1065, 2014
BspMAI	CTGCAG	1 cut(s)	16
BspMI	ACCTGC	1 cut(s)	19
BspPI	GGATC	1 cut(s)	1429
BspTNI	GGTCTC	2 cut(s)	1514, 1686
BsrI	ACTGG	2 cut(s)	1268, 1670
BssECI	CCNNGG	3 cut(s)	37, 642, 1826
BssSI	CACGAG	1 cut(s)	20
BssT1I	CCWWGG	1 cut(s)	642
Bst2BI	CACGAG	1 cut(s)	20
Bst2UI	CCWGG	6 cut(s)	39, 53, 576, 887, 1827, 2163
Bst4CI	ACNGT	3 cut(s)	115, 1036, 1154
Bst6I	CTCTTC	1 cut(s)	187
BstAPI	GCANNNNNTGC	2 cut(s)	495, 1156
BstBAI	YACGTR	2 cut(s)	418, 1170
BstC8I	GCNNGC	6 cut(s)	558, 581, 684, 918, 922, 2211
BstENI	CCTNNNNNAGG	2 cut(s)	42, 914
BstFNI	CGCG	4 cut(s)	477, 1184, 1202, 1283
BstH2I	RGCGCY	3 cut(s)	438, 473, 1863
BstHHI	GCGC	5 cut(s)	437, 472, 477, 1283, 1862
BstMAI	GTCTC	5 cut(s)	87, 93, 630, 1514, 1686
BstMCI	CGRYCG	1 cut(s)	1030
BstMWI	GCNNNNNNNGC	7 cut(s)	495, 692, 861, 870, 1082, 1156, 1257
BstNI	CCWGG	6 cut(s)	39, 53, 576, 887, 1827, 2163
BstNSI	RCATGY	5 cut(s)	367, 686, 1399, 2243, 2300
BstSCI	CCNGG	6 cut(s)	37, 51, 574, 885, 1825, 2161
BstSFI	CTRYAG	4 cut(s)	12, 840, 1252, 2128
BstSLI	GKGCMC	2 cut(s)	1066, 1161
BstUI	CGCG	4 cut(s)	477, 1184, 1202, 1283
BstV1I	GCAGC	2 cut(s)	459, 547
BstV2I	GAAGAC	1 cut(s)	1653
BstX2I	RGATCY	1 cut(s)	1434
BstXI	CCANNNNNNTGG	1 cut(s)	2152
BstYI	RGATCY	1 cut(s)	1434
Bsu36I	CCTNAGG	1 cut(s)	1468
BsuI	GTATCC	1 cut(s)	1120
BtrI	CACGTC	1 cut(s)	388
BtsIMutI	CAGTG	2 cut(s)	111, 150
BveI	ACCTGC	1 cut(s)	19
Cac8I	GCNNGC	6 cut(s)	558, 581, 684, 918, 922, 2211
CciI	TCATGA	2 cut(s)	123, 1783
CfoI	GCGC	5 cut(s)	437, 472, 477, 1283, 1862
Cfr13I	GGNCC	9 cut(s)	737, 883, 922, 939, 951, 1062, 1063, 1525, 2013
CseI	GACGC	1 cut(s)	527
CsiI	ACCWGGT	2 cut(s)	51, 885
Csp6I	GTAC	3 cut(s)	372, 1180, 1934
CspCI	CAANNNNNGTGG	2 cut(s)	1503, 1538
CviQI	GTAC	3 cut(s)	372, 1180, 1934
DraI	TTTAAA	1 cut(s)	2028
DraIII	CACNNNGTG	1 cut(s)	1156
DrdI	GACNNNNNNGTC	1 cut(s)	2114
DseDI	GACNNNNNNGTC	1 cut(s)	2114
EaeI	YGGCCR	3 cut(s)	390, 1172, 1569
Eam1104I	CTCTTC	1 cut(s)	187
EarI	CTCTTC	1 cut(s)	187
Ecl136II	GAGCTC	2 cut(s)	19, 1833
Eco130I	CCWWGG	1 cut(s)	642
Eco147I	AGGCCT	1 cut(s)	1412
Eco24I	GRGCYC	3 cut(s)	21, 1066, 1835
Eco31I	GGTCTC	2 cut(s)	1514, 1686
Eco32I	GATATC	2 cut(s)	805, 1502
Eco47I	GGWCC	3 cut(s)	737, 883, 939
Eco47III	AGCGCT	1 cut(s)	471
Eco53kI	GAGCTC	2 cut(s)	19, 1833
Eco81I	CCTNAGG	1 cut(s)	1468
Eco88I	CYCGRG	4 cut(s)	90, 446, 535, 1800
EcoICRI	GAGCTC	2 cut(s)	19, 1833
EcoNI	CCTNNNNNAGG	2 cut(s)	42, 914
EcoO109I	RGGNCCY	2 cut(s)	737, 1063
EcoRI	GAATTC	1 cut(s)	1126
EcoRII	CCWGG	6 cut(s)	37, 51, 574, 885, 1825, 2161
EcoRV	GATATC	2 cut(s)	805, 1502
EcoT14I	CCWWGG	1 cut(s)	642
EcoT38I	GRGCYC	3 cut(s)	21, 1066, 1835
ErhI	CCWWGG	1 cut(s)	642
Esp3I	CGTCTC	1 cut(s)	87
FalI	AAGNNNNNCTT	4 cut(s)	1550, 1582, 1695, 1727
FaqI	GGGAC	1 cut(s)	316
FauI	CCCGC	5 cut(s)	142, 340, 913, 1074, 2202
FauNDI	CATATG	1 cut(s)	1456
FbaI	TGATCA	3 cut(s)	108, 823, 1780
FblI	GTMKAC	2 cut(s)	360, 1806
Fnu4HI	GCNGC	4 cut(s)	438, 473, 561, 1528
FriOI	GRGCYC	3 cut(s)	21, 1066, 1835
Fsp4HI	GCNGC	4 cut(s)	438, 473, 561, 1528
FspBI	CTAG	7 cut(s)	411, 674, 911, 1505, 1896, 1937, 2043
GlaI	GCGC	5 cut(s)	436, 471, 476, 1282, 1861
GluI	GCNGC	4 cut(s)	438, 473, 561, 1528
GsaI	CCCAGC	1 cut(s)	1063
GsuI	CTGGAG	1 cut(s)	415
HaeII	RGCGCY	3 cut(s)	438, 473, 1863
HapII	CCGG	2 cut(s)	731, 1002
HgaI	GACGC	1 cut(s)	527
HhaI	GCGC	5 cut(s)	437, 472, 477, 1283, 1862
Hin6I	GCGC	5 cut(s)	435, 470, 475, 1281, 1860
HinP1I	GCGC	5 cut(s)	435, 470, 475, 1281, 1860
HincII	GTYRAC	1 cut(s)	361
HindII	GTYRAC	1 cut(s)	361
HindIII	AAGCTT	4 cut(s)	871, 1374, 1671, 1761
HpaII	CCGG	2 cut(s)	731, 1002
HphI	GGTGA	5 cut(s)	418, 667, 901, 1079, 1324
Hpy166II	GTNNAC	5 cut(s)	361, 658, 1807, 1855, 2145
Hpy188I	TCNGA	7 cut(s)	517, 706, 781, 802, 1722, 1962, 1991
Hpy8I	GTNNAC	5 cut(s)	361, 658, 1807, 1855, 2145
Hpy99I	CGWCG	4 cut(s)	362, 389, 521, 951
HpyAV	CCTTC	8 cut(s)	242, 479, 698, 1279, 1357, 1697, 1973, 2003
HpyCH4III	ACNGT	3 cut(s)	115, 1036, 1154
HpyCH4IV	ACGT	6 cut(s)	387, 417, 662, 946, 1169, 1321
HpyCH4V	TGCA	5 cut(s)	14, 176, 498, 1613, 2239
HpyF10VI	GCNNNNNNNGC	7 cut(s)	495, 692, 861, 870, 1082, 1156, 1257
HpySE526I	ACGT	6 cut(s)	387, 417, 662, 946, 1169, 1321
HspAI	GCGC	5 cut(s)	435, 470, 475, 1281, 1860
Ksp22I	TGATCA	3 cut(s)	108, 823, 1780
LmnI	GCTCC	4 cut(s)	599, 1186, 1257, 1830
Lsp1109I	GCAGC	2 cut(s)	459, 547
LweI	GCATC	4 cut(s)	145, 298, 507, 697
MabI	ACCWGGT	2 cut(s)	51, 885
MaeI	CTAG	7 cut(s)	411, 674, 911, 1505, 1896, 1937, 2043
MaeII	ACGT	6 cut(s)	387, 417, 662, 946, 1169, 1321
MaeIII	GTNAC	4 cut(s)	983, 1322, 1817, 2179
MflI	RGATCY	1 cut(s)	1434
MhlI	GDGCHC	4 cut(s)	21, 1066, 1161, 1835
MlsI	TGGCCA	2 cut(s)	1174, 1571
MluI	ACGCGT	1 cut(s)	1200
MluNI	TGGCCA	2 cut(s)	1174, 1571
MmeI	TCCRAC	3 cut(s)	540, 2059, 2294
Mox20I	TGGCCA	2 cut(s)	1174, 1571
MroXI	GAANNNNTTC	2 cut(s)	609, 662
MscI	TGGCCA	2 cut(s)	1174, 1571
MseI	TTAA	9 cut(s)	747, 1580, 1628, 1662, 1737, 1793, 1908, 2027, 2055
MslI	CAYNNNNRTG	2 cut(s)	1745, 1873
Msp20I	TGGCCA	2 cut(s)	1174, 1571
MspA1I	CMGCKG	4 cut(s)	137, 560, 1195, 1210
MspI	CCGG	2 cut(s)	731, 1002
MspR9I	CCNGG	6 cut(s)	39, 53, 576, 887, 1827, 2163
MteI	GCGCNGCGC	1 cut(s)	473
MvaI	CCWGG	6 cut(s)	39, 53, 576, 887, 1827, 2163
MvnI	CGCG	4 cut(s)	477, 1184, 1202, 1283
MwoI	GCNNNNNNNGC	7 cut(s)	495, 692, 861, 870, 1082, 1156, 1257
NdeI	CATATG	1 cut(s)	1456
NlaIV	GGNNCC	6 cut(s)	739, 953, 1022, 1064, 1065, 2014
NmeAIII	GCCGAG	1 cut(s)	2207
NmuCI	GTSAC	3 cut(s)	983, 1322, 2179
NspI	RCATGY	5 cut(s)	367, 686, 1399, 2243, 2300
PaeI	GCATGC	1 cut(s)	686
PaeR7I	CTCGAG	2 cut(s)	90, 1800
PagI	TCATGA	2 cut(s)	123, 1783
PceI	AGGCCT	1 cut(s)	1412
PciI	ACATGT	2 cut(s)	363, 2296
PcsI	WCGNNNNNNNCGW	2 cut(s)	390, 1158
PdmI	GAANNNNTTC	2 cut(s)	609, 662
PfeI	GAWTC	7 cut(s)	605, 677, 776, 1487, 1787, 1942, 2309
PflMI	CCANNNNNTGG	1 cut(s)	38
PkrI	GCNGC	4 cut(s)	439, 474, 562, 1529
Ple19I	CGATCG	1 cut(s)	1030
Ppu21I	YACGTR	2 cut(s)	418, 1170
PpuMI	RGGWCCY	1 cut(s)	737
PscI	ACATGT	2 cut(s)	363, 2296
Psp124BI	GAGCTC	2 cut(s)	21, 1835
Psp5II	RGGWCCY	1 cut(s)	737
Psp6I	CCWGG	6 cut(s)	37, 51, 574, 885, 1825, 2161
PspFI	CCCAGC	1 cut(s)	1059
PspGI	CCWGG	6 cut(s)	37, 51, 574, 885, 1825, 2161
PspN4I	GGNNCC	6 cut(s)	739, 953, 1022, 1064, 1065, 2014
PspOMI	GGGCCC	1 cut(s)	1062
PspPI	GGNCC	9 cut(s)	737, 883, 922, 939, 951, 1062, 1063, 1525, 2013
PspPPI	RGGWCCY	1 cut(s)	737
PspXI	VCTCGAGB	1 cut(s)	1800
PstI	CTGCAG	1 cut(s)	16
PsuI	RGATCY	1 cut(s)	1434
PvuI	CGATCG	1 cut(s)	1030
PvuII	CAGCTG	3 cut(s)	560, 1195, 1210
RsaI	GTAC	3 cut(s)	373, 1181, 1935
RsaNI	GTAC	3 cut(s)	372, 1180, 1934
RseI	CAYNNNNRTG	2 cut(s)	1745, 1873
SacI	GAGCTC	2 cut(s)	21, 1835
SalI	GTCGAC	1 cut(s)	359
SaqAI	TTAA	9 cut(s)	747, 1580, 1628, 1662, 1737, 1793, 1908, 2027, 2055
SatI	GCNGC	4 cut(s)	438, 473, 561, 1528
Sau96I	GGNCC	9 cut(s)	737, 883, 922, 939, 951, 1062, 1063, 1525, 2013
ScrFI	CCNGG	6 cut(s)	39, 53, 576, 887, 1827, 2163
SduI	GDGCHC	4 cut(s)	21, 1066, 1161, 1835
SexAI	ACCWGGT	2 cut(s)	51, 885
SfaNI	GCATC	4 cut(s)	145, 298, 507, 697
SfcI	CTRYAG	4 cut(s)	12, 840, 1252, 2128
Sfr274I	CTCGAG	2 cut(s)	90, 1800
SinI	GGWCC	3 cut(s)	737, 883, 939
SlaI	CTCGAG	2 cut(s)	90, 1800
SmiMI	CAYNNNNRTG	2 cut(s)	1745, 1873
SmlI	CTYRAG	4 cut(s)	65, 90, 1136, 1800
SmoI	CTYRAG	4 cut(s)	65, 90, 1136, 1800
SpeI	ACTAGT	1 cut(s)	1936
SphI	GCATGC	1 cut(s)	686
SseBI	AGGCCT	1 cut(s)	1412
SspI	AATATT	2 cut(s)	2218, 2263
SspMI	CTAG	7 cut(s)	411, 674, 911, 1505, 1896, 1937, 2043
SstI	GAGCTC	2 cut(s)	21, 1835
StuI	AGGCCT	1 cut(s)	1412
StyD4I	CCNGG	6 cut(s)	37, 51, 574, 885, 1825, 2161
StyI	CCWWGG	1 cut(s)	642
TaaI	ACNGT	3 cut(s)	115, 1036, 1154
TaiI	ACGT	6 cut(s)	390, 420, 665, 949, 1172, 1324
TaqI	TCGA	9 cut(s)	91, 165, 340, 360, 384, 501, 1026, 1030, 1801
TauI	GCSGC	2 cut(s)	440, 1530
TfiI	GAWTC	7 cut(s)	605, 677, 776, 1487, 1787, 1942, 2309
Tru1I	TTAA	9 cut(s)	747, 1580, 1628, 1662, 1737, 1793, 1908, 2027, 2055
Tru9I	TTAA	9 cut(s)	747, 1580, 1628, 1662, 1737, 1793, 1908, 2027, 2055
TscAI	CASTG	2 cut(s)	118, 157
TseFI	GTSAC	3 cut(s)	983, 1322, 2179
TseI	GCWGC	2 cut(s)	472, 560
Tsp45I	GTSAC	3 cut(s)	983, 1322, 2179
TspDTI	ATGAA	9 cut(s)	16, 140, 202, 680, 690, 777, 1331, 1800, 1992
TspGWI	ACGGA	1 cut(s)	260
TspRI	CASTG	2 cut(s)	118, 157
Van91I	CCANNNNNTGG	1 cut(s)	38
VpaK11BI	GGWCC	3 cut(s)	737, 883, 939
XagI	CCTNNNNNAGG	2 cut(s)	42, 914
XapI	RAATTY	2 cut(s)	1126, 2166
XbaI	TCTAGA	1 cut(s)	1895
XceI	RCATGY	5 cut(s)	367, 686, 1399, 2243, 2300
XcmI	CCANNNNNNNNNTGG	2 cut(s)	649, 1872
XhoI	CTCGAG	2 cut(s)	90, 1800
XmiI	GTMKAC	2 cut(s)	360, 1806
XmnI	GAANNNNTTC	2 cut(s)	609, 662
XspI	CTAG	7 cut(s)	411, 674, 911, 1505, 1896, 1937, 2043

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.