Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

70670491 .. 70671782

Gene Structure 1292 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ52240

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1227 bp

ATGCCCCGCAGCACCTTCAGCAAAACGTTCGTCGAAAGCCACAAACCCTACGTCAGAGATGCCGTCGCCAAACTCGCCGAGTCAGCCGATCAGTTGACCCCTAGGCTCGCCGGGTTCGTCGTCGACATGGTTTGCGCCACTATGATCGACGTGGCCAACGAGTTCGGGGTTCCAACGTACATCTTCTTCACCTCCAACGCTTGCTTTCTAGGGCTCGTGTTCCACCTCCAGACGCTAGCCGACGAGCATGACGTGGACGTCACCGAGTTAAAGGACTCGGAGGCCGAATTGTTCGTCCCGAGTTTCGTGAATCCGGTCCCCACTAAAGCCCTGCCAAGAACACTTATGGAAAGAGAGGGGGCAGCGTTGTTTGCAAACTTAACGAGAAGGTTCAGAGAGGCCAAGGGTATTTTGGTAAATACATTCTGGGAGCTTGAATCTCATGCACTTCGTACTCTTAGTTCTTATGGTGAGACCCCTCCGGTGTATCCGGTGGGACCCATACTGAAGTTGAAGAGTGAAGATGAAGTCCACGTGGACCCAGAACAGGCCGGCAAAAAAAAGTCGGATATATTGAAATGGCTTGATGATCAACTTCCGTCTTCAGTAGTGTTCTTGTGCTTTGGGAGCAGGGGGAGTTTCGGTGAGGACCAGGTGAAAGAGATGGCATGTGCGCTGGAGCAGAGTGGGCACCGATTCTTGTGGTCTCTACGTCGGCCCCCACCAAAGGGCAAGATTACTCACCCCAGTGACTATGCCGATCCTACAGCTGTCTTACCTGATGAATTTATCAGACGGACGGCTGAGATCGGGAAGGTCATAGGATGGGCCCCACAAGTAGACGTGTTGGCCCATCCGGCCATTGGGGGTTTTGTATCTCATTGTTGGTGGAATTCCATTCTCGAGAGTTTATGGTTTGGGGTGCCAATCGCCACGTGGCCTATGTACGCAGAACAACAAATGAATGCATTTGAAATGGTGAGAGAATGGGGATTGGCCGTGAAAATCAGTGTGGAGTATGGCAGTGTGTTTCATAGTACTGCCGAAGAGAGGCAACTGGTTTTGATTGCACAAGATATAGAGAGAGGAATAAGGGAGGTGATGGAGCCTGATAGTACTGTAAGGAAGAGAGTGAAAGAGATGAGTGAAATAAGTAAGAGAGCGTTGATGGATGGTGGTTCTTCCTCCTCTTCATTGGGACGTTTTATTGATGAGATATTTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

408

Amino Acids

45.74

Weight (kDa)

5.35

Isoelectric Point (pI)

46.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	202 - 336	1e-22	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	257
AatII	GACGTC	1 cut(s)	261
AccB1I	GGYRCC	2 cut(s)	690, 922
AccI	GTMKAC	2 cut(s)	123, 840
AciI	CCGC	1 cut(s)	7
AclI	AACGTT	1 cut(s)	26
AclWI	GGATC	1 cut(s)	755
AcoI	YGGCCR	3 cut(s)	153, 858, 996
AcsI	RAATTY	2 cut(s)	785, 892
AcuI	CTGAAG	2 cut(s)	527, 588
AcvI	CACGTG	2 cut(s)	535, 936
AcyI	GRCGYC	1 cut(s)	258
AfaI	GTAC	5 cut(s)	179, 454, 947, 1039, 1117
AfiI	CCNNNNNNNGG	5 cut(s)	547, 727, 728, 863, 1050
AflIII	ACRYGT	1 cut(s)	843
AgsI	TTSAA	4 cut(s)	437, 514, 577, 974
AjiI	CACGTC	3 cut(s)	151, 253, 844
AjnI	CCWGG	1 cut(s)	651
AleI	CACNNNNGTG	1 cut(s)	747
AluBI	AGCT	2 cut(s)	433, 770
AluI	AGCT	2 cut(s)	433, 770
Alw26I	GTCTC	2 cut(s)	467, 711
AlwI	GGATC	1 cut(s)	755
Ama87I	CYCGRG	2 cut(s)	298, 902
ApaI	GGGCCC	1 cut(s)	832
ApeKI	GCWGC	2 cut(s)	9, 362
ApoI	RAATTY	2 cut(s)	785, 892
ArsI	GACNNNNNNTTYG	6 cut(s)	15, 36, 47, 68, 279, 311
AspA2I	CCTAGG	1 cut(s)	101
AspLEI	GCGC	2 cut(s)	137, 676
AspS9I	GGNCC	8 cut(s)	316, 497, 538, 649, 717, 828, 829, 850
AsuC2I	CCSGG	1 cut(s)	112
AsuHPI	GGTGA	8 cut(s)	181, 253, 482, 656, 667, 734, 991, 1111
AsuNHI	GCTAGC	1 cut(s)	235
AvaI	CYCGRG	2 cut(s)	298, 902
AvaII	GGWCC	4 cut(s)	316, 497, 538, 649
AvrII	CCTAGG	1 cut(s)	101
BaeGI	GKGCMC	2 cut(s)	693, 832
BalI	TGGCCA	1 cut(s)	155
BanI	GGYRCC	2 cut(s)	690, 922
BanII	GRGCYC	2 cut(s)	216, 832
BarI	GAAGNNNNNNTAC	2 cut(s)	170, 202
BauI	CACGAG	1 cut(s)	215
BbrPI	CACGTG	2 cut(s)	535, 936
BbsI	GAAGAC	1 cut(s)	594
BbvI	GCAGC	2 cut(s)	21, 374
BccI	CCATC	6 cut(s)	658, 819, 861, 1096, 1162, 1166
BceAI	ACGGC	3 cut(s)	47, 816, 983
BcgI	CGANNNNNNTGC	2 cut(s)	10, 44
BciT130I	CCWGG	1 cut(s)	653
BciVI	GTATCC	1 cut(s)	498
BclI	TGATCA	1 cut(s)	589
BcnI	CCSGG	1 cut(s)	112
BcoDI	GTCTC	2 cut(s)	467, 711
BfaI	CTAG	3 cut(s)	102, 209, 236
BfmI	CTRYAG	1 cut(s)	765
BfuI	GTATCC	1 cut(s)	498
BglI	GCCNNNNNGGC	1 cut(s)	857
BisI	GCNGC	2 cut(s)	10, 363
BlnI	CCTAGG	1 cut(s)	101
BlsI	GCNGC	2 cut(s)	11, 364
BmcAI	AGTACT	2 cut(s)	1039, 1117
Bme1390I	CCNGG	2 cut(s)	112, 653
Bme18I	GGWCC	4 cut(s)	316, 497, 538, 649
BmeT110I	CYCGRG	2 cut(s)	298, 902
BmgBI	CACGTC	3 cut(s)	151, 253, 844
BmgT120I	GGNCC	8 cut(s)	316, 497, 538, 649, 717, 828, 829, 850
BmrFI	CCNGG	2 cut(s)	112, 653
BmrI	ACTGGG	1 cut(s)	741
BmsI	GCATC	1 cut(s)	49
BmtI	GCTAGC	1 cut(s)	239
BmuI	ACTGGG	1 cut(s)	741
BpiI	GAAGAC	1 cut(s)	594
BpmI	CTGGAG	2 cut(s)	212, 698
BpuMI	CCSGG	1 cut(s)	112
BsaAI	YACGTR	2 cut(s)	535, 936
BsaHI	GRCGYC	1 cut(s)	258
BsaI	GGTCTC	2 cut(s)	467, 711
BsaJI	CCNNGG	2 cut(s)	101, 402
BsaWI	WCCGGW	3 cut(s)	313, 481, 490
BsaXI	ACNNNNNCTCC	2 cut(s)	628, 658
Bsc4I	CCNNNNNNNGG	5 cut(s)	547, 727, 728, 863, 1050
Bse118I	RCCGGY	1 cut(s)	551
Bse1I	ACTGG	2 cut(s)	747, 1062
BseBI	CCWGG	1 cut(s)	653
BseDI	CCNNGG	2 cut(s)	101, 402
BseGI	GGATG	3 cut(s)	830, 853, 1177
BseLI	CCNNNNNNNGG	5 cut(s)	547, 727, 728, 863, 1050
BseMII	CTCAG	1 cut(s)	795
BseNI	ACTGG	2 cut(s)	747, 1062
BseRI	GAGGAG	1 cut(s)	1177
BseSI	GKGCMC	2 cut(s)	693, 832
BseXI	GCAGC	2 cut(s)	21, 374
BshNI	GGYRCC	2 cut(s)	690, 922
BsiHKCI	CYCGRG	2 cut(s)	298, 902
BsiSI	CCGG	6 cut(s)	111, 314, 482, 491, 552, 857
BslFI	GGGAC	4 cut(s)	281, 302, 510, 1212
BslI	CCNNNNNNNGG	5 cut(s)	547, 727, 728, 863, 1050
BsmAI	GTCTC	2 cut(s)	467, 711
BsmFI	GGGAC	4 cut(s)	281, 302, 510, 1212
BsmI	GAATGC	1 cut(s)	970
Bso31I	GGTCTC	2 cut(s)	467, 711
BsoBI	CYCGRG	2 cut(s)	298, 902
Bsp120I	GGGCCC	1 cut(s)	828
Bsp1286I	GDGCHC	3 cut(s)	216, 693, 832
Bsp143I	GATC	5 cut(s)	88, 144, 589, 760, 807
BspACI	CCGC	1 cut(s)	7
BspCNI	CTCAG	1 cut(s)	796
BspOI	GCTAGC	1 cut(s)	239
BspPI	GGATC	1 cut(s)	755
BspT107I	GGYRCC	2 cut(s)	690, 922
BspTNI	GGTCTC	2 cut(s)	467, 711
BsrFI	RCCGGY	1 cut(s)	551
BsrI	ACTGG	2 cut(s)	747, 1062
BssAI	RCCGGY	1 cut(s)	551
BssECI	CCNNGG	2 cut(s)	101, 402
BssMI	GATC	5 cut(s)	88, 144, 589, 760, 807
BssNI	GRCGYC	1 cut(s)	258
BssSI	CACGAG	1 cut(s)	215
BssT1I	CCWWGG	2 cut(s)	101, 402
Bst2BI	CACGAG	1 cut(s)	215
Bst2UI	CCWGG	1 cut(s)	653
Bst4CI	ACNGT	1 cut(s)	1120
Bst6I	CTCTTC	4 cut(s)	509, 1041, 1121, 1195
BstACI	GRCGYC	1 cut(s)	258
BstBAI	YACGTR	2 cut(s)	535, 936
BstC8I	GCNNGC	4 cut(s)	108, 202, 237, 553
BstDEI	CTNAG	2 cut(s)	458, 804
BstF5I	GGATG	3 cut(s)	830, 853, 1177
BstHHI	GCGC	2 cut(s)	137, 676
BstKTI	GATC	5 cut(s)	91, 147, 592, 763, 810
BstMAI	GTCTC	2 cut(s)	467, 711
BstMBI	GATC	5 cut(s)	88, 144, 589, 760, 807
BstMWI	GCNNNNNNNGC	7 cut(s)	18, 74, 83, 371, 627, 688, 857
BstNI	CCWGG	1 cut(s)	653
BstNSI	RCATGY	1 cut(s)	672
BstSCI	CCNGG	2 cut(s)	110, 651
BstSFI	CTRYAG	1 cut(s)	765
BstSLI	GKGCMC	2 cut(s)	693, 832
BstV1I	GCAGC	2 cut(s)	21, 374
BstV2I	GAAGAC	1 cut(s)	594
BsuI	GTATCC	1 cut(s)	498
BtrI	CACGTC	3 cut(s)	151, 253, 844
BtsCI	GGATG	3 cut(s)	830, 853, 1177
BtsI	GCAGTG	1 cut(s)	1030
BtsIMutI	CAGTG	3 cut(s)	754, 1015, 1030
Cac8I	GCNNGC	4 cut(s)	108, 202, 237, 553
CfoI	GCGC	2 cut(s)	137, 676
Cfr10I	RCCGGY	1 cut(s)	551
Cfr13I	GGNCC	8 cut(s)	316, 497, 538, 649, 717, 828, 829, 850
CseI	GACGC	1 cut(s)	241
CsiI	ACCWGGT	1 cut(s)	651
Csp6I	GTAC	5 cut(s)	178, 453, 946, 1038, 1116
CviAII	CATG	4 cut(s)	127, 248, 443, 669
CviQI	GTAC	5 cut(s)	178, 453, 946, 1038, 1116
DdeI	CTNAG	2 cut(s)	458, 804
DpnI	GATC	5 cut(s)	90, 146, 591, 762, 809
DpnII	GATC	5 cut(s)	88, 144, 589, 760, 807
DrdI	GACNNNNNNGTC	1 cut(s)	257
DseDI	GACNNNNNNGTC	1 cut(s)	257
EaeI	YGGCCR	3 cut(s)	153, 858, 996
Eam1104I	CTCTTC	4 cut(s)	509, 1041, 1121, 1195
EarI	CTCTTC	4 cut(s)	509, 1041, 1121, 1195
Eco130I	CCWWGG	2 cut(s)	101, 402
Eco24I	GRGCYC	2 cut(s)	216, 832
Eco31I	GGTCTC	2 cut(s)	467, 711
Eco47I	GGWCC	4 cut(s)	316, 497, 538, 649
Eco57I	CTGAAG	2 cut(s)	527, 588
Eco72I	CACGTG	2 cut(s)	535, 936
Eco88I	CYCGRG	2 cut(s)	298, 902
EcoO109I	RGGNCCY	2 cut(s)	497, 829
EcoRI	GAATTC	1 cut(s)	892
EcoRII	CCWGG	1 cut(s)	651
EcoT14I	CCWWGG	2 cut(s)	101, 402
EcoT22I	ATGCAT	1 cut(s)	970
EcoT38I	GRGCYC	2 cut(s)	216, 832
ErhI	CCWWGG	2 cut(s)	101, 402
FaeI	CATG	4 cut(s)	130, 251, 446, 672
FaqI	GGGAC	4 cut(s)	281, 302, 510, 1212
FatI	CATG	4 cut(s)	126, 247, 442, 668
FauI	CCCGC	1 cut(s)	14
FbaI	TGATCA	1 cut(s)	589
FblI	GTMKAC	2 cut(s)	123, 840
Fnu4HI	GCNGC	2 cut(s)	10, 363
FokI	GGATG	3 cut(s)	837, 840, 1184
FriOI	GRGCYC	2 cut(s)	216, 832
Fsp4HI	GCNGC	2 cut(s)	10, 363
FspBI	CTAG	3 cut(s)	102, 209, 236
GlaI	GCGC	2 cut(s)	136, 675
GluI	GCNGC	2 cut(s)	10, 363
GsuI	CTGGAG	2 cut(s)	212, 698
HapII	CCGG	6 cut(s)	111, 314, 482, 491, 552, 857
HgaI	GACGC	1 cut(s)	241
HhaI	GCGC	2 cut(s)	137, 676
Hin1I	GRCGYC	1 cut(s)	258
Hin1II	CATG	4 cut(s)	130, 251, 446, 672
Hin6I	GCGC	2 cut(s)	135, 674
HinP1I	GCGC	2 cut(s)	135, 674
HincII	GTYRAC	2 cut(s)	96, 124
HindII	GTYRAC	2 cut(s)	96, 124
HinfI	GANTC	5 cut(s)	80, 275, 310, 437, 696
HpaII	CCGG	6 cut(s)	111, 314, 482, 491, 552, 857
HphI	GGTGA	8 cut(s)	181, 253, 482, 656, 667, 734, 991, 1111
Hpy166II	GTNNAC	6 cut(s)	96, 124, 256, 532, 538, 841
Hpy188I	TCNGA	5 cut(s)	56, 280, 395, 568, 794
Hpy188III	TCNNGA	6 cut(s)	229, 298, 307, 811, 902, 904
Hpy8I	GTNNAC	6 cut(s)	96, 124, 256, 532, 538, 841
Hpy99I	CGWCG	7 cut(s)	35, 68, 122, 125, 152, 245, 717
HpyAV	CCTTC	3 cut(s)	25, 381, 808
HpyCH4III	ACNGT	1 cut(s)	1120
HpyCH4V	TGCA	4 cut(s)	374, 446, 968, 1070
HpyF10VI	GCNNNNNNNGC	7 cut(s)	18, 74, 83, 371, 627, 688, 857
HpyF3I	CTNAG	2 cut(s)	458, 804
Hsp92I	GRCGYC	1 cut(s)	258
Hsp92II	CATG	4 cut(s)	130, 251, 446, 672
HspAI	GCGC	2 cut(s)	135, 674
KflI	GGGWCCC	1 cut(s)	497
KroI	GCCGGC	1 cut(s)	551
KroNI	GCCGGC	1 cut(s)	553
Ksp22I	TGATCA	1 cut(s)	589
Kzo9I	GATC	5 cut(s)	88, 144, 589, 760, 807
LmnI	GCTCC	4 cut(s)	430, 627, 679, 1105
Lsp1109I	GCAGC	2 cut(s)	21, 374
LweI	GCATC	1 cut(s)	49
MabI	ACCWGGT	1 cut(s)	651
MaeI	CTAG	3 cut(s)	102, 209, 236
MaeIII	GTNAC	2 cut(s)	259, 749
MalI	GATC	5 cut(s)	90, 146, 591, 762, 809
MboI	GATC	5 cut(s)	88, 144, 589, 760, 807
MboII	GAAGA	9 cut(s)	175, 178, 526, 533, 594, 1058, 1138, 1173, 1182
MhlI	GDGCHC	3 cut(s)	216, 693, 832
MlsI	TGGCCA	1 cut(s)	155
MluCI	AATT	3 cut(s)	287, 785, 892
MluNI	TGGCCA	1 cut(s)	155
MlyI	GAGTC	2 cut(s)	89, 269
MmeI	TCCRAC	3 cut(s)	197, 219, 546
Mox20I	TGGCCA	1 cut(s)	155
Mph1103I	ATGCAT	1 cut(s)	970
MroNI	GCCGGC	1 cut(s)	551
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	2 cut(s)	269, 380
MslI	CAYNNNNRTG	1 cut(s)	747
Msp20I	TGGCCA	1 cut(s)	155
MspA1I	CMGCKG	1 cut(s)	770
MspI	CCGG	6 cut(s)	111, 314, 482, 491, 552, 857
MspR9I	CCNGG	2 cut(s)	112, 653
Mva1269I	GAATGC	1 cut(s)	970
MvaI	CCWGG	1 cut(s)	653
MwoI	GCNNNNNNNGC	7 cut(s)	18, 74, 83, 371, 627, 688, 857
NaeI	GCCGGC	1 cut(s)	553
NciI	CCSGG	1 cut(s)	112
NdeII	GATC	5 cut(s)	88, 144, 589, 760, 807
NgoMIV	GCCGGC	1 cut(s)	551
NheI	GCTAGC	1 cut(s)	235
NlaIII	CATG	4 cut(s)	130, 251, 446, 672
NmeAIII	GCCGAG	1 cut(s)	103
NmuCI	GTSAC	2 cut(s)	259, 749
NsiI	ATGCAT	1 cut(s)	970
NspI	RCATGY	1 cut(s)	672
OliI	CACNNNNGTG	1 cut(s)	747
PaeR7I	CTCGAG	1 cut(s)	902
PcsI	WCGNNNNNNNCGW	3 cut(s)	114, 156, 249
PctI	GAATGC	1 cut(s)	970
PdiI	GCCGGC	1 cut(s)	553
PfeI	GAWTC	3 cut(s)	310, 437, 696
PkrI	GCNGC	2 cut(s)	11, 364
PleI	GAGTC	2 cut(s)	88, 269
PmaCI	CACGTG	2 cut(s)	535, 936
PmlI	CACGTG	2 cut(s)	535, 936
PpsI	GAGTC	2 cut(s)	88, 269
Ppu21I	YACGTR	2 cut(s)	535, 936
PpuMI	RGGWCCY	1 cut(s)	497
Psp1406I	AACGTT	1 cut(s)	26
Psp5II	RGGWCCY	1 cut(s)	497
Psp6I	CCWGG	1 cut(s)	651
PspCI	CACGTG	2 cut(s)	535, 936
PspGI	CCWGG	1 cut(s)	651
PspOMI	GGGCCC	1 cut(s)	828
PspPI	GGNCC	8 cut(s)	316, 497, 538, 649, 717, 828, 829, 850
PspPPI	RGGWCCY	1 cut(s)	497
PsrI	GAACNNNNNNTAC	2 cut(s)	445, 477
PvuII	CAGCTG	1 cut(s)	770
RsaI	GTAC	5 cut(s)	179, 454, 947, 1039, 1117
RsaNI	GTAC	5 cut(s)	178, 453, 946, 1038, 1116
RseI	CAYNNNNRTG	1 cut(s)	747
SalI	GTCGAC	1 cut(s)	122
SaqAI	TTAA	2 cut(s)	269, 380
SatI	GCNGC	2 cut(s)	10, 363
Sau3AI	GATC	5 cut(s)	88, 144, 589, 760, 807
Sau96I	GGNCC	8 cut(s)	316, 497, 538, 649, 717, 828, 829, 850
ScaI	AGTACT	2 cut(s)	1039, 1117
SchI	GAGTC	2 cut(s)	89, 269
ScrFI	CCNGG	2 cut(s)	112, 653
SduI	GDGCHC	3 cut(s)	216, 693, 832
SexAI	ACCWGGT	1 cut(s)	651
SfaNI	GCATC	1 cut(s)	49
SfcI	CTRYAG	1 cut(s)	765
SfiI	GGCCNNNNNGGCC	1 cut(s)	857
Sfr274I	CTCGAG	1 cut(s)	902
SinI	GGWCC	4 cut(s)	316, 497, 538, 649
SlaI	CTCGAG	1 cut(s)	902
SmiMI	CAYNNNNRTG	1 cut(s)	747
SmlI	CTYRAG	1 cut(s)	902
SmoI	CTYRAG	1 cut(s)	902
Sse9I	AATT	3 cut(s)	287, 785, 892
SsiI	CCGC	1 cut(s)	7
SspMI	CTAG	3 cut(s)	102, 209, 236
StyD4I	CCNGG	2 cut(s)	110, 651
StyI	CCWWGG	2 cut(s)	101, 402
TaaI	ACNGT	1 cut(s)	1120
TaqI	TCGA	4 cut(s)	33, 123, 147, 903
TasI	AATT	3 cut(s)	287, 785, 892
TatI	WGTACW	2 cut(s)	1037, 1115
TfiI	GAWTC	3 cut(s)	310, 437, 696
Tru1I	TTAA	2 cut(s)	269, 380
Tru9I	TTAA	2 cut(s)	269, 380
TscAI	CASTG	3 cut(s)	754, 1015, 1030
TseFI	GTSAC	2 cut(s)	259, 749
TseI	GCWGC	2 cut(s)	9, 362
Tsp45I	GTSAC	2 cut(s)	259, 749
TspDTI	ATGAA	5 cut(s)	540, 798, 977, 1022, 1182
TspGWI	ACGGA	2 cut(s)	588, 811
TspRI	CASTG	3 cut(s)	754, 1015, 1030
VpaK11BI	GGWCC	4 cut(s)	316, 497, 538, 649
XapI	RAATTY	2 cut(s)	785, 892
XceI	RCATGY	1 cut(s)	672
XcmI	CCANNNNNNNNNTGG	3 cut(s)	409, 860, 933
XhoI	CTCGAG	1 cut(s)	902
XmaJI	CCTAGG	1 cut(s)	101
XmiI	GTMKAC	2 cut(s)	123, 840
XspI	CTAG	3 cut(s)	102, 209, 236
ZraI	GACGTC	1 cut(s)	259
ZrmI	AGTACT	2 cut(s)	1039, 1117
Zsp2I	ATGCAT	1 cut(s)	970

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.