Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Reverse (-)

16364986 .. 16366979

Gene Structure 1994 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00095030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGAAGCAATCGGCAGAGCTAGTGTTTATCCCATCCCCAGGCATTGGCCACCTCGTGGCGACGATGGAGGTCGCAAAGCTCCTCCTGTTTCGAGATGATCAGCTCTTCATCACCGTCCTCATCATAAAGTTCCCGTTCAGCTCAGACGGCACTGATGCCTACGTTGAGTCCTTCGCGGACTCTTCTATATCAAATCGGATCAAGTTCATCAACCTCCCACAGCAGAATATGGAGACACAAGGTAATAGCGCCATCAACCTCTTGAACTTCATTGACAATCATCAAACCAGCGTTAAAGATGTTGTCGCCAAACTCATCGAGTCCGAGACGAGACTCACCGGGTTTGTCATCGACATGTTTTGTACCTCTATGATCGACGTAGCCAACGAATTAGGGGTTCCTACCTACATGTTTTTCACGTCCAGCGCCTCCATGCTAGGGGTCATGTTACACCTTCAAGCACTTCGTGATGATCACAACAAGGACTGCATCGAGTTCAAGGAATCGACTGCTGATTTGGTGGTCCCGAGTTACTCCAACCCCTTGCCAGCTGCTAGAGTCTTACCTAGTGTCTTTTTAGAAAAGGAGACCAGCGACAGGTCCCTCAACTTGGGCAAAAGGTGTAGAGATGTGAAGGGTATTTTGATAAATACATTCACAGAGCTGGAGTCGCATGCCCTTCTTTCTCTCAGTTCAGATGGTAAGATCCCTCCGGTGTATCCGGTGGGACCCATACTCAAGGTGAAGAGCGATGACAACAATGACCAAGTTGATTCGAAGCAGTCGAAGCAGAAGTCTGATATCTTGAAATGGCTCGATGATCAACCTCCGTCGTCTGTAGTATTTCTGTGCTTCGGGAGTATGGGAAGCTTCAGTGAAGACCAGGTGAAAGAGATTGCCCGCGCATTGGAGCACGGAGGGTTTCGGTTCTTGTGGTCCTTACGTCAGCCTCCACCAAAGGGAACTATTGGAATGCCCAGCGACTACGCCGATCACACAGGGGTGTTACCTGAAGGGTTTCTTGATCGAACGGCTGGGGTCGGAAAAGTTATAGGGTGGGCGCCGCAAGTTGCTATCTTAGCCCACCCAGCAGTCGGAGGTTTCGTCTCCCACTGTGGGTGGAATTCCACTCTGGAGAGCCTGTGGTTTGGAGTGCCGGTTGCCACGTGGCCCTTGTATGCCGAGCAACAACTAAATGCATTTCAGTTAGTTACGGAACTAGGGATAGCCGTGGAAATTGATATGAGTTATAGGAAGGATGGTCCAGTTGTTGTGACTGCAGAGAAAATTAAGAGTGGAATCAAGGAACTGATGGAGCTTGATAGTGATATAAGGAAGAGGGTGAAACAAATGAGTGATAATAGCAAGAAAGCTTTGATGGATGGGGGTCCTCATATGCTGCGTTGGGACACTTCGTTGATCAAATTTAAAGTCTATGACCGCATTTGGGGAAAAGCTTTGATATTGTCTATGATGATATACTCTATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

496

Amino Acids

55.0

Weight (kDa)

5.56

Isoelectric Point (pI)

42.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	277 - 416	9.7e-23	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1060
AccB7I	CCANNNNNTGG	2 cut(s)	44, 55
AccII	CGCG	2 cut(s)	176, 903
AciI	CCGC	4 cut(s)	176, 901, 1064, 1441
AclWI	GGATC	2 cut(s)	206, 700
AcoI	YGGCCR	1 cut(s)	46
AcsI	RAATTY	2 cut(s)	1123, 1424
AcuI	CTGAAG	2 cut(s)	856, 1032
AcvI	CACGTG	1 cut(s)	1167
AcyI	GRCGYC	1 cut(s)	1061
AdeI	CACNNNGTG	2 cut(s)	55, 467
AfaI	GTAC	1 cut(s)	364
AflIII	ACRYGT	2 cut(s)	354, 408
AgsI	TTSAA	4 cut(s)	265, 458, 499, 808
AjiI	CACGTC	1 cut(s)	420
AjnI	CCWGG	2 cut(s)	37, 882
AleI	CACNNNNGTG	1 cut(s)	1001
Alw21I	GWGCWC	1 cut(s)	915
Alw26I	GTCTC	5 cut(s)	227, 320, 325, 581, 1111
AlwI	GGATC	2 cut(s)	206, 700
Ama87I	CYCGRG	1 cut(s)	526
AoxI	GGCC	2 cut(s)	46, 1169
ApeKI	GCWGC	2 cut(s)	551, 1399
ApoI	RAATTY	2 cut(s)	1123, 1424
ArsI	GACNNNNNNTTYG	6 cut(s)	499, 531, 779, 811, 1416, 1448
Asp700I	GAANNNNTTC	1 cut(s)	1017
AspLEI	GCGC	4 cut(s)	251, 428, 905, 1063
AspS9I	GGNCC	7 cut(s)	523, 600, 728, 936, 1170, 1262, 1388
AsuC2I	CCSGG	1 cut(s)	340
AsuHPI	GGTGA	5 cut(s)	103, 328, 754, 898, 1354
AsuII	TTCGAA	1 cut(s)	776
AvaI	CYCGRG	1 cut(s)	526
AvaII	GGWCC	6 cut(s)	523, 600, 728, 936, 1262, 1388
BalI	TGGCCA	1 cut(s)	48
BanI	GGYRCC	1 cut(s)	1060
BauI	CACGAG	1 cut(s)	53
BbrPI	CACGTG	1 cut(s)	1167
BbsI	GAAGAC	1 cut(s)	885
Bbv12I	GWGCWC	1 cut(s)	915
BbvI	GCAGC	2 cut(s)	538, 1386
BccI	CCATC	8 cut(s)	40, 58, 260, 692, 1253, 1306, 1372, 1376
BceAI	ACGGC	3 cut(s)	163, 1047, 1214
BciT130I	CCWGG	2 cut(s)	39, 884
BciVI	GTATCC	1 cut(s)	729
BclI	TGATCA	4 cut(s)	97, 472, 820, 1419
BcnI	CCSGG	1 cut(s)	340
BcoDI	GTCTC	5 cut(s)	227, 320, 325, 581, 1111
BfaI	CTAG	5 cut(s)	20, 437, 555, 567, 1220
BfmI	CTRYAG	2 cut(s)	837, 1278
BfoI	RGCGCY	3 cut(s)	252, 429, 1064
BfuI	GTATCC	1 cut(s)	729
BisI	GCNGC	3 cut(s)	552, 1064, 1400
BlsI	GCNGC	3 cut(s)	553, 1065, 1401
Bme1390I	CCNGG	3 cut(s)	39, 340, 884
Bme18I	GGWCC	6 cut(s)	523, 600, 728, 936, 1262, 1388
BmeT110I	CYCGRG	1 cut(s)	526
BmgBI	CACGTC	1 cut(s)	420
BmgT120I	GGNCC	7 cut(s)	523, 600, 728, 936, 1170, 1262, 1388
BmiI	GGNNCC	7 cut(s)	399, 525, 602, 729, 730, 1062, 1389
BmrFI	CCNGG	3 cut(s)	39, 340, 884
BmsI	GCATC	2 cut(s)	145, 498
BpiI	GAAGAC	1 cut(s)	885
BpmI	CTGGAG	2 cut(s)	686, 1154
Bpu14I	TTCGAA	1 cut(s)	776
BpuEI	CTTGAG	1 cut(s)	722
BpuMI	CCSGG	1 cut(s)	340
BsaAI	YACGTR	1 cut(s)	1167
BsaHI	GRCGYC	1 cut(s)	1061
BsaI	GGTCTC	1 cut(s)	581
BsaJI	CCNNGG	2 cut(s)	37, 1230
BsaWI	WCCGGW	2 cut(s)	712, 721
BsaXI	ACNNNNNCTCC	6 cut(s)	1089, 1119, 1127, 1143, 1157, 1173
Bse118I	RCCGGY	1 cut(s)	1156
Bse1I	ACTGG	1 cut(s)	1265
BseBI	CCWGG	2 cut(s)	39, 884
BseDI	CCNNGG	2 cut(s)	37, 1230
BseGI	GGATG	3 cut(s)	32, 1264, 1387
BseMII	CTCAG	2 cut(s)	156, 703
BseNI	ACTGG	1 cut(s)	1265
BseRI	GAGGAG	1 cut(s)	71
BseXI	GCAGC	2 cut(s)	538, 1386
BseYI	CCCAGC	3 cut(s)	977, 1034, 1087
Bsh1236I	CGCG	2 cut(s)	176, 903
BshFI	GGCC	2 cut(s)	48, 1171
BshNI	GGYRCC	1 cut(s)	1060
BsiHKAI	GWGCWC	1 cut(s)	915
BsiHKCI	CYCGRG	1 cut(s)	526
BsiSI	CCGG	4 cut(s)	339, 713, 722, 1157
BslFI	GGGAC	4 cut(s)	509, 586, 741, 1421
BsmAI	GTCTC	5 cut(s)	227, 320, 325, 581, 1111
BsmBI	CGTCTC	2 cut(s)	320, 1111
BsmFI	GGGAC	4 cut(s)	509, 586, 741, 1421
BsmI	GAATGC	1 cut(s)	978
BsnI	GGCC	2 cut(s)	48, 1171
Bso31I	GGTCTC	1 cut(s)	581
BsoBI	CYCGRG	1 cut(s)	526
Bsp119I	TTCGAA	1 cut(s)	776
Bsp1286I	GDGCHC	1 cut(s)	915
Bsp143I	GATC	9 cut(s)	97, 198, 372, 472, 705, 820, 991, 1024, 1419
BspACI	CCGC	4 cut(s)	176, 901, 1064, 1441
BspANI	GGCC	2 cut(s)	48, 1171
BspCNI	CTCAG	2 cut(s)	155, 702
BspFNI	CGCG	2 cut(s)	176, 903
BspLI	GGNNCC	7 cut(s)	399, 525, 602, 729, 730, 1062, 1389
BspMAI	CTGCAG	1 cut(s)	1282
BspPI	GGATC	2 cut(s)	206, 700
BspQI	GCTCTTC	2 cut(s)	110, 740
BspT104I	TTCGAA	1 cut(s)	776
BspT107I	GGYRCC	1 cut(s)	1060
BspTNI	GGTCTC	1 cut(s)	581
BsrFI	RCCGGY	1 cut(s)	1156
BsrI	ACTGG	1 cut(s)	1265
BssAI	RCCGGY	1 cut(s)	1156
BssECI	CCNNGG	2 cut(s)	37, 1230
BssMI	GATC	9 cut(s)	97, 198, 372, 472, 705, 820, 991, 1024, 1419
BssNI	GRCGYC	1 cut(s)	1061
BssSI	CACGAG	1 cut(s)	53
Bst2BI	CACGAG	1 cut(s)	53
Bst2UI	CCWGG	2 cut(s)	39, 884
Bst4CI	ACNGT	2 cut(s)	115, 1115
Bst6I	CTCTTC	4 cut(s)	110, 187, 740, 1331
BstACI	GRCGYC	1 cut(s)	1061
BstBAI	YACGTR	1 cut(s)	1167
BstBI	TTCGAA	1 cut(s)	776
BstC8I	GCNNGC	3 cut(s)	549, 675, 901
BstDEI	CTNAG	3 cut(s)	142, 689, 1078
BstDSI	CCRYGG	1 cut(s)	1230
BstF5I	GGATG	3 cut(s)	32, 1264, 1387
BstFNI	CGCG	2 cut(s)	176, 903
BstH2I	RGCGCY	3 cut(s)	252, 429, 1064
BstHHI	GCGC	4 cut(s)	251, 428, 905, 1063
BstKTI	GATC	9 cut(s)	100, 201, 375, 475, 708, 823, 994, 1027, 1422
BstMAI	GTCTC	5 cut(s)	227, 320, 325, 581, 1111
BstMBI	GATC	9 cut(s)	97, 198, 372, 472, 705, 820, 991, 1024, 1419
BstMWI	GCNNNNNNNGC	5 cut(s)	147, 670, 787, 1079, 1088
BstNI	CCWGG	2 cut(s)	39, 884
BstNSI	RCATGY	3 cut(s)	358, 412, 677
BstSCI	CCNGG	3 cut(s)	37, 338, 882
BstSFI	CTRYAG	2 cut(s)	837, 1278
BstUI	CGCG	2 cut(s)	176, 903
BstV1I	GCAGC	2 cut(s)	538, 1386
BstV2I	GAAGAC	1 cut(s)	885
BstX2I	RGATCY	1 cut(s)	705
BstYI	RGATCY	1 cut(s)	705
BsuI	GTATCC	1 cut(s)	729
BsuRI	GGCC	2 cut(s)	48, 1171
BtgI	CCRYGG	1 cut(s)	1230
BtgZI	GCGATG	1 cut(s)	765
BtrI	CACGTC	1 cut(s)	420
BtsCI	GGATG	3 cut(s)	32, 1264, 1387
BtsIMutI	CAGTG	3 cut(s)	150, 880, 1111
Cac8I	GCNNGC	3 cut(s)	549, 675, 901
CfoI	GCGC	4 cut(s)	251, 428, 905, 1063
Cfr10I	RCCGGY	1 cut(s)	1156
Cfr13I	GGNCC	7 cut(s)	523, 600, 728, 936, 1170, 1262, 1388
CsiI	ACCWGGT	1 cut(s)	882
Csp6I	GTAC	1 cut(s)	363
CviAII	CATG	5 cut(s)	355, 409, 433, 445, 674
CviQI	GTAC	1 cut(s)	363
DdeI	CTNAG	3 cut(s)	142, 689, 1078
DinI	GGCGCC	1 cut(s)	1062
DpnI	GATC	9 cut(s)	99, 200, 374, 474, 707, 822, 993, 1026, 1421
DpnII	GATC	9 cut(s)	97, 198, 372, 472, 705, 820, 991, 1024, 1419
DraI	TTTAAA	1 cut(s)	1429
DraIII	CACNNNGTG	2 cut(s)	55, 467
EaeI	YGGCCR	1 cut(s)	46
Eam1104I	CTCTTC	4 cut(s)	110, 187, 740, 1331
EarI	CTCTTC	4 cut(s)	110, 187, 740, 1331
Eco31I	GGTCTC	1 cut(s)	581
Eco32I	GATATC	1 cut(s)	802
Eco47I	GGWCC	6 cut(s)	523, 600, 728, 936, 1262, 1388
Eco57I	CTGAAG	2 cut(s)	856, 1032
Eco72I	CACGTG	1 cut(s)	1167
Eco88I	CYCGRG	1 cut(s)	526
EcoO109I	RGGNCCY	3 cut(s)	600, 728, 1388
EcoRI	GAATTC	1 cut(s)	1123
EcoRII	CCWGG	2 cut(s)	37, 882
EcoRV	GATATC	1 cut(s)	802
EcoT22I	ATGCAT	1 cut(s)	1201
EgeI	GGCGCC	1 cut(s)	1062
EheI	GGCGCC	1 cut(s)	1062
Esp3I	CGTCTC	2 cut(s)	320, 1111
FaeI	CATG	5 cut(s)	358, 412, 436, 448, 677
FalI	AAGNNNNNCTT	2 cut(s)	1005, 1037
FaqI	GGGAC	4 cut(s)	509, 586, 741, 1421
FatI	CATG	5 cut(s)	354, 408, 432, 444, 673
FauI	CCCGC	1 cut(s)	908
FauNDI	CATATG	1 cut(s)	1395
FbaI	TGATCA	4 cut(s)	97, 472, 820, 1419
Fnu4HI	GCNGC	3 cut(s)	552, 1064, 1400
FokI	GGATG	3 cut(s)	19, 1271, 1394
Fsp4HI	GCNGC	3 cut(s)	552, 1064, 1400
FspBI	CTAG	5 cut(s)	20, 437, 555, 567, 1220
GlaI	GCGC	4 cut(s)	250, 427, 904, 1062
GluI	GCNGC	3 cut(s)	552, 1064, 1400
GsaI	CCCAGC	3 cut(s)	981, 1038, 1091
GsuI	CTGGAG	2 cut(s)	686, 1154
HaeII	RGCGCY	3 cut(s)	252, 429, 1064
HaeIII	GGCC	2 cut(s)	48, 1171
HapII	CCGG	4 cut(s)	339, 713, 722, 1157
HhaI	GCGC	4 cut(s)	251, 428, 905, 1063
Hin1I	GRCGYC	1 cut(s)	1061
Hin1II	CATG	5 cut(s)	358, 412, 436, 448, 677
Hin6I	GCGC	4 cut(s)	249, 426, 903, 1061
HinP1I	GCGC	4 cut(s)	249, 426, 903, 1061
HindIII	AAGCTT	3 cut(s)	868, 1371, 1455
HinfI	GANTC	9 cut(s)	167, 179, 320, 333, 503, 558, 668, 773, 1299
HpaII	CCGG	4 cut(s)	339, 713, 722, 1157
HphI	GGTGA	5 cut(s)	103, 328, 754, 898, 1354
Hpy188I	TCNGA	7 cut(s)	145, 198, 325, 697, 799, 1043, 1097
Hpy188III	TCNNGA	8 cut(s)	92, 262, 467, 526, 805, 856, 1022, 1133
Hpy99I	CGWCG	3 cut(s)	64, 380, 835
HpyAV	CCTTC	6 cut(s)	181, 464, 628, 689, 1007, 1249
HpyCH4III	ACNGT	2 cut(s)	115, 1115
HpyCH4IV	ACGT	5 cut(s)	162, 378, 419, 943, 1166
HpyCH4V	TGCA	3 cut(s)	489, 1199, 1280
HpyF10VI	GCNNNNNNNGC	5 cut(s)	147, 670, 787, 1079, 1088
HpyF3I	CTNAG	3 cut(s)	142, 689, 1078
HpySE526I	ACGT	5 cut(s)	162, 378, 419, 943, 1166
Hsp92I	GRCGYC	1 cut(s)	1061
Hsp92II	CATG	5 cut(s)	358, 412, 436, 448, 677
HspAI	GCGC	4 cut(s)	249, 426, 903, 1061
KasI	GGCGCC	1 cut(s)	1060
KflI	GGGWCCC	1 cut(s)	728
Ksp22I	TGATCA	4 cut(s)	97, 472, 820, 1419
Kzo9I	GATC	9 cut(s)	97, 198, 372, 472, 705, 820, 991, 1024, 1419
LguI	GCTCTTC	2 cut(s)	110, 740
LmnI	GCTCC	3 cut(s)	84, 910, 1315
Lsp1109I	GCAGC	2 cut(s)	538, 1386
LweI	GCATC	2 cut(s)	145, 498
MabI	ACCWGGT	1 cut(s)	882
MaeI	CTAG	5 cut(s)	20, 437, 555, 567, 1220
MaeII	ACGT	5 cut(s)	162, 378, 419, 943, 1166
MaeIII	GTNAC	5 cut(s)	447, 530, 1005, 1210, 1273
MalI	GATC	9 cut(s)	99, 200, 374, 474, 707, 822, 993, 1026, 1421
MboI	GATC	9 cut(s)	97, 198, 372, 472, 705, 820, 991, 1024, 1419
MboII	GAAGA	5 cut(s)	97, 174, 757, 890, 1348
MflI	RGATCY	1 cut(s)	705
MhlI	GDGCHC	1 cut(s)	915
MlsI	TGGCCA	1 cut(s)	48
MluCI	AATT	5 cut(s)	389, 1123, 1236, 1287, 1424
MluNI	TGGCCA	1 cut(s)	48
Mly113I	GGCGCC	1 cut(s)	1061
MlyI	GAGTC	6 cut(s)	173, 176, 327, 329, 567, 677
MmeI	TCCRAC	3 cut(s)	561, 1021, 1075
Mox20I	TGGCCA	1 cut(s)	48
Mph1103I	ATGCAT	1 cut(s)	1201
MroXI	GAANNNNTTC	1 cut(s)	1017
MscI	TGGCCA	1 cut(s)	48
MseI	TTAA	3 cut(s)	294, 1290, 1428
MslI	CAYNNNNRTG	2 cut(s)	353, 1001
Msp20I	TGGCCA	1 cut(s)	48
MspA1I	CMGCKG	1 cut(s)	551
MspI	CCGG	4 cut(s)	339, 713, 722, 1157
MspR9I	CCNGG	3 cut(s)	39, 340, 884
Mva1269I	GAATGC	1 cut(s)	978
MvaI	CCWGG	2 cut(s)	39, 884
MvnI	CGCG	2 cut(s)	176, 903
MwoI	GCNNNNNNNGC	5 cut(s)	147, 670, 787, 1079, 1088
NarI	GGCGCC	1 cut(s)	1061
NciI	CCSGG	1 cut(s)	340
NdeI	CATATG	1 cut(s)	1395
NdeII	GATC	9 cut(s)	97, 198, 372, 472, 705, 820, 991, 1024, 1419
NlaIII	CATG	5 cut(s)	358, 412, 436, 448, 677
NlaIV	GGNNCC	7 cut(s)	399, 525, 602, 729, 730, 1062, 1389
NmeAIII	GCCGAG	1 cut(s)	1207
NmuCI	GTSAC	1 cut(s)	1273
NsiI	ATGCAT	1 cut(s)	1201
NspI	RCATGY	3 cut(s)	358, 412, 677
NspV	TTCGAA	1 cut(s)	776
OliI	CACNNNNGTG	1 cut(s)	1001
PaeI	GCATGC	1 cut(s)	677
PciI	ACATGT	2 cut(s)	354, 408
PciSI	GCTCTTC	2 cut(s)	110, 740
PcsI	WCGNNNNNNNCGW	3 cut(s)	384, 782, 1101
PctI	GAATGC	1 cut(s)	978
PdmI	GAANNNNTTC	1 cut(s)	1017
PfeI	GAWTC	3 cut(s)	503, 773, 1299
PflMI	CCANNNNNTGG	2 cut(s)	44, 55
PkrI	GCNGC	3 cut(s)	553, 1065, 1401
PleI	GAGTC	6 cut(s)	173, 175, 327, 328, 566, 676
PluTI	GGCGCC	1 cut(s)	1064
PmaCI	CACGTG	1 cut(s)	1167
PmlI	CACGTG	1 cut(s)	1167
PpsI	GAGTC	6 cut(s)	173, 175, 327, 328, 566, 676
Ppu21I	YACGTR	1 cut(s)	1167
PpuMI	RGGWCCY	3 cut(s)	600, 728, 1388
PscI	ACATGT	2 cut(s)	354, 408
Psp5II	RGGWCCY	3 cut(s)	600, 728, 1388
Psp6I	CCWGG	2 cut(s)	37, 882
PspCI	CACGTG	1 cut(s)	1167
PspFI	CCCAGC	3 cut(s)	977, 1034, 1087
PspGI	CCWGG	2 cut(s)	37, 882
PspN4I	GGNNCC	7 cut(s)	399, 525, 602, 729, 730, 1062, 1389
PspPI	GGNCC	7 cut(s)	523, 600, 728, 936, 1170, 1262, 1388
PspPPI	RGGWCCY	3 cut(s)	600, 728, 1388
PstI	CTGCAG	1 cut(s)	1282
PsuI	RGATCY	1 cut(s)	705
PvuII	CAGCTG	1 cut(s)	551
RsaI	GTAC	1 cut(s)	364
RsaNI	GTAC	1 cut(s)	363
RseI	CAYNNNNRTG	2 cut(s)	353, 1001
SapI	GCTCTTC	2 cut(s)	110, 740
SaqAI	TTAA	3 cut(s)	294, 1290, 1428
SatI	GCNGC	3 cut(s)	552, 1064, 1400
Sau3AI	GATC	9 cut(s)	97, 198, 372, 472, 705, 820, 991, 1024, 1419
Sau96I	GGNCC	7 cut(s)	523, 600, 728, 936, 1170, 1262, 1388
SchI	GAGTC	6 cut(s)	173, 176, 327, 329, 567, 677
ScrFI	CCNGG	3 cut(s)	39, 340, 884
SduI	GDGCHC	1 cut(s)	915
SexAI	ACCWGGT	1 cut(s)	882
SfaNI	GCATC	2 cut(s)	145, 498
SfcI	CTRYAG	2 cut(s)	837, 1278
SfoI	GGCGCC	1 cut(s)	1062
SfuI	TTCGAA	1 cut(s)	776
SinI	GGWCC	6 cut(s)	523, 600, 728, 936, 1262, 1388
SmiMI	CAYNNNNRTG	2 cut(s)	353, 1001
SmlI	CTYRAG	1 cut(s)	737
SmoI	CTYRAG	1 cut(s)	737
SphI	GCATGC	1 cut(s)	677
Sse9I	AATT	5 cut(s)	389, 1123, 1236, 1287, 1424
SsiI	CCGC	4 cut(s)	176, 901, 1064, 1441
SspDI	GGCGCC	1 cut(s)	1060
SspMI	CTAG	5 cut(s)	20, 437, 555, 567, 1220
StyD4I	CCNGG	3 cut(s)	37, 338, 882
TaaI	ACNGT	2 cut(s)	115, 1115
TaiI	ACGT	5 cut(s)	165, 381, 422, 946, 1169
TasI	AATT	5 cut(s)	389, 1123, 1236, 1287, 1424
TauI	GCSGC	1 cut(s)	1066
TfiI	GAWTC	3 cut(s)	503, 773, 1299
Tru1I	TTAA	3 cut(s)	294, 1290, 1428
Tru9I	TTAA	3 cut(s)	294, 1290, 1428
TscAI	CASTG	3 cut(s)	157, 880, 1118
TseFI	GTSAC	1 cut(s)	1273
TseI	GCWGC	2 cut(s)	551, 1399
Tsp45I	GTSAC	1 cut(s)	1273
TspDTI	ATGAA	4 cut(s)	17, 97, 196, 259
TspGWI	ACGGA	3 cut(s)	819, 930, 1229
TspRI	CASTG	3 cut(s)	157, 880, 1118
Van91I	CCANNNNNTGG	2 cut(s)	44, 55
VpaK11BI	GGWCC	6 cut(s)	523, 600, 728, 936, 1262, 1388
XapI	RAATTY	2 cut(s)	1123, 1424
XceI	RCATGY	3 cut(s)	358, 412, 677
XmnI	GAANNNNTTC	1 cut(s)	1017
XspI	CTAG	5 cut(s)	20, 437, 555, 567, 1220
Zsp2I	ATGCAT	1 cut(s)	1201

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.