AT4G15260

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
8713689 .. 8715380
1692 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15260.1

Sequence Viewer

Length: 1080 bp
ATGTTCTGTTCTTCAATGATCGATATAGCTAACGAATTTGGAGTTCCTTGTTATATGATCTACACATCAAACGCTACGTTTTTGGGAATCACACTTCACGTTCAAGAAATGTACGACGACAAAAAGTATGACGTCAGCGATTTGGATGAGTCAGTCAACGAATTGGAGTTTCCTTGTTTGACTCGTCCTTATCCAGTGAAGTGCCTTCCTCATATCCTTAGTTCAAAAGATTGGTTACCTTTTTTTGCAGCTCAAGGTAGGTCTTTCCGGAAGATGAAAGGTATTTTGGTAAATACAGTTGCTGAGCTTGAGCCTCACGCTTTGAAGATGTTTAACAATGTTGATCTTCCTCAAGCTTATCCTGTTGGACCAGTGTTGCATCTTGATAACGGCGATGACGACGATGAAAAGAGATTGGAGGTTTTGCGGTGGCTTGATGATCAACCGCCTAAATCTGTTTTGTTTCTCTGTTTTGGAAGTATGGGAGGTTTCACTGAGGAACAAACTAGAGAGGTAGCTGTGGCGTTAAACCGAAGTGGTCACCGGTTTCTTTGGTCTCTCCGTCGTGCATCGCCGAATATAATGATGGAACGTCCCGGAGATTATAAGAATCTTGAGGAGGTTTTACCGGACGGGTTCTTGGAACGGACTTTGGATAGAGGGAAAGTGATTGGATGGGCTCCACAAGTGGCGGTGTTAGAGAAGCCGGCGATAGGAGGGTTTGTTACTCATTGTGGGTGGAACTCTATGTTAGAGAGCTTGTGGTTTGGTGTTCCGATGGTGACGTGGCCGCTTTACGCGGAGCAGAAGGTTAACGCGTTTGAGATGGTGGAGGAGCTGGGATTGGCGGTGGAGATACGTAAGTGCATTAGTGGAGATTTGTTGTTGATCGGAGAGATGGAGATAGTGACGGCGGAGGATATAGAGAGAGCTATAAGGTGTGTGATGGAGCAGGATAGTGATGTAAGGAGTCGAGTGAAGGAGATGGCGGAGAAGTGTCACGTGGCGTTGATGGACGGTGGATCTTCCAAGACGGCTTTGCAAAAGTTTATTCAAGACGTGATAGAGAATGTTGCTTAA

Protein Analysis

359

Amino Acids

40.62

Weight (kDa)

4.84

Isoelectric Point (pI)

55.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 150 - 293 2e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 606
AatII GACGTC 1 cut(s) 135
AccII CGCG 2 cut(s) 800, 818
AccIII TCCGGA 1 cut(s) 267
AciI CCGC 8 cut(s) 427, 446, 692, 791, 800, 848, 914, 989
AclWI GGATC 1 cut(s) 1030
AcoI YGGCCR 1 cut(s) 788
AcsI RAATTY 1 cut(s) 35
AcvI CACGTG 1 cut(s) 1003
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 1 cut(s) 113
AfiI CCNNNNNNNGG 1 cut(s) 713
AflIII ACRYGT 1 cut(s) 816
AgeI ACCGGT 1 cut(s) 543
AgsI TTSAA 5 cut(s) 15, 104, 225, 325, 1055
AjiI CACGTC 2 cut(s) 786, 1060
AjuI GAANNNNNNNTTGG 2 cut(s) 269, 301
AluBI AGCT 8 cut(s) 29, 251, 307, 356, 518, 759, 838, 932
AluI AGCT 8 cut(s) 29, 251, 307, 356, 518, 759, 838, 932
Alw26I GTCTC 1 cut(s) 561
AlwI GGATC 1 cut(s) 1030
AlwNI CAGNNNCTG 1 cut(s) 302
Aor13HI TCCGGA 1 cut(s) 267
AoxI GGCC 1 cut(s) 788
ApeKI GCWGC 1 cut(s) 248
ApoI RAATTY 1 cut(s) 35
AsiGI ACCGGT 1 cut(s) 543
AspS9I GGNCC 1 cut(s) 368
AsuC2I CCSGG 1 cut(s) 597
AsuHPI GGTGA 2 cut(s) 533, 793
AvaII GGWCC 1 cut(s) 368
BaeI ACNNNNGTAYC 2 cut(s) 848, 881
BanII GRGCYC 1 cut(s) 682
BbrPI CACGTG 1 cut(s) 1003
BbvI GCAGC 1 cut(s) 260
BccI CCATC 8 cut(s) 580, 669, 772, 820, 892, 940, 979, 1006
BceAI ACGGC 3 cut(s) 406, 927, 1050
BclI TGATCA 1 cut(s) 439
BcnI CCSGG 1 cut(s) 597
BcoDI GTCTC 1 cut(s) 561
BfaI CTAG 1 cut(s) 507
BisI GCNGC 2 cut(s) 249, 791
BlpI GCTNAGC 1 cut(s) 303
BlsI GCNGC 2 cut(s) 250, 792
Bme1390I CCNGG 1 cut(s) 597
Bme18I GGWCC 1 cut(s) 368
BmgBI CACGTC 2 cut(s) 786, 1060
BmgT120I GGNCC 1 cut(s) 368
BmiI GGNNCC 1 cut(s) 681
BmrFI CCNGG 1 cut(s) 597
BmsI GCATC 2 cut(s) 388, 578
Bpu1102I GCTNAGC 1 cut(s) 303
BpuEI CTTGAG 4 cut(s) 237, 329, 336, 635
BpuMI CCSGG 1 cut(s) 597
Bsa29I ATCGAT 1 cut(s) 21
BsaAI YACGTR 2 cut(s) 860, 1003
BsaHI GRCGYC 1 cut(s) 132
BsaI GGTCTC 1 cut(s) 561
BsaWI WCCGGW 3 cut(s) 267, 543, 628
BsaXI ACNNNNNCTCC 2 cut(s) 708, 738
Bsc4I CCNNNNNNNGG 1 cut(s) 713
Bse118I RCCGGY 2 cut(s) 543, 706
Bse1I ACTGG 2 cut(s) 194, 371
BseAI TCCGGA 1 cut(s) 267
BseCI ATCGAT 1 cut(s) 21
BseGI GGATG 2 cut(s) 151, 680
BseLI CCNNNNNNNGG 1 cut(s) 713
BseMII CTCAG 2 cut(s) 294, 486
BseNI ACTGG 2 cut(s) 194, 371
BseRI GAGGAG 2 cut(s) 632, 848
BseXI GCAGC 1 cut(s) 260
BseYI CCCAGC 1 cut(s) 838
Bsh1236I CGCG 2 cut(s) 800, 818
BshFI GGCC 1 cut(s) 790
BshTI ACCGGT 1 cut(s) 543
BshVI ATCGAT 1 cut(s) 21
BsiSI CCGG 5 cut(s) 268, 544, 597, 629, 707
BslFI GGGAC 1 cut(s) 579
BslI CCNNNNNNNGG 1 cut(s) 713
BsmAI GTCTC 1 cut(s) 561
BsmFI GGGAC 1 cut(s) 579
BsnI GGCC 1 cut(s) 790
Bso31I GGTCTC 1 cut(s) 561
Bsp1286I GDGCHC 1 cut(s) 682
Bsp13I TCCGGA 1 cut(s) 267
Bsp143I GATC 6 cut(s) 18, 57, 343, 439, 888, 1022
Bsp1720I GCTNAGC 1 cut(s) 303
BspACI CCGC 8 cut(s) 427, 446, 692, 791, 800, 848, 914, 989
BspANI GGCC 1 cut(s) 790
BspCNI CTCAG 2 cut(s) 295, 487
BspDI ATCGAT 1 cut(s) 21
BspEI TCCGGA 1 cut(s) 267
BspFNI CGCG 2 cut(s) 800, 818
BspLI GGNNCC 1 cut(s) 681
BspPI GGATC 1 cut(s) 1030
BspTNI GGTCTC 1 cut(s) 561
BsrFI RCCGGY 2 cut(s) 543, 706
BsrI ACTGG 2 cut(s) 194, 371
BssAI RCCGGY 2 cut(s) 543, 706
BssMI GATC 6 cut(s) 18, 57, 343, 439, 888, 1022
BssNI GRCGYC 1 cut(s) 132
Bst4CI ACNGT 2 cut(s) 298, 1019
BstACI GRCGYC 1 cut(s) 132
BstBAI YACGTR 2 cut(s) 860, 1003
BstC8I GCNNGC 1 cut(s) 708
BstDEI CTNAG 3 cut(s) 218, 303, 495
BstEII GGTNACC 2 cut(s) 234, 539
BstF5I GGATG 2 cut(s) 151, 680
BstFNI CGCG 2 cut(s) 800, 818
BstKTI GATC 6 cut(s) 21, 60, 346, 442, 891, 1025
BstMAI GTCTC 1 cut(s) 561
BstMBI GATC 6 cut(s) 18, 57, 343, 439, 888, 1022
BstPI GGTNACC 2 cut(s) 234, 539
BstSCI CCNGG 1 cut(s) 595
BstSNI TACGTA 1 cut(s) 860
BstUI CGCG 2 cut(s) 800, 818
BstV1I GCAGC 1 cut(s) 260
BstX2I RGATCY 1 cut(s) 1022
BstYI RGATCY 1 cut(s) 1022
Bsu15I ATCGAT 1 cut(s) 21
BsuRI GGCC 1 cut(s) 790
BsuTUI ATCGAT 1 cut(s) 21
BtgZI GCGATG 2 cut(s) 408, 555
BtrI CACGTC 2 cut(s) 786, 1060
BtsCI GGATG 2 cut(s) 151, 680
BtsIMutI CAGTG 3 cut(s) 201, 378, 492
Cac8I GCNNGC 1 cut(s) 708
CaiI CAGNNNCTG 1 cut(s) 302
Cfr10I RCCGGY 2 cut(s) 543, 706
Cfr13I GGNCC 1 cut(s) 368
ClaI ATCGAT 1 cut(s) 21
Csp6I GTAC 1 cut(s) 112
CspAI ACCGGT 1 cut(s) 543
CviQI GTAC 1 cut(s) 112
DdeI CTNAG 3 cut(s) 218, 303, 495
DpnI GATC 6 cut(s) 20, 59, 345, 441, 890, 1024
DpnII GATC 6 cut(s) 18, 57, 343, 439, 888, 1022
EaeI YGGCCR 1 cut(s) 788
EciI GGCGGA 2 cut(s) 929, 1004
Eco105I TACGTA 1 cut(s) 860
Eco24I GRGCYC 1 cut(s) 682
Eco31I GGTCTC 1 cut(s) 561
Eco47I GGWCC 1 cut(s) 368
Eco72I CACGTG 1 cut(s) 1003
Eco91I GGTNACC 2 cut(s) 234, 539
EcoO65I GGTNACC 2 cut(s) 234, 539
EcoT38I GRGCYC 1 cut(s) 682
FaqI GGGAC 1 cut(s) 579
FbaI TGATCA 1 cut(s) 439
Fnu4HI GCNGC 2 cut(s) 249, 791
FokI GGATG 2 cut(s) 158, 687
FriOI GRGCYC 1 cut(s) 682
Fsp4HI GCNGC 2 cut(s) 249, 791
FspBI CTAG 1 cut(s) 507
GluI GCNGC 2 cut(s) 249, 791
GsaI CCCAGC 1 cut(s) 842
HaeIII GGCC 1 cut(s) 790
HapII CCGG 5 cut(s) 268, 544, 597, 629, 707
Hin1I GRCGYC 1 cut(s) 132
HincII GTYRAC 2 cut(s) 157, 814
HindII GTYRAC 2 cut(s) 157, 814
HindIII AAGCTT 1 cut(s) 354
HinfI GANTC 5 cut(s) 87, 149, 181, 610, 970
HpaI GTTAAC 1 cut(s) 814
HpaII CCGG 5 cut(s) 268, 544, 597, 629, 707
HphI GGTGA 2 cut(s) 533, 793
Hpy166II GTNNAC 2 cut(s) 157, 814
Hpy188I TCNGA 2 cut(s) 777, 893
Hpy188III TCNNGA 5 cut(s) 104, 268, 383, 614, 1055
Hpy8I GTNNAC 2 cut(s) 157, 814
Hpy99I CGWCG 3 cut(s) 119, 404, 567
HpyAV CCTTC 3 cut(s) 215, 802, 973
HpyCH4III ACNGT 2 cut(s) 298, 1019
HpyCH4IV ACGT 8 cut(s) 77, 99, 132, 592, 785, 859, 1002, 1059
HpyCH4V TGCA 5 cut(s) 248, 379, 569, 867, 1042
HpyF3I CTNAG 3 cut(s) 218, 303, 495
HpySE526I ACGT 8 cut(s) 77, 99, 132, 592, 785, 859, 1002, 1059
Hsp92I GRCGYC 1 cut(s) 132
Kpn2I TCCGGA 1 cut(s) 267
KroI GCCGGC 1 cut(s) 706
KroNI GCCGGC 1 cut(s) 708
Ksp22I TGATCA 1 cut(s) 439
KspAI GTTAAC 1 cut(s) 814
Kzo9I GATC 6 cut(s) 18, 57, 343, 439, 888, 1022
LmnI GCTCC 4 cut(s) 685, 802, 835, 949
Lsp1109I GCAGC 1 cut(s) 260
LweI GCATC 2 cut(s) 388, 578
MaeI CTAG 1 cut(s) 507
MaeII ACGT 8 cut(s) 77, 99, 132, 592, 785, 859, 1002, 1059
MaeIII GTNAC 6 cut(s) 234, 539, 724, 781, 907, 998
MalI GATC 6 cut(s) 20, 59, 345, 441, 890, 1024
MboI GATC 6 cut(s) 18, 57, 343, 439, 888, 1022
MboII GAAGA 5 cut(s) 3, 283, 337, 338, 1017
MflI RGATCY 1 cut(s) 1022
MhlI GDGCHC 1 cut(s) 682
MluCI AATT 2 cut(s) 35, 161
MluI ACGCGT 1 cut(s) 816
MlyI GAGTC 3 cut(s) 158, 175, 979
MmeI TCCRAC 1 cut(s) 346
MroI TCCGGA 1 cut(s) 267
MroNI GCCGGC 1 cut(s) 706
MseI TTAA 4 cut(s) 333, 527, 813, 1078
MspI CCGG 5 cut(s) 268, 544, 597, 629, 707
MspR9I CCNGG 1 cut(s) 597
MvnI CGCG 2 cut(s) 800, 818
NaeI GCCGGC 1 cut(s) 708
NciI CCSGG 1 cut(s) 597
NdeII GATC 6 cut(s) 18, 57, 343, 439, 888, 1022
NgoMIV GCCGGC 1 cut(s) 706
NlaIV GGNNCC 1 cut(s) 681
NmuCI GTSAC 4 cut(s) 539, 781, 907, 998
PcsI WCGNNNNNNNCGW 1 cut(s) 396
PdiI GCCGGC 1 cut(s) 708
PfeI GAWTC 2 cut(s) 87, 610
PfoI TCCNGGA 1 cut(s) 595
PinAI ACCGGT 1 cut(s) 543
PkrI GCNGC 2 cut(s) 250, 792
PleI GAGTC 3 cut(s) 157, 175, 978
PmaCI CACGTG 1 cut(s) 1003
PmlI CACGTG 1 cut(s) 1003
PpsI GAGTC 3 cut(s) 157, 175, 978
Ppu21I YACGTR 2 cut(s) 860, 1003
PsiI TTATAA 1 cut(s) 606
PspCI CACGTG 1 cut(s) 1003
PspEI GGTNACC 2 cut(s) 234, 539
PspFI CCCAGC 1 cut(s) 838
PspN4I GGNNCC 1 cut(s) 681
PspPI GGNCC 1 cut(s) 368
PstNI CAGNNNCTG 1 cut(s) 302
PsuI RGATCY 1 cut(s) 1022
RsaI GTAC 1 cut(s) 113
RsaNI GTAC 1 cut(s) 112
SaqAI TTAA 4 cut(s) 333, 527, 813, 1078
SatI GCNGC 2 cut(s) 249, 791
Sau3AI GATC 6 cut(s) 18, 57, 343, 439, 888, 1022
Sau96I GGNCC 1 cut(s) 368
SchI GAGTC 3 cut(s) 158, 175, 979
ScrFI CCNGG 1 cut(s) 597
SduI GDGCHC 1 cut(s) 682
SfaNI GCATC 2 cut(s) 388, 578
SinI GGWCC 1 cut(s) 368
SmlI CTYRAG 4 cut(s) 252, 308, 351, 614
SmoI CTYRAG 4 cut(s) 252, 308, 351, 614
SnaBI TACGTA 1 cut(s) 860
Sse9I AATT 2 cut(s) 35, 161
SsiI CCGC 8 cut(s) 427, 446, 692, 791, 800, 848, 914, 989
SspMI CTAG 1 cut(s) 507
StyD4I CCNGG 1 cut(s) 595
TaaI ACNGT 2 cut(s) 298, 1019
TaiI ACGT 8 cut(s) 80, 102, 135, 595, 788, 862, 1005, 1062
TaqI TCGA 2 cut(s) 21, 973
TasI AATT 2 cut(s) 35, 161
TauI GCSGC 1 cut(s) 793
TfiI GAWTC 2 cut(s) 87, 610
Tru1I TTAA 4 cut(s) 333, 527, 813, 1078
Tru9I TTAA 4 cut(s) 333, 527, 813, 1078
TscAI CASTG 3 cut(s) 201, 378, 499
TseFI GTSAC 4 cut(s) 539, 781, 907, 998
TseI GCWGC 1 cut(s) 248
Tsp45I GTSAC 4 cut(s) 539, 781, 907, 998
TspDTI ATGAA 2 cut(s) 290, 420
TspGWI ACGGA 2 cut(s) 551, 661
TspRI CASTG 3 cut(s) 201, 378, 499
VpaK11BI GGWCC 1 cut(s) 368
XapI RAATTY 1 cut(s) 35
XspI CTAG 1 cut(s) 507
ZraI GACGTC 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.