Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Reverse (-)

11073873 .. 11086223

Gene Structure 12351 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1141800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGAAAGCTTTGTACGTCCTTTCGTGGTTGGGCCAAGGGAAAGCTCCAAGAATTCAAGCTGCAGAGCTAGTGTTCATTCCTGCGATAGGTATTGGCCATCTTGCGTCCTCGTTCGAGATCGCAAAGCTCTTAGTTGCTCGAGACGACCGGCTTTTCATCACAGTACTCACCATGAAGCTGCCCTTGGAGTACAACTTGAAGCTCAAGGGTGCTGACGACGCCGAACGTATCAGATTCATCAACCTCCCGGAGGAAGCCGTAGAGACGAAGGGTATTAAGACCAGCCTCTTCCTGAAGCTATTCGTTGAAAATCACAAACAACACGTCAGAGATGCAGTCGCGAAGCTCACTAGTGAGGCCCTTCAGTCTGATTGCAAGCCCAGGCTAGTCGGGTTTGTCATCGACATGTTCTGCACCACCTTGATAGACGTGGCCAATGAGTTTGGGGTTCCTACCTACGTCTTCTTCACGTCCGGCGCAGGCTTTCTCGGGCTTGTGCTCCACCTCCAAACCCTTCATGACGAGCAGAACAAGGACTGCACTGAGCTGAAGGAATCGGATCCTGATTTGGTTTTGCCATGTCTTGTCAACCCAATGCCTGCTAGAGTCTTGCCTGGCATGTATCTGGACAAGGATAGCGCCACAGAGTTCATCAACCATGCCAGAAGGTTCAGAGAAACCAAGGGGATTTTGGTAAACACCTTCATGGAGCTAGAATCCCACGGCCTCGGAGCTCTTACCGACTGCAAAACCCCGCCGCTGTACCCTGTAGGGCCCATACTGAACTTGAAGAGTGACCCTGAAGGCTCGGAGCTGGCCAAAAAGAAGGAAATTTTGGAGTGGCTTGATGATCAACCTCCTTTGTCGGTGGTGTTCCTGTGCTTTGGGAGCATGGGATGCTTTGGTGGGGACCAAGTGAAGGAGATAGCCGCCGCGCTTGAGCACTGCGGCCTCCGATTCTTGTGGTCCCTACGCCAGCCCCCGCCAAAGGGGGAGCTTCCATTCGCCAGTGATTATGCTGATCCCAGCGGAGTCCTGCCCCAAGGGTTCCTCGACCGCACGGCCGGGACAGGGAAGGTCATAGGATGGGCCCCGCAAGTTGCGGTCTTGGGCCATCCATCGGTGGGTGGGTTCGTGTCCCATTGCGGGTGGAATTCAACCCTAGAGAGTCTCTGGTACGGGGTGCCAGTTGCGGCTTGGCCAATGTACGCGGAGCAGCATTTGAATGCTTTTGAGCTGGTGAGGGAGTTGGTACTGGCGGTGGAGATTAAGATGGATTACAGGAGGGAAGGGGAGGTGGTGGTGAGGGCGGAGGAGATAGAGAGAGGGATAAGGGAGGTGATGGAGGTTGAGAGTGAGCAGAGGAAGAAGGTGCAGGGGATGAGTGAGAAGAGCAGGAGAGCGTTGATGGATGGTGGTTCCTCACACTCATCATTGGGCCGTCTCATTGATCAGATCTTCCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

489

Amino Acids

54.13

Weight (kDa)

5.58

Isoelectric Point (pI)

40.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	289 - 414	3.1e-22	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1183
AccII	CGCG	3 cut(s)	341, 935, 1211
AclWI	GGATC	3 cut(s)	554, 567, 1016
AcoI	YGGCCR	5 cut(s)	94, 432, 816, 1062, 1199
AcsI	RAATTY	3 cut(s)	51, 831, 1153
AcuI	CTGAAG	4 cut(s)	314, 347, 569, 822
AcyI	GRCGYC	1 cut(s)	219
AfaI	GTAC	7 cut(s)	14, 165, 191, 764, 1178, 1208, 1254
AfiI	CCNNNNNNNGG	9 cut(s)	86, 250, 919, 988, 989, 1071, 1120, 1124, 1146
AflIII	ACRYGT	2 cut(s)	322, 405
AgsI	TTSAA	6 cut(s)	56, 199, 308, 790, 1158, 1225
AhlI	ACTAGT	1 cut(s)	350
AjiI	CACGTC	3 cut(s)	325, 430, 471
AjnI	CCWGG	2 cut(s)	380, 613
AjuI	GAANNNNNNNTTGG	4 cut(s)	167, 199, 818, 850
Alw21I	GWGCWC	3 cut(s)	501, 736, 945
Alw26I	GTCTC	4 cut(s)	135, 257, 1175, 1448
AlwI	GGATC	3 cut(s)	554, 567, 1016
Ama87I	CYCGRG	2 cut(s)	138, 488
ApaI	GGGCCC	2 cut(s)	777, 1093
ApeKI	GCWGC	3 cut(s)	59, 178, 1216
ApoI	RAATTY	3 cut(s)	51, 831, 1153
ArsI	GACNNNNNNTTYG	2 cut(s)	309, 341
Asp700I	GAANNNNTTC	1 cut(s)	299
AspLEI	GCGC	3 cut(s)	479, 641, 937
AsuC2I	CCSGG	2 cut(s)	248, 1066
AsuHPI	GGTGA	4 cut(s)	160, 1252, 1315, 1351
AvaI	CYCGRG	2 cut(s)	138, 488
AvaII	GGWCC	2 cut(s)	910, 966
BaeGI	GKGCMC	2 cut(s)	777, 1093
BalI	TGGCCA	4 cut(s)	96, 434, 818, 1201
BamHI	GGATCC	1 cut(s)	559
BanI	GGYRCC	1 cut(s)	1183
BanII	GRGCYC	3 cut(s)	736, 777, 1093
BbsI	GAAGAC	1 cut(s)	454
Bbv12I	GWGCWC	3 cut(s)	501, 736, 945
BbvI	GCAGC	3 cut(s)	46, 165, 1228
BccI	CCATC	8 cut(s)	105, 1080, 1122, 1126, 1267, 1336, 1402, 1406
BceAI	ACGGC	4 cut(s)	242, 739, 1077, 1425
BciT130I	CCWGG	2 cut(s)	382, 615
BclI	TGATCA	2 cut(s)	850, 1450
BcnI	CCSGG	2 cut(s)	248, 1066
BcoDI	GTCTC	4 cut(s)	135, 257, 1175, 1448
BcuI	ACTAGT	1 cut(s)	350
BfaI	CTAG	6 cut(s)	68, 351, 386, 603, 713, 1163
BfmI	CTRYAG	2 cut(s)	60, 768
BfoI	RGCGCY	1 cut(s)	642
BglII	AGATCT	1 cut(s)	1455
BisI	GCNGC	8 cut(s)	60, 179, 758, 930, 933, 949, 1194, 1217
BlsI	GCNGC	8 cut(s)	61, 180, 759, 931, 934, 950, 1195, 1218
BmcAI	AGTACT	1 cut(s)	165
Bme1390I	CCNGG	4 cut(s)	248, 382, 615, 1066
Bme18I	GGWCC	2 cut(s)	910, 966
BmeT110I	CYCGRG	2 cut(s)	138, 488
BmgBI	CACGTC	3 cut(s)	325, 430, 471
BmrFI	CCNGG	4 cut(s)	248, 382, 615, 1066
BmsI	GCATC	2 cut(s)	322, 887
BpiI	GAAGAC	1 cut(s)	454
BpuEI	CTTGAG	2 cut(s)	188, 959
BpuMI	CCSGG	2 cut(s)	248, 1066
BsaHI	GRCGYC	1 cut(s)	219
BsaJI	CCNNGG	7 cut(s)	34, 183, 380, 681, 721, 727, 1042
Bsc4I	CCNNNNNNNGG	9 cut(s)	86, 250, 919, 988, 989, 1071, 1120, 1124, 1146
Bse118I	RCCGGY	1 cut(s)	147
Bse1I	ACTGG	3 cut(s)	1008, 1187, 1260
Bse3DI	GCAATG	1 cut(s)	1141
BseBI	CCWGG	2 cut(s)	382, 615
BseDI	CCNNGG	7 cut(s)	34, 183, 380, 681, 721, 727, 1042
BseGI	GGATG	5 cut(s)	902, 1091, 1114, 1386, 1417
BseLI	CCNNNNNNNGG	9 cut(s)	86, 250, 919, 988, 989, 1071, 1120, 1124, 1146
BseMI	GCAATG	1 cut(s)	1141
BseMII	CTCAG	1 cut(s)	534
BseNI	ACTGG	3 cut(s)	1008, 1187, 1260
BseRI	GAGGAG	1 cut(s)	1328
BseSI	GKGCMC	2 cut(s)	777, 1093
BseX3I	CGGCCG	1 cut(s)	1062
BseXI	GCAGC	3 cut(s)	46, 165, 1228
BseYI	CCCAGC	1 cut(s)	1025
BsgI	GTGCAG	3 cut(s)	397, 523, 1394
Bsh1236I	CGCG	3 cut(s)	341, 935, 1211
Bsh1285I	CGRYCG	3 cut(s)	148, 1057, 1065
BshNI	GGYRCC	1 cut(s)	1183
BsiEI	CGRYCG	3 cut(s)	148, 1057, 1065
BsiHKAI	GWGCWC	3 cut(s)	501, 736, 945
BsiHKCI	CYCGRG	2 cut(s)	138, 488
BsiSI	CCGG	4 cut(s)	148, 248, 474, 1065
BslFI	GGGAC	4 cut(s)	923, 952, 1081, 1123
BslI	CCNNNNNNNGG	9 cut(s)	86, 250, 919, 988, 989, 1071, 1120, 1124, 1146
BsmAI	GTCTC	4 cut(s)	135, 257, 1175, 1448
BsmBI	CGTCTC	3 cut(s)	135, 257, 1448
BsmFI	GGGAC	4 cut(s)	923, 952, 1081, 1123
BsmI	GAATGC	1 cut(s)	1231
BsoBI	CYCGRG	2 cut(s)	138, 488
Bsp120I	GGGCCC	2 cut(s)	773, 1089
Bsp1286I	GDGCHC	5 cut(s)	501, 736, 777, 945, 1093
Bsp143I	GATC	6 cut(s)	117, 559, 850, 1021, 1450, 1455
Bsp68I	TCGCGA	1 cut(s)	341
BspCNI	CTCAG	1 cut(s)	535
BspFNI	CGCG	3 cut(s)	341, 935, 1211
BspHI	TCATGA	1 cut(s)	517
BspMAI	CTGCAG	1 cut(s)	64
BspPI	GGATC	3 cut(s)	554, 567, 1016
BspQI	GCTCTTC	1 cut(s)	1385
BspT107I	GGYRCC	1 cut(s)	1183
BsrDI	GCAATG	1 cut(s)	1141
BsrFI	RCCGGY	1 cut(s)	147
BsrI	ACTGG	3 cut(s)	1008, 1187, 1260
BssAI	RCCGGY	1 cut(s)	147
BssECI	CCNNGG	7 cut(s)	34, 183, 380, 681, 721, 727, 1042
BssMI	GATC	6 cut(s)	117, 559, 850, 1021, 1450, 1455
BssNI	GRCGYC	1 cut(s)	219
BssT1I	CCWWGG	4 cut(s)	34, 183, 681, 1042
Bst2UI	CCWGG	2 cut(s)	382, 615
Bst4CI	ACNGT	1 cut(s)	163
Bst6I	CTCTTC	3 cut(s)	293, 785, 1385
BstACI	GRCGYC	1 cut(s)	219
BstAPI	GCANNNNNTGC	1 cut(s)	897
BstC8I	GCNNGC	5 cut(s)	377, 481, 600, 816, 977
BstDEI	CTNAG	2 cut(s)	130, 543
BstDSI	CCRYGG	1 cut(s)	721
BstENI	CCTNNNNNAGG	2 cut(s)	84, 248
BstF5I	GGATG	5 cut(s)	902, 1091, 1114, 1386, 1417
BstFNI	CGCG	3 cut(s)	341, 935, 1211
BstH2I	RGCGCY	1 cut(s)	642
BstHHI	GCGC	3 cut(s)	479, 641, 937
BstKTI	GATC	6 cut(s)	120, 562, 853, 1024, 1453, 1458
BstMAI	GTCTC	4 cut(s)	135, 257, 1175, 1448
BstMBI	GATC	6 cut(s)	117, 559, 850, 1021, 1450, 1455
BstMCI	CGRYCG	3 cut(s)	148, 1057, 1065
BstMWI	GCNNNNNNNGC	3 cut(s)	218, 888, 897
BstNI	CCWGG	2 cut(s)	382, 615
BstNSI	RCATGY	2 cut(s)	409, 622
BstSCI	CCNGG	4 cut(s)	246, 380, 613, 1064
BstSFI	CTRYAG	2 cut(s)	60, 768
BstSLI	GKGCMC	2 cut(s)	777, 1093
BstUI	CGCG	3 cut(s)	341, 935, 1211
BstV1I	GCAGC	3 cut(s)	46, 165, 1228
BstV2I	GAAGAC	1 cut(s)	454
BstX2I	RGATCY	2 cut(s)	559, 1455
BstYI	RGATCY	2 cut(s)	559, 1455
BstZI	CGGCCG	1 cut(s)	1062
BtgI	CCRYGG	1 cut(s)	721
BtrI	CACGTC	3 cut(s)	325, 430, 471
BtsCI	GGATG	5 cut(s)	902, 1091, 1114, 1386, 1417
BtsI	GCAGTG	1 cut(s)	943
BtsIMutI	CAGTG	3 cut(s)	540, 943, 1015
BtuMI	TCGCGA	1 cut(s)	341
Cac8I	GCNNGC	5 cut(s)	377, 481, 600, 816, 977
CciI	TCATGA	1 cut(s)	517
CfoI	GCGC	3 cut(s)	479, 641, 937
Cfr10I	RCCGGY	1 cut(s)	147
CseI	GACGC	2 cut(s)	93, 227
Csp6I	GTAC	7 cut(s)	13, 164, 190, 763, 1177, 1207, 1253
CviAII	CATG	8 cut(s)	172, 406, 518, 579, 619, 659, 706, 892
CviQI	GTAC	7 cut(s)	13, 164, 190, 763, 1177, 1207, 1253
DdeI	CTNAG	2 cut(s)	130, 543
DpnI	GATC	6 cut(s)	119, 561, 852, 1023, 1452, 1457
DpnII	GATC	6 cut(s)	117, 559, 850, 1021, 1450, 1455
EaeI	YGGCCR	5 cut(s)	94, 432, 816, 1062, 1199
EagI	CGGCCG	1 cut(s)	1062
Eam1104I	CTCTTC	3 cut(s)	293, 785, 1385
EarI	CTCTTC	3 cut(s)	293, 785, 1385
EciI	GGCGGA	1 cut(s)	1325
Ecl136II	GAGCTC	1 cut(s)	734
EclXI	CGGCCG	1 cut(s)	1062
Eco130I	CCWWGG	4 cut(s)	34, 183, 681, 1042
Eco24I	GRGCYC	3 cut(s)	736, 777, 1093
Eco47I	GGWCC	2 cut(s)	910, 966
Eco52I	CGGCCG	1 cut(s)	1062
Eco53kI	GAGCTC	1 cut(s)	734
Eco57I	CTGAAG	4 cut(s)	314, 347, 569, 822
Eco88I	CYCGRG	2 cut(s)	138, 488
EcoICRI	GAGCTC	1 cut(s)	734
EcoNI	CCTNNNNNAGG	2 cut(s)	84, 248
EcoO109I	RGGNCCY	3 cut(s)	358, 773, 1090
EcoRI	GAATTC	2 cut(s)	51, 1153
EcoRII	CCWGG	2 cut(s)	380, 613
EcoT14I	CCWWGG	4 cut(s)	34, 183, 681, 1042
EcoT38I	GRGCYC	3 cut(s)	736, 777, 1093
ErhI	CCWWGG	4 cut(s)	34, 183, 681, 1042
Esp3I	CGTCTC	3 cut(s)	135, 257, 1448
FaeI	CATG	8 cut(s)	175, 409, 521, 582, 622, 662, 709, 895
FalI	AAGNNNNNCTT	2 cut(s)	167, 199
FaqI	GGGAC	4 cut(s)	923, 952, 1081, 1123
FatI	CATG	8 cut(s)	171, 405, 517, 578, 618, 658, 705, 891
FauI	CCCGC	4 cut(s)	762, 990, 1101, 1139
FbaI	TGATCA	2 cut(s)	850, 1450
Fnu4HI	GCNGC	8 cut(s)	60, 179, 758, 930, 933, 949, 1194, 1217
FokI	GGATG	5 cut(s)	909, 1098, 1101, 1393, 1424
FriOI	GRGCYC	3 cut(s)	736, 777, 1093
Fsp4HI	GCNGC	8 cut(s)	60, 179, 758, 930, 933, 949, 1194, 1217
FspBI	CTAG	6 cut(s)	68, 351, 386, 603, 713, 1163
GlaI	GCGC	3 cut(s)	478, 640, 936
GluI	GCNGC	8 cut(s)	60, 179, 758, 930, 933, 949, 1194, 1217
GsaI	CCCAGC	1 cut(s)	1029
HaeII	RGCGCY	1 cut(s)	642
HapII	CCGG	4 cut(s)	148, 248, 474, 1065
HgaI	GACGC	2 cut(s)	93, 227
HhaI	GCGC	3 cut(s)	479, 641, 937
Hin1I	GRCGYC	1 cut(s)	219
Hin1II	CATG	8 cut(s)	175, 409, 521, 582, 622, 662, 709, 895
Hin6I	GCGC	3 cut(s)	477, 639, 935
HinP1I	GCGC	3 cut(s)	477, 639, 935
HincII	GTYRAC	1 cut(s)	589
HindII	GTYRAC	1 cut(s)	589
HindIII	AAGCTT	1 cut(s)	6
HinfI	GANTC	7 cut(s)	234, 554, 606, 716, 957, 1032, 1168
HpaII	CCGG	4 cut(s)	148, 248, 474, 1065
HphI	GGTGA	4 cut(s)	160, 1252, 1315, 1351
Hpy166II	GTNNAC	2 cut(s)	589, 697
Hpy188I	TCNGA	9 cut(s)	233, 329, 370, 559, 674, 731, 811, 956, 1455
Hpy188III	TCNNGA	7 cut(s)	115, 140, 292, 340, 518, 563, 626
Hpy8I	GTNNAC	2 cut(s)	589, 697
Hpy99I	CGWCG	1 cut(s)	221
HpyCH4III	ACNGT	1 cut(s)	163
HpyCH4IV	ACGT	6 cut(s)	15, 226, 324, 429, 459, 470
HpyCH4V	TGCA	7 cut(s)	62, 335, 375, 414, 540, 747, 1375
HpyF10VI	GCNNNNNNNGC	3 cut(s)	218, 888, 897
HpyF3I	CTNAG	2 cut(s)	130, 543
HpySE526I	ACGT	6 cut(s)	15, 226, 324, 429, 459, 470
Hsp92I	GRCGYC	1 cut(s)	219
Hsp92II	CATG	8 cut(s)	175, 409, 521, 582, 622, 662, 709, 895
HspAI	GCGC	3 cut(s)	477, 639, 935
Ksp22I	TGATCA	2 cut(s)	850, 1450
Kzo9I	GATC	6 cut(s)	117, 559, 850, 1021, 1450, 1455
LguI	GCTCTTC	1 cut(s)	1385
LmnI	GCTCC	8 cut(s)	49, 504, 709, 731, 811, 888, 994, 1213
Lsp1109I	GCAGC	3 cut(s)	46, 165, 1228
LweI	GCATC	2 cut(s)	322, 887
MaeI	CTAG	6 cut(s)	68, 351, 386, 603, 713, 1163
MaeII	ACGT	6 cut(s)	15, 226, 324, 429, 459, 470
MaeIII	GTNAC	1 cut(s)	794
MalI	GATC	6 cut(s)	119, 561, 852, 1023, 1452, 1457
MboI	GATC	6 cut(s)	117, 559, 850, 1021, 1450, 1455
MboII	GAAGA	7 cut(s)	280, 454, 457, 802, 1378, 1402, 1450
MflI	RGATCY	2 cut(s)	559, 1455
MhlI	GDGCHC	5 cut(s)	501, 736, 777, 945, 1093
MlsI	TGGCCA	4 cut(s)	96, 434, 818, 1201
MluCI	AATT	3 cut(s)	51, 831, 1153
MluNI	TGGCCA	4 cut(s)	96, 434, 818, 1201
MlyI	GAGTC	3 cut(s)	615, 1041, 1177
Mox20I	TGGCCA	4 cut(s)	96, 434, 818, 1201
MroXI	GAANNNNTTC	1 cut(s)	299
MscI	TGGCCA	4 cut(s)	96, 434, 818, 1201
MseI	TTAA	2 cut(s)	276, 1269
MslI	CAYNNNNRTG	3 cut(s)	404, 704, 1224
Msp20I	TGGCCA	4 cut(s)	96, 434, 818, 1201
MspA1I	CMGCKG	2 cut(s)	760, 1029
MspI	CCGG	4 cut(s)	148, 248, 474, 1065
MspR9I	CCNGG	4 cut(s)	248, 382, 615, 1066
Mva1269I	GAATGC	1 cut(s)	1231
MvaI	CCWGG	2 cut(s)	382, 615
MvnI	CGCG	3 cut(s)	341, 935, 1211
MwoI	GCNNNNNNNGC	3 cut(s)	218, 888, 897
NciI	CCSGG	2 cut(s)	248, 1066
NdeII	GATC	6 cut(s)	117, 559, 850, 1021, 1450, 1455
NlaIII	CATG	8 cut(s)	175, 409, 521, 582, 622, 662, 709, 895
NmuCI	GTSAC	1 cut(s)	794
NruI	TCGCGA	1 cut(s)	341
NspI	RCATGY	2 cut(s)	409, 622
PaeR7I	CTCGAG	1 cut(s)	138
PagI	TCATGA	1 cut(s)	517
PciI	ACATGT	1 cut(s)	405
PciSI	GCTCTTC	1 cut(s)	1385
PctI	GAATGC	1 cut(s)	1231
PdmI	GAANNNNTTC	1 cut(s)	299
PfeI	GAWTC	4 cut(s)	234, 554, 716, 957
PfoI	TCCNGGA	1 cut(s)	246
PkrI	GCNGC	8 cut(s)	61, 180, 759, 931, 934, 950, 1195, 1218
PleI	GAGTC	3 cut(s)	614, 1040, 1176
PpsI	GAGTC	3 cut(s)	614, 1040, 1176
PscI	ACATGT	1 cut(s)	405
Psp124BI	GAGCTC	1 cut(s)	736
Psp6I	CCWGG	2 cut(s)	380, 613
PspFI	CCCAGC	1 cut(s)	1025
PspGI	CCWGG	2 cut(s)	380, 613
PspOMI	GGGCCC	2 cut(s)	773, 1089
PstI	CTGCAG	1 cut(s)	64
PsuI	RGATCY	2 cut(s)	559, 1455
RruI	TCGCGA	1 cut(s)	341
RsaI	GTAC	7 cut(s)	14, 165, 191, 764, 1178, 1208, 1254
RsaNI	GTAC	7 cut(s)	13, 164, 190, 763, 1177, 1207, 1253
RseI	CAYNNNNRTG	3 cut(s)	404, 704, 1224
SacI	GAGCTC	1 cut(s)	736
SapI	GCTCTTC	1 cut(s)	1385
SaqAI	TTAA	2 cut(s)	276, 1269
SatI	GCNGC	8 cut(s)	60, 179, 758, 930, 933, 949, 1194, 1217
Sau3AI	GATC	6 cut(s)	117, 559, 850, 1021, 1450, 1455
ScaI	AGTACT	1 cut(s)	165
SchI	GAGTC	3 cut(s)	615, 1041, 1177
ScrFI	CCNGG	4 cut(s)	248, 382, 615, 1066
SduI	GDGCHC	5 cut(s)	501, 736, 777, 945, 1093
SfaNI	GCATC	2 cut(s)	322, 887
SfcI	CTRYAG	2 cut(s)	60, 768
Sfr274I	CTCGAG	1 cut(s)	138
SinI	GGWCC	2 cut(s)	910, 966
SlaI	CTCGAG	1 cut(s)	138
SmiMI	CAYNNNNRTG	3 cut(s)	404, 704, 1224
SmlI	CTYRAG	3 cut(s)	138, 203, 938
SmoI	CTYRAG	3 cut(s)	138, 203, 938
SpeI	ACTAGT	1 cut(s)	350
Sse9I	AATT	3 cut(s)	51, 831, 1153
SspMI	CTAG	6 cut(s)	68, 351, 386, 603, 713, 1163
SstI	GAGCTC	1 cut(s)	736
StyD4I	CCNGG	4 cut(s)	246, 380, 613, 1064
StyI	CCWWGG	4 cut(s)	34, 183, 681, 1042
TaaI	ACNGT	1 cut(s)	163
TaiI	ACGT	6 cut(s)	18, 229, 327, 432, 462, 473
TaqI	TCGA	4 cut(s)	114, 139, 402, 1053
TasI	AATT	3 cut(s)	51, 831, 1153
TatI	WGTACW	2 cut(s)	163, 189
TauI	GCSGC	5 cut(s)	760, 932, 935, 951, 1196
TfiI	GAWTC	4 cut(s)	234, 554, 716, 957
Tru1I	TTAA	2 cut(s)	276, 1269
Tru9I	TTAA	2 cut(s)	276, 1269
TscAI	CASTG	3 cut(s)	547, 950, 1015
TseFI	GTSAC	1 cut(s)	794
TseI	GCWGC	3 cut(s)	59, 178, 1216
Tsp45I	GTSAC	1 cut(s)	794
TspDTI	ATGAA	8 cut(s)	17, 64, 145, 188, 226, 506, 640, 694
TspRI	CASTG	3 cut(s)	547, 950, 1015
VpaK11BI	GGWCC	2 cut(s)	910, 966
XagI	CCTNNNNNAGG	2 cut(s)	84, 248
XapI	RAATTY	3 cut(s)	51, 831, 1153
XceI	RCATGY	2 cut(s)	409, 622
XcmI	CCANNNNNNNNNTGG	2 cut(s)	688, 1194
XhoI	CTCGAG	1 cut(s)	138
XmnI	GAANNNNTTC	1 cut(s)	299
XspI	CTAG	6 cut(s)	68, 351, 386, 603, 713, 1163
ZrmI	AGTACT	1 cut(s)	165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.