Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

72486429 .. 72487841

Gene Structure 1413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG502200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGAAGGAACCTAGAGAGTTGGTCTTCATCACAGCCCCAGGTATTGGCCATCTCGTATCAACCGTCGAGATTGCAAAGCTCCTTGTTGATCGAGATGACCAAATTTTCGTCACAATTCTCATAATGAAGTTTCCCTTTGACGACTCCAACACCAAAGGTTCTGAAGAAGACTACTACTCCTCCATTTCACCGCGCATCAAGTTCATGAGCCTCCCAGAGCTCAACATAGACACAAAAGGAATGGGACCTTCCGCCTTCTTCAAAATATTTGTTGAAAATCAGAAACCTAACGTTACAGACTTGGTCACCAAACTCACCGAGTCTCAGTCCGAGTCCAAGCCTCGACTCGCCGGGTTTGTCATTGACATGTTCTGCACTACCATGATCGATGTGGCCAATGAATTTGGGGTTCCTACTTACGTTTTCTTCACGTCCAACGCAGCGTGTCTTGGGTTCTTTCTACACCTCCAAGCCATTTGTGATGAGGAAAACAAGGACGTTTCCGAGTTCTTGGAGTCGGGGGCCGATTTATCTCTGCCGAGTTTTATCAATCCGCTGCCTCATGGAGTTTTGACTAGTGTTTTTCCAGACAAGGTGGGCGCCCATGCATTCCTCAACCATGCAAGAAGGTTTAGAGAAACCAAGGGTATTTTGGTAAACACGTTCTTGGAGTTGGAGTCACATGCTTTGCACTCTCTTTCCGATGGTAAAGTCCCGCCGGTGTACCCCGTGGGGCCCTTACTGAACTTGAAAAATGATGATGACCAACCGAAGTCCGATATCTTGGAGTGGCTTGAGGATCAGCCTCCCTTATCTGTAGTGTTCCTGTGCTTCGGGAGCATGGGAAGTTTTGCTGAGGATCAGGTGAAAGAGATAGCGTGTGCGTTGGAGCAAAGTGGATATCGGTTCTTGTGGTCCTTACGTCAGCCCCCACCAAAGGAACAACAATTGAATGCCTTTGGGCTGGTGAGGGAATTGGAATTGGCCGTGGAAGTTGACATGAACTATCAGAAAGATGGTCAAGTGGTTTTGAGTGCACAAGTCATAGAGAAAGGGATAAGGCAAGTGATGGAGCAGGATAGTGATATAAGGAAAAAGGTTAAAGAGACGAGTGAAAAGGGCAGGAAAGCTTTAGCAGGTGGGTCATCACACTCTTCATTAGGTCATTTTATTGATCAGATAATTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

396

Amino Acids

44.16

Weight (kDa)

4.97

Isoelectric Point (pI)

41.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1127
Acc36I	ACCTGC	1 cut(s)	1127
AccB1I	GGYRCC	1 cut(s)	599
AccB7I	CCANNNNNTGG	1 cut(s)	44
AccII	CGCG	1 cut(s)	193
AciI	CCGC	4 cut(s)	191, 252, 554, 716
AclI	AACGTT	1 cut(s)	291
AclWI	GGATC	2 cut(s)	807, 867
AcoI	YGGCCR	3 cut(s)	46, 393, 984
AcsI	RAATTY	2 cut(s)	102, 401
AcuI	CTGAAG	1 cut(s)	183
AcyI	GRCGYC	1 cut(s)	600
AfaI	GTAC	1 cut(s)	725
AfiI	CCNNNNNNNGG	2 cut(s)	44, 937
AflIII	ACRYGT	2 cut(s)	366, 660
AgsI	TTSAA	4 cut(s)	262, 275, 751, 952
AhlI	ACTAGT	1 cut(s)	575
AjiI	CACGTC	1 cut(s)	432
AjnI	CCWGG	1 cut(s)	37
AluBI	AGCT	3 cut(s)	79, 220, 1130
AluI	AGCT	3 cut(s)	79, 220, 1130
Alw21I	GWGCWC	2 cut(s)	222, 1039
Alw26I	GTCTC	2 cut(s)	327, 1100
Alw44I	GTGCAC	1 cut(s)	1035
AlwI	GGATC	2 cut(s)	807, 867
AoxI	GGCC	5 cut(s)	46, 393, 522, 734, 984
ApaI	GGGCCC	1 cut(s)	738
ApaLI	GTGCAC	1 cut(s)	1035
ApeKI	GCWGC	2 cut(s)	440, 556
ApoI	RAATTY	2 cut(s)	102, 401
ArsI	GACNNNNNNTTYG	2 cut(s)	89, 121
AspLEI	GCGC	2 cut(s)	195, 602
AspS9I	GGNCC	5 cut(s)	245, 522, 734, 735, 915
AsuC2I	CCSGG	1 cut(s)	352
AsuHPI	GGTGA	5 cut(s)	180, 298, 307, 877, 979
AvaII	GGWCC	2 cut(s)	245, 915
BaeGI	GKGCMC	2 cut(s)	738, 1039
BalI	TGGCCA	2 cut(s)	48, 395
BanI	GGYRCC	1 cut(s)	599
BanII	GRGCYC	2 cut(s)	222, 738
BbsI	GAAGAC	2 cut(s)	16, 174
Bbv12I	GWGCWC	2 cut(s)	222, 1039
BbvCI	CCTCAGC	1 cut(s)	855
BbvI	GCAGC	2 cut(s)	452, 543
BccI	CCATC	4 cut(s)	57, 698, 1010, 1063
BceAI	ACGGC	1 cut(s)	971
BciT130I	CCWGG	1 cut(s)	39
BclI	TGATCA	1 cut(s)	1174
BcnI	CCSGG	1 cut(s)	352
BcoDI	GTCTC	2 cut(s)	327, 1100
BcuI	ACTAGT	1 cut(s)	575
BfaI	CTAG	2 cut(s)	12, 576
BfmI	CTRYAG	1 cut(s)	816
BfoI	RGCGCY	1 cut(s)	603
BfuAI	ACCTGC	1 cut(s)	1127
BisI	GCNGC	2 cut(s)	441, 557
BlsI	GCNGC	2 cut(s)	442, 558
Bme1390I	CCNGG	2 cut(s)	39, 352
Bme18I	GGWCC	2 cut(s)	245, 915
BmgBI	CACGTC	1 cut(s)	432
BmgT120I	GGNCC	5 cut(s)	245, 522, 734, 735, 915
BmiI	GGNNCC	7 cut(s)	9, 246, 411, 523, 601, 735, 736
BmrFI	CCNGG	2 cut(s)	39, 352
BmsI	GCATC	1 cut(s)	204
BpiI	GAAGAC	2 cut(s)	16, 174
Bpu10I	CCTNAGC	1 cut(s)	855
BpuEI	CTTGAG	1 cut(s)	815
BpuMI	CCSGG	1 cut(s)	352
Bsa29I	ATCGAT	1 cut(s)	387
BsaHI	GRCGYC	1 cut(s)	600
BsaJI	CCNNGG	4 cut(s)	37, 642, 729, 987
BsaXI	ACNNNNNCTCC	6 cut(s)	161, 164, 191, 194, 662, 692
Bsc4I	CCNNNNNNNGG	2 cut(s)	44, 937
Bse118I	RCCGGY	1 cut(s)	718
BseBI	CCWGG	1 cut(s)	39
BseCI	ATCGAT	1 cut(s)	387
BseDI	CCNNGG	4 cut(s)	37, 642, 729, 987
BseLI	CCNNNNNNNGG	2 cut(s)	44, 937
BseMII	CTCAG	2 cut(s)	338, 846
BseRI	GAGGAG	1 cut(s)	169
BseSI	GKGCMC	2 cut(s)	738, 1039
BseXI	GCAGC	2 cut(s)	452, 543
BsgI	GTGCAG	1 cut(s)	358
Bsh1236I	CGCG	1 cut(s)	193
BshFI	GGCC	5 cut(s)	48, 395, 524, 736, 986
BshNI	GGYRCC	1 cut(s)	599
BshVI	ATCGAT	1 cut(s)	387
BsiHKAI	GWGCWC	2 cut(s)	222, 1039
BsiSI	CCGG	2 cut(s)	351, 719
BslFI	GGGAC	2 cut(s)	258, 698
BslI	CCNNNNNNNGG	2 cut(s)	44, 937
BsmAI	GTCTC	2 cut(s)	327, 1100
BsmBI	CGTCTC	1 cut(s)	1100
BsmFI	GGGAC	2 cut(s)	258, 698
BsmI	GAATGC	2 cut(s)	608, 958
BsnI	GGCC	5 cut(s)	48, 395, 524, 736, 986
Bsp120I	GGGCCC	1 cut(s)	734
Bsp1286I	GDGCHC	3 cut(s)	222, 738, 1039
Bsp143I	GATC	5 cut(s)	88, 384, 799, 859, 1174
BspACI	CCGC	4 cut(s)	191, 252, 554, 716
BspANI	GGCC	5 cut(s)	48, 395, 524, 736, 986
BspCNI	CTCAG	2 cut(s)	337, 847
BspDI	ATCGAT	1 cut(s)	387
BspFNI	CGCG	1 cut(s)	193
BspHI	TCATGA	1 cut(s)	204
BspLI	GGNNCC	7 cut(s)	9, 246, 411, 523, 601, 735, 736
BspMI	ACCTGC	1 cut(s)	1127
BspPI	GGATC	2 cut(s)	807, 867
BspT107I	GGYRCC	1 cut(s)	599
BsrFI	RCCGGY	1 cut(s)	718
BssAI	RCCGGY	1 cut(s)	718
BssECI	CCNNGG	4 cut(s)	37, 642, 729, 987
BssMI	GATC	5 cut(s)	88, 384, 799, 859, 1174
BssNI	GRCGYC	1 cut(s)	600
BssT1I	CCWWGG	1 cut(s)	642
Bst2UI	CCWGG	1 cut(s)	39
Bst4CI	ACNGT	1 cut(s)	64
Bst6I	CTCTTC	1 cut(s)	1159
BstACI	GRCGYC	1 cut(s)	600
BstDEI	CTNAG	2 cut(s)	324, 855
BstDSI	CCRYGG	2 cut(s)	729, 987
BstEII	GGTNACC	1 cut(s)	304
BstFNI	CGCG	1 cut(s)	193
BstH2I	RGCGCY	1 cut(s)	603
BstHHI	GCGC	2 cut(s)	195, 602
BstKTI	GATC	5 cut(s)	91, 387, 802, 862, 1177
BstMAI	GTCTC	2 cut(s)	327, 1100
BstMBI	GATC	5 cut(s)	88, 384, 799, 859, 1174
BstMWI	GCNNNNNNNGC	1 cut(s)	837
BstNI	CCWGG	1 cut(s)	39
BstNSI	RCATGY	2 cut(s)	370, 686
BstPI	GGTNACC	1 cut(s)	304
BstSCI	CCNGG	2 cut(s)	37, 350
BstSFI	CTRYAG	1 cut(s)	816
BstSLI	GKGCMC	2 cut(s)	738, 1039
BstUI	CGCG	1 cut(s)	193
BstV1I	GCAGC	2 cut(s)	452, 543
BstV2I	GAAGAC	2 cut(s)	16, 174
Bsu15I	ATCGAT	1 cut(s)	387
BsuRI	GGCC	5 cut(s)	48, 395, 524, 736, 986
BsuTUI	ATCGAT	1 cut(s)	387
BtgI	CCRYGG	2 cut(s)	729, 987
BtrI	CACGTC	1 cut(s)	432
BveI	ACCTGC	1 cut(s)	1127
CciI	TCATGA	1 cut(s)	204
CfoI	GCGC	2 cut(s)	195, 602
Cfr10I	RCCGGY	1 cut(s)	718
Cfr13I	GGNCC	5 cut(s)	245, 522, 734, 735, 915
ClaI	ATCGAT	1 cut(s)	387
Csp6I	GTAC	1 cut(s)	724
CviAII	CATG	9 cut(s)	205, 367, 382, 563, 605, 620, 683, 841, 1000
CviQI	GTAC	1 cut(s)	724
DdeI	CTNAG	2 cut(s)	324, 855
DinI	GGCGCC	1 cut(s)	601
DpnI	GATC	5 cut(s)	90, 386, 801, 861, 1176
DpnII	GATC	5 cut(s)	88, 384, 799, 859, 1174
EaeI	YGGCCR	3 cut(s)	46, 393, 984
Eam1104I	CTCTTC	1 cut(s)	1159
EarI	CTCTTC	1 cut(s)	1159
EciI	GGCGGA	1 cut(s)	241
Ecl136II	GAGCTC	1 cut(s)	220
Eco130I	CCWWGG	1 cut(s)	642
Eco24I	GRGCYC	2 cut(s)	222, 738
Eco32I	GATATC	2 cut(s)	781, 902
Eco47I	GGWCC	2 cut(s)	245, 915
Eco53kI	GAGCTC	1 cut(s)	220
Eco57I	CTGAAG	1 cut(s)	183
Eco91I	GGTNACC	1 cut(s)	304
EcoICRI	GAGCTC	1 cut(s)	220
EcoO109I	RGGNCCY	3 cut(s)	245, 734, 735
EcoO65I	GGTNACC	1 cut(s)	304
EcoRII	CCWGG	1 cut(s)	37
EcoRV	GATATC	2 cut(s)	781, 902
EcoT14I	CCWWGG	1 cut(s)	642
EcoT22I	ATGCAT	1 cut(s)	610
EcoT38I	GRGCYC	2 cut(s)	222, 738
EgeI	GGCGCC	1 cut(s)	601
EheI	GGCGCC	1 cut(s)	601
ErhI	CCWWGG	1 cut(s)	642
Esp3I	CGTCTC	1 cut(s)	1100
FaeI	CATG	9 cut(s)	208, 370, 385, 566, 608, 623, 686, 844, 1003
FalI	AAGNNNNNCTT	2 cut(s)	119, 151
FaqI	GGGAC	2 cut(s)	258, 698
FatI	CATG	9 cut(s)	204, 366, 381, 562, 604, 619, 682, 840, 999
FauI	CCCGC	1 cut(s)	723
FbaI	TGATCA	1 cut(s)	1174
Fnu4HI	GCNGC	2 cut(s)	441, 557
FriOI	GRGCYC	2 cut(s)	222, 738
Fsp4HI	GCNGC	2 cut(s)	441, 557
FspBI	CTAG	2 cut(s)	12, 576
GlaI	GCGC	2 cut(s)	194, 601
GluI	GCNGC	2 cut(s)	441, 557
HaeII	RGCGCY	1 cut(s)	603
HaeIII	GGCC	5 cut(s)	48, 395, 524, 736, 986
HapII	CCGG	2 cut(s)	351, 719
HhaI	GCGC	2 cut(s)	195, 602
Hin1I	GRCGYC	1 cut(s)	600
Hin1II	CATG	9 cut(s)	208, 370, 385, 566, 608, 623, 686, 844, 1003
Hin6I	GCGC	2 cut(s)	193, 600
HinP1I	GCGC	2 cut(s)	193, 600
HincII	GTYRAC	1 cut(s)	997
HindII	GTYRAC	1 cut(s)	997
HindIII	AAGCTT	1 cut(s)	1128
HinfI	GANTC	6 cut(s)	143, 320, 332, 345, 515, 677
HpaII	CCGG	2 cut(s)	351, 719
HphI	GGTGA	5 cut(s)	180, 298, 307, 877, 979
Hpy166II	GTNNAC	4 cut(s)	658, 724, 997, 1037
Hpy188I	TCNGA	8 cut(s)	163, 282, 331, 505, 703, 778, 1011, 1179
Hpy188III	TCNNGA	5 cut(s)	67, 92, 205, 587, 835
Hpy8I	GTNNAC	4 cut(s)	658, 724, 997, 1037
Hpy99I	CGWCG	1 cut(s)	68
HpyAV	CCTTC	3 cut(s)	258, 265, 621
HpyCH4III	ACNGT	1 cut(s)	64
HpyCH4IV	ACGT	6 cut(s)	291, 420, 431, 498, 662, 922
HpyCH4V	TGCA	6 cut(s)	74, 375, 608, 623, 691, 1037
HpyF10VI	GCNNNNNNNGC	1 cut(s)	837
HpyF3I	CTNAG	2 cut(s)	324, 855
HpySE526I	ACGT	6 cut(s)	291, 420, 431, 498, 662, 922
Hsp92I	GRCGYC	1 cut(s)	600
Hsp92II	CATG	9 cut(s)	208, 370, 385, 566, 608, 623, 686, 844, 1003
HspAI	GCGC	2 cut(s)	193, 600
KasI	GGCGCC	1 cut(s)	599
Ksp22I	TGATCA	1 cut(s)	1174
Kzo9I	GATC	5 cut(s)	88, 384, 799, 859, 1174
LmnI	GCTCC	4 cut(s)	84, 837, 889, 1072
Lsp1109I	GCAGC	2 cut(s)	452, 543
LweI	GCATC	1 cut(s)	204
MaeI	CTAG	2 cut(s)	12, 576
MaeII	ACGT	6 cut(s)	291, 420, 431, 498, 662, 922
MaeIII	GTNAC	4 cut(s)	109, 292, 304, 678
MalI	GATC	5 cut(s)	90, 386, 801, 861, 1176
MboI	GATC	5 cut(s)	88, 384, 799, 859, 1174
MboII	GAAGA	6 cut(s)	16, 176, 179, 250, 418, 1146
MfeI	CAATTG	1 cut(s)	947
MhlI	GDGCHC	3 cut(s)	222, 738, 1039
MlsI	TGGCCA	2 cut(s)	48, 395
MluCI	AATT	7 cut(s)	102, 114, 401, 947, 974, 980, 1182
MluNI	TGGCCA	2 cut(s)	48, 395
Mly113I	GGCGCC	1 cut(s)	600
MlyI	GAGTC	6 cut(s)	137, 329, 339, 341, 524, 686
MmeI	TCCRAC	4 cut(s)	171, 459, 654, 867
Mox20I	TGGCCA	2 cut(s)	48, 395
Mph1103I	ATGCAT	1 cut(s)	610
MscI	TGGCCA	2 cut(s)	48, 395
MseI	TTAA	2 cut(s)	1101, 1189
MslI	CAYNNNNRTG	2 cut(s)	365, 380
Msp20I	TGGCCA	2 cut(s)	48, 395
MspA1I	CMGCKG	1 cut(s)	556
MspI	CCGG	2 cut(s)	351, 719
MspR9I	CCNGG	2 cut(s)	39, 352
MunI	CAATTG	1 cut(s)	947
Mva1269I	GAATGC	2 cut(s)	608, 958
MvaI	CCWGG	1 cut(s)	39
MvnI	CGCG	1 cut(s)	193
MwoI	GCNNNNNNNGC	1 cut(s)	837
NarI	GGCGCC	1 cut(s)	600
NciI	CCSGG	1 cut(s)	352
NdeII	GATC	5 cut(s)	88, 384, 799, 859, 1174
NlaIII	CATG	9 cut(s)	208, 370, 385, 566, 608, 623, 686, 844, 1003
NlaIV	GGNNCC	7 cut(s)	9, 246, 411, 523, 601, 735, 736
NmeAIII	GCCGAG	1 cut(s)	564
NmuCI	GTSAC	3 cut(s)	109, 304, 678
NsiI	ATGCAT	1 cut(s)	610
NspI	RCATGY	2 cut(s)	370, 686
PagI	TCATGA	1 cut(s)	204
PaqCI	CACCTGC	1 cut(s)	1127
PciI	ACATGT	1 cut(s)	366
PcsI	WCGNNNNNNNCGW	1 cut(s)	60
PctI	GAATGC	2 cut(s)	608, 958
PflFI	GACNNNGTC	1 cut(s)	302
PflMI	CCANNNNNTGG	1 cut(s)	44
PkrI	GCNGC	2 cut(s)	442, 558
PleI	GAGTC	6 cut(s)	137, 328, 339, 340, 523, 685
PluTI	GGCGCC	1 cut(s)	603
PpsI	GAGTC	6 cut(s)	137, 328, 339, 340, 523, 685
PpuMI	RGGWCCY	1 cut(s)	245
PscI	ACATGT	1 cut(s)	366
Psp124BI	GAGCTC	1 cut(s)	222
Psp1406I	AACGTT	1 cut(s)	291
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	1 cut(s)	37
PspEI	GGTNACC	1 cut(s)	304
PspGI	CCWGG	1 cut(s)	37
PspN4I	GGNNCC	7 cut(s)	9, 246, 411, 523, 601, 735, 736
PspOMI	GGGCCC	1 cut(s)	734
PspPI	GGNCC	5 cut(s)	245, 522, 734, 735, 915
PspPPI	RGGWCCY	1 cut(s)	245
PsyI	GACNNNGTC	1 cut(s)	302
RsaI	GTAC	1 cut(s)	725
RsaNI	GTAC	1 cut(s)	724
RseI	CAYNNNNRTG	2 cut(s)	365, 380
SacI	GAGCTC	1 cut(s)	222
SaqAI	TTAA	2 cut(s)	1101, 1189
SatI	GCNGC	2 cut(s)	441, 557
Sau3AI	GATC	5 cut(s)	88, 384, 799, 859, 1174
Sau96I	GGNCC	5 cut(s)	245, 522, 734, 735, 915
SchI	GAGTC	6 cut(s)	137, 329, 339, 341, 524, 686
ScrFI	CCNGG	2 cut(s)	39, 352
SduI	GDGCHC	3 cut(s)	222, 738, 1039
SfaNI	GCATC	1 cut(s)	204
SfcI	CTRYAG	1 cut(s)	816
SfoI	GGCGCC	1 cut(s)	601
SgrAI	CRCCGGYG	1 cut(s)	718
SinI	GGWCC	2 cut(s)	245, 915
SmiMI	CAYNNNNRTG	2 cut(s)	365, 380
SmlI	CTYRAG	1 cut(s)	794
SmoI	CTYRAG	1 cut(s)	794
SpeI	ACTAGT	1 cut(s)	575
Sse9I	AATT	7 cut(s)	102, 114, 401, 947, 974, 980, 1182
SsiI	CCGC	4 cut(s)	191, 252, 554, 716
SspDI	GGCGCC	1 cut(s)	599
SspI	AATATT	1 cut(s)	267
SspMI	CTAG	2 cut(s)	12, 576
SstI	GAGCTC	1 cut(s)	222
StyD4I	CCNGG	2 cut(s)	37, 350
StyI	CCWWGG	1 cut(s)	642
TaaI	ACNGT	1 cut(s)	64
TaiI	ACGT	6 cut(s)	294, 423, 434, 501, 665, 925
TaqI	TCGA	4 cut(s)	66, 91, 343, 387
TasI	AATT	7 cut(s)	102, 114, 401, 947, 974, 980, 1182
Tru1I	TTAA	2 cut(s)	1101, 1189
Tru9I	TTAA	2 cut(s)	1101, 1189
TseFI	GTSAC	3 cut(s)	109, 304, 678
TseI	GCWGC	2 cut(s)	440, 556
Tsp45I	GTSAC	3 cut(s)	109, 304, 678
TspDTI	ATGAA	7 cut(s)	16, 17, 140, 193, 414, 1016, 1146
Tth111I	GACNNNGTC	1 cut(s)	302
Van91I	CCANNNNNTGG	1 cut(s)	44
VneI	GTGCAC	1 cut(s)	1035
VpaK11BI	GGWCC	2 cut(s)	245, 915
XapI	RAATTY	2 cut(s)	102, 401
XceI	RCATGY	2 cut(s)	370, 686
XcmI	CCANNNNNNNNNTGG	2 cut(s)	388, 649
XspI	CTAG	2 cut(s)	12, 576
Zsp2I	ATGCAT	1 cut(s)	610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.