Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Reverse (-)

4580589 .. 4582306

Gene Structure 1718 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g06200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGACCTCTTTGTCATATATAACCAATGCCAGCAAAGGCATGAGATCATCACCTCCATCATTTACATCTATACTGCGTGTGTATATAGTATATACATACACAGACACACATCTAAGTAAAAGAAGCTTGTACATCGATCAGCTACTCAAATTTTCATTTCCTCCAGGCTATCAAACTCCAAATAAATTTCCAAATGAAGCAACCAACGAAACTCGTCTTCATCCCCTCTGCCGGCACCGGCCACCTCATCTCCGCCGTGGAGATGGCAAAGCTCCTTGTCTCTCGAGACGAGAAACTCTTCATCACAGTCCTCATCATGAAGCTCCCCTTCGAATCCAAGGGTACAGAGGCCTACATATCCTCCCTCGAATCCTCTCCCGTGTTGTCACGTGTCAACTTCATCACCCTCCCACAGGCCGCCTCCGACATCGACACGCGCAAAAGTCTCAACGCCTTCCGCAACCAATTCGTCGAGAGCCACAAACCCTACGTCAAAGATGCTGTCTCCAAACTCGCCGAGTCAGATTCGGAGTTCCTACGTACATGTTCTTCACTTCGCCGGCCGGGTTTCTCGGGCTGATGCTTAATATCCAAACGATTCGCGACGTGTATGGCAAGGACGTAAGCGAGTTCAAGGACTCGGATGCTGAGTTGACACTGCCGACTTTTGTCAACTCGGTTCCGGCTAGAGTTTTGCCAAGCGTCCTTTTGAACAAGGATGGTGCGAAAGCTTTCCTTGGCTATGCCAACAGGTTTAGAGAACTCAAGGGCATTCTGATAAATACGTTCGTTGAGTTGGAATCACACGCCCTTGATTCACTTTCTGATGGTAAGACCCCACCTGTGTACCCCGTGGGACCTATTCTGAACCTAAAGAGCAGTGAAACCGAAGTGGGTTCGAAGCAGGCTCAGCAGAAGTCGGATATATTAGAATGGCTAGATGACAAGCCCGATTCATCTGTGGTGTTCCTGTGCTTTGGGAGCATGGGAAGCTTTGATGAGGACCAGGTGAGGGAGATAGCTTGGGGGCTGGAGCAAAGCGGGCATCACTTCTTGTGGTCGCTGCGTCAGCCCCCACCAAAGGGGATTATCGCTTCCCCTAGTGACTATTCGGATCCTACGGCAGTCCTACCTGAAGGATTCCTCGATCGGACAGCTGGGATTGGGAAGGTCATAGGTTGGGCTCCGCAAGTGGCGATCCTAGCCCACCCGGCCGTCGGAGGGTTCGTGTCCCATTGCGGGTGGAATTCCACGTTGGAGAGCCTATGGTTTGGCATGCCGGTCGCCGCTTGGCCGGTGTACGCGGAGCAACAACTAAATGCATTTGAGTTGGTGAGGGAATTAGGATTGGCCGTGGAAGTTAATATGGAGTATAGGAGGGACTGGTACGGTGAGTACCCAAATGTTGTGAAGGCACATGAACTAGAGCGAGGGATAAAAGAGTTGATGGAGAAGGATAGTGATGTGAGGAAGAGGGTGAAGGACATGAGTGAGAAAAGCAAGAAAGCCTTGATGGTTGGTGGCTCCTCTTACAATTCATTGGGACGTTTTCTTGATCAAATTTCCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

524

Amino Acids

59.08

Weight (kDa)

9.25

Isoelectric Point (pI)

51.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	10
AccB1I	GGYRCC	1 cut(s)	234
AccII	CGCG	3 cut(s)	437, 603, 1304
AciI	CCGC	8 cut(s)	253, 418, 458, 1041, 1187, 1239, 1287, 1304
AclWI	GGATC	3 cut(s)	1109, 1122, 1192
AcoI	YGGCCR	5 cut(s)	239, 561, 1212, 1292, 1350
AcsI	RAATTY	4 cut(s)	149, 185, 1246, 1560
AcuI	CTGAAG	1 cut(s)	1155
AcvI	CACGTG	1 cut(s)	390
AfaI	GTAC	7 cut(s)	131, 344, 542, 848, 1301, 1388, 1397
AfiI	CCNNNNNNNGG	8 cut(s)	231, 413, 1012, 1081, 1082, 1217, 1221, 1239
AflIII	ACRYGT	3 cut(s)	389, 543, 606
AgsI	TTSAA	2 cut(s)	634, 712
AjiI	CACGTC	1 cut(s)	607
AjnI	CCWGG	2 cut(s)	163, 1005
AjuI	GAANNNNNNNTTGG	2 cut(s)	1238, 1270
AluBI	AGCT	8 cut(s)	126, 142, 272, 323, 731, 993, 1022, 1157
AluI	AGCT	8 cut(s)	126, 142, 272, 323, 731, 993, 1022, 1157
Alw26I	GTCTC	4 cut(s)	280, 284, 450, 509
AlwI	GGATC	3 cut(s)	1109, 1122, 1192
Ama87I	CYCGRG	2 cut(s)	283, 572
AoxI	GGCC	7 cut(s)	239, 349, 415, 561, 1212, 1292, 1350
ApeKI	GCWGC	1 cut(s)	1063
ApoI	RAATTY	4 cut(s)	149, 185, 1246, 1560
ArsI	GACNNNNNNTTYG	4 cut(s)	475, 487, 507, 519
Asp700I	GAANNNNTTC	2 cut(s)	297, 731
AspLEI	GCGC	1 cut(s)	439
AspS9I	GGNCC	2 cut(s)	857, 1003
AsuC2I	CCSGG	2 cut(s)	565, 1211
AsuHPI	GGTGA	6 cut(s)	42, 395, 1021, 1345, 1403, 1489
AsuII	TTCGAA	2 cut(s)	331, 899
AvaI	CYCGRG	2 cut(s)	283, 572
AvaII	GGWCC	2 cut(s)	857, 1003
BaeI	ACNNNNGTAYC	2 cut(s)	830, 863
BamHI	GGATCC	1 cut(s)	1114
BanI	GGYRCC	1 cut(s)	234
BanII	GRGCYC	1 cut(s)	1186
BarI	GAAGNNNNNNTAC	2 cut(s)	533, 565
BbrPI	CACGTG	1 cut(s)	390
BbsI	GAAGAC	1 cut(s)	209
BbvI	GCAGC	1 cut(s)	1050
BccI	CCATC	6 cut(s)	64, 257, 713, 821, 1441, 1507
BceAI	ACGGC	4 cut(s)	240, 1137, 1199, 1337
BcgI	CGANNNNNNTGC	4 cut(s)	449, 483, 1264, 1298
BciT130I	CCWGG	2 cut(s)	165, 1007
BclI	TGATCA	1 cut(s)	1555
BcnI	CCSGG	2 cut(s)	565, 1211
BcoDI	GTCTC	4 cut(s)	280, 284, 450, 509
BfaI	CTAG	5 cut(s)	687, 938, 1101, 1202, 1424
BglI	GCCNNNNNGGC	1 cut(s)	1211
BisI	GCNGC	3 cut(s)	418, 1064, 1287
BlpI	GCTNAGC	1 cut(s)	909
BlsI	GCNGC	3 cut(s)	419, 1065, 1288
Bme1390I	CCNGG	4 cut(s)	165, 565, 1007, 1211
Bme18I	GGWCC	2 cut(s)	857, 1003
BmeT110I	CYCGRG	2 cut(s)	283, 572
BmgBI	CACGTC	1 cut(s)	607
BmgT120I	GGNCC	2 cut(s)	857, 1003
BmiI	GGNNCC	6 cut(s)	236, 681, 858, 1116, 1185, 1525
BmrFI	CCNGG	4 cut(s)	165, 565, 1007, 1211
BmsI	GCATC	4 cut(s)	488, 570, 634, 1054
BoxI	GACNNNNGTC	1 cut(s)	668
BpiI	GAAGAC	1 cut(s)	209
BpmI	CTGGAG	2 cut(s)	147, 1052
Bpu1102I	GCTNAGC	1 cut(s)	909
Bpu14I	TTCGAA	2 cut(s)	331, 899
BpuEI	CTTGAG	1 cut(s)	749
BpuMI	CCSGG	2 cut(s)	565, 1211
Bsa29I	ATCGAT	1 cut(s)	135
BsaAI	YACGTR	2 cut(s)	390, 540
BsaJI	CCNNGG	5 cut(s)	256, 337, 736, 852, 1353
BsaXI	ACNNNNNCTCC	6 cut(s)	234, 264, 345, 375, 1212, 1242
Bsc4I	CCNNNNNNNGG	8 cut(s)	231, 413, 1012, 1081, 1082, 1217, 1221, 1239
Bse118I	RCCGGY	5 cut(s)	231, 237, 559, 1279, 1294
Bse1I	ACTGG	1 cut(s)	1388
Bse3DI	GCAATG	1 cut(s)	1234
BseBI	CCWGG	2 cut(s)	165, 1007
BseCI	ATCGAT	1 cut(s)	135
BseDI	CCNNGG	5 cut(s)	256, 337, 736, 852, 1353
BseGI	GGATG	3 cut(s)	220, 649, 724
BseLI	CCNNNNNNNGG	8 cut(s)	231, 413, 1012, 1081, 1082, 1217, 1221, 1239
BseMI	GCAATG	1 cut(s)	1234
BseMII	CTCAG	2 cut(s)	639, 923
BseNI	ACTGG	1 cut(s)	1388
BseRI	GAGGAG	1 cut(s)	1516
BseX3I	CGGCCG	2 cut(s)	561, 1212
BseXI	GCAGC	1 cut(s)	1050
BseYI	CCCAGC	1 cut(s)	1157
Bsh1236I	CGCG	3 cut(s)	437, 603, 1304
Bsh1285I	CGRYCG	4 cut(s)	564, 1150, 1215, 1284
BshFI	GGCC	7 cut(s)	241, 351, 417, 563, 1214, 1294, 1352
BshNI	GGYRCC	1 cut(s)	234
BshVI	ATCGAT	1 cut(s)	135
BsiEI	CGRYCG	4 cut(s)	564, 1150, 1215, 1284
BsiHKCI	CYCGRG	2 cut(s)	283, 572
BsiSI	CCGG	8 cut(s)	232, 238, 560, 564, 683, 1211, 1280, 1295
BslFI	GGGAC	4 cut(s)	870, 1216, 1394, 1557
BslI	CCNNNNNNNGG	8 cut(s)	231, 413, 1012, 1081, 1082, 1217, 1221, 1239
BsmAI	GTCTC	4 cut(s)	280, 284, 450, 509
BsmBI	CGTCTC	1 cut(s)	280
BsmFI	GGGAC	4 cut(s)	870, 1216, 1394, 1557
BsmI	GAATGC	1 cut(s)	771
BsnI	GGCC	7 cut(s)	241, 351, 417, 563, 1214, 1294, 1352
BsoBI	CYCGRG	2 cut(s)	283, 572
Bsp119I	TTCGAA	2 cut(s)	331, 899
Bsp1286I	GDGCHC	1 cut(s)	1186
Bsp1407I	TGTACA	1 cut(s)	129
Bsp143I	GATC	6 cut(s)	44, 136, 1114, 1147, 1197, 1555
Bsp1720I	GCTNAGC	1 cut(s)	909
Bsp68I	TCGCGA	1 cut(s)	603
BspACI	CCGC	8 cut(s)	253, 418, 458, 1041, 1187, 1239, 1287, 1304
BspANI	GGCC	7 cut(s)	241, 351, 417, 563, 1214, 1294, 1352
BspCNI	CTCAG	2 cut(s)	640, 922
BspDI	ATCGAT	1 cut(s)	135
BspFNI	CGCG	3 cut(s)	437, 603, 1304
BspHI	TCATGA	1 cut(s)	316
BspLI	GGNNCC	6 cut(s)	236, 681, 858, 1116, 1185, 1525
BspPI	GGATC	3 cut(s)	1109, 1122, 1192
BspT104I	TTCGAA	2 cut(s)	331, 899
BspT107I	GGYRCC	1 cut(s)	234
BsrDI	GCAATG	1 cut(s)	1234
BsrFI	RCCGGY	5 cut(s)	231, 237, 559, 1279, 1294
BsrGI	TGTACA	1 cut(s)	129
BsrI	ACTGG	1 cut(s)	1388
BssAI	RCCGGY	5 cut(s)	231, 237, 559, 1279, 1294
BssECI	CCNNGG	5 cut(s)	256, 337, 736, 852, 1353
BssMI	GATC	6 cut(s)	44, 136, 1114, 1147, 1197, 1555
BssT1I	CCWWGG	2 cut(s)	337, 736
Bst2UI	CCWGG	2 cut(s)	165, 1007
Bst4CI	ACNGT	2 cut(s)	308, 1391
Bst6I	CTCTTC	2 cut(s)	303, 1466
BstAUI	TGTACA	1 cut(s)	129
BstBAI	YACGTR	2 cut(s)	390, 540
BstBI	TTCGAA	2 cut(s)	331, 899
BstC8I	GCNNGC	6 cut(s)	31, 233, 561, 906, 1043, 1277
BstDEI	CTNAG	3 cut(s)	113, 648, 909
BstDSI	CCRYGG	3 cut(s)	256, 852, 1353
BstENI	CCTNNNNNAGG	1 cut(s)	411
BstF5I	GGATG	3 cut(s)	220, 649, 724
BstFNI	CGCG	3 cut(s)	437, 603, 1304
BstHHI	GCGC	1 cut(s)	439
BstKTI	GATC	6 cut(s)	47, 139, 1117, 1150, 1200, 1558
BstMAI	GTCTC	4 cut(s)	280, 284, 450, 509
BstMBI	GATC	6 cut(s)	44, 136, 1114, 1147, 1197, 1555
BstMCI	CGRYCG	4 cut(s)	564, 1150, 1215, 1284
BstMWI	GCNNNNNNNGC	7 cut(s)	910, 981, 990, 1042, 1069, 1202, 1211
BstNI	CCWGG	2 cut(s)	165, 1007
BstNSI	RCATGY	2 cut(s)	547, 1279
BstPAI	GACNNNNGTC	1 cut(s)	668
BstSCI	CCNGG	4 cut(s)	163, 563, 1005, 1209
BstSNI	TACGTA	1 cut(s)	540
BstUI	CGCG	3 cut(s)	437, 603, 1304
BstV1I	GCAGC	1 cut(s)	1050
BstV2I	GAAGAC	1 cut(s)	209
BstX2I	RGATCY	1 cut(s)	1114
BstYI	RGATCY	1 cut(s)	1114
BstZI	CGGCCG	2 cut(s)	561, 1212
Bsu15I	ATCGAT	1 cut(s)	135
BsuRI	GGCC	7 cut(s)	241, 351, 417, 563, 1214, 1294, 1352
BsuTUI	ATCGAT	1 cut(s)	135
BtgI	CCRYGG	3 cut(s)	256, 852, 1353
BtrI	CACGTC	1 cut(s)	607
BtsCI	GGATG	3 cut(s)	220, 649, 724
BtsI	GCAGTG	2 cut(s)	656, 886
BtsIMutI	CAGTG	2 cut(s)	656, 886
BtuMI	TCGCGA	1 cut(s)	603
Cac8I	GCNNGC	6 cut(s)	31, 233, 561, 906, 1043, 1277
CciI	TCATGA	1 cut(s)	316
CfoI	GCGC	1 cut(s)	439
Cfr10I	RCCGGY	5 cut(s)	231, 237, 559, 1279, 1294
Cfr13I	GGNCC	2 cut(s)	857, 1003
ClaI	ATCGAT	1 cut(s)	135
CseI	GACGC	2 cut(s)	691, 1055
CsiI	ACCWGGT	1 cut(s)	1005
Csp6I	GTAC	7 cut(s)	130, 343, 541, 847, 1300, 1387, 1396
CviAII	CATG	7 cut(s)	40, 317, 544, 985, 1276, 1418, 1486
CviQI	GTAC	7 cut(s)	130, 343, 541, 847, 1300, 1387, 1396
DdeI	CTNAG	3 cut(s)	113, 648, 909
DpnI	GATC	6 cut(s)	46, 138, 1116, 1149, 1199, 1557
DpnII	GATC	6 cut(s)	44, 136, 1114, 1147, 1197, 1555
DrdI	GACNNNNNNGTC	1 cut(s)	10
DseDI	GACNNNNNNGTC	1 cut(s)	10
EaeI	YGGCCR	5 cut(s)	239, 561, 1212, 1292, 1350
EagI	CGGCCG	2 cut(s)	561, 1212
Eam1104I	CTCTTC	2 cut(s)	303, 1466
EarI	CTCTTC	2 cut(s)	303, 1466
EciI	GGCGGA	1 cut(s)	242
EclXI	CGGCCG	2 cut(s)	561, 1212
Eco105I	TACGTA	1 cut(s)	540
Eco130I	CCWWGG	2 cut(s)	337, 736
Eco147I	AGGCCT	1 cut(s)	351
Eco24I	GRGCYC	1 cut(s)	1186
Eco47I	GGWCC	2 cut(s)	857, 1003
Eco52I	CGGCCG	2 cut(s)	561, 1212
Eco57I	CTGAAG	1 cut(s)	1155
Eco72I	CACGTG	1 cut(s)	390
Eco88I	CYCGRG	2 cut(s)	283, 572
EcoNI	CCTNNNNNAGG	1 cut(s)	411
EcoO109I	RGGNCCY	1 cut(s)	857
EcoRI	GAATTC	1 cut(s)	1246
EcoRII	CCWGG	2 cut(s)	163, 1005
EcoT14I	CCWWGG	2 cut(s)	337, 736
EcoT22I	ATGCAT	1 cut(s)	1324
EcoT38I	GRGCYC	1 cut(s)	1186
ErhI	CCWWGG	2 cut(s)	337, 736
Esp3I	CGTCTC	1 cut(s)	280
FaeI	CATG	7 cut(s)	43, 320, 547, 988, 1279, 1421, 1489
FalI	AAGNNNNNCTT	6 cut(s)	312, 344, 720, 752, 1493, 1525
FaqI	GGGAC	4 cut(s)	870, 1216, 1394, 1557
FatI	CATG	7 cut(s)	39, 316, 543, 984, 1275, 1417, 1485
FauI	CCCGC	2 cut(s)	1034, 1232
FbaI	TGATCA	1 cut(s)	1555
Fnu4HI	GCNGC	3 cut(s)	418, 1064, 1287
FokI	GGATG	3 cut(s)	207, 656, 731
FriOI	GRGCYC	1 cut(s)	1186
Fsp4HI	GCNGC	3 cut(s)	418, 1064, 1287
FspBI	CTAG	5 cut(s)	687, 938, 1101, 1202, 1424
GlaI	GCGC	1 cut(s)	438
GluI	GCNGC	3 cut(s)	418, 1064, 1287
GsaI	CCCAGC	1 cut(s)	1161
GsuI	CTGGAG	2 cut(s)	147, 1052
HaeIII	GGCC	7 cut(s)	241, 351, 417, 563, 1214, 1294, 1352
HapII	CCGG	8 cut(s)	232, 238, 560, 564, 683, 1211, 1280, 1295
HgaI	GACGC	2 cut(s)	691, 1055
HhaI	GCGC	1 cut(s)	439
Hin1II	CATG	7 cut(s)	43, 320, 547, 988, 1279, 1421, 1489
Hin6I	GCGC	1 cut(s)	437
HinP1I	GCGC	1 cut(s)	437
HincII	GTYRAC	3 cut(s)	395, 654, 673
HindII	GTYRAC	3 cut(s)	395, 654, 673
HindIII	AAGCTT	3 cut(s)	124, 729, 991
HpaII	CCGG	8 cut(s)	232, 238, 560, 564, 683, 1211, 1280, 1295
HphI	GGTGA	6 cut(s)	42, 395, 1021, 1345, 1403, 1489
Hpy166II	GTNNAC	5 cut(s)	395, 654, 673, 847, 1300
Hpy188III	TCNNGA	6 cut(s)	283, 285, 317, 473, 602, 1553
Hpy8I	GTNNAC	5 cut(s)	395, 654, 673, 847, 1300
Hpy99I	CGWCG	3 cut(s)	474, 608, 1220
HpyAV	CCTTC	7 cut(s)	338, 464, 1130, 1162, 1405, 1447, 1474
HpyCH4III	ACNGT	2 cut(s)	308, 1391
HpyCH4IV	ACGT	8 cut(s)	389, 490, 539, 606, 621, 785, 1253, 1546
HpyCH4V	TGCA	1 cut(s)	1322
HpyF10VI	GCNNNNNNNGC	7 cut(s)	910, 981, 990, 1042, 1069, 1202, 1211
HpyF3I	CTNAG	3 cut(s)	113, 648, 909
HpySE526I	ACGT	8 cut(s)	389, 490, 539, 606, 621, 785, 1253, 1546
Hsp92II	CATG	7 cut(s)	43, 320, 547, 988, 1279, 1421, 1489
HspAI	GCGC	1 cut(s)	437
KroI	GCCGGC	2 cut(s)	231, 559
KroNI	GCCGGC	2 cut(s)	233, 561
Ksp22I	TGATCA	1 cut(s)	1555
Kzo9I	GATC	6 cut(s)	44, 136, 1114, 1147, 1197, 1555
LmnI	GCTCC	7 cut(s)	277, 328, 981, 1033, 1189, 1306, 1529
Lsp1109I	GCAGC	1 cut(s)	1050
LweI	GCATC	4 cut(s)	488, 570, 634, 1054
MabI	ACCWGGT	1 cut(s)	1005
MaeI	CTAG	5 cut(s)	687, 938, 1101, 1202, 1424
MaeII	ACGT	8 cut(s)	389, 490, 539, 606, 621, 785, 1253, 1546
MaeIII	GTNAC	2 cut(s)	385, 1103
MalI	GATC	6 cut(s)	46, 138, 1116, 1149, 1199, 1557
MboI	GATC	6 cut(s)	44, 136, 1114, 1147, 1197, 1555
MboII	GAAGA	4 cut(s)	209, 290, 541, 1483
MflI	RGATCY	1 cut(s)	1114
MhlI	GDGCHC	1 cut(s)	1186
MluCI	AATT	7 cut(s)	149, 185, 465, 1246, 1340, 1534, 1560
MlyI	GAGTC	2 cut(s)	528, 632
MmeI	TCCRAC	5 cut(s)	448, 777, 900, 1198, 1236
Mph1103I	ATGCAT	1 cut(s)	1324
MroNI	GCCGGC	2 cut(s)	231, 559
MroXI	GAANNNNTTC	2 cut(s)	297, 731
MseI	TTAA	2 cut(s)	585, 1362
MspA1I	CMGCKG	1 cut(s)	1157
MspI	CCGG	8 cut(s)	232, 238, 560, 564, 683, 1211, 1280, 1295
MspR9I	CCNGG	4 cut(s)	165, 565, 1007, 1211
Mva1269I	GAATGC	1 cut(s)	771
MvaI	CCWGG	2 cut(s)	165, 1007
MvnI	CGCG	3 cut(s)	437, 603, 1304
MwoI	GCNNNNNNNGC	7 cut(s)	910, 981, 990, 1042, 1069, 1202, 1211
NaeI	GCCGGC	2 cut(s)	233, 561
NciI	CCSGG	2 cut(s)	565, 1211
NdeII	GATC	6 cut(s)	44, 136, 1114, 1147, 1197, 1555
NgoMIV	GCCGGC	2 cut(s)	231, 559
NlaIII	CATG	7 cut(s)	43, 320, 547, 988, 1279, 1421, 1489
NlaIV	GGNNCC	6 cut(s)	236, 681, 858, 1116, 1185, 1525
NmeAIII	GCCGAG	1 cut(s)	542
NmuCI	GTSAC	2 cut(s)	385, 1103
NruI	TCGCGA	1 cut(s)	603
NsiI	ATGCAT	1 cut(s)	1324
NspI	RCATGY	2 cut(s)	547, 1279
NspV	TTCGAA	2 cut(s)	331, 899
PaeI	GCATGC	1 cut(s)	1279
PaeR7I	CTCGAG	1 cut(s)	283
PagI	TCATGA	1 cut(s)	316
PceI	AGGCCT	1 cut(s)	351
PciI	ACATGT	1 cut(s)	543
PcsI	WCGNNNNNNNCGW	1 cut(s)	1224
PctI	GAATGC	1 cut(s)	771
PdiI	GCCGGC	2 cut(s)	233, 561
PdmI	GAANNNNTTC	2 cut(s)	297, 731
PfeI	GAWTC	8 cut(s)	333, 369, 525, 598, 800, 815, 953, 1140
PkrI	GCNGC	3 cut(s)	419, 1065, 1288
Ple19I	CGATCG	1 cut(s)	1150
PleI	GAGTC	2 cut(s)	527, 632
PmaCI	CACGTG	1 cut(s)	390
PmlI	CACGTG	1 cut(s)	390
PpsI	GAGTC	2 cut(s)	527, 632
Ppu21I	YACGTR	2 cut(s)	390, 540
PpuMI	RGGWCCY	1 cut(s)	857
PscI	ACATGT	1 cut(s)	543
PshAI	GACNNNNGTC	1 cut(s)	668
Psp5II	RGGWCCY	1 cut(s)	857
Psp6I	CCWGG	2 cut(s)	163, 1005
PspCI	CACGTG	1 cut(s)	390
PspFI	CCCAGC	1 cut(s)	1157
PspGI	CCWGG	2 cut(s)	163, 1005
PspN4I	GGNNCC	6 cut(s)	236, 681, 858, 1116, 1185, 1525
PspPI	GGNCC	2 cut(s)	857, 1003
PspPPI	RGGWCCY	1 cut(s)	857
PsuI	RGATCY	1 cut(s)	1114
PvuI	CGATCG	1 cut(s)	1150
PvuII	CAGCTG	1 cut(s)	1157
RruI	TCGCGA	1 cut(s)	603
RsaI	GTAC	7 cut(s)	131, 344, 542, 848, 1301, 1388, 1397
RsaNI	GTAC	7 cut(s)	130, 343, 541, 847, 1300, 1387, 1396
SaqAI	TTAA	2 cut(s)	585, 1362
SatI	GCNGC	3 cut(s)	418, 1064, 1287
Sau3AI	GATC	6 cut(s)	44, 136, 1114, 1147, 1197, 1555
Sau96I	GGNCC	2 cut(s)	857, 1003
SchI	GAGTC	2 cut(s)	528, 632
ScrFI	CCNGG	4 cut(s)	165, 565, 1007, 1211
SduI	GDGCHC	1 cut(s)	1186
SexAI	ACCWGGT	1 cut(s)	1005
SfaNI	GCATC	4 cut(s)	488, 570, 634, 1054
Sfr274I	CTCGAG	1 cut(s)	283
SfuI	TTCGAA	2 cut(s)	331, 899
SinI	GGWCC	2 cut(s)	857, 1003
SlaI	CTCGAG	1 cut(s)	283
SmlI	CTYRAG	2 cut(s)	283, 764
SmoI	CTYRAG	2 cut(s)	283, 764
SnaBI	TACGTA	1 cut(s)	540
SphI	GCATGC	1 cut(s)	1279
Sse9I	AATT	7 cut(s)	149, 185, 465, 1246, 1340, 1534, 1560
SseBI	AGGCCT	1 cut(s)	351
SsiI	CCGC	8 cut(s)	253, 418, 458, 1041, 1187, 1239, 1287, 1304
SspMI	CTAG	5 cut(s)	687, 938, 1101, 1202, 1424
StuI	AGGCCT	1 cut(s)	351
StyD4I	CCNGG	4 cut(s)	163, 563, 1005, 1209
StyI	CCWWGG	2 cut(s)	337, 736
TaaI	ACNGT	2 cut(s)	308, 1391
TaiI	ACGT	8 cut(s)	392, 493, 542, 609, 624, 788, 1256, 1549
TaqI	TCGA	8 cut(s)	135, 284, 331, 367, 430, 472, 899, 1146
TasI	AATT	7 cut(s)	149, 185, 465, 1246, 1340, 1534, 1560
TatI	WGTACW	1 cut(s)	129
TauI	GCSGC	2 cut(s)	420, 1289
TfiI	GAWTC	8 cut(s)	333, 369, 525, 598, 800, 815, 953, 1140
Tru1I	TTAA	2 cut(s)	585, 1362
Tru9I	TTAA	2 cut(s)	585, 1362
TscAI	CASTG	2 cut(s)	663, 886
TseFI	GTSAC	2 cut(s)	385, 1103
TseI	GCWGC	1 cut(s)	1063
Tsp45I	GTSAC	2 cut(s)	385, 1103
TspDTI	ATGAA	9 cut(s)	144, 209, 210, 290, 333, 389, 945, 1434, 1527
TspRI	CASTG	2 cut(s)	663, 886
VpaK11BI	GGWCC	2 cut(s)	857, 1003
XagI	CCTNNNNNAGG	1 cut(s)	411
XapI	RAATTY	4 cut(s)	149, 185, 1246, 1560
XceI	RCATGY	2 cut(s)	547, 1279
XhoI	CTCGAG	1 cut(s)	283
XmnI	GAANNNNTTC	2 cut(s)	297, 731
XspI	CTAG	5 cut(s)	687, 938, 1101, 1202, 1424
Zsp2I	ATGCAT	1 cut(s)	1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.