Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

28590660 .. 28592093

Gene Structure 1434 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G012860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGAAGCAATCGGCAGAGCTAGTGTTCATCCCATCCCCAGGCATTGGCCACCTCGTGGCTACGGTGGAGGTCGCAAAGCTCCTCCTGTCTCGAGATGATCAACTCTTCATCACCGTCCTCATCATTAAGTTCCCGTTCAGCACAGACGGCACCGATGCCTACGTTGAGTCCTTCTCGGACTCTTCCATATCACATCGGATCAAGTTCATCAACCTCCCACAGCAGAATATTGAGACACAAGGTAATAGCACCATCAACTTCTTGAACTTCATTGACAATCAGCAAACCAACGTTAAAGATGTTGTCGCCAAACTCATCGAGTCCGAGACCAAGAATCGACTCGCCGGGTTTGTCATCGACATGTTTTGTACCTCTATGATCGACGTAGCCAACGAATTAGGGGTTCCTACCTACATGTTTTTCACATCCCCCGCCTCCATGCTCGGGCTCATGTTCCACCTTCAAGCACTTCGTGATGATCACAACAAGGACTGCATTGAGTTCAAGGACACAACTGCTGATTTGGGAGTCCCGAGTTACTCCAACCCCTTGCCAGCTAGAATCTTACCTAGTTTCCTTCTCGAAAAGGAGACCGGCAACAGGTCCCTCAACTTGGCCAAAAGGTTTAGAGATGTCAAGGGTATTTTGATAAATACATTCACAGAGCTGGAGTCGCACGCCCTTCTTTCTCTCAGTTCTGATGGTAAGCTCCCTCCGGTGTATCCGGCGGGACCCATACTAAACGTGAAGAGCGATGACAACAATGACCAAGTGGATTCGAAGCAGTCGAAGCAAAAGTCTGATATCTTGAAATGGCTCGATGATCAGCCTCCGTCGTCTGTAGTGTTTCTGTGCTTCGGGAGTATGGGAAGCTTCAGTGAAGACCAGGTGAAAGAGATTGCCCGTGCATTGGAGCATGCAGGGCTTCGGTTCTTGTGGTCCCTACGTCAGCCTCCACCAAAGGGACAGATTGGAATGCCCAGCGACTATGCCGATCACACAGGGGTGTTACCTGAAGGGTTTCTTGATCGAACGGCTGGGGTCGGAAAAGTTATAGGGTGGGCGCCACAAGTTGCCATCTTAGCCCACCCGGCAGTCGGAGGTTTCGTCTCTCACTGTGGGTGGAATTCCATTCTGGAGAGCTTGTGGTTTGGAGTGCCGGTTGCCACGTGGCCCTTGTATTCCGAGCAACAACTAAATGCATTTCAGCTAGTTACGGAACTAGGGATAGCCGTGGAAATTGATATGAGTTATAGGAAGGATGGTCCAGTTGTTGTGACTGCAGAGAAGATTCAGAGTGGAATAACGGAGCTAATGGAGCTTGATAGTGATATAAGGAAGAGGGTGAAACAGATGAGTGATAATAGCAAGAAAGCTTTAATGGATGGGGGGTCCTCATATGCTGCGTTCGGACAATTCCTTGATCAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

477

Amino Acids

52.63

Weight (kDa)

5.1

Isoelectric Point (pI)

49.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	269 - 416	7.4e-24	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	149, 1063
AccB7I	CCANNNNNTGG	2 cut(s)	44, 55
AciI	CCGC	2 cut(s)	432, 728
AclI	AACGTT	1 cut(s)	291
AclWI	GGATC	1 cut(s)	206
AcoI	YGGCCR	2 cut(s)	46, 615
AcsI	RAATTY	2 cut(s)	1126, 1428
AcuI	CTGAAG	2 cut(s)	859, 1035
AcvI	CACGTG	1 cut(s)	1170
AcyI	GRCGYC	1 cut(s)	1064
AdeI	CACNNNGTG	2 cut(s)	55, 473
AfaI	GTAC	1 cut(s)	370
AfiI	CCNNNNNNNGG	9 cut(s)	38, 44, 55, 444, 600, 613, 910, 962, 1097
AflIII	ACRYGT	2 cut(s)	360, 414
AgsI	TTSAA	4 cut(s)	265, 464, 505, 811
AjnI	CCWGG	2 cut(s)	37, 885
AleI	CACNNNNGTG	1 cut(s)	1004
Alw26I	GTCTC	5 cut(s)	93, 227, 320, 584, 1114
AlwI	GGATC	1 cut(s)	206
Ama87I	CYCGRG	3 cut(s)	90, 443, 532
AoxI	GGCC	3 cut(s)	46, 615, 1172
ApeKI	GCWGC	1 cut(s)	1403
ApoI	RAATTY	2 cut(s)	1126, 1428
ArsI	GACNNNNNNTTYG	2 cut(s)	782, 814
Asp700I	GAANNNNTTC	1 cut(s)	1020
AspLEI	GCGC	1 cut(s)	1066
AspS9I	GGNCC	6 cut(s)	603, 731, 939, 1173, 1265, 1392
AsuC2I	CCSGG	2 cut(s)	346, 1091
AsuHPI	GGTGA	3 cut(s)	103, 901, 1357
AsuII	TTCGAA	1 cut(s)	779
AvaI	CYCGRG	3 cut(s)	90, 443, 532
AvaII	GGWCC	5 cut(s)	603, 731, 939, 1265, 1392
BalI	TGGCCA	2 cut(s)	48, 617
BanI	GGYRCC	2 cut(s)	149, 1063
BanII	GRGCYC	1 cut(s)	450
BauI	CACGAG	1 cut(s)	53
BbrPI	CACGTG	1 cut(s)	1170
BbsI	GAAGAC	1 cut(s)	888
BbvI	GCAGC	1 cut(s)	1390
BccI	CCATC	6 cut(s)	40, 260, 695, 1085, 1256, 1379
BceAI	ACGGC	3 cut(s)	163, 1050, 1217
BciT130I	CCWGG	2 cut(s)	39, 887
BciVI	GTATCC	1 cut(s)	732
BclI	TGATCA	4 cut(s)	97, 478, 823, 1423
BcnI	CCSGG	2 cut(s)	346, 1091
BcoDI	GTCTC	5 cut(s)	93, 227, 320, 584, 1114
BfaI	CTAG	5 cut(s)	20, 558, 570, 1211, 1223
BfmI	CTRYAG	2 cut(s)	840, 1281
BfoI	RGCGCY	1 cut(s)	1067
BfuI	GTATCC	1 cut(s)	732
BglI	GCCNNNNNGGC	1 cut(s)	1091
BisI	GCNGC	1 cut(s)	1404
BlsI	GCNGC	1 cut(s)	1405
Bme1390I	CCNGG	4 cut(s)	39, 346, 887, 1091
Bme18I	GGWCC	5 cut(s)	603, 731, 939, 1265, 1392
BmeT110I	CYCGRG	3 cut(s)	90, 443, 532
BmgT120I	GGNCC	6 cut(s)	603, 731, 939, 1173, 1265, 1392
BmiI	GGNNCC	8 cut(s)	151, 405, 605, 732, 733, 941, 1065, 1393
BmrFI	CCNGG	4 cut(s)	39, 346, 887, 1091
BmsI	GCATC	1 cut(s)	145
BpiI	GAAGAC	1 cut(s)	888
BplI	GAGNNNNNCTC	2 cut(s)	158, 190
BpmI	CTGGAG	2 cut(s)	689, 1157
Bpu14I	TTCGAA	1 cut(s)	779
BpuMI	CCSGG	2 cut(s)	346, 1091
BsaAI	YACGTR	1 cut(s)	1170
BsaHI	GRCGYC	1 cut(s)	1064
BsaI	GGTCTC	2 cut(s)	320, 584
BsaJI	CCNNGG	2 cut(s)	37, 1233
BsaWI	WCCGGW	1 cut(s)	715
BsaXI	ACNNNNNCTCC	6 cut(s)	1092, 1122, 1130, 1146, 1160, 1176
Bsc4I	CCNNNNNNNGG	9 cut(s)	38, 44, 55, 444, 600, 613, 910, 962, 1097
Bse118I	RCCGGY	2 cut(s)	593, 1159
Bse1I	ACTGG	1 cut(s)	1268
BseBI	CCWGG	2 cut(s)	39, 887
BseDI	CCNNGG	2 cut(s)	37, 1233
BseGI	GGATG	5 cut(s)	27, 32, 425, 1267, 1390
BseLI	CCNNNNNNNGG	9 cut(s)	38, 44, 55, 444, 600, 613, 910, 962, 1097
BseMII	CTCAG	1 cut(s)	706
BseNI	ACTGG	1 cut(s)	1268
BseRI	GAGGAG	1 cut(s)	71
BseXI	GCAGC	1 cut(s)	1390
BseYI	CCCAGC	2 cut(s)	980, 1037
BshFI	GGCC	3 cut(s)	48, 617, 1174
BshNI	GGYRCC	2 cut(s)	149, 1063
BsiHKCI	CYCGRG	3 cut(s)	90, 443, 532
BsiSI	CCGG	6 cut(s)	345, 594, 716, 725, 1091, 1160
BslFI	GGGAC	5 cut(s)	515, 589, 744, 925, 978
BslI	CCNNNNNNNGG	9 cut(s)	38, 44, 55, 444, 600, 613, 910, 962, 1097
BsmAI	GTCTC	5 cut(s)	93, 227, 320, 584, 1114
BsmBI	CGTCTC	1 cut(s)	1114
BsmFI	GGGAC	5 cut(s)	515, 589, 744, 925, 978
BsmI	GAATGC	1 cut(s)	981
BsnI	GGCC	3 cut(s)	48, 617, 1174
Bso31I	GGTCTC	2 cut(s)	320, 584
BsoBI	CYCGRG	3 cut(s)	90, 443, 532
Bsp119I	TTCGAA	1 cut(s)	779
Bsp1286I	GDGCHC	1 cut(s)	450
Bsp143I	GATC	8 cut(s)	97, 198, 378, 478, 823, 994, 1027, 1423
BspACI	CCGC	2 cut(s)	432, 728
BspANI	GGCC	3 cut(s)	48, 617, 1174
BspCNI	CTCAG	1 cut(s)	705
BspLI	GGNNCC	8 cut(s)	151, 405, 605, 732, 733, 941, 1065, 1393
BspMAI	CTGCAG	1 cut(s)	1285
BspPI	GGATC	1 cut(s)	206
BspQI	GCTCTTC	1 cut(s)	743
BspT104I	TTCGAA	1 cut(s)	779
BspT107I	GGYRCC	2 cut(s)	149, 1063
BspTNI	GGTCTC	2 cut(s)	320, 584
BsrFI	RCCGGY	2 cut(s)	593, 1159
BsrI	ACTGG	1 cut(s)	1268
BssAI	RCCGGY	2 cut(s)	593, 1159
BssECI	CCNNGG	2 cut(s)	37, 1233
BssMI	GATC	8 cut(s)	97, 198, 378, 478, 823, 994, 1027, 1423
BssNI	GRCGYC	1 cut(s)	1064
BssSI	CACGAG	1 cut(s)	53
Bst2BI	CACGAG	1 cut(s)	53
Bst2UI	CCWGG	2 cut(s)	39, 887
Bst4CI	ACNGT	3 cut(s)	64, 115, 1118
Bst6I	CTCTTC	4 cut(s)	110, 187, 743, 1334
BstACI	GRCGYC	1 cut(s)	1064
BstBAI	YACGTR	1 cut(s)	1170
BstBI	TTCGAA	1 cut(s)	779
BstC8I	GCNNGC	3 cut(s)	555, 678, 918
BstDEI	CTNAG	2 cut(s)	692, 1081
BstDSI	CCRYGG	1 cut(s)	1233
BstF5I	GGATG	5 cut(s)	27, 32, 425, 1267, 1390
BstH2I	RGCGCY	1 cut(s)	1067
BstHHI	GCGC	1 cut(s)	1066
BstKTI	GATC	8 cut(s)	100, 201, 381, 481, 826, 997, 1030, 1426
BstMAI	GTCTC	5 cut(s)	93, 227, 320, 584, 1114
BstMBI	GATC	8 cut(s)	97, 198, 378, 478, 823, 994, 1027, 1423
BstMWI	GCNNNNNNNGC	7 cut(s)	147, 673, 790, 922, 1082, 1091, 1318
BstNI	CCWGG	2 cut(s)	39, 887
BstNSI	RCATGY	3 cut(s)	364, 418, 920
BstSCI	CCNGG	4 cut(s)	37, 344, 885, 1089
BstSFI	CTRYAG	2 cut(s)	840, 1281
BstV1I	GCAGC	1 cut(s)	1390
BstV2I	GAAGAC	1 cut(s)	888
BsuI	GTATCC	1 cut(s)	732
BsuRI	GGCC	3 cut(s)	48, 617, 1174
BtgI	CCRYGG	1 cut(s)	1233
BtgZI	GCGATG	1 cut(s)	768
BtsCI	GGATG	5 cut(s)	27, 32, 425, 1267, 1390
BtsIMutI	CAGTG	2 cut(s)	883, 1114
Cac8I	GCNNGC	3 cut(s)	555, 678, 918
CfoI	GCGC	1 cut(s)	1066
Cfr10I	RCCGGY	2 cut(s)	593, 1159
Cfr13I	GGNCC	6 cut(s)	603, 731, 939, 1173, 1265, 1392
CsiI	ACCWGGT	1 cut(s)	885
Csp6I	GTAC	1 cut(s)	369
CviAII	CATG	5 cut(s)	361, 415, 439, 451, 917
CviQI	GTAC	1 cut(s)	369
DdeI	CTNAG	2 cut(s)	692, 1081
DinI	GGCGCC	1 cut(s)	1065
DpnI	GATC	8 cut(s)	99, 200, 380, 480, 825, 996, 1029, 1425
DpnII	GATC	8 cut(s)	97, 198, 378, 478, 823, 994, 1027, 1423
DraIII	CACNNNGTG	2 cut(s)	55, 473
EaeI	YGGCCR	2 cut(s)	46, 615
Eam1104I	CTCTTC	4 cut(s)	110, 187, 743, 1334
EarI	CTCTTC	4 cut(s)	110, 187, 743, 1334
Eco24I	GRGCYC	1 cut(s)	450
Eco31I	GGTCTC	2 cut(s)	320, 584
Eco32I	GATATC	1 cut(s)	805
Eco47I	GGWCC	5 cut(s)	603, 731, 939, 1265, 1392
Eco57I	CTGAAG	2 cut(s)	859, 1035
Eco72I	CACGTG	1 cut(s)	1170
Eco88I	CYCGRG	3 cut(s)	90, 443, 532
EcoO109I	RGGNCCY	3 cut(s)	603, 731, 1392
EcoRI	GAATTC	1 cut(s)	1126
EcoRII	CCWGG	2 cut(s)	37, 885
EcoRV	GATATC	1 cut(s)	805
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	1 cut(s)	450
EgeI	GGCGCC	1 cut(s)	1065
EheI	GGCGCC	1 cut(s)	1065
Esp3I	CGTCTC	1 cut(s)	1114
FaeI	CATG	5 cut(s)	364, 418, 442, 454, 920
FalI	AAGNNNNNCTT	2 cut(s)	1008, 1040
FaqI	GGGAC	5 cut(s)	515, 589, 744, 925, 978
FatI	CATG	5 cut(s)	360, 414, 438, 450, 916
FauI	CCCGC	2 cut(s)	439, 721
FauNDI	CATATG	1 cut(s)	1399
FbaI	TGATCA	4 cut(s)	97, 478, 823, 1423
Fnu4HI	GCNGC	1 cut(s)	1404
FokI	GGATG	5 cut(s)	14, 19, 412, 1274, 1397
FriOI	GRGCYC	1 cut(s)	450
Fsp4HI	GCNGC	1 cut(s)	1404
FspBI	CTAG	5 cut(s)	20, 558, 570, 1211, 1223
GlaI	GCGC	1 cut(s)	1065
GluI	GCNGC	1 cut(s)	1404
GsaI	CCCAGC	2 cut(s)	984, 1041
GsuI	CTGGAG	2 cut(s)	689, 1157
HaeII	RGCGCY	1 cut(s)	1067
HaeIII	GGCC	3 cut(s)	48, 617, 1174
HapII	CCGG	6 cut(s)	345, 594, 716, 725, 1091, 1160
HhaI	GCGC	1 cut(s)	1066
Hin1I	GRCGYC	1 cut(s)	1064
Hin1II	CATG	5 cut(s)	364, 418, 442, 454, 920
Hin6I	GCGC	1 cut(s)	1064
HinP1I	GCGC	1 cut(s)	1064
HindIII	AAGCTT	2 cut(s)	871, 1374
HpaII	CCGG	6 cut(s)	345, 594, 716, 725, 1091, 1160
HphI	GGTGA	3 cut(s)	103, 901, 1357
Hpy99I	CGWCG	2 cut(s)	386, 838
HpyAV	CCTTC	6 cut(s)	181, 470, 587, 692, 1010, 1252
HpyCH4III	ACNGT	3 cut(s)	64, 115, 1118
HpyCH4IV	ACGT	6 cut(s)	162, 291, 384, 744, 946, 1169
HpyCH4V	TGCA	5 cut(s)	495, 908, 920, 1202, 1283
HpyF10VI	GCNNNNNNNGC	7 cut(s)	147, 673, 790, 922, 1082, 1091, 1318
HpyF3I	CTNAG	2 cut(s)	692, 1081
HpySE526I	ACGT	6 cut(s)	162, 291, 384, 744, 946, 1169
Hsp92I	GRCGYC	1 cut(s)	1064
Hsp92II	CATG	5 cut(s)	364, 418, 442, 454, 920
HspAI	GCGC	1 cut(s)	1064
KasI	GGCGCC	1 cut(s)	1063
KflI	GGGWCCC	1 cut(s)	731
Ksp22I	TGATCA	4 cut(s)	97, 478, 823, 1423
Kzo9I	GATC	8 cut(s)	97, 198, 378, 478, 823, 994, 1027, 1423
LguI	GCTCTTC	1 cut(s)	743
LmnI	GCTCC	5 cut(s)	84, 714, 913, 1309, 1318
Lsp1109I	GCAGC	1 cut(s)	1390
LweI	GCATC	1 cut(s)	145
MabI	ACCWGGT	1 cut(s)	885
MaeI	CTAG	5 cut(s)	20, 558, 570, 1211, 1223
MaeII	ACGT	6 cut(s)	162, 291, 384, 744, 946, 1169
MaeIII	GTNAC	4 cut(s)	536, 1008, 1213, 1276
MalI	GATC	8 cut(s)	99, 200, 380, 480, 825, 996, 1029, 1425
MboI	GATC	8 cut(s)	97, 198, 378, 478, 823, 994, 1027, 1423
MboII	GAAGA	6 cut(s)	97, 174, 760, 893, 1300, 1351
MhlI	GDGCHC	1 cut(s)	450
MlsI	TGGCCA	2 cut(s)	48, 617
MluCI	AATT	5 cut(s)	395, 1126, 1239, 1415, 1428
MluNI	TGGCCA	2 cut(s)	48, 617
Mly113I	GGCGCC	1 cut(s)	1064
MlyI	GAGTC	6 cut(s)	173, 176, 329, 333, 537, 680
MmeI	TCCRAC	3 cut(s)	567, 1024, 1078
Mox20I	TGGCCA	2 cut(s)	48, 617
Mph1103I	ATGCAT	1 cut(s)	1204
MroXI	GAANNNNTTC	1 cut(s)	1020
MscI	TGGCCA	2 cut(s)	48, 617
MseI	TTAA	4 cut(s)	126, 294, 1379, 1432
MslI	CAYNNNNRTG	2 cut(s)	359, 1004
Msp20I	TGGCCA	2 cut(s)	48, 617
MspI	CCGG	6 cut(s)	345, 594, 716, 725, 1091, 1160
MspR9I	CCNGG	4 cut(s)	39, 346, 887, 1091
Mva1269I	GAATGC	1 cut(s)	981
MvaI	CCWGG	2 cut(s)	39, 887
MwoI	GCNNNNNNNGC	7 cut(s)	147, 673, 790, 922, 1082, 1091, 1318
NarI	GGCGCC	1 cut(s)	1064
NciI	CCSGG	2 cut(s)	346, 1091
NdeI	CATATG	1 cut(s)	1399
NdeII	GATC	8 cut(s)	97, 198, 378, 478, 823, 994, 1027, 1423
NlaIII	CATG	5 cut(s)	364, 418, 442, 454, 920
NlaIV	GGNNCC	8 cut(s)	151, 405, 605, 732, 733, 941, 1065, 1393
NmuCI	GTSAC	1 cut(s)	1276
NsiI	ATGCAT	1 cut(s)	1204
NspI	RCATGY	3 cut(s)	364, 418, 920
NspV	TTCGAA	1 cut(s)	779
OliI	CACNNNNGTG	1 cut(s)	1004
PaeI	GCATGC	1 cut(s)	920
PaeR7I	CTCGAG	1 cut(s)	90
PciI	ACATGT	2 cut(s)	360, 414
PciSI	GCTCTTC	1 cut(s)	743
PcsI	WCGNNNNNNNCGW	4 cut(s)	390, 750, 785, 1104
PctI	GAATGC	1 cut(s)	981
PdmI	GAANNNNTTC	1 cut(s)	1020
PfeI	GAWTC	4 cut(s)	334, 561, 776, 1291
PflMI	CCANNNNNTGG	2 cut(s)	44, 55
PkrI	GCNGC	1 cut(s)	1405
PleI	GAGTC	6 cut(s)	173, 175, 328, 333, 536, 679
PluTI	GGCGCC	1 cut(s)	1067
PmaCI	CACGTG	1 cut(s)	1170
PmlI	CACGTG	1 cut(s)	1170
PpsI	GAGTC	6 cut(s)	173, 175, 328, 333, 536, 679
Ppu21I	YACGTR	1 cut(s)	1170
PpuMI	RGGWCCY	3 cut(s)	603, 731, 1392
PscI	ACATGT	2 cut(s)	360, 414
Psp1406I	AACGTT	1 cut(s)	291
Psp5II	RGGWCCY	3 cut(s)	603, 731, 1392
Psp6I	CCWGG	2 cut(s)	37, 885
PspCI	CACGTG	1 cut(s)	1170
PspFI	CCCAGC	2 cut(s)	980, 1037
PspGI	CCWGG	2 cut(s)	37, 885
PspN4I	GGNNCC	8 cut(s)	151, 405, 605, 732, 733, 941, 1065, 1393
PspPI	GGNCC	6 cut(s)	603, 731, 939, 1173, 1265, 1392
PspPPI	RGGWCCY	3 cut(s)	603, 731, 1392
PstI	CTGCAG	1 cut(s)	1285
RsaI	GTAC	1 cut(s)	370
RsaNI	GTAC	1 cut(s)	369
RseI	CAYNNNNRTG	2 cut(s)	359, 1004
SapI	GCTCTTC	1 cut(s)	743
SaqAI	TTAA	4 cut(s)	126, 294, 1379, 1432
SatI	GCNGC	1 cut(s)	1404
Sau3AI	GATC	8 cut(s)	97, 198, 378, 478, 823, 994, 1027, 1423
Sau96I	GGNCC	6 cut(s)	603, 731, 939, 1173, 1265, 1392
SchI	GAGTC	6 cut(s)	173, 176, 329, 333, 537, 680
ScrFI	CCNGG	4 cut(s)	39, 346, 887, 1091
SduI	GDGCHC	1 cut(s)	450
SexAI	ACCWGGT	1 cut(s)	885
SfaNI	GCATC	1 cut(s)	145
SfcI	CTRYAG	2 cut(s)	840, 1281
SfoI	GGCGCC	1 cut(s)	1065
Sfr274I	CTCGAG	1 cut(s)	90
SfuI	TTCGAA	1 cut(s)	779
SinI	GGWCC	5 cut(s)	603, 731, 939, 1265, 1392
SlaI	CTCGAG	1 cut(s)	90
SmiMI	CAYNNNNRTG	2 cut(s)	359, 1004
SmlI	CTYRAG	1 cut(s)	90
SmoI	CTYRAG	1 cut(s)	90
SphI	GCATGC	1 cut(s)	920
Sse9I	AATT	5 cut(s)	395, 1126, 1239, 1415, 1428
SsiI	CCGC	2 cut(s)	432, 728
SspDI	GGCGCC	1 cut(s)	1063
SspI	AATATT	1 cut(s)	229
SspMI	CTAG	5 cut(s)	20, 558, 570, 1211, 1223
StyD4I	CCNGG	4 cut(s)	37, 344, 885, 1089
TaaI	ACNGT	3 cut(s)	64, 115, 1118
TaiI	ACGT	6 cut(s)	165, 294, 387, 747, 949, 1172
TasI	AATT	5 cut(s)	395, 1126, 1239, 1415, 1428
TfiI	GAWTC	4 cut(s)	334, 561, 776, 1291
Tru1I	TTAA	4 cut(s)	126, 294, 1379, 1432
Tru9I	TTAA	4 cut(s)	126, 294, 1379, 1432
TscAI	CASTG	2 cut(s)	883, 1121
TseFI	GTSAC	1 cut(s)	1276
TseI	GCWGC	1 cut(s)	1403
Tsp45I	GTSAC	1 cut(s)	1276
TspDTI	ATGAA	5 cut(s)	16, 17, 97, 196, 259
TspGWI	ACGGA	3 cut(s)	822, 1232, 1322
TspRI	CASTG	2 cut(s)	883, 1121
Van91I	CCANNNNNTGG	2 cut(s)	44, 55
VpaK11BI	GGWCC	5 cut(s)	603, 731, 939, 1265, 1392
XapI	RAATTY	2 cut(s)	1126, 1428
XceI	RCATGY	3 cut(s)	364, 418, 920
XhoI	CTCGAG	1 cut(s)	90
XmnI	GAANNNNTTC	1 cut(s)	1020
XspI	CTAG	5 cut(s)	20, 558, 570, 1211, 1223
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.